AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174800 MtrunA17_Chr1g0195611 92.412 514 39 0 2 515 1 514 0.0 1009
Msa0174800 MtrunA17_Chr5g0428831 92.233 515 39 1 2 515 1 515 0.0 999
Msa0174800 MtrunA17_Chr1g0195641 91.283 413 35 1 2 414 1 412 0.0 778
Msa0174800 MtrunA17_Chr4g0006971 59.877 486 189 4 28 509 27 510 0.0 610
Msa0174800 MtrunA17_Chr7g0242681 59.100 489 195 4 29 514 39 525 0.0 603
Msa0174800 MtrunA17_Chr7g0242691 57.200 500 208 4 20 514 21 519 0.0 597
Msa0174800 MtrunA17_Chr4g0043091 44.444 504 257 7 7 492 7 505 1.24e-156 456
Msa0174800 MtrunA17_Chr4g0033311 46.012 489 236 11 22 489 33 514 1.43e-142 421
Msa0174800 MtrunA17_Chr6g0482131 44.064 497 244 9 19 489 23 511 2.50e-139 412
Msa0174800 MtrunA17_Chr2g0329201 43.000 500 262 9 10 489 10 506 3.90e-138 408
Msa0174800 MtrunA17_Chr2g0317821 42.231 502 271 8 5 491 9 506 7.86e-138 408
Msa0174800 MtrunA17_Chr4g0033271 43.984 507 255 10 10 491 10 512 3.52e-137 406
Msa0174800 MtrunA17_Chr3g0087261 42.887 478 249 7 28 488 37 507 1.11e-136 405
Msa0174800 MtrunA17_Chr2g0317841 41.633 502 274 8 5 491 9 506 2.72e-136 404
Msa0174800 MtrunA17_Chr2g0329191 43.505 485 253 8 22 489 28 508 3.01e-136 404
Msa0174800 MtrunA17_Chr4g0033341 44.856 486 242 9 23 489 64 542 5.64e-136 404
Msa0174800 MtrunA17_Chr4g0033321 44.699 481 238 8 29 488 34 507 1.41e-135 402
Msa0174800 MtrunA17_Chr6g0482081 43.522 494 252 9 19 489 23 512 2.03e-135 402
Msa0174800 MtrunA17_Chr4g0033191 43.121 487 247 9 27 491 42 520 5.46e-135 401
Msa0174800 MtrunA17_Chr6g0482951 42.157 510 265 9 3 488 7 510 5.84e-135 400
Msa0174800 MtrunA17_Chr4g0033331 44.148 487 244 9 23 488 34 513 1.10e-134 400
Msa0174800 MtrunA17_Chr3g0088441 43.149 489 250 10 22 489 32 513 1.68e-134 400
Msa0174800 MtrunA17_Chr6g0482941 42.353 510 264 9 3 488 7 510 2.84e-134 399
Msa0174800 MtrunA17_Chr4g0033401 44.491 481 239 8 29 488 35 508 3.66e-134 399
Msa0174800 MtrunA17_Chr4g0033201 41.929 508 262 8 11 489 8 511 2.48e-133 396
Msa0174800 MtrunA17_Chr4g0010501 43.313 501 248 9 8 489 10 493 2.14e-132 393
Msa0174800 MtrunA17_Chr4g0042171 40.234 512 283 9 9 503 8 513 1.19e-131 392
Msa0174800 MtrunA17_Chr6g0482071 41.811 519 263 10 10 494 4 517 6.75e-131 390
Msa0174800 MtrunA17_Chr3g0090131 42.589 479 246 8 26 489 19 483 9.13e-130 386
Msa0174800 MtrunA17_Chr3g0087271 42.017 476 256 7 28 488 38 508 4.49e-129 385
Msa0174800 MtrunA17_Chr4g0074561 41.300 477 253 10 33 488 40 510 4.40e-126 378
Msa0174800 MtrunA17_Chr3g0090111 41.807 476 247 10 29 489 20 480 1.75e-125 375
Msa0174800 MtrunA17_Chr4g0074551 39.286 504 285 8 10 496 31 530 5.45e-124 374
Msa0174800 MtrunA17_Chr2g0288071 39.448 507 280 10 10 495 47 547 3.50e-123 372
Msa0174800 MtrunA17_Chr2g0329321 40.787 483 244 8 22 489 32 487 2.68e-122 367
Msa0174800 MtrunA17_Chr2g0288021 39.479 499 278 8 8 488 15 507 2.01e-121 366
Msa0174800 MtrunA17_Chr4g0033231 40.377 478 239 7 30 489 43 492 1.90e-120 362
Msa0174800 MtrunA17_Chr4g0033261 40.166 483 235 8 29 489 42 492 1.41e-118 358
Msa0174800 MtrunA17_Chr5g0418871 50.303 330 158 5 49 373 4 332 1.08e-110 332
Msa0174800 MtrunA17_Chr5g0430451 38.710 496 253 8 18 489 29 497 2.38e-109 334
Msa0174800 MtrunA17_Chr4g0006131 36.885 488 257 7 29 492 43 503 6.50e-107 328
Msa0174800 MtrunA17_Chr4g0006111 37.698 504 251 15 19 489 51 524 4.27e-105 324
Msa0174800 MtrunA17_Chr7g0234111 38.136 472 264 11 29 488 76 531 5.51e-94 296
Msa0174800 MtrunA17_Chr7g0234091 37.632 473 265 10 29 488 76 531 3.35e-93 294
Msa0174800 MtrunA17_Chr7g0234131 38.511 470 266 12 29 488 76 532 3.79e-93 293
Msa0174800 MtrunA17_Chr2g0301231 36.386 415 210 10 99 489 7 391 1.16e-80 256
Msa0174800 MtrunA17_Chr7g0230651 35.870 368 218 10 68 428 14 370 3.47e-74 239
Msa0174800 MtrunA17_Chr3g0087201 37.425 334 189 7 167 488 17 342 4.07e-69 225
Msa0174800 MtrunA17_Chr3g0087191 56.364 165 64 3 10 166 1 165 9.29e-56 184
Msa0174800 MtrunA17_Chr7g0227561 34.307 274 141 6 30 298 48 287 1.51e-49 172
Msa0174800 MtrunA17_Chr7g0236731 39.431 246 130 5 115 348 31 269 4.22e-48 168
Msa0174800 MtrunA17_Chr1g0195651 94.805 77 4 0 439 515 1 77 2.55e-45 153
Msa0174800 MtrunA17_Chr8g0352881 43.689 103 58 0 251 353 58 160 1.99e-24 99.8
Msa0174800 MtrunA17_Chr8g0352881 72.222 54 13 1 36 87 6 59 2.51e-18 82.4
Msa0174800 MtrunA17_Chr4g0068871 25.123 406 242 12 89 488 183 532 1.11e-19 92.4
Msa0174800 MtrunA17_Chr5g0418861 47.436 78 39 2 412 488 14 90 5.47e-18 79.0
Msa0174800 MtrunA17_Chr2g0288031 46.774 62 31 1 175 236 4 63 5.02e-13 63.9
Msa0174800 MtrunA17_Chr7g0227591 53.704 54 24 1 435 488 13 65 9.49e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174800 AT1G02850.2 63.753 469 169 1 23 491 21 488 0.0 645
Msa0174800 AT1G02850.5 60.772 492 169 2 23 491 21 511 0.0 634
Msa0174800 AT1G02850.4 60.649 493 169 3 23 491 21 512 0.0 629
Msa0174800 AT1G02850.1 60.554 469 157 2 23 491 21 461 0.0 601
Msa0174800 AT4G27830.1 54.418 498 208 7 2 491 1 487 0.0 560
Msa0174800 AT1G45191.4 54.582 502 209 8 1 495 1 490 0.0 553
Msa0174800 AT1G45191.2 54.092 501 219 7 1 495 1 496 0.0 546
Msa0174800 AT1G60090.2 54.175 491 211 6 11 495 7 489 0.0 546
Msa0174800 AT4G22100.1 54.930 497 205 8 7 495 4 489 0.0 545
Msa0174800 AT1G45191.6 53.557 506 219 7 1 495 1 501 0.0 545
Msa0174800 AT1G60090.1 53.162 506 200 6 11 495 7 496 0.0 542
Msa0174800 AT1G45191.1 52.519 516 221 7 1 495 1 513 0.0 541
Msa0174800 AT1G02850.3 60.988 405 134 2 23 404 21 424 0.0 529
Msa0174800 AT4G27820.1 53.715 471 209 4 25 491 20 485 0.0 525
Msa0174800 AT3G62750.1 52.049 488 211 6 12 491 4 476 2.01e-177 508
Msa0174800 AT3G62750.2 52.049 488 211 6 12 491 30 502 4.82e-177 508
Msa0174800 AT3G62740.1 50.207 484 228 7 12 491 7 481 8.61e-172 494
Msa0174800 AT4G27830.2 54.815 405 171 4 93 491 1 399 1.43e-161 465
Msa0174800 AT4G27820.2 52.357 403 185 3 93 491 1 400 4.92e-151 438
Msa0174800 AT4G27820.3 52.357 403 185 3 93 491 1 400 4.92e-151 438
Msa0174800 AT3G62750.4 50.808 433 190 6 12 436 30 447 2.50e-149 436
Msa0174800 AT1G45191.5 59.941 337 130 3 1 336 1 333 2.52e-148 431
Msa0174800 AT1G45191.3 59.941 337 130 3 1 336 1 333 3.76e-148 431
Msa0174800 AT1G26560.1 44.075 481 251 8 27 491 31 509 2.98e-146 429
Msa0174800 AT3G62740.2 49.061 426 204 7 12 433 7 423 1.40e-144 422
Msa0174800 AT1G60270.1 54.762 378 158 6 14 386 10 379 4.62e-144 419
Msa0174800 AT3G18080.1 43.451 481 252 7 23 489 34 508 6.14e-141 416
Msa0174800 AT3G62750.6 49.752 404 185 4 93 491 1 391 5.36e-139 407
Msa0174800 AT3G62750.5 49.752 404 185 4 93 491 1 391 5.36e-139 407
Msa0174800 AT2G44480.1 44.375 480 248 7 30 493 37 513 1.06e-138 410
Msa0174800 AT2G44480.3 44.375 480 248 7 30 493 68 544 2.42e-138 410
Msa0174800 AT5G54570.1 42.593 486 254 8 23 488 25 505 1.98e-137 408
Msa0174800 AT3G62750.7 56.418 335 131 3 12 343 4 326 3.37e-134 394
Msa0174800 AT3G62750.8 56.418 335 131 3 12 343 4 326 3.37e-134 394
Msa0174800 AT3G62750.3 56.250 336 132 3 12 344 30 353 3.41e-133 394
Msa0174800 AT1G61820.1 41.304 506 261 10 11 489 9 505 3.63e-130 389
Msa0174800 AT3G18070.3 41.736 484 248 8 23 489 25 491 5.07e-130 387
Msa0174800 AT3G18070.1 41.736 484 254 8 23 489 25 497 5.23e-129 385
Msa0174800 AT5G44640.1 42.656 497 263 9 10 488 9 501 9.02e-129 385
Msa0174800 AT5G42260.1 42.596 493 261 9 10 484 9 497 1.32e-126 379
Msa0174800 AT2G25630.1 41.483 499 260 9 10 494 9 489 1.71e-126 378
Msa0174800 AT2G44450.1 42.946 482 262 7 18 488 21 500 6.92e-126 377
Msa0174800 AT3G60130.1 42.380 479 252 9 30 491 32 503 3.21e-123 371
Msa0174800 AT5G36890.1 41.260 492 256 10 15 490 7 481 7.07e-123 369
Msa0174800 AT5G36890.2 41.260 492 256 10 15 490 7 481 1.07e-122 369
Msa0174800 AT5G54570.3 42.227 431 226 6 23 434 25 451 2.33e-121 363
Msa0174800 AT1G61810.1 40.632 475 260 8 33 489 38 508 3.48e-121 366
Msa0174800 AT5G24550.1 40.486 494 257 10 23 489 27 510 2.24e-120 364
Msa0174800 AT3G60140.1 38.521 514 289 13 10 504 8 513 2.28e-119 363
Msa0174800 AT5G54570.2 42.857 413 214 7 93 488 1 408 9.53e-117 352
Msa0174800 AT2G44470.3 41.300 477 260 9 30 488 31 505 1.65e-116 356
Msa0174800 AT1G61810.3 40.839 453 248 7 33 467 38 488 5.16e-116 353
Msa0174800 AT4G21760.2 38.771 472 274 6 33 493 59 526 1.89e-114 349
Msa0174800 AT4G21760.1 38.710 465 274 6 33 493 59 516 2.26e-114 348
Msa0174800 AT2G44480.2 42.754 414 221 6 93 493 1 411 9.66e-114 343
Msa0174800 AT3G60120.1 39.425 487 264 12 26 489 12 490 2.10e-113 346
Msa0174800 AT2G44490.1 39.501 481 267 11 30 489 16 493 6.49e-113 346
Msa0174800 AT5G24540.1 41.093 494 254 12 23 489 27 510 5.56e-112 342
Msa0174800 AT1G51470.1 38.703 478 271 9 24 488 41 509 6.53e-111 339
Msa0174800 AT1G47600.1 38.912 478 270 9 24 488 41 509 1.30e-110 338
Msa0174800 AT5G25980.2 38.105 496 277 9 17 491 39 525 2.71e-110 338
Msa0174800 AT1G60270.2 53.846 299 126 5 93 386 1 292 6.26e-110 328
Msa0174800 AT1G47600.2 39.121 478 268 10 24 488 41 508 8.96e-110 336
Msa0174800 AT2G44460.1 39.489 509 281 11 2 488 1 504 2.15e-108 335
Msa0174800 AT5G26000.1 36.149 509 302 8 1 491 11 514 1.73e-107 331
Msa0174800 AT2G32860.2 38.174 482 269 10 30 488 96 571 2.00e-107 333
Msa0174800 AT1G52400.3 38.447 515 281 12 5 489 8 516 2.31e-107 330
Msa0174800 AT1G52400.1 38.447 515 281 12 5 489 8 516 2.31e-107 330
Msa0174800 AT3G03640.1 36.891 534 300 12 7 507 2 531 1.02e-106 329
Msa0174800 AT2G32860.1 37.282 515 281 13 30 513 96 599 3.36e-106 330
Msa0174800 AT2G44480.4 50.502 299 141 3 29 322 67 363 4.23e-104 317
Msa0174800 AT1G66280.1 37.428 521 289 12 11 501 11 524 7.87e-104 321
Msa0174800 AT1G75940.1 39.357 498 257 14 24 488 32 517 1.54e-103 321
Msa0174800 AT1G66270.1 38.677 499 279 11 24 501 32 524 4.11e-103 319
Msa0174800 AT3G21370.1 37.271 491 276 11 24 489 29 512 5.67e-103 319
Msa0174800 AT3G60140.2 39.609 409 233 8 10 406 8 414 8.14e-103 316
Msa0174800 AT5G28510.1 38.446 502 280 16 25 501 36 533 2.89e-102 317
Msa0174800 AT3G09260.1 38.878 499 277 13 25 501 32 524 3.67e-102 317
Msa0174800 AT1G61810.5 40.196 408 225 7 97 489 5 408 5.45e-101 310
Msa0174800 AT3G18070.4 46.130 323 168 3 23 343 25 343 6.28e-100 306
Msa0174800 AT1G66270.2 38.277 499 279 12 24 501 32 522 1.20e-99 310
Msa0174800 AT3G60130.3 40.436 413 226 8 87 491 40 440 1.95e-99 307
Msa0174800 AT2G44470.1 43.005 386 208 6 30 404 31 415 8.98e-99 306
Msa0174800 AT2G44470.2 47.604 313 158 4 30 337 31 342 5.14e-98 302
Msa0174800 AT3G60130.2 39.618 419 232 8 87 491 40 451 3.29e-97 302
Msa0174800 AT1G61810.4 40.933 386 214 6 33 406 38 421 1.34e-96 299
Msa0174800 AT5G24540.2 40.732 437 224 10 23 433 27 454 5.97e-96 298
Msa0174800 AT5G25980.3 37.443 438 245 8 17 434 39 467 6.10e-95 296
Msa0174800 AT5G25980.1 37.443 438 245 8 17 434 39 467 6.10e-95 296
Msa0174800 AT5G26000.2 37.215 438 253 7 6 426 16 448 6.51e-95 296
Msa0174800 AT5G48375.1 36.508 441 207 9 24 453 34 412 5.90e-88 277
Msa0174800 AT1G61820.3 39.247 372 198 7 137 489 4 366 4.35e-87 273
Msa0174800 AT1G52400.2 36.681 458 256 10 5 433 8 460 2.45e-86 274
Msa0174800 AT5G16580.1 47.138 297 135 7 161 444 12 299 2.63e-79 250
Msa0174800 AT1G61810.2 44.867 263 139 3 33 291 38 298 3.00e-78 248
Msa0174800 AT3G18070.2 38.393 336 183 6 169 489 94 420 4.93e-74 241
Msa0174800 AT3G18070.2 46.269 67 34 1 23 87 25 91 1.97e-11 66.6
Msa0174800 AT2G44450.2 37.571 354 207 6 144 488 1 349 6.58e-73 236
Msa0174800 AT3G18070.7 37.658 316 173 6 189 489 2 308 4.04e-68 222
Msa0174800 AT1G51490.1 43.042 309 153 10 36 336 28 321 6.47e-68 224
Msa0174800 AT2G44480.5 36.452 310 183 5 195 493 1 307 6.37e-62 205
Msa0174800 AT2G44460.2 36.639 363 209 8 142 488 1 358 9.32e-61 206
Msa0174800 AT3G18070.5 36.015 261 144 5 155 404 85 333 3.78e-48 170
Msa0174800 AT3G18070.5 46.269 67 34 1 23 87 25 91 1.18e-11 66.6
Msa0174800 AT3G18070.6 35.683 227 128 4 189 404 2 221 3.85e-42 150
Msa0174800 AT3G06510.1 24.337 415 248 15 88 494 159 515 1.34e-17 86.3
Msa0174800 AT3G06510.2 24.590 427 266 17 88 494 159 549 3.31e-17 85.1

Find 155 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACATTCAAGACCCTTTA+TGG 0.120459 1_4:+60583724 Msa0174800:CDS
GCAAGTCATCTTTGGTTTCT+AGG 0.204267 1_4:+60584955 Msa0174800:three_prime_UTR
AAGGGTTCCTATGACTTTAT+TGG 0.240240 1_4:+60583211 Msa0174800:CDS
CCTATATTCATTCATGAAAA+TGG 0.260858 1_4:+60583754 Msa0174800:CDS
TGCGCCCGCATTAGCCTTCA+TGG 0.268430 1_4:-60583149 None:intergenic
CCATTCACACCATGGGCTTT+AGG 0.274157 1_4:+60583691 Msa0174800:CDS
TGGTATCTACTTCTTCGATT+TGG 0.291417 1_4:+60584801 Msa0174800:three_prime_UTR
TGCTTCTAAACTTGGCTGTT+GGG 0.299049 1_4:+60581116 Msa0174800:CDS
GGTATCTACTTCTTCGATTT+GGG 0.300895 1_4:+60584802 Msa0174800:three_prime_UTR
TCCTTCTCTGTATTTGTTTG+AGG 0.304965 1_4:-60582977 None:intergenic
GATGGATATAAATCGATCTA+TGG 0.305296 1_4:+60584411 Msa0174800:CDS
CATTGATGCATTTGAGTTGT+TGG 0.312270 1_4:+60584389 Msa0174800:CDS
AGAATTTGTTAAGATGTCTT+AGG 0.316710 1_4:-60585060 None:intergenic
TTCCAGATGCAAGTCATCTT+TGG 0.343118 1_4:+60584947 Msa0174800:three_prime_UTR
ATGGAAGAACTCCTAGCATT+TGG 0.343887 1_4:+60581322 Msa0174800:CDS
ACTACCTACAGCGAAGATAT+TGG 0.346387 1_4:-60582653 None:intergenic
GTCAGGCACCTCTGCATATC+AGG 0.349767 1_4:+60581195 Msa0174800:CDS
CATTAAAGTGTTATTACATA+TGG 0.351795 1_4:+60584618 Msa0174800:three_prime_UTR
GTGCTCTCTATAATGCAAAA+TGG 0.355210 1_4:-60582715 None:intergenic
GTGCCATGCTTGATTCCTTA+AGG 0.355644 1_4:+60584156 Msa0174800:CDS
TCTTATGTTGTTTCAAAGGT+TGG 0.359688 1_4:+60585080 Msa0174800:three_prime_UTR
TTGCTTCTAAACTTGGCTGT+TGG 0.364143 1_4:+60581115 Msa0174800:CDS
CTTATGTTGTTTCAAAGGTT+GGG 0.365772 1_4:+60585081 Msa0174800:three_prime_UTR
TCGTGAATCCGAACAAGTTA+AGG 0.366298 1_4:+60583192 Msa0174800:CDS
CTCAACATTTGAACCGTACT+TGG 0.368575 1_4:+60582747 Msa0174800:CDS
GAGGAACAAAATGGATTTGT+TGG 0.370170 1_4:+60582926 Msa0174800:CDS
TTGTAGTACTGCAATCCCTT+CGG 0.373899 1_4:-60581989 None:intergenic
GGTATCTCAATCTATACATT+GGG 0.376720 1_4:+60582947 Msa0174800:CDS
TGTAGTACTGCAATCCCTTC+GGG 0.378058 1_4:-60581988 None:intergenic
ATATAGGTGGATTGCCATAA+AGG 0.386167 1_4:-60583738 None:intergenic
TGGACATTTACTTCAGTAGT+AGG 0.389081 1_4:+60584578 Msa0174800:exon
ATCAATGAACTCATTAGAAA+TGG 0.390504 1_4:+60582019 Msa0174800:CDS
TGGAAAATCTATAGGCTTCA+AGG 0.392213 1_4:-60581799 None:intergenic
GGGTTTGCCCGTGGAGGAAA+TGG 0.393149 1_4:+60581637 Msa0174800:intron
ACCCAAAGCTATCCGCAAAA+TGG 0.396995 1_4:+60584475 Msa0174800:CDS
CTACCTACAGCGAAGATATT+GGG 0.398761 1_4:-60582652 None:intergenic
CCAAGAAATGGAAAATCTAT+AGG 0.402931 1_4:-60581807 None:intergenic
TCTTGTTTACCTTGTATTTG+TGG 0.405045 1_4:-60581681 None:intergenic
TCGCATAGTTCACGCATAGA+TGG 0.406665 1_4:-60585011 None:intergenic
GTGCAGCTCATGCTTGAAAC+AGG 0.412834 1_4:+60581776 Msa0174800:CDS
GCATTAGCCTTCATGGAATC+AGG 0.416794 1_4:-60583142 None:intergenic
ATAGGAACCCTTAACTTGTT+CGG 0.417408 1_4:-60583200 None:intergenic
TGGAAGAACTCCTAGCATTT+GGG 0.419701 1_4:+60581323 Msa0174800:CDS
AATTATGCCAATAAAGTCAT+AGG 0.425994 1_4:-60583218 None:intergenic
TCAAGTGAAGTACTCAACTA+TGG 0.426534 1_4:-60585165 None:intergenic
TGGTGCTATTGAGCTCAATA+AGG 0.430175 1_4:+60584536 Msa0174800:CDS
TATCAATCTTGACCAAGAAA+TGG 0.432438 1_4:-60581819 None:intergenic
CTGCAATCCCTTCGGGTTGA+CGG 0.436534 1_4:-60581981 None:intergenic
GAAAGTGATACTATAGTTCA+TGG 0.445064 1_4:+60585103 Msa0174800:three_prime_UTR
GTATTTGTGGTACGTGTCGC+AGG 0.445916 1_4:-60581668 None:intergenic
GTAGTCATGACTAACTCTAA+TGG 0.448022 1_4:+60584867 Msa0174800:three_prime_UTR
ACATTGCAGGAGGAACAAAA+TGG 0.450976 1_4:+60582917 Msa0174800:intron
TGCAATCCCTTCGGGTTGAC+GGG 0.451654 1_4:-60581980 None:intergenic
AACCAAAGATGACTTGCATC+TGG 0.453002 1_4:-60584949 None:intergenic
CGTGAATCCGAACAAGTTAA+GGG 0.454889 1_4:+60583193 Msa0174800:CDS
TCAGAAATGGATCAAATATG+AGG 0.455269 1_4:+60584346 Msa0174800:intron
AGTAAAAGACAACACCGAAT+TGG 0.467533 1_4:-60580978 None:intergenic
CATCACTTCATGATGAATCA+AGG 0.468195 1_4:+60584108 Msa0174800:CDS
TGTGTAGTGTGACATGTGGT+TGG 0.469782 1_4:-60582172 None:intergenic
AAATTCTTATGTTGTTTCAA+AGG 0.476031 1_4:+60585076 Msa0174800:three_prime_UTR
TGGGATACCTTTGCACATGC+TGG 0.477610 1_4:+60581342 Msa0174800:CDS
CCTAAAGCCCATGGTGTGAA+TGG 0.479060 1_4:-60583691 None:intergenic
TGCATACACAGATGGAATAG+TGG 0.485139 1_4:-60584745 None:intergenic
GCTTCTAAACTTGGCTGTTG+GGG 0.486481 1_4:+60581117 Msa0174800:CDS
ATGGAACACATCTATGTTTG+AGG 0.488280 1_4:+60581017 Msa0174800:five_prime_UTR
TTTGGGTATCTTCTCAACTC+TGG 0.491607 1_4:-60584459 None:intergenic
TATAGGTGGATTGCCATAAA+GGG 0.493904 1_4:-60583737 None:intergenic
GCAGGTGTAGAGGAAATACT+TGG 0.494686 1_4:+60583558 Msa0174800:intron
TATTTCTTCCCAGATGGTAG+AGG 0.495507 1_4:+60581956 Msa0174800:intron
ATAAGTCAGAACCACCAATT+CGG 0.504232 1_4:+60580964 Msa0174800:five_prime_UTR
GCAATAAAGAAAAGACAGGT+TGG 0.507374 1_4:-60584901 None:intergenic
TTCAAATGTTGAGTTACCCT+TGG 0.507777 1_4:-60582737 None:intergenic
GGAAATACTTGGAGAGAATG+AGG 0.507889 1_4:+60583569 Msa0174800:CDS
GTTCTTAGATCAAATGATCC+AGG 0.508146 1_4:+60585225 Msa0174800:three_prime_UTR
GATCCATCACTTGTTTCAGT+TGG 0.512640 1_4:+60584558 Msa0174800:CDS
AAACAAATACAGAGAAGGAC+AGG 0.514854 1_4:+60582981 Msa0174800:CDS
ATGGGCTTTAGGACAAGTGC+TGG 0.516592 1_4:+60583702 Msa0174800:CDS
TGGTATCTCAATCTATACAT+TGG 0.527281 1_4:+60582946 Msa0174800:CDS
GACACGGCTGCAAAGGCACT+TGG 0.530267 1_4:+60583310 Msa0174800:CDS
TTTGTCGGTTAGCTGGTTCG+TGG 0.531949 1_4:+60584666 Msa0174800:three_prime_UTR
CAGTGCAGACACGGCTGCAA+AGG 0.536598 1_4:+60583303 Msa0174800:CDS
TGAGCTCAATAGCACCAACT+AGG 0.536868 1_4:-60584530 None:intergenic
TACATCTCCATTTCCTCCAC+GGG 0.537555 1_4:-60581644 None:intergenic
GAAGGAGCTGCTGATGAAGA+TGG 0.538137 1_4:+60581303 Msa0174800:CDS
TCTATGTTTGAGGAATATAC+AGG 0.540497 1_4:+60581027 Msa0174800:five_prime_UTR
CAGAAATGGATCAAATATGA+GGG 0.542184 1_4:+60584347 Msa0174800:intron
GAGCTCAATAGCACCAACTA+GGG 0.543925 1_4:-60584529 None:intergenic
GATTGTATAGAAGAACGTAC+AGG 0.547614 1_4:+60582809 Msa0174800:CDS
TGATCTCCCACAGGCACTTG+AGG 0.549755 1_4:+60582199 Msa0174800:CDS
GAGGAGAACATCGCCTAGGT+GGG 0.550679 1_4:-60582693 None:intergenic
AGGATGTGTTAAAATTTGCA+AGG 0.553250 1_4:+60584975 Msa0174800:three_prime_UTR
ATGGATATAAATCGATCTAT+GGG 0.553604 1_4:+60584412 Msa0174800:CDS
ATGATGATTGCATACACAGA+TGG 0.554940 1_4:-60584753 None:intergenic
GATGCATTTGAGTTGTTGGA+TGG 0.557277 1_4:+60584393 Msa0174800:CDS
TCGGGGATAGAGTCAAGTAT+TGG 0.557281 1_4:+60582614 Msa0174800:CDS
GGTACAAGATCCTCCCTAGT+TGG 0.557600 1_4:+60584516 Msa0174800:CDS
TTCGGATTCACGACTTGAGA+AGG 0.558340 1_4:-60583182 None:intergenic
AAGAACTTCACATTCTCGTA+TGG 0.560062 1_4:-60584831 None:intergenic
ATATGATGAACTACCAAGTA+CGG 0.560828 1_4:-60582760 None:intergenic
ATGCGTTGCTTAGTGTCCGT+TGG 0.568364 1_4:-60584088 None:intergenic
GCTGTAGGTAGTTATGATCA+AGG 0.568860 1_4:+60582664 Msa0174800:CDS
AGGATAGTCTCCGTGCAACA+AGG 0.573785 1_4:-60583122 None:intergenic
CTAAAGCCCATGGTGTGAAT+GGG 0.574280 1_4:-60583690 None:intergenic
AAAAGACAACACCGAATTGG+TGG 0.575887 1_4:-60580975 None:intergenic
CTCAGTACCCATTCACACCA+TGG 0.576987 1_4:+60583683 Msa0174800:intron
GATTCACGACTTGAGAAGGC+AGG 0.580009 1_4:-60583178 None:intergenic
TATTCATCCTCAAGTGCCTG+TGG 0.584747 1_4:-60582206 None:intergenic
GCACTTGAGGATGAATATGA+AGG 0.584798 1_4:+60582212 Msa0174800:CDS
AAATACTTGCATGGATACAT+TGG 0.589515 1_4:+60584134 Msa0174800:CDS
TGTTTGAATTGTTAGGCCAA+CGG 0.590244 1_4:+60584072 Msa0174800:intron
CTACATCTCCATTTCCTCCA+CGG 0.591371 1_4:-60581645 None:intergenic
TGCATTATAGAGAGCACCAA+GGG 0.592510 1_4:+60582721 Msa0174800:CDS
TGATTCCATGAAGGCTAATG+CGG 0.594400 1_4:+60583144 Msa0174800:CDS
ACAAGACTCAAACATGTATG+TGG 0.594850 1_4:-60581085 None:intergenic
CGACACGTACCACAAATACA+AGG 0.595864 1_4:+60581672 Msa0174800:CDS
ATTATGGAACCCTTGTTGCA+CGG 0.595957 1_4:+60583112 Msa0174800:CDS
GATTCCATGAAGGCTAATGC+GGG 0.597335 1_4:+60583145 Msa0174800:CDS
TCCTCAAACAAATACAGAGA+AGG 0.600950 1_4:+60582976 Msa0174800:CDS
ATCACTTCATGATGAATCAA+GGG 0.602506 1_4:+60584109 Msa0174800:CDS
GGAGGAGAACATCGCCTAGG+TGG 0.604005 1_4:-60582694 None:intergenic
AGCACTTGTCCTAAAGCCCA+TGG 0.604713 1_4:-60583700 None:intergenic
GCAAAGGTATCCCAAATGCT+AGG 0.604783 1_4:-60581333 None:intergenic
TCAGTACCCATTCACACCAT+GGG 0.607004 1_4:+60583684 Msa0174800:intron
TCAAGGGTGAAATACTTGCA+TGG 0.610483 1_4:+60584125 Msa0174800:CDS
TGTCCAACTGAAACAAGTGA+TGG 0.610873 1_4:-60584561 None:intergenic
ATGGGCTGTACTATGTCGAT+AGG 0.611327 1_4:+60584430 Msa0174800:CDS
GAGCCCAATATCTTCGCTGT+AGG 0.611798 1_4:+60582649 Msa0174800:CDS
AGACTATCCTGATTCCATGA+AGG 0.617004 1_4:+60583135 Msa0174800:CDS
GTATCTCAATCTATACATTG+GGG 0.624763 1_4:+60582948 Msa0174800:CDS
CTCAATAGCACCAACTAGGG+AGG 0.624860 1_4:-60584526 None:intergenic
TAGAGGACCCGTCAACCCGA+AGG 0.628663 1_4:+60581973 Msa0174800:CDS
ATTCATCCTCAAGTGCCTGT+GGG 0.630670 1_4:-60582205 None:intergenic
TTGAGGATGAATATGAAGGA+TGG 0.630697 1_4:+60582216 Msa0174800:CDS
TGACTAACCAGCATGTGCAA+AGG 0.633306 1_4:-60581349 None:intergenic
TGAAGGATGGCTTAGTCGTG+AGG 0.633525 1_4:+60582229 Msa0174800:CDS
GAGTGATCTTACATTAACAA+TGG 0.634429 1_4:+60584781 Msa0174800:three_prime_UTR
AGAGGACCCGTCAACCCGAA+GGG 0.637162 1_4:+60581974 Msa0174800:CDS
ATTGTATAGAAGAACGTACA+GGG 0.641550 1_4:+60582810 Msa0174800:CDS
GAAGTTCTTTGAGAAATCTG+AGG 0.642090 1_4:+60584845 Msa0174800:three_prime_UTR
AAAGAGAACCTGATATGCAG+AGG 0.645981 1_4:-60581203 None:intergenic
CTCTCTATAATGCAAAATGG+AGG 0.649451 1_4:-60582712 None:intergenic
GAGAGATTTCAGTGCAGACA+CGG 0.652250 1_4:+60583294 Msa0174800:CDS
ATCAAGGAATCTCCCCACCT+AGG 0.654783 1_4:+60582680 Msa0174800:CDS
AATGGAGGAGAACATCGCCT+AGG 0.656199 1_4:-60582697 None:intergenic
GGATAGTCTCCGTGCAACAA+GGG 0.671633 1_4:-60583121 None:intergenic
ACACAACTATGATCTCCCAC+AGG 0.672059 1_4:+60582190 Msa0174800:CDS
GATTATGATGAATAGGTGGA+AGG 0.677975 1_4:+60581285 Msa0174800:intron
AGAAATGGATCAAATATGAG+GGG 0.678928 1_4:+60584348 Msa0174800:intron
ATACCTTAAGGAATCAAGCA+TGG 0.679375 1_4:-60584159 None:intergenic
AGGAGAACATCGCCTAGGTG+GGG 0.681198 1_4:-60582692 None:intergenic
AACAAATACAGAGAAGGACA+GGG 0.687248 1_4:+60582982 Msa0174800:CDS
ATATGAGGGGATATTTCGTG+TGG 0.687480 1_4:+60584361 Msa0174800:CDS
TAGTTGTGTAGTGTGACATG+TGG 0.709426 1_4:-60582176 None:intergenic
TTGCATTATAGAGAGCACCA+AGG 0.710901 1_4:+60582720 Msa0174800:CDS
TATCTCAATCTATACATTGG+GGG 0.717741 1_4:+60582949 Msa0174800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTGATGA+TGG + chr1_4:60581060-60581079 Msa0174800:exon 10.0%
!!! ATAATTGATAATAAACTTTT+GGG - chr1_4:60581465-60581484 None:intergenic 10.0%
!!! AATAATTGATAATAAACTTT+TGG - chr1_4:60581466-60581485 None:intergenic 10.0%
!!! TTTTTCAAAAGATAATAAAA+TGG - chr1_4:60584197-60584216 None:intergenic 10.0%
!!! AATCATTTTTCTGAATTATT+TGG + chr1_4:60581427-60581446 Msa0174800:intron 15.0%
!!! GAAATAAAAGAATTTTCAAA+GGG - chr1_4:60581942-60581961 None:intergenic 15.0%
!!! AGAAATAAAAGAATTTTCAA+AGG - chr1_4:60581943-60581962 None:intergenic 15.0%
!!! TGTTTTTGAAATCTTAATTA+AGG - chr1_4:60582089-60582108 None:intergenic 15.0%
!! AAAAACTTATAATAGAAAAG+TGG + chr1_4:60584924-60584943 Msa0174800:three_prime_UTR 15.0%
!! TAAAATACAATGAAATTGCA+TGG - chr1_4:60581252-60581271 None:intergenic 20.0%
!!! ACTAGCATTTTTATACAAAA+AGG + chr1_4:60581616-60581635 Msa0174800:intron 20.0%
!!! CTAGCATTTTTATACAAAAA+GGG + chr1_4:60581617-60581636 Msa0174800:intron 20.0%
!! TGTCAAAAAAATGCAATATA+AGG - chr1_4:60582520-60582539 None:intergenic 20.0%
!! CAGTATGAAGAAAAAAAATT+AGG - chr1_4:60582843-60582862 None:intergenic 20.0%
!!! ATTATAACCAATTTTAGAGT+CGG - chr1_4:60583053-60583072 None:intergenic 20.0%
!! AACCTAGTCAAAATATTATT+TGG - chr1_4:60583901-60583920 None:intergenic 20.0%
!! GATAAAAAAAAAACATGAGA+AGG - chr1_4:60584324-60584343 None:intergenic 20.0%
!!! TTTTTTTTATCCTTCAGAAA+TGG + chr1_4:60584333-60584352 Msa0174800:intron 20.0%
!!! CATTAAAGTGTTATTACATA+TGG + chr1_4:60584618-60584637 Msa0174800:three_prime_UTR 20.0%
!!! AAATTCTTATGTTGTTTCAA+AGG + chr1_4:60585076-60585095 Msa0174800:three_prime_UTR 20.0%
!! TTTCTTTTTGCTTCTAAACT+TGG + chr1_4:60581108-60581127 Msa0174800:CDS 25.0%
! TACTTGTGATTATGATGAAT+AGG + chr1_4:60581278-60581297 Msa0174800:intron 25.0%
!! CATTTTTCTGAATTATTTGG+AGG + chr1_4:60581430-60581449 Msa0174800:intron 25.0%
!! TCTATCTTTCTAATTTTGTC+TGG + chr1_4:60581713-60581732 Msa0174800:intron 25.0%
!! TATGATTCATCTTTTAATGC+AGG + chr1_4:60581748-60581767 Msa0174800:intron 25.0%
!! TTTAAGTTCAGTAGAATACT+TGG - chr1_4:60581845-60581864 None:intergenic 25.0%
! ATCAATGAACTCATTAGAAA+TGG + chr1_4:60582019-60582038 Msa0174800:CDS 25.0%
! AATTCTTAGTGCATGAAATA+AGG + chr1_4:60582304-60582323 Msa0174800:intron 25.0%
!!! AAAAAGTACTTTTTGTGCTT+AGG + chr1_4:60582485-60582504 Msa0174800:intron 25.0%
!!! TGTACTTTTCTGTGTTTTTT+TGG + chr1_4:60582863-60582882 Msa0174800:intron 25.0%
!!! GTACTTTTCTGTGTTTTTTT+GGG + chr1_4:60582864-60582883 Msa0174800:intron 25.0%
!! ACGAATTAGCGATTTTTATT+TGG + chr1_4:60583015-60583034 Msa0174800:CDS 25.0%
!!! CGAATTAGCGATTTTTATTT+GGG + chr1_4:60583016-60583035 Msa0174800:CDS 25.0%
! AATTATGCCAATAAAGTCAT+AGG - chr1_4:60583221-60583240 None:intergenic 25.0%
!! TGTATCACTTGTTGAATAAT+TGG + chr1_4:60583496-60583515 Msa0174800:intron 25.0%
!!! AATCATTTCTTTGTTTTCTG+TGG + chr1_4:60583531-60583550 Msa0174800:intron 25.0%
!! TTTTCATGAATGAATATAGG+TGG - chr1_4:60583754-60583773 None:intergenic 25.0%
!! CCATTTTCATGAATGAATAT+AGG - chr1_4:60583757-60583776 None:intergenic 25.0%
! CCTATATTCATTCATGAAAA+TGG + chr1_4:60583754-60583773 Msa0174800:CDS 25.0%
!!! AGCCAAATAATATTTTGACT+AGG + chr1_4:60583896-60583915 Msa0174800:intron 25.0%
! ATTATCTATCCTCAATTGTA+TGG + chr1_4:60583944-60583963 Msa0174800:intron 25.0%
! TTTACAATTCCATACAATTG+AGG - chr1_4:60583956-60583975 None:intergenic 25.0%
! TTCCAATTGTTTGAATTGTT+AGG + chr1_4:60584065-60584084 Msa0174800:intron 25.0%
!!! TATACAAGTTTTGTGTGTTT+AGG - chr1_4:60584250-60584269 None:intergenic 25.0%
! ATGGATATAAATCGATCTAT+GGG + chr1_4:60584412-60584431 Msa0174800:CDS 25.0%
!! TAACTCTAATGGTTTTTCTT+TGG + chr1_4:60584878-60584897 Msa0174800:three_prime_UTR 25.0%
!! TTTTGCAATAAAGAAAAGAC+AGG - chr1_4:60584908-60584927 None:intergenic 25.0%
!!! AGAATTTGTTAAGATGTCTT+AGG - chr1_4:60585063-60585082 None:intergenic 25.0%
ACTCACACTCTTCTTAAAAA+TGG + chr1_4:60580998-60581017 Msa0174800:five_prime_UTR 30.0%
TCTATGTTTGAGGAATATAC+AGG + chr1_4:60581027-60581046 Msa0174800:five_prime_UTR 30.0%
TTGTGATTATGATGAATAGG+TGG + chr1_4:60581281-60581300 Msa0174800:intron 30.0%
TCAACTCTCAAATGATAAGA+TGG - chr1_4:60581389-60581408 None:intergenic 30.0%
! TTTTCGCTTCAGAAAAAAGT+TGG - chr1_4:60581500-60581519 None:intergenic 30.0%
AAAATGCTAGTCATGAGAAT+TGG - chr1_4:60581607-60581626 None:intergenic 30.0%
! TCTTGTTTACCTTGTATTTG+TGG - chr1_4:60581684-60581703 None:intergenic 30.0%
TACAAGGTAAACAAGATACA+AGG + chr1_4:60581688-60581707 Msa0174800:intron 30.0%
CCAAGAAATGGAAAATCTAT+AGG - chr1_4:60581810-60581829 None:intergenic 30.0%
! CCTATAGATTTTCCATTTCT+TGG + chr1_4:60581807-60581826 Msa0174800:CDS 30.0%
TATCAATCTTGACCAAGAAA+TGG - chr1_4:60581822-60581841 None:intergenic 30.0%
!! TTCTTTTATTTCTTCCCAGA+TGG + chr1_4:60581950-60581969 Msa0174800:intron 30.0%
! TACAAGTCTTTTCCATTTGT+AGG + chr1_4:60582146-60582165 Msa0174800:intron 30.0%
TTTAAGAACTAACAGCAAAC+TGG - chr1_4:60582285-60582304 None:intergenic 30.0%
TTTCTCTCTCTCTAGATTTA+TGG - chr1_4:60582339-60582358 None:intergenic 30.0%
ATAAATCTAGAGAGAGAGAA+AGG + chr1_4:60582338-60582357 Msa0174800:intron 30.0%
TATTTCACGCATCAATTACT+TGG - chr1_4:60582374-60582393 None:intergenic 30.0%
ATATGATGAACTACCAAGTA+CGG - chr1_4:60582763-60582782 None:intergenic 30.0%
ATTGTATAGAAGAACGTACA+GGG + chr1_4:60582810-60582829 Msa0174800:CDS 30.0%
TGGTATCTCAATCTATACAT+TGG + chr1_4:60582946-60582965 Msa0174800:CDS 30.0%
GGTATCTCAATCTATACATT+GGG + chr1_4:60582947-60582966 Msa0174800:CDS 30.0%
GTATCTCAATCTATACATTG+GGG + chr1_4:60582948-60582967 Msa0174800:CDS 30.0%
TATCTCAATCTATACATTGG+GGG + chr1_4:60582949-60582968 Msa0174800:CDS 30.0%
CCATAATCCTGCAATAAAAT+AGG - chr1_4:60583099-60583118 None:intergenic 30.0%
! CCTATTTTATTGCAGGATTA+TGG + chr1_4:60583096-60583115 Msa0174800:intron 30.0%
!! CTAAGCTTTAAAATCCACTA+TGG - chr1_4:60583356-60583375 None:intergenic 30.0%
! ATCACTTGTTGAATAATTGG+TGG + chr1_4:60583499-60583518 Msa0174800:intron 30.0%
TACTTCACAGTAAAACTATC+TGG + chr1_4:60583650-60583669 Msa0174800:intron 30.0%
! TAAAACTATCTGGTTTGACT+TGG + chr1_4:60583660-60583679 Msa0174800:intron 30.0%
TGATTGCAATGAATCTCTTT+AGG + chr1_4:60583805-60583824 Msa0174800:intron 30.0%
GACTAGGTTATTGCATATTA+TGG + chr1_4:60583912-60583931 Msa0174800:intron 30.0%
ATAACTACAAGCGTTATGAA+TGG - chr1_4:60584015-60584034 None:intergenic 30.0%
ATCACTTCATGATGAATCAA+GGG + chr1_4:60584109-60584128 Msa0174800:CDS 30.0%
AAATACTTGCATGGATACAT+TGG + chr1_4:60584134-60584153 Msa0174800:CDS 30.0%
! TTTAGGACTGTATTCAAACA+TGG - chr1_4:60584233-60584252 None:intergenic 30.0%
CACATACAATATCAAAGCAT+AGG - chr1_4:60584296-60584315 None:intergenic 30.0%
CATATTTGATCCATTTCTGA+AGG - chr1_4:60584346-60584365 None:intergenic 30.0%
TCAGAAATGGATCAAATATG+AGG + chr1_4:60584346-60584365 Msa0174800:intron 30.0%
CAGAAATGGATCAAATATGA+GGG + chr1_4:60584347-60584366 Msa0174800:intron 30.0%
AGAAATGGATCAAATATGAG+GGG + chr1_4:60584348-60584367 Msa0174800:intron 30.0%
GATGGATATAAATCGATCTA+TGG + chr1_4:60584411-60584430 Msa0174800:CDS 30.0%
ATCTTGTACCCTTCAAAAAT+TGG - chr1_4:60584506-60584525 None:intergenic 30.0%
GAGTGATCTTACATTAACAA+TGG + chr1_4:60584781-60584800 Msa0174800:three_prime_UTR 30.0%
AGGATGTGTTAAAATTTGCA+AGG + chr1_4:60584975-60584994 Msa0174800:three_prime_UTR 30.0%
!! ATTTTAGAAGATAGCTGCAA+AGG + chr1_4:60585034-60585053 Msa0174800:three_prime_UTR 30.0%
!! TCTTATGTTGTTTCAAAGGT+TGG + chr1_4:60585080-60585099 Msa0174800:three_prime_UTR 30.0%
!! CTTATGTTGTTTCAAAGGTT+GGG + chr1_4:60585081-60585100 Msa0174800:three_prime_UTR 30.0%
GAAAGTGATACTATAGTTCA+TGG + chr1_4:60585103-60585122 Msa0174800:three_prime_UTR 30.0%
ATAAGTCAGAACCACCAATT+CGG + chr1_4:60580964-60580983 Msa0174800:five_prime_UTR 35.0%
AGTAAAAGACAACACCGAAT+TGG - chr1_4:60580981-60581000 None:intergenic 35.0%
ATGGAACACATCTATGTTTG+AGG + chr1_4:60581017-60581036 Msa0174800:five_prime_UTR 35.0%
ACAAGACTCAAACATGTATG+TGG - chr1_4:60581088-60581107 None:intergenic 35.0%
!!! TTCCCTGTTGACTTTGTTTT+TGG + chr1_4:60581172-60581191 Msa0174800:CDS 35.0%
!!! TCCCTGTTGACTTTGTTTTT+GGG + chr1_4:60581173-60581192 Msa0174800:CDS 35.0%
ACCCAAAAACAAAGTCAACA+GGG - chr1_4:60581177-60581196 None:intergenic 35.0%
TTGCATGGTTACTTCTCTTT+GGG - chr1_4:60581237-60581256 None:intergenic 35.0%
ATTGCATGGTTACTTCTCTT+TGG - chr1_4:60581238-60581257 None:intergenic 35.0%
GATTATGATGAATAGGTGGA+AGG + chr1_4:60581285-60581304 Msa0174800:intron 35.0%
TCATTTGAGAGTTGAGACTA+TGG + chr1_4:60581394-60581413 Msa0174800:intron 35.0%
AGCGAAAAACAATGAGAAAC+TGG + chr1_4:60581512-60581531 Msa0174800:intron 35.0%
GCGAAAAACAATGAGAAACT+GGG + chr1_4:60581513-60581532 Msa0174800:intron 35.0%
TGGAAAATCTATAGGCTTCA+AGG - chr1_4:60581802-60581821 None:intergenic 35.0%
TTGAGGATGAATATGAAGGA+TGG + chr1_4:60582216-60582235 Msa0174800:CDS 35.0%
!! CATCAATTACTTGGTGTCTA+TGG - chr1_4:60582365-60582384 None:intergenic 35.0%
ATTGATCATATGAGCATGTG+AGG - chr1_4:60582424-60582443 None:intergenic 35.0%
TCACATGCTCATATGATCAA+TGG + chr1_4:60582423-60582442 Msa0174800:intron 35.0%
!!! GATGTGTGTTTTAGAGAGTT+CGG + chr1_4:60582595-60582614 Msa0174800:CDS 35.0%
!!! ATGTGTGTTTTAGAGAGTTC+GGG + chr1_4:60582596-60582615 Msa0174800:CDS 35.0%
CTCTCTATAATGCAAAATGG+AGG - chr1_4:60582715-60582734 None:intergenic 35.0%
GTGCTCTCTATAATGCAAAA+TGG - chr1_4:60582718-60582737 None:intergenic 35.0%
TTCAAATGTTGAGTTACCCT+TGG - chr1_4:60582740-60582759 None:intergenic 35.0%
GATTGTATAGAAGAACGTAC+AGG + chr1_4:60582809-60582828 Msa0174800:CDS 35.0%
! GAGGAACAAAATGGATTTGT+TGG + chr1_4:60582926-60582945 Msa0174800:CDS 35.0%
TCCTCAAACAAATACAGAGA+AGG + chr1_4:60582976-60582995 Msa0174800:CDS 35.0%
TCCTTCTCTGTATTTGTTTG+AGG - chr1_4:60582980-60582999 None:intergenic 35.0%
AAACAAATACAGAGAAGGAC+AGG + chr1_4:60582981-60583000 Msa0174800:CDS 35.0%
AACAAATACAGAGAAGGACA+GGG + chr1_4:60582982-60583001 Msa0174800:CDS 35.0%
!! TTAGCGATTTTTATTTGGGC+TGG + chr1_4:60583020-60583039 Msa0174800:CDS 35.0%
!! TGAGTTACCGACTCTAAAAT+TGG + chr1_4:60583043-60583062 Msa0174800:intron 35.0%
! CTTACTGCCTATTTTATTGC+AGG + chr1_4:60583089-60583108 Msa0174800:intron 35.0%
!! ATAGGAACCCTTAACTTGTT+CGG - chr1_4:60583203-60583222 None:intergenic 35.0%
AAGGGTTCCTATGACTTTAT+TGG + chr1_4:60583211-60583230 Msa0174800:CDS 35.0%
TGTGTTGTGTTTAACCATAG+TGG + chr1_4:60583339-60583358 Msa0174800:intron 35.0%
! TATCTGATTCCCCTTTTCAT+CGG + chr1_4:60583459-60583478 Msa0174800:intron 35.0%
TTGTTTACACCGATGAAAAG+GGG - chr1_4:60583471-60583490 None:intergenic 35.0%
GTTGTTTACACCGATGAAAA+GGG - chr1_4:60583472-60583491 None:intergenic 35.0%
AGTTGTTTACACCGATGAAA+AGG - chr1_4:60583473-60583492 None:intergenic 35.0%
!! TTTGTTTTCTGTGGTTTTGC+AGG + chr1_4:60583540-60583559 Msa0174800:intron 35.0%
GAAACATTCAAGACCCTTTA+TGG + chr1_4:60583724-60583743 Msa0174800:CDS 35.0%
!! TATAGGTGGATTGCCATAAA+GGG - chr1_4:60583740-60583759 None:intergenic 35.0%
!! ATATAGGTGGATTGCCATAA+AGG - chr1_4:60583741-60583760 None:intergenic 35.0%
TCAACGTAATCTTGAACTAG+AGG - chr1_4:60583788-60583807 None:intergenic 35.0%
! TCTCTTTAGGAAATCGTCAT+TGG + chr1_4:60583818-60583837 Msa0174800:intron 35.0%
TGAGGTTGAATAATGAGTTG+CGG + chr1_4:60583849-60583868 Msa0174800:intron 35.0%
TGTCTATGACAGAAAAACCT+TGG - chr1_4:60583877-60583896 None:intergenic 35.0%
CAAGAGATTTGACAATGATC+TGG + chr1_4:60583985-60584004 Msa0174800:intron 35.0%
GGCCTAACAATTCAAACAAT+TGG - chr1_4:60584070-60584089 None:intergenic 35.0%
TGTTTGAATTGTTAGGCCAA+CGG + chr1_4:60584072-60584091 Msa0174800:intron 35.0%
CATCACTTCATGATGAATCA+AGG + chr1_4:60584108-60584127 Msa0174800:CDS 35.0%
ATACCTTAAGGAATCAAGCA+TGG - chr1_4:60584162-60584181 None:intergenic 35.0%
AGTAGCAATCACATACCTTA+AGG - chr1_4:60584174-60584193 None:intergenic 35.0%
!! CATTGATGCATTTGAGTTGT+TGG + chr1_4:60584389-60584408 Msa0174800:CDS 35.0%
! AAATTGGCTGTACCATTTTG+CGG - chr1_4:60584490-60584509 None:intergenic 35.0%
! ATGGTACAGCCAATTTTTGA+AGG + chr1_4:60584494-60584513 Msa0174800:CDS 35.0%
! TGGTACAGCCAATTTTTGAA+GGG + chr1_4:60584495-60584514 Msa0174800:CDS 35.0%
TGGACATTTACTTCAGTAGT+AGG + chr1_4:60584578-60584597 Msa0174800:exon 35.0%
!! GAGAGTCTTTTCAGTTTTGT+CGG + chr1_4:60584651-60584670 Msa0174800:three_prime_UTR 35.0%
ATGATGATTGCATACACAGA+TGG - chr1_4:60584756-60584775 None:intergenic 35.0%
TGGTATCTACTTCTTCGATT+TGG + chr1_4:60584801-60584820 Msa0174800:three_prime_UTR 35.0%
GGTATCTACTTCTTCGATTT+GGG + chr1_4:60584802-60584821 Msa0174800:three_prime_UTR 35.0%
AAGAACTTCACATTCTCGTA+TGG - chr1_4:60584834-60584853 None:intergenic 35.0%
! GAAGTTCTTTGAGAAATCTG+AGG + chr1_4:60584845-60584864 Msa0174800:three_prime_UTR 35.0%
GTAGTCATGACTAACTCTAA+TGG + chr1_4:60584867-60584886 Msa0174800:three_prime_UTR 35.0%
GCAATAAAGAAAAGACAGGT+TGG - chr1_4:60584904-60584923 None:intergenic 35.0%
! TCAAGTGAAGTACTCAACTA+TGG - chr1_4:60585168-60585187 None:intergenic 35.0%
AAAAGACAACACCGAATTGG+TGG - chr1_4:60580978-60580997 None:intergenic 40.0%
TTGCTTCTAAACTTGGCTGT+TGG + chr1_4:60581115-60581134 Msa0174800:CDS 40.0%
TGCTTCTAAACTTGGCTGTT+GGG + chr1_4:60581116-60581135 Msa0174800:CDS 40.0%
GACCCAAAAACAAAGTCAAC+AGG - chr1_4:60581178-60581197 None:intergenic 40.0%
!!! GTTGACTTTGTTTTTGGGTC+AGG + chr1_4:60581178-60581197 Msa0174800:CDS 40.0%
AAAGAGAACCTGATATGCAG+AGG - chr1_4:60581206-60581225 None:intergenic 40.0%
TGCATGGTTACTTCTCTTTG+GGG - chr1_4:60581236-60581255 None:intergenic 40.0%
ATGGAAGAACTCCTAGCATT+TGG + chr1_4:60581322-60581341 Msa0174800:CDS 40.0%
TGGAAGAACTCCTAGCATTT+GGG + chr1_4:60581323-60581342 Msa0174800:CDS 40.0%
TATTTCTTCCCAGATGGTAG+AGG + chr1_4:60581956-60581975 Msa0174800:intron 40.0%
TTGTAGTACTGCAATCCCTT+CGG - chr1_4:60581992-60582011 None:intergenic 40.0%
TGTGGTTGGATTCCTACAAA+TGG - chr1_4:60582161-60582180 None:intergenic 40.0%
TAGTTGTGTAGTGTGACATG+TGG - chr1_4:60582179-60582198 None:intergenic 40.0%
GCACTTGAGGATGAATATGA+AGG + chr1_4:60582212-60582231 Msa0174800:CDS 40.0%
!!! TGTGTGTTTTAGAGAGTTCG+GGG + chr1_4:60582597-60582616 Msa0174800:CDS 40.0%
CTACCTACAGCGAAGATATT+GGG - chr1_4:60582655-60582674 None:intergenic 40.0%
ACTACCTACAGCGAAGATAT+TGG - chr1_4:60582656-60582675 None:intergenic 40.0%
GCTGTAGGTAGTTATGATCA+AGG + chr1_4:60582664-60582683 Msa0174800:CDS 40.0%
!! TTGCATTATAGAGAGCACCA+AGG + chr1_4:60582720-60582739 Msa0174800:CDS 40.0%
!! TGCATTATAGAGAGCACCAA+GGG + chr1_4:60582721-60582740 Msa0174800:CDS 40.0%
CTCAACATTTGAACCGTACT+TGG + chr1_4:60582747-60582766 Msa0174800:CDS 40.0%
!! CTAGAGACTTGTTACATTGC+AGG + chr1_4:60582904-60582923 Msa0174800:intron 40.0%
ACATTGCAGGAGGAACAAAA+TGG + chr1_4:60582917-60582936 Msa0174800:intron 40.0%
ATTATGGAACCCTTGTTGCA+CGG + chr1_4:60583112-60583131 Msa0174800:CDS 40.0%
AGACTATCCTGATTCCATGA+AGG + chr1_4:60583135-60583154 Msa0174800:CDS 40.0%
TGATTCCATGAAGGCTAATG+CGG + chr1_4:60583144-60583163 Msa0174800:CDS 40.0%
TCGTGAATCCGAACAAGTTA+AGG + chr1_4:60583192-60583211 Msa0174800:CDS 40.0%
CGTGAATCCGAACAAGTTAA+GGG + chr1_4:60583193-60583212 Msa0174800:CDS 40.0%
GGAAATACTTGGAGAGAATG+AGG + chr1_4:60583569-60583588 Msa0174800:CDS 40.0%
GAGATTTGACAATGATCTGG+TGG + chr1_4:60583988-60584007 Msa0174800:intron 40.0%
TCAAGGGTGAAATACTTGCA+TGG + chr1_4:60584125-60584144 Msa0174800:CDS 40.0%
ATATGAGGGGATATTTCGTG+TGG + chr1_4:60584361-60584380 Msa0174800:CDS 40.0%
!! GATGCATTTGAGTTGTTGGA+TGG + chr1_4:60584393-60584412 Msa0174800:CDS 40.0%
TTTGGGTATCTTCTCAACTC+TGG - chr1_4:60584462-60584481 None:intergenic 40.0%
! ACCATTTTGCGGATAGCTTT+GGG - chr1_4:60584479-60584498 None:intergenic 40.0%
! TACCATTTTGCGGATAGCTT+TGG - chr1_4:60584480-60584499 None:intergenic 40.0%
!! TGGTGCTATTGAGCTCAATA+AGG + chr1_4:60584536-60584555 Msa0174800:CDS 40.0%
GATCCATCACTTGTTTCAGT+TGG + chr1_4:60584558-60584577 Msa0174800:CDS 40.0%
TGTCCAACTGAAACAAGTGA+TGG - chr1_4:60584564-60584583 None:intergenic 40.0%
!! TTTCAGTTTTGTCGGTTAGC+TGG + chr1_4:60584659-60584678 Msa0174800:three_prime_UTR 40.0%
TGCATACACAGATGGAATAG+TGG - chr1_4:60584748-60584767 None:intergenic 40.0%
TTCCAGATGCAAGTCATCTT+TGG + chr1_4:60584947-60584966 Msa0174800:three_prime_UTR 40.0%
! AACCAAAGATGACTTGCATC+TGG - chr1_4:60584952-60584971 None:intergenic 40.0%
! GCAAGTCATCTTTGGTTTCT+AGG + chr1_4:60584955-60584974 Msa0174800:three_prime_UTR 40.0%
GCTTCTAAACTTGGCTGTTG+GGG + chr1_4:60581117-60581136 Msa0174800:CDS 45.0%
!! GCAAAGGTATCCCAAATGCT+AGG - chr1_4:60581336-60581355 None:intergenic 45.0%
TGACTAACCAGCATGTGCAA+AGG - chr1_4:60581352-60581371 None:intergenic 45.0%
ATACAAAAAGGGTTTGCCCG+TGG + chr1_4:60581628-60581647 Msa0174800:intron 45.0%
TACATCTCCATTTCCTCCAC+GGG - chr1_4:60581647-60581666 None:intergenic 45.0%
CTACATCTCCATTTCCTCCA+CGG - chr1_4:60581648-60581667 None:intergenic 45.0%
CGACACGTACCACAAATACA+AGG + chr1_4:60581672-60581691 Msa0174800:CDS 45.0%
TGTAGTACTGCAATCCCTTC+GGG - chr1_4:60581991-60582010 None:intergenic 45.0%
TGTGTAGTGTGACATGTGGT+TGG - chr1_4:60582175-60582194 None:intergenic 45.0%
ACACAACTATGATCTCCCAC+AGG + chr1_4:60582190-60582209 Msa0174800:CDS 45.0%
ATTCATCCTCAAGTGCCTGT+GGG - chr1_4:60582208-60582227 None:intergenic 45.0%
TATTCATCCTCAAGTGCCTG+TGG - chr1_4:60582209-60582228 None:intergenic 45.0%
TCGGGGATAGAGTCAAGTAT+TGG + chr1_4:60582614-60582633 Msa0174800:CDS 45.0%
!! GAGACTTGTTACATTGCAGG+AGG + chr1_4:60582907-60582926 Msa0174800:intron 45.0%
!! GCATTAGCCTTCATGGAATC+AGG - chr1_4:60583145-60583164 None:intergenic 45.0%
GATTCCATGAAGGCTAATGC+GGG + chr1_4:60583145-60583164 Msa0174800:CDS 45.0%
TTCGGATTCACGACTTGAGA+AGG - chr1_4:60583185-60583204 None:intergenic 45.0%
GAGAGATTTCAGTGCAGACA+CGG + chr1_4:60583294-60583313 Msa0174800:CDS 45.0%
GCAGGTGTAGAGGAAATACT+TGG + chr1_4:60583558-60583577 Msa0174800:intron 45.0%
TCAGTACCCATTCACACCAT+GGG + chr1_4:60583684-60583703 Msa0174800:intron 45.0%
CTAAAGCCCATGGTGTGAAT+GGG - chr1_4:60583693-60583712 None:intergenic 45.0%
! TCGTCATTGGATGCTGATTG+AGG + chr1_4:60583831-60583850 Msa0174800:intron 45.0%
GTGCCATGCTTGATTCCTTA+AGG + chr1_4:60584156-60584175 Msa0174800:CDS 45.0%
! ATGGGCTGTACTATGTCGAT+AGG + chr1_4:60584430-60584449 Msa0174800:CDS 45.0%
ACCCAAAGCTATCCGCAAAA+TGG + chr1_4:60584475-60584494 Msa0174800:CDS 45.0%
GAGCTCAATAGCACCAACTA+GGG - chr1_4:60584532-60584551 None:intergenic 45.0%
TGAGCTCAATAGCACCAACT+AGG - chr1_4:60584533-60584552 None:intergenic 45.0%
TCGCATAGTTCACGCATAGA+TGG - chr1_4:60585014-60585033 None:intergenic 45.0%
GAAGGAGCTGCTGATGAAGA+TGG + chr1_4:60581303-60581322 Msa0174800:CDS 50.0%
TGGGATACCTTTGCACATGC+TGG + chr1_4:60581342-60581361 Msa0174800:CDS 50.0%
GTATTTGTGGTACGTGTCGC+AGG - chr1_4:60581671-60581690 None:intergenic 50.0%
GTGCAGCTCATGCTTGAAAC+AGG + chr1_4:60581776-60581795 Msa0174800:CDS 50.0%
TGAAGGATGGCTTAGTCGTG+AGG + chr1_4:60582229-60582248 Msa0174800:CDS 50.0%
CAGCAAACTGGTGCAGCTAT+AGG - chr1_4:60582273-60582292 None:intergenic 50.0%
GAGCCCAATATCTTCGCTGT+AGG + chr1_4:60582649-60582668 Msa0174800:CDS 50.0%
ATCAAGGAATCTCCCCACCT+AGG + chr1_4:60582680-60582699 Msa0174800:CDS 50.0%
AATGGAGGAGAACATCGCCT+AGG - chr1_4:60582700-60582719 None:intergenic 50.0%
GGATAGTCTCCGTGCAACAA+GGG - chr1_4:60583124-60583143 None:intergenic 50.0%
AGGATAGTCTCCGTGCAACA+AGG - chr1_4:60583125-60583144 None:intergenic 50.0%
GATTCACGACTTGAGAAGGC+AGG - chr1_4:60583181-60583200 None:intergenic 50.0%
!! CTGTGGTTTTGCAGGTGTAG+AGG + chr1_4:60583548-60583567 Msa0174800:intron 50.0%
CTCAGTACCCATTCACACCA+TGG + chr1_4:60583683-60583702 Msa0174800:intron 50.0%
CCTAAAGCCCATGGTGTGAA+TGG - chr1_4:60583694-60583713 None:intergenic 50.0%
CCATTCACACCATGGGCTTT+AGG + chr1_4:60583691-60583710 Msa0174800:CDS 50.0%
AGCACTTGTCCTAAAGCCCA+TGG - chr1_4:60583703-60583722 None:intergenic 50.0%
!! ATGGGCTTTAGGACAAGTGC+TGG + chr1_4:60583702-60583721 Msa0174800:CDS 50.0%
AATAATGAGTTGCGGCGCCA+AGG + chr1_4:60583857-60583876 Msa0174800:intron 50.0%
ATGCGTTGCTTAGTGTCCGT+TGG - chr1_4:60584091-60584110 None:intergenic 50.0%
GGTACAAGATCCTCCCTAGT+TGG + chr1_4:60584516-60584535 Msa0174800:CDS 50.0%
CTCAATAGCACCAACTAGGG+AGG - chr1_4:60584529-60584548 None:intergenic 50.0%
!! TTTGTCGGTTAGCTGGTTCG+TGG + chr1_4:60584666-60584685 Msa0174800:three_prime_UTR 50.0%
GTCAGGCACCTCTGCATATC+AGG + chr1_4:60581195-60581214 Msa0174800:CDS 55.0%
CAAAAAGGGTTTGCCCGTGG+AGG + chr1_4:60581631-60581650 Msa0174800:intron 55.0%
! TGACGGGTCCTCTACCATCT+GGG - chr1_4:60581967-60581986 None:intergenic 55.0%
! TTGACGGGTCCTCTACCATC+TGG - chr1_4:60581968-60581987 None:intergenic 55.0%
!! TGCAATCCCTTCGGGTTGAC+GGG - chr1_4:60581983-60582002 None:intergenic 55.0%
!! CTGCAATCCCTTCGGGTTGA+CGG - chr1_4:60581984-60582003 None:intergenic 55.0%
TGATCTCCCACAGGCACTTG+AGG + chr1_4:60582199-60582218 Msa0174800:CDS 55.0%
AGGAGAACATCGCCTAGGTG+GGG - chr1_4:60582695-60582714 None:intergenic 55.0%
GAGGAGAACATCGCCTAGGT+GGG - chr1_4:60582696-60582715 None:intergenic 55.0%
GGGTTTGCCCGTGGAGGAAA+TGG + chr1_4:60581637-60581656 Msa0174800:intron 60.0%
TAGAGGACCCGTCAACCCGA+AGG + chr1_4:60581973-60581992 Msa0174800:CDS 60.0%
AGAGGACCCGTCAACCCGAA+GGG + chr1_4:60581974-60581993 Msa0174800:CDS 60.0%
GGAGGAGAACATCGCCTAGG+TGG - chr1_4:60582697-60582716 None:intergenic 60.0%
!! TGCGCCCGCATTAGCCTTCA+TGG - chr1_4:60583152-60583171 None:intergenic 60.0%
CAGTGCAGACACGGCTGCAA+AGG + chr1_4:60583303-60583322 Msa0174800:CDS 60.0%
!! GACACGGCTGCAAAGGCACT+TGG + chr1_4:60583310-60583329 Msa0174800:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60580946 60585244 60580946 ID=Msa0174800;Name=Msa0174800
chr1_4 mRNA 60580946 60585244 60580946 ID=Msa0174800-mRNA-1;Parent=Msa0174800;Name=Msa0174800-mRNA-1;_AED=0.15;_eAED=0.15;_QI=130|1|1|1|1|1|13|648|515
chr1_4 exon 60580946 60581216 60580946 ID=Msa0174800-mRNA-1:exon:19160;Parent=Msa0174800-mRNA-1
chr1_4 exon 60581300 60581363 60581300 ID=Msa0174800-mRNA-1:exon:19161;Parent=Msa0174800-mRNA-1
chr1_4 exon 60581638 60581693 60581638 ID=Msa0174800-mRNA-1:exon:19162;Parent=Msa0174800-mRNA-1
chr1_4 exon 60581770 60581845 60581770 ID=Msa0174800-mRNA-1:exon:19163;Parent=Msa0174800-mRNA-1
chr1_4 exon 60581969 60582040 60581969 ID=Msa0174800-mRNA-1:exon:19164;Parent=Msa0174800-mRNA-1
chr1_4 exon 60582168 60582255 60582168 ID=Msa0174800-mRNA-1:exon:19165;Parent=Msa0174800-mRNA-1
chr1_4 exon 60582573 60582831 60582573 ID=Msa0174800-mRNA-1:exon:19166;Parent=Msa0174800-mRNA-1
chr1_4 exon 60582926 60583041 60582926 ID=Msa0174800-mRNA-1:exon:19167;Parent=Msa0174800-mRNA-1
chr1_4 exon 60583111 60583331 60583111 ID=Msa0174800-mRNA-1:exon:19168;Parent=Msa0174800-mRNA-1
chr1_4 exon 60583562 60583590 60583562 ID=Msa0174800-mRNA-1:exon:19169;Parent=Msa0174800-mRNA-1
chr1_4 exon 60583688 60583775 60583688 ID=Msa0174800-mRNA-1:exon:19170;Parent=Msa0174800-mRNA-1
chr1_4 exon 60584087 60584177 60584087 ID=Msa0174800-mRNA-1:exon:19171;Parent=Msa0174800-mRNA-1
chr1_4 exon 60584350 60585244 60584350 ID=Msa0174800-mRNA-1:exon:19172;Parent=Msa0174800-mRNA-1
chr1_4 five_prime_UTR 60580946 60581075 60580946 ID=Msa0174800-mRNA-1:five_prime_utr;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60581076 60581216 60581076 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60581300 60581363 60581300 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60581638 60581693 60581638 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60581770 60581845 60581770 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60581969 60582040 60581969 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60582168 60582255 60582168 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60582573 60582831 60582573 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60582926 60583041 60582926 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60583111 60583331 60583111 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60583562 60583590 60583562 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60583688 60583775 60583688 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60584087 60584177 60584087 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 CDS 60584350 60584596 60584350 ID=Msa0174800-mRNA-1:cds;Parent=Msa0174800-mRNA-1
chr1_4 three_prime_UTR 60584597 60585244 60584597 ID=Msa0174800-mRNA-1:three_prime_utr;Parent=Msa0174800-mRNA-1
Gene Sequence

>Msa0174800

ATGATGGAACCACATACATGTTTGAGTCTTGTTTTCTTTTTGCTTCTAAACTTGGCTGTTGGGGTGTTAAGTACTGATGATTATAGCAGACATGATTTCCCTGTTGACTTTGTTTTTGGGTCAGGCACCTCTGCATATCAGGTGGAAGGAGCTGCTGATGAAGATGGAAGAACTCCTAGCATTTGGGATACCTTTGCACATGCTGGGTTTGCCCGTGGAGGAAATGGAGATGTAGCCTGCGACACGTACCACAAATACAAGGAAGATGTGCAGCTCATGCTTGAAACAGGCCTTGAAGCCTATAGATTTTCCATTTCTTGGTCAAGATTGATACCAAATGGTAGAGGACCCGTCAACCCGAAGGGATTGCAGTACTACAACAATCTTATCAATGAACTCATTAGAAATGGAATCCAACCACATGTCACACTACACAACTATGATCTCCCACAGGCACTTGAGGATGAATATGAAGGATGGCTTAGTCGTGAGGTCATAAAAGACTTCACAAACTATGCAGATGTGTGTTTTAGAGAGTTCGGGGATAGAGTCAAGTATTGGACTACTGTGAACGAGCCCAATATCTTCGCTGTAGGTAGTTATGATCAAGGAATCTCCCCACCTAGGCGATGTTCTCCTCCATTTTGCATTATAGAGAGCACCAAGGGTAACTCAACATTTGAACCGTACTTGGTAGTTCATCATATTTTGCTAGCGCATTCTTCAGCTGTGAGATTGTATAGAAGAACGTACAGGGAGGAACAAAATGGATTTGTTGGTATCTCAATCTATACATTGGGGGTAGTTCCTCAAACAAATACAGAGAAGGACAGGGCTGCATGTCAACGAATTAGCGATTTTTATTTGGGCTGGATTATGGAACCCTTGTTGCACGGAGACTATCCTGATTCCATGAAGGCTAATGCGGGCGCAAGAATTCCTGCCTTCTCAAGTCGTGAATCCGAACAAGTTAAGGGTTCCTATGACTTTATTGGCATAATTCACTACAGCAAATTTGATATCACAGACAATTCTGATGTGCTGAAGACAGAACTGAGAGATTTCAGTGCAGACACGGCTGCAAAGGCACTTGGTGTAGAGGAAATACTTGGAGAGAATGAGTACCCATTCACACCATGGGCTTTAGGACAAGTGCTGGAAACATTCAAGACCCTTTATGGCAATCCACCTATATTCATTCATGAAAATGGCCAACGGACACTAAGCAACGCATCACTTCATGATGAATCAAGGGTGAAATACTTGCATGGATACATTGGTGCCATGCTTGATTCCTTAAGAAATGGATCAAATATGAGGGGATATTTCGTGTGGTCTTTCATTGATGCATTTGAGTTGTTGGATGGATATAAATCGATCTATGGGCTGTACTATGTCGATAGGAATGATCCAGAGTTGAGAAGATACCCAAAGCTATCCGCAAAATGGTACAGCCAATTTTTGAAGGGTACAAGATCCTCCCTAGTTGGTGCTATTGAGCTCAATAAGGATCCATCACTTGTTTCAGTTGGACATTTACTTCAGTAG
Protein sequence

>Msa0174800

MMEPHTCLSLVFFLLLNLAVGVLSTDDYSRHDFPVDFVFGSGTSAYQVEGAADEDGRTPSIWDTFAHAGFARGGNGDVACDTYHKYKEDVQLMLETGLEAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELIRNGIQPHVTLHNYDLPQALEDEYEGWLSREVIKDFTNYADVCFREFGDRVKYWTTVNEPNIFAVGSYDQGISPPRRCSPPFCIIESTKGNSTFEPYLVVHHILLAHSSAVRLYRRTYREEQNGFVGISIYTLGVVPQTNTEKDRAACQRISDFYLGWIMEPLLHGDYPDSMKANAGARIPAFSSRESEQVKGSYDFIGIIHYSKFDITDNSDVLKTELRDFSADTAAKALGVEEILGENEYPFTPWALGQVLETFKTLYGNPPIFIHENGQRTLSNASLHDESRVKYLHGYIGAMLDSLRNGSNMRGYFVWSFIDAFELLDGYKSIYGLYYVDRNDPELRRYPKLSAKWYSQFLKGTRSSLVGAIELNKDPSLVSVGHLLQ*