Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380980 | XP_013461778.1 | 99.215 | 1019 | 8 | 0 | 1 | 1019 | 1 | 1019 | 0.0 | 2073 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380980 | sp|Q37145|ACA1_ARATH | 80.962 | 1019 | 193 | 1 | 1 | 1018 | 1 | 1019 | 0.0 | 1702 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380980 | A0A072V395 | 99.215 | 1019 | 8 | 0 | 1 | 1019 | 1 | 1019 | 0.0 | 2073 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0045810 | Msa0380980 | 0.807643 | 4.571857e-50 | -8.615850e-47 |
Msa0046970 | Msa0380980 | 0.821694 | 3.523641e-53 | -8.615850e-47 |
Msa0143590 | Msa0380980 | 0.810920 | 9.066334e-51 | -8.615850e-47 |
Msa0198210 | Msa0380980 | 0.811099 | 8.292549e-51 | -8.615850e-47 |
Msa0207680 | Msa0380980 | 0.823861 | 1.102601e-53 | -8.615850e-47 |
Msa0209360 | Msa0380980 | 0.829521 | 4.913511e-55 | -8.615850e-47 |
Msa0373050 | Msa0380980 | 0.827929 | 1.192500e-54 | -8.615850e-47 |
Msa0373060 | Msa0380980 | 0.802650 | 5.072281e-49 | -8.615850e-47 |
Msa0380980 | Msa0381100 | 0.980312 | 6.261472e-150 | -8.615850e-47 |
Msa0380980 | Msa0386880 | 0.839483 | 1.542021e-57 | -8.615850e-47 |
Msa0380980 | Msa0430970 | 0.808581 | 2.886786e-50 | -8.615850e-47 |
Msa0380980 | Msa0494950 | 0.807478 | 4.956434e-50 | -8.615850e-47 |
Msa0380980 | Msa0518530 | 0.800230 | 1.588832e-48 | -8.615850e-47 |
Msa0380980 | Msa0519360 | 0.814393 | 1.576668e-51 | -8.615850e-47 |
Msa0380980 | Msa0521890 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
Msa0380980 | Msa0555280 | 0.816626 | 5.020074e-52 | -8.615850e-47 |
Msa0380980 | Msa0575380 | 0.858885 | 6.056620e-63 | -8.615850e-47 |
Msa0380980 | Msa0576180 | 0.881363 | 2.555418e-70 | -8.615850e-47 |
Msa0380980 | Msa0597700 | 0.825002 | 5.942537e-54 | -8.615850e-47 |
Msa0380980 | Msa0606150 | 0.806242 | 9.046330e-50 | -8.615850e-47 |
Msa0380980 | Msa0608820 | 0.829436 | 5.154709e-55 | -8.615850e-47 |
Msa0380980 | Msa0610700 | -0.800680 | 1.286693e-48 | -8.615850e-47 |
Msa0380980 | Msa0691610 | 0.820998 | 5.098718e-53 | -8.615850e-47 |
Msa0380980 | Msa0732970 | 0.804170 | 2.456953e-49 | -8.615850e-47 |
Msa0380980 | Msa0773960 | 0.811158 | 8.051102e-51 | -8.615850e-47 |
Msa0380980 | Msa0868610 | 0.802151 | 6.428808e-49 | -8.615850e-47 |
Msa0380980 | Msa0930210 | 0.841563 | 4.405198e-58 | -8.615850e-47 |
Msa0380980 | Msa0930770 | 0.822322 | 2.520238e-53 | -8.615850e-47 |
Msa0380980 | Msa0932140 | 0.806994 | 6.277188e-50 | -8.615850e-47 |
Msa0380980 | Msa0967780 | 0.805760 | 1.142526e-49 | -8.615850e-47 |
Msa0380980 | Msa0968360 | 0.812876 | 3.399777e-51 | -8.615850e-47 |
Msa0380980 | Msa1013190 | 0.802855 | 4.602654e-49 | -8.615850e-47 |
Msa0380980 | Msa1024570 | 0.816927 | 4.297263e-52 | -8.615850e-47 |
Msa0380980 | Msa1029820 | 0.808043 | 3.760237e-50 | -8.615850e-47 |
Msa0380980 | Msa1031180 | 0.812360 | 4.409005e-51 | -8.615850e-47 |
Msa0380980 | Msa1068940 | 0.809215 | 2.112679e-50 | -8.615850e-47 |
Msa0380980 | Msa1070360 | 0.813580 | 2.381628e-51 | -8.615850e-47 |
Msa0380980 | Msa1088150 | 0.801651 | 8.144057e-49 | -8.615850e-47 |
Msa0380980 | Msa1088160 | 0.809084 | 2.253541e-50 | -8.615850e-47 |
Msa0380980 | Msa1117760 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
Msa0380980 | Msa1119430 | 0.809550 | 1.790285e-50 | -8.615850e-47 |
Msa0380980 | Msa1156710 | 0.810256 | 1.261679e-50 | -8.615850e-47 |
Msa0380980 | Msa1339200 | 0.815088 | 1.105907e-51 | -8.615850e-47 |
Msa0380980 | Msa1365820 | 0.825210 | 5.307290e-54 | -8.615850e-47 |
Msa0380980 | Msa1368390 | 0.811127 | 8.178654e-51 | -8.615850e-47 |
Msa0380980 | Msa1383820 | 0.800642 | 1.309730e-48 | -8.615850e-47 |
Msa0380980 | Msa1404680 | 0.824723 | 6.917197e-54 | -8.615850e-47 |
Msa0380980 | Msa1455400 | 0.828075 | 1.099523e-54 | -8.615850e-47 |
Msa0380980 | Msa1457770 | 0.822812 | 1.938791e-53 | -8.615850e-47 |
Msa0287640 | Msa0380980 | 0.828681 | 7.853002e-55 | -8.615850e-47 |
Msa0287660 | Msa0380980 | 0.806270 | 8.923176e-50 | -8.615850e-47 |
Msa0295680 | Msa0380980 | 0.800833 | 1.197148e-48 | -8.615850e-47 |
Msa0353500 | Msa0380980 | 0.815667 | 8.219970e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380980 | MtrunA17_Chr3g0134771 | 99.215 | 1019 | 8 | 0 | 1 | 1019 | 1 | 1019 | 0.0 | 2073 |
Msa0380980 | MtrunA17_Chr5g0401211 | 79.843 | 1017 | 201 | 3 | 1 | 1016 | 1 | 1014 | 0.0 | 1648 |
Msa0380980 | MtrunA17_Chr4g0054021 | 77.112 | 935 | 209 | 2 | 83 | 1016 | 7 | 937 | 0.0 | 1466 |
Msa0380980 | MtrunA17_Chr1g0173111 | 63.654 | 1007 | 361 | 4 | 11 | 1016 | 9 | 1011 | 0.0 | 1311 |
Msa0380980 | MtrunA17_Chr8g0382071 | 62.414 | 1019 | 375 | 6 | 1 | 1016 | 1 | 1014 | 0.0 | 1295 |
Msa0380980 | MtrunA17_Chr4g0020551 | 62.586 | 874 | 321 | 4 | 75 | 944 | 6 | 877 | 0.0 | 1097 |
Msa0380980 | MtrunA17_Chr8g0355421 | 51.229 | 1017 | 483 | 7 | 1 | 1016 | 1 | 1005 | 0.0 | 995 |
Msa0380980 | MtrunA17_Chr4g0002331 | 48.752 | 1042 | 486 | 14 | 6 | 1016 | 57 | 1081 | 0.0 | 900 |
Msa0380980 | MtrunA17_Chr2g0298871 | 47.826 | 1035 | 500 | 11 | 13 | 1016 | 44 | 1069 | 0.0 | 887 |
Msa0380980 | MtrunA17_Chr6g0456201 | 47.284 | 939 | 455 | 13 | 106 | 1016 | 80 | 1006 | 0.0 | 798 |
Msa0380980 | MtrunA17_Chr7g0260401 | 45.578 | 1029 | 494 | 19 | 34 | 1016 | 31 | 1039 | 0.0 | 789 |
Msa0380980 | MtrunA17_Chr8g0340261 | 47.232 | 542 | 248 | 8 | 491 | 1016 | 22 | 541 | 9.91e-154 | 467 |
Msa0380980 | MtrunA17_Chr2g0334231 | 45.532 | 470 | 229 | 9 | 9 | 466 | 50 | 504 | 2.04e-111 | 355 |
Msa0380980 | MtrunA17_Chr8g0346461 | 31.124 | 845 | 476 | 22 | 132 | 885 | 30 | 859 | 1.17e-99 | 338 |
Msa0380980 | MtrunA17_Chr7g0263361 | 32.729 | 828 | 460 | 24 | 132 | 876 | 42 | 855 | 1.58e-99 | 337 |
Msa0380980 | MtrunA17_Chr8g0340271 | 47.554 | 368 | 182 | 4 | 106 | 462 | 79 | 446 | 3.48e-99 | 322 |
Msa0380980 | MtrunA17_Chr3g0134951 | 30.429 | 815 | 472 | 21 | 139 | 882 | 25 | 815 | 7.12e-82 | 287 |
Msa0380980 | MtrunA17_Chr4g0005551 | 26.452 | 964 | 613 | 26 | 96 | 1016 | 57 | 967 | 8.82e-82 | 286 |
Msa0380980 | MtrunA17_Chr5g0447521 | 25.000 | 932 | 613 | 26 | 106 | 1001 | 110 | 991 | 1.59e-72 | 261 |
Msa0380980 | MtrunA17_Chr2g0334221 | 45.171 | 321 | 155 | 6 | 466 | 772 | 23 | 336 | 1.03e-69 | 236 |
Msa0380980 | MtrunA17_Chr2g0333721 | 26.667 | 720 | 428 | 25 | 121 | 824 | 19 | 654 | 9.67e-48 | 184 |
Msa0380980 | MtrunA17_Chr8g0381711 | 25.130 | 768 | 465 | 21 | 145 | 872 | 37 | 734 | 8.01e-47 | 181 |
Msa0380980 | MtrunA17_Chr2g0298031 | 24.761 | 731 | 451 | 23 | 121 | 831 | 26 | 677 | 2.41e-46 | 180 |
Msa0380980 | MtrunA17_Chr8g0365021 | 25.035 | 715 | 446 | 23 | 121 | 824 | 91 | 726 | 5.22e-46 | 179 |
Msa0380980 | MtrunA17_Chr1g0147981 | 25.136 | 736 | 447 | 26 | 121 | 834 | 38 | 691 | 5.37e-46 | 179 |
Msa0380980 | MtrunA17_Chr3g0138931 | 25.408 | 736 | 445 | 23 | 121 | 834 | 21 | 674 | 7.39e-46 | 179 |
Msa0380980 | MtrunA17_Chr1g0148031 | 24.792 | 722 | 448 | 22 | 131 | 834 | 30 | 674 | 2.84e-45 | 177 |
Msa0380980 | MtrunA17_Chr4g0072131 | 24.339 | 719 | 446 | 22 | 121 | 824 | 24 | 659 | 4.55e-45 | 176 |
Msa0380980 | MtrunA17_Chr4g0065481 | 24.966 | 725 | 437 | 23 | 131 | 831 | 31 | 672 | 5.44e-45 | 176 |
Msa0380980 | MtrunA17_Chr2g0304941 | 23.928 | 723 | 447 | 24 | 131 | 831 | 31 | 672 | 5.27e-44 | 172 |
Msa0380980 | MtrunA17_Chr2g0334201 | 46.341 | 164 | 87 | 1 | 854 | 1016 | 1 | 164 | 7.59e-44 | 157 |
Msa0380980 | MtrunA17_Chr4g0059961 | 25.424 | 590 | 366 | 17 | 241 | 824 | 139 | 660 | 1.13e-41 | 166 |
Msa0380980 | MtrunA17_Chr6g0452721 | 24.470 | 707 | 441 | 21 | 131 | 824 | 32 | 658 | 7.44e-41 | 163 |
Msa0380980 | MtrunA17_Chr8g0335291 | 24.824 | 709 | 441 | 23 | 131 | 824 | 32 | 663 | 5.87e-40 | 160 |
Msa0380980 | MtrunA17_Chr7g0276551 | 26.887 | 424 | 258 | 10 | 405 | 824 | 46 | 421 | 1.86e-35 | 144 |
Msa0380980 | MtrunA17_Chr5g0397621 | 24.258 | 573 | 320 | 16 | 260 | 827 | 378 | 841 | 5.82e-29 | 125 |
Msa0380980 | MtrunA17_Chr2g0297051 | 24.610 | 577 | 332 | 15 | 258 | 829 | 493 | 971 | 7.56e-29 | 125 |
Msa0380980 | MtrunA17_Chr4g0054031 | 67.647 | 68 | 22 | 0 | 1 | 68 | 1 | 68 | 7.33e-27 | 105 |
Msa0380980 | MtrunA17_Chr8g0374391 | 32.955 | 176 | 90 | 3 | 652 | 827 | 36 | 183 | 1.58e-21 | 95.1 |
Msa0380980 | MtrunA17_Chr8g0374331 | 32.955 | 176 | 90 | 3 | 652 | 827 | 43 | 190 | 1.74e-21 | 95.1 |
Msa0380980 | MtrunA17_Chr3g0131151 | 23.916 | 669 | 343 | 25 | 240 | 798 | 257 | 869 | 2.54e-21 | 100 |
Msa0380980 | MtrunA17_Chr8g0339181 | 33.696 | 184 | 93 | 4 | 644 | 827 | 753 | 907 | 2.17e-17 | 87.8 |
Msa0380980 | MtrunA17_Chr8g0363911 | 24.646 | 353 | 178 | 10 | 430 | 704 | 400 | 742 | 5.54e-16 | 83.6 |
Msa0380980 | MtrunA17_Chr4g0052521 | 28.788 | 198 | 112 | 4 | 632 | 829 | 771 | 939 | 5.85e-16 | 83.2 |
Msa0380980 | MtrunA17_Chr4g0020561 | 48.571 | 70 | 36 | 0 | 947 | 1016 | 1 | 70 | 9.72e-14 | 67.8 |
Msa0380980 | MtrunA17_Chr4g0020541 | 48.529 | 68 | 34 | 1 | 1 | 68 | 1 | 67 | 1.48e-13 | 66.6 |
Msa0380980 | MtrunA17_Chr4g0071991 | 30.625 | 160 | 85 | 3 | 647 | 806 | 512 | 645 | 2.08e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0380980 | AT1G27770.4 | 80.962 | 1019 | 193 | 1 | 1 | 1018 | 1 | 1019 | 0.0 | 1702 |
Msa0380980 | AT1G27770.1 | 80.962 | 1019 | 193 | 1 | 1 | 1018 | 1 | 1019 | 0.0 | 1702 |
Msa0380980 | AT4G37640.1 | 78.094 | 1018 | 217 | 5 | 1 | 1016 | 1 | 1014 | 0.0 | 1630 |
Msa0380980 | AT2G22950.1 | 78.214 | 1019 | 215 | 6 | 1 | 1016 | 1 | 1015 | 0.0 | 1623 |
Msa0380980 | AT1G27770.3 | 79.873 | 944 | 189 | 1 | 76 | 1018 | 13 | 956 | 0.0 | 1551 |
Msa0380980 | AT3G57330.1 | 64.123 | 1009 | 351 | 7 | 11 | 1018 | 9 | 1007 | 0.0 | 1287 |
Msa0380980 | AT2G41560.1 | 63.960 | 1010 | 354 | 8 | 11 | 1018 | 9 | 1010 | 0.0 | 1281 |
Msa0380980 | AT3G57330.2 | 64.792 | 960 | 327 | 7 | 60 | 1018 | 3 | 952 | 0.0 | 1242 |
Msa0380980 | AT2G41560.2 | 65.683 | 915 | 305 | 7 | 106 | 1018 | 1 | 908 | 0.0 | 1202 |
Msa0380980 | AT2G41560.3 | 65.683 | 915 | 305 | 7 | 106 | 1018 | 1 | 908 | 0.0 | 1202 |
Msa0380980 | AT2G41560.4 | 65.683 | 915 | 305 | 7 | 106 | 1018 | 1 | 908 | 0.0 | 1202 |
Msa0380980 | AT1G27770.2 | 72.414 | 725 | 189 | 5 | 1 | 723 | 1 | 716 | 0.0 | 1034 |
Msa0380980 | AT1G27770.2 | 84.566 | 311 | 48 | 0 | 708 | 1018 | 635 | 945 | 0.0 | 555 |
Msa0380980 | AT4G29900.1 | 50.097 | 1036 | 482 | 13 | 4 | 1016 | 26 | 1049 | 0.0 | 936 |
Msa0380980 | AT4G29900.2 | 50.097 | 1036 | 482 | 13 | 4 | 1016 | 26 | 1049 | 0.0 | 936 |
Msa0380980 | AT5G57110.1 | 48.544 | 1030 | 489 | 12 | 12 | 1016 | 34 | 1047 | 0.0 | 896 |
Msa0380980 | AT5G57110.3 | 48.544 | 1030 | 489 | 12 | 12 | 1016 | 34 | 1047 | 0.0 | 896 |
Msa0380980 | AT5G57110.2 | 48.544 | 1030 | 489 | 12 | 12 | 1016 | 34 | 1047 | 0.0 | 896 |
Msa0380980 | AT3G21180.1 | 48.594 | 1031 | 484 | 13 | 15 | 1016 | 51 | 1064 | 0.0 | 875 |
Msa0380980 | AT3G63380.1 | 44.821 | 1004 | 511 | 14 | 34 | 1016 | 25 | 1006 | 0.0 | 765 |
Msa0380980 | AT3G22910.1 | 46.064 | 940 | 470 | 12 | 96 | 1016 | 81 | 1002 | 0.0 | 747 |
Msa0380980 | AT5G53010.1 | 35.996 | 1014 | 548 | 27 | 31 | 1003 | 79 | 1032 | 8.81e-151 | 475 |
Msa0380980 | AT5G53010.2 | 36.477 | 721 | 411 | 20 | 31 | 728 | 79 | 775 | 2.68e-105 | 347 |
Msa0380980 | AT4G00900.2 | 31.710 | 842 | 480 | 19 | 121 | 876 | 14 | 846 | 6.01e-100 | 339 |
Msa0380980 | AT4G00900.1 | 31.710 | 842 | 480 | 19 | 121 | 876 | 14 | 846 | 6.01e-100 | 339 |
Msa0380980 | AT1G07670.2 | 33.413 | 832 | 456 | 27 | 126 | 876 | 36 | 850 | 1.31e-98 | 335 |
Msa0380980 | AT1G07670.1 | 33.413 | 832 | 456 | 27 | 126 | 876 | 36 | 850 | 1.31e-98 | 335 |
Msa0380980 | AT1G07810.1 | 33.657 | 823 | 448 | 28 | 135 | 876 | 45 | 850 | 9.81e-97 | 330 |
Msa0380980 | AT1G10130.1 | 31.281 | 812 | 464 | 21 | 135 | 876 | 23 | 810 | 1.66e-87 | 303 |
Msa0380980 | AT1G80660.1 | 25.613 | 734 | 440 | 25 | 108 | 824 | 15 | 659 | 3.74e-48 | 186 |
Msa0380980 | AT1G80660.3 | 25.718 | 731 | 443 | 25 | 108 | 824 | 15 | 659 | 4.76e-48 | 186 |
Msa0380980 | AT1G80660.4 | 25.718 | 731 | 443 | 25 | 108 | 824 | 15 | 659 | 4.78e-48 | 186 |
Msa0380980 | AT2G07560.1 | 25.275 | 728 | 430 | 27 | 131 | 831 | 31 | 671 | 1.06e-46 | 182 |
Msa0380980 | AT1G80660.2 | 26.102 | 590 | 362 | 17 | 241 | 824 | 9 | 530 | 2.44e-46 | 180 |
Msa0380980 | AT3G60330.4 | 25.140 | 716 | 445 | 22 | 131 | 836 | 31 | 665 | 2.63e-46 | 181 |
Msa0380980 | AT3G60330.3 | 25.140 | 716 | 445 | 22 | 131 | 836 | 31 | 665 | 2.63e-46 | 181 |
Msa0380980 | AT3G60330.2 | 25.000 | 716 | 446 | 22 | 131 | 836 | 31 | 665 | 5.92e-46 | 179 |
Msa0380980 | AT3G60330.1 | 25.000 | 716 | 446 | 22 | 131 | 836 | 31 | 665 | 5.92e-46 | 179 |
Msa0380980 | AT2G24520.3 | 24.861 | 720 | 444 | 23 | 131 | 831 | 10 | 651 | 3.42e-45 | 177 |
Msa0380980 | AT2G24520.1 | 24.861 | 720 | 444 | 23 | 131 | 831 | 10 | 651 | 3.42e-45 | 177 |
Msa0380980 | AT1G17260.1 | 25.119 | 629 | 379 | 15 | 241 | 855 | 141 | 691 | 4.19e-45 | 177 |
Msa0380980 | AT2G24520.2 | 24.861 | 720 | 444 | 23 | 131 | 831 | 73 | 714 | 4.53e-45 | 177 |
Msa0380980 | AT5G57350.4 | 24.658 | 730 | 433 | 20 | 131 | 831 | 29 | 670 | 4.53e-44 | 174 |
Msa0380980 | AT5G57350.2 | 24.658 | 730 | 433 | 20 | 131 | 831 | 29 | 670 | 4.53e-44 | 174 |
Msa0380980 | AT5G57350.1 | 24.658 | 730 | 433 | 20 | 131 | 831 | 29 | 670 | 4.53e-44 | 174 |
Msa0380980 | AT3G42640.1 | 24.899 | 739 | 445 | 27 | 121 | 834 | 22 | 675 | 3.09e-42 | 168 |
Msa0380980 | AT4G30190.1 | 23.490 | 745 | 462 | 22 | 131 | 855 | 28 | 684 | 6.60e-41 | 164 |
Msa0380980 | AT5G62670.1 | 24.718 | 708 | 438 | 22 | 131 | 824 | 32 | 658 | 7.30e-41 | 163 |
Msa0380980 | AT2G18960.1 | 23.688 | 743 | 463 | 23 | 131 | 855 | 28 | 684 | 1.18e-40 | 163 |
Msa0380980 | AT3G47950.1 | 24.542 | 709 | 438 | 22 | 131 | 824 | 36 | 662 | 1.77e-40 | 162 |
Msa0380980 | AT3G47950.2 | 24.542 | 709 | 438 | 22 | 131 | 824 | 36 | 662 | 1.77e-40 | 162 |
Msa0380980 | AT2G18960.3 | 23.764 | 627 | 391 | 17 | 241 | 855 | 69 | 620 | 1.03e-39 | 159 |
Msa0380980 | AT2G18960.2 | 23.764 | 627 | 391 | 17 | 241 | 855 | 69 | 620 | 1.03e-39 | 159 |
Msa0380980 | AT4G30190.2 | 22.879 | 778 | 459 | 24 | 131 | 855 | 28 | 717 | 2.64e-37 | 152 |
Msa0380980 | AT5G44790.1 | 25.217 | 690 | 393 | 23 | 163 | 827 | 355 | 946 | 2.98e-32 | 136 |
Msa0380980 | AT5G57350.3 | 24.374 | 439 | 273 | 9 | 405 | 831 | 17 | 408 | 3.04e-32 | 135 |
Msa0380980 | AT2G24520.4 | 24.091 | 440 | 273 | 11 | 405 | 831 | 17 | 408 | 1.84e-30 | 129 |
Msa0380980 | AT5G23630.1 | 24.487 | 633 | 322 | 25 | 239 | 774 | 256 | 829 | 2.02e-20 | 98.2 |
Msa0380980 | AT4G30110.1 | 28.910 | 211 | 123 | 4 | 623 | 831 | 481 | 666 | 7.93e-14 | 76.6 |
Msa0380980 | AT4G30110.2 | 28.910 | 211 | 123 | 4 | 623 | 831 | 481 | 666 | 7.93e-14 | 76.6 |
Msa0380980 | AT4G11730.1 | 21.266 | 395 | 240 | 9 | 241 | 631 | 134 | 461 | 9.11e-12 | 69.7 |
Msa0380980 | AT2G19110.2 | 25.616 | 203 | 114 | 5 | 653 | 855 | 523 | 688 | 9.84e-12 | 70.1 |
Msa0380980 | AT2G19110.3 | 25.616 | 203 | 114 | 5 | 653 | 855 | 523 | 688 | 9.84e-12 | 70.1 |
Msa0380980 | AT2G19110.1 | 25.616 | 203 | 114 | 5 | 653 | 855 | 523 | 688 | 9.84e-12 | 70.1 |
Find 243 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGACAATCATTGCAGTTTA+AGG | 0.103972 | 3_1:-82912199 | Msa0380980:CDS |
GAGACTGCCATCTTGGAATT+TGG | 0.130934 | 3_1:-82911280 | Msa0380980:CDS |
AAATGGAAAGATTGAGATTC+TGG | 0.212944 | 3_1:-82911314 | Msa0380980:CDS |
TTTATGGGTCAACATGATTA+TGG | 0.213842 | 3_1:-82909235 | Msa0380980:CDS |
AGCTTCAGCTTCAAATCTTT+TGG | 0.216230 | 3_1:+82913791 | None:intergenic |
GGAAGTCCTATTCCTATTAA+TGG | 0.218596 | 3_1:-82910944 | Msa0380980:CDS |
AATCATAATTGTTGAATTCT+TGG | 0.221827 | 3_1:-82908629 | Msa0380980:CDS |
AAAGTCCAGCCCGGGGATTT+TGG | 0.228585 | 3_1:-82912395 | Msa0380980:CDS |
CTATCGTCACTGTAGCTAAA+TGG | 0.228891 | 3_1:-82909491 | Msa0380980:CDS |
CGCTTCTTTATAGAATTAAA+TGG | 0.234218 | 3_1:+82911196 | None:intergenic |
AATGGCGTGGCTACCATTAT+TGG | 0.243299 | 3_1:-82911814 | Msa0380980:CDS |
AATCGGAGAAAAGAAATTTA+TGG | 0.256534 | 3_1:-82912435 | Msa0380980:CDS |
GCACTTCATGAAGCAGATAT+TGG | 0.275093 | 3_1:-82909992 | Msa0380980:CDS |
TAAAATAAATTCAGACAATT+AGG | 0.279757 | 3_1:-82908490 | Msa0380980:three_prime_UTR |
CAGACAATTAGGTACATTCT+TGG | 0.302708 | 3_1:-82908479 | Msa0380980:three_prime_UTR |
ACACAAGTGTAACCATTAAT+AGG | 0.310341 | 3_1:+82910932 | None:intergenic |
CTGTGAACACATAATTCTTT+AGG | 0.314922 | 3_1:+82908680 | None:intergenic |
AGAATTCAACAATTATGATT+TGG | 0.325770 | 3_1:+82908632 | None:intergenic |
AACCACAGTTTCAAACTTAG+AGG | 0.327489 | 3_1:+82908586 | None:intergenic |
TTTAGTGGTTGGCATAATAA+TGG | 0.328547 | 3_1:-82912307 | Msa0380980:CDS |
CTAAATTTGGTATTTGTTGC+TGG | 0.329669 | 3_1:-82908337 | Msa0380980:three_prime_UTR |
GAAGAGGTTGTTGCAGTTAC+TGG | 0.330933 | 3_1:-82910037 | Msa0380980:CDS |
GGGCTTGCAATGGGCATTGC+TGG | 0.332868 | 3_1:-82909971 | Msa0380980:CDS |
TCAATATATGATCTACTTCC+TGG | 0.338483 | 3_1:-82912111 | Msa0380980:CDS |
AACTGAGTAGAGACTAAATT+TGG | 0.350202 | 3_1:-82908350 | Msa0380980:three_prime_UTR |
ATCATAATTGTTGAATTCTT+GGG | 0.355823 | 3_1:-82908628 | Msa0380980:CDS |
GCGATGTATATTATATGAAC+TGG | 0.361261 | 3_1:-82908263 | Msa0380980:three_prime_UTR |
AACAATTATGATTTGGAAGA+TGG | 0.361448 | 3_1:+82908639 | None:intergenic |
AGACTGCCATCTTGGAATTT+GGG | 0.362502 | 3_1:-82911279 | Msa0380980:CDS |
CACTTCATGAAGCAGATATT+GGG | 0.363780 | 3_1:-82909991 | Msa0380980:CDS |
TAAGGCACTCGTCCGTCATT+TGG | 0.363836 | 3_1:-82911563 | Msa0380980:CDS |
TATCGTCACTGTAGCTAAAT+GGG | 0.371973 | 3_1:-82909490 | Msa0380980:CDS |
TATATCAATTTGTCACAATC+TGG | 0.375311 | 3_1:-82909086 | Msa0380980:CDS |
CAGATAGAAGAAAAGGATTA+AGG | 0.380842 | 3_1:+82911965 | None:intergenic |
AGTTACTTGAATGAGAATTT+CGG | 0.382977 | 3_1:-82913921 | Msa0380980:CDS |
AGAGATGGAGGAAGCTTTGT+TGG | 0.385667 | 3_1:-82913860 | Msa0380980:CDS |
TTCACTTCTGCTTGTTTGAC+AGG | 0.389146 | 3_1:-82909390 | Msa0380980:intron |
AGCTATTAGACGCTCTAATC+AGG | 0.393785 | 3_1:-82913772 | Msa0380980:intron |
ACCAACTGAGACTGCCATCT+TGG | 0.399147 | 3_1:-82911287 | Msa0380980:CDS |
CACTAGGGTATGCTTATCCA+TGG | 0.400728 | 3_1:+82910081 | None:intergenic |
GATATTGTCCATCTTAATAT+CGG | 0.403549 | 3_1:-82912087 | Msa0380980:CDS |
GAGAGTCTGTAGCCATTTGT+AGG | 0.407489 | 3_1:-82910868 | Msa0380980:CDS |
CAATTCATTTGTATTCTGTC+AGG | 0.411644 | 3_1:-82908986 | Msa0380980:intron |
AAAATTCATGGTGGGGTTGA+GGG | 0.414334 | 3_1:-82912519 | Msa0380980:CDS |
GCAATTAGAGCATAAATAGA+TGG | 0.415276 | 3_1:-82913946 | Msa0380980:exon |
CACTCATTTCACGGAACTCC+GGG | 0.415424 | 3_1:+82910741 | None:intergenic |
AGAATTGCTATAGCAGAATC+AGG | 0.416782 | 3_1:+82911385 | None:intergenic |
TTCAATATCAGATCACTATC+CGG | 0.418969 | 3_1:+82909021 | None:intergenic |
TTTGTTCCAGATAGAAGAAA+AGG | 0.425832 | 3_1:+82911958 | None:intergenic |
AAGTTTCCTTTCCTACCAAC+TGG | 0.427236 | 3_1:+82909150 | None:intergenic |
TGCAGTATTTATGTTGTCTC+CGG | 0.427260 | 3_1:+82910817 | None:intergenic |
ACTTTCTCAGTGTTGGTCCA+AGG | 0.428486 | 3_1:-82911763 | Msa0380980:CDS |
GAAAATTCATGGTGGGGTTG+AGG | 0.433201 | 3_1:-82912520 | Msa0380980:CDS |
CAACAACATTTACAGTTAGC+TGG | 0.435190 | 3_1:+82909427 | None:intergenic |
TAAATTTGAGAAACTGTAGA+TGG | 0.435212 | 3_1:+82908142 | None:intergenic |
AAGGGTCCGGAGAGCTTCAT+TGG | 0.436598 | 3_1:+82911006 | None:intergenic |
GGAGTCCTTGGCATGCCAAT+TGG | 0.436941 | 3_1:-82908547 | Msa0380980:CDS |
ACCGATGGTATGGCGATTGA+AGG | 0.438951 | 3_1:-82910764 | Msa0380980:CDS |
TTGATGCTTGTCGTTCTTTG+TGG | 0.443412 | 3_1:+82911236 | None:intergenic |
ATTACAGTTAGGATGGTTAC+CGG | 0.444569 | 3_1:-82910836 | Msa0380980:CDS |
ATCTTCAAAGCTGCACCAAT+TGG | 0.446311 | 3_1:+82908532 | None:intergenic |
ATTCCTTCTCACTCATTTCA+CGG | 0.447353 | 3_1:+82910732 | None:intergenic |
AGATGATGAAACTCCCTTGC+AGG | 0.449229 | 3_1:-82911845 | Msa0380980:CDS |
TGTTGTGACTTTCTCAGTGT+TGG | 0.449710 | 3_1:-82911770 | Msa0380980:CDS |
TGGCCTAAGGGTGCACAGGA+TGG | 0.454989 | 3_1:-82912279 | Msa0380980:CDS |
ATTTATACATACAGAGAAAC+CGG | 0.455091 | 3_1:+82912032 | None:intergenic |
ATTTATCCTCTCCATGTCTC+TGG | 0.457311 | 3_1:+82908717 | None:intergenic |
CTGTTCTCACATGAAAATCA+AGG | 0.459952 | 3_1:-82908449 | Msa0380980:three_prime_UTR |
TCTCGAACACCAGGACGGAC+TGG | 0.464005 | 3_1:+82910887 | None:intergenic |
TTGGAATTTGGGCTATCACT+TGG | 0.464467 | 3_1:-82911268 | Msa0380980:CDS |
TCAATTCCTGTGTCAACAAT+GGG | 0.464722 | 3_1:-82912482 | Msa0380980:CDS |
TCACTCATTTCACGGAACTC+CGG | 0.466465 | 3_1:+82910740 | None:intergenic |
GTGTAACCATTAATAGGAAT+AGG | 0.467917 | 3_1:+82910938 | None:intergenic |
GAATTTGGGCTATCACTTGG+TGG | 0.472359 | 3_1:-82911265 | Msa0380980:CDS |
CCTGCAGCTTTAACTTCCTC+TGG | 0.474934 | 3_1:+82912603 | None:intergenic |
GACAAATTTGTAGACTCAAA+TGG | 0.475551 | 3_1:-82911091 | Msa0380980:CDS |
GGTTCCCAATGGACATGGTC+TGG | 0.475865 | 3_1:-82911715 | Msa0380980:CDS |
CTTTCTCAGTGTTGGTCCAA+GGG | 0.478827 | 3_1:-82911762 | Msa0380980:CDS |
GTGAAGAAGTTGAAAATTCA+TGG | 0.478970 | 3_1:-82912531 | Msa0380980:CDS |
AGGCTCAATGTCACAGCTAA+AGG | 0.479225 | 3_1:+82911616 | None:intergenic |
GGCCTAAGGGTGCACAGGAT+GGG | 0.479350 | 3_1:-82912278 | Msa0380980:CDS |
AACCCAGTGGGGTAAACTAA+TGG | 0.480790 | 3_1:-82911887 | Msa0380980:CDS |
GCAGATATTGGGCTTGCAAT+GGG | 0.481740 | 3_1:-82909980 | Msa0380980:CDS |
ATCACCAGACCATGTCCATT+GGG | 0.482017 | 3_1:+82911711 | None:intergenic |
CTCAATTCCTGTGTCAACAA+TGG | 0.482527 | 3_1:-82912483 | Msa0380980:CDS |
TGGTATGGCGATTGAAGGCC+CGG | 0.482546 | 3_1:-82910759 | Msa0380980:CDS |
GAGATGGAGGAAGCTTTGTT+GGG | 0.482618 | 3_1:-82913859 | Msa0380980:CDS |
TAGCCATTAGTTTACCCCAC+TGG | 0.484249 | 3_1:+82911884 | None:intergenic |
CCAGAGGAAGTTAAAGCTGC+AGG | 0.485917 | 3_1:-82912603 | Msa0380980:CDS |
TTAAGGTCACTGACGTTCAC+TGG | 0.487193 | 3_1:+82911982 | None:intergenic |
TTGTTAAGAATCGTAAAAGA+AGG | 0.488378 | 3_1:-82913836 | Msa0380980:CDS |
GAAATTTGTGCTGATGAGGC+AGG | 0.489702 | 3_1:-82912576 | Msa0380980:CDS |
AATGGAAAGATTGAGATTCT+GGG | 0.489798 | 3_1:-82911313 | Msa0380980:CDS |
TGTAAGCAAGGCAAAGGGTC+CGG | 0.491855 | 3_1:+82910993 | None:intergenic |
GGTCGGCTGGTATTACAGTT+AGG | 0.492192 | 3_1:-82910847 | Msa0380980:CDS |
CATCCGAGCCTTTACTGAAT+CGG | 0.492608 | 3_1:-82912452 | Msa0380980:CDS |
CATCACCAGACCATGTCCAT+TGG | 0.493492 | 3_1:+82911710 | None:intergenic |
TTACACTTGTGTAGGAATAG+TGG | 0.497674 | 3_1:-82910921 | Msa0380980:CDS |
TGGGAAGATCAAAGAGGTAA+AGG | 0.499283 | 3_1:-82911443 | Msa0380980:CDS |
GAAATTCAGAGTTGCGGTGT+TGG | 0.507524 | 3_1:-82912769 | Msa0380980:CDS |
TCAATATCAGATCACTATCC+GGG | 0.508159 | 3_1:+82909022 | None:intergenic |
ATAAATGAATCAAGTTTGAC+AGG | 0.509890 | 3_1:-82912015 | Msa0380980:CDS |
TGAGAAATCAGAAGAGTCGA+TGG | 0.510967 | 3_1:+82911417 | None:intergenic |
CCCTTGCAGGTAAAACTCAA+TGG | 0.515185 | 3_1:-82911832 | Msa0380980:CDS |
TTGTAAAAGCTTGCATTTGT+GGG | 0.516369 | 3_1:-82911462 | Msa0380980:CDS |
ACAGCTAAAGGTAAACCTTC+AGG | 0.516985 | 3_1:+82911628 | None:intergenic |
AGCAGATATTGGGCTTGCAA+TGG | 0.517774 | 3_1:-82909981 | Msa0380980:CDS |
ATATCTGCTTCATGAAGTGC+TGG | 0.518967 | 3_1:+82909995 | None:intergenic |
AGCCATTAGTTTACCCCACT+GGG | 0.521590 | 3_1:+82911885 | None:intergenic |
ACAGTTCAGGTCACGCGGAA+TGG | 0.524389 | 3_1:-82912150 | Msa0380980:CDS |
GCATCTTGCATGATCCATCC+TGG | 0.524532 | 3_1:+82911932 | None:intergenic |
GGAGATCAAGTCCCTGCTGA+TGG | 0.524767 | 3_1:-82912066 | Msa0380980:CDS |
AGGGTGGCCTAAGGGTGCAC+AGG | 0.525077 | 3_1:-82912283 | Msa0380980:CDS |
GGGAACCTTCTTGCAGCTTG+CGG | 0.525729 | 3_1:+82911731 | None:intergenic |
CGGAAGAAGCACTTCAGAGA+TGG | 0.526799 | 3_1:-82913875 | Msa0380980:CDS |
GTAGCCATTTGTAGGTCGGC+TGG | 0.527651 | 3_1:-82910860 | Msa0380980:CDS |
AATAATGGAAGGGTGGCCTA+AGG | 0.528876 | 3_1:-82912292 | Msa0380980:CDS |
TTGTCCTCAAGTGTTTCACT+AGG | 0.531061 | 3_1:+82910065 | None:intergenic |
GTTGTAAAAGCTTGCATTTG+TGG | 0.531134 | 3_1:-82911463 | Msa0380980:CDS |
TTTAGCCGCAAGCTGCAAGA+AGG | 0.531798 | 3_1:-82911736 | Msa0380980:CDS |
GTTGTTGTTGCTGTTCCTGA+AGG | 0.532165 | 3_1:-82911643 | Msa0380980:CDS |
CTTGAGGACAACATTTGAAG+AGG | 0.532340 | 3_1:-82910053 | Msa0380980:CDS |
TGTGCTCTGTAACCACCATC+AGG | 0.532677 | 3_1:+82911151 | None:intergenic |
GATTTGGAAGATGGCGGTGC+AGG | 0.533227 | 3_1:+82908648 | None:intergenic |
ATTAATGGTTACACTTGTGT+AGG | 0.534072 | 3_1:-82910929 | Msa0380980:CDS |
AAAACCCAAAATCCCCGGGC+TGG | 0.535485 | 3_1:+82912390 | None:intergenic |
TTGGCTGCTTGTGAGACAAT+GGG | 0.535940 | 3_1:-82911544 | Msa0380980:CDS |
GAGGCAGGGACAATTGTTGA+TGG | 0.536587 | 3_1:-82912561 | Msa0380980:CDS |
GTGGTTGGCATAATAATGGA+AGG | 0.536833 | 3_1:-82912303 | Msa0380980:CDS |
TACACTTGTGTAGGAATAGT+GGG | 0.536929 | 3_1:-82910920 | Msa0380980:CDS |
AATTCTATAAAGAAGCGCAT+GGG | 0.540245 | 3_1:-82911190 | Msa0380980:CDS |
CTTGATCTCCGATATTAAGA+TGG | 0.540281 | 3_1:+82912079 | None:intergenic |
GTCAAAGTGAAACTATGTAA+AGG | 0.540997 | 3_1:+82914193 | None:intergenic |
TGTATCATTCAAGTGACTGA+TGG | 0.541682 | 3_1:+82911042 | None:intergenic |
GGGAAGATCAAAGAGGTAAA+GGG | 0.542338 | 3_1:-82911442 | Msa0380980:CDS |
AATACCAGCCGACCTACAAA+TGG | 0.542567 | 3_1:+82910856 | None:intergenic |
TATCAATGTAAGCAAGGCAA+AGG | 0.543394 | 3_1:+82910987 | None:intergenic |
AGAGCACCAGTTGGTAGGAA+AGG | 0.544242 | 3_1:-82909156 | Msa0380980:CDS |
TAAAAGTTGAACCGCAGTGA+GGG | 0.544308 | 3_1:+82909254 | None:intergenic |
TTCATCAACTCATCATTAGG+AGG | 0.544411 | 3_1:+82909180 | None:intergenic |
CAAACTTAGAGGAGATGTGT+TGG | 0.544815 | 3_1:+82908597 | None:intergenic |
GTTCTACAGCTTCCTGATGG+TGG | 0.545715 | 3_1:-82911163 | Msa0380980:CDS |
AAGGGTGCACAGGATGGGAT+TGG | 0.546416 | 3_1:-82912273 | Msa0380980:CDS |
AGAAGTTGAAAATTCATGGT+GGG | 0.547357 | 3_1:-82912527 | Msa0380980:CDS |
GTAGTTCTACAGCTTCCTGA+TGG | 0.548200 | 3_1:-82911166 | Msa0380980:CDS |
GAGATCAAGTCCCTGCTGAT+GGG | 0.548664 | 3_1:-82912065 | Msa0380980:CDS |
ATACGAAAACCCAAAATCCC+CGG | 0.550017 | 3_1:+82912385 | None:intergenic |
GCTTGCGGCTAAATAGCCCT+TGG | 0.550162 | 3_1:+82911746 | None:intergenic |
ATTCACTGAAAGTCCAGCCC+GGG | 0.551795 | 3_1:-82912403 | Msa0380980:CDS |
GTCTGTAGCCATTTGTAGGT+CGG | 0.558865 | 3_1:-82910864 | Msa0380980:CDS |
ATTAAAGATCCAGTCCGTCC+TGG | 0.559454 | 3_1:-82910896 | Msa0380980:CDS |
CATGAATATCAATGTAAGCA+AGG | 0.559724 | 3_1:+82910981 | None:intergenic |
GCCTTCAATCGCCATACCAT+CGG | 0.561530 | 3_1:+82910763 | None:intergenic |
TAATTCTATAAAGAAGCGCA+TGG | 0.564714 | 3_1:-82911191 | Msa0380980:CDS |
AAGATGCTTGTGACTACTGT+TGG | 0.565888 | 3_1:-82911916 | Msa0380980:CDS |
ATCAATGTAAGCAAGGCAAA+GGG | 0.567138 | 3_1:+82910988 | None:intergenic |
GGCTGGTATTACAGTTAGGA+TGG | 0.567797 | 3_1:-82910843 | Msa0380980:CDS |
TCTCCGATTCAGTAAAGGCT+CGG | 0.568788 | 3_1:+82912449 | None:intergenic |
TGGTTACAGAGCACATTGCA+AGG | 0.571260 | 3_1:-82911143 | Msa0380980:CDS |
AATTCACTGAAAGTCCAGCC+CGG | 0.571576 | 3_1:-82912404 | Msa0380980:CDS |
GCTACAGACTCTCGAACACC+AGG | 0.572194 | 3_1:+82910878 | None:intergenic |
CAACAACACCGGAGGTGAAG+TGG | 0.573382 | 3_1:-82911347 | Msa0380980:CDS |
CTCCTCTAAGTTTGAAACTG+TGG | 0.574054 | 3_1:-82908588 | Msa0380980:CDS |
ACTATCTGCAGTGACAAGAC+TGG | 0.574111 | 3_1:-82911511 | Msa0380980:CDS |
CGATGTATATTATATGAACT+GGG | 0.574659 | 3_1:-82908262 | Msa0380980:three_prime_UTR |
GACACAGGAATTGAGTTTGT+CGG | 0.578382 | 3_1:+82912491 | None:intergenic |
AATTTGCCAATGAAGCTCTC+CGG | 0.579182 | 3_1:-82911012 | Msa0380980:CDS |
TCTATCTGGAACAAAAGTCC+AGG | 0.579192 | 3_1:-82911950 | Msa0380980:CDS |
TGAGATCAGTTCCAGAGACA+TGG | 0.579474 | 3_1:-82908728 | Msa0380980:CDS |
TTGGCATGCCAAGGACTCCA+AGG | 0.579534 | 3_1:+82908551 | None:intergenic |
TTTGGCTGCTTGTGAGACAA+TGG | 0.584639 | 3_1:-82911545 | Msa0380980:CDS |
TCCAAGATGGCAGTCTCAGT+TGG | 0.585699 | 3_1:+82911286 | None:intergenic |
TAGAGGAGATGTGTTGGCAT+AGG | 0.587359 | 3_1:+82908603 | None:intergenic |
ATTCTATAAAGAAGCGCATG+GGG | 0.587913 | 3_1:-82911189 | Msa0380980:CDS |
AAGGCGATTGCTAGAGAATG+TGG | 0.588166 | 3_1:-82910794 | Msa0380980:CDS |
TACGAAAACCCAAAATCCCC+GGG | 0.588191 | 3_1:+82912386 | None:intergenic |
GTGATGTGGAGGAATATCAC+GGG | 0.590403 | 3_1:-82909117 | Msa0380980:CDS |
TGATGATGCAATGGAAATTG+TGG | 0.591363 | 3_1:-82911692 | Msa0380980:CDS |
GCTGCACTTCAGTTTATCCA+TGG | 0.592939 | 3_1:-82912738 | Msa0380980:intron |
ACTTTATCAGTAACGTGATG+TGG | 0.593990 | 3_1:-82909131 | Msa0380980:CDS |
TCTCACAAGCAGCCAAATGA+CGG | 0.594170 | 3_1:+82911551 | None:intergenic |
AAGAAGCACTTCAGAGATGG+AGG | 0.596398 | 3_1:-82913872 | Msa0380980:CDS |
ATCATCTAGTATTATTACGT+CGG | 0.598204 | 3_1:+82909524 | None:intergenic |
CTAATGGCTACTCTAAGTGA+AGG | 0.600766 | 3_1:-82911871 | Msa0380980:CDS |
CTCATCATTAGGAGGTTCAG+TGG | 0.601530 | 3_1:+82909188 | None:intergenic |
ATGGTCTGGTGATGATGCAA+TGG | 0.601909 | 3_1:-82911701 | Msa0380980:CDS |
GTTGTTGCAGTTACTGGTGA+TGG | 0.601934 | 3_1:-82910031 | Msa0380980:CDS |
CTGCACCAATTGGCATGCCA+AGG | 0.603179 | 3_1:+82908542 | None:intergenic |
TGAAAAGAGCACCAGTTGGT+AGG | 0.603878 | 3_1:-82909161 | Msa0380980:CDS |
TGATATCCCATTGTTGACAC+AGG | 0.604868 | 3_1:+82912476 | None:intergenic |
ACTAGGGTATGCTTATCCAT+GGG | 0.605184 | 3_1:+82910082 | None:intergenic |
CGTGATGTGGAGGAATATCA+CGG | 0.606398 | 3_1:-82909118 | Msa0380980:CDS |
ATAATGGAAGGGTGGCCTAA+GGG | 0.606626 | 3_1:-82912291 | Msa0380980:CDS |
ATGGCTACTCTAAGTGAAGG+TGG | 0.609062 | 3_1:-82911868 | Msa0380980:CDS |
AAGAAGGTTCCCAATGGACA+TGG | 0.609528 | 3_1:-82911720 | Msa0380980:CDS |
ATCCCATCCTGTGCACCCTT+AGG | 0.610374 | 3_1:+82912276 | None:intergenic |
CTGATGGAGTCTTCATCAAG+TGG | 0.611221 | 3_1:+82911058 | None:intergenic |
TGTTGGAATGAGAACCCAGT+GGG | 0.612543 | 3_1:-82911899 | Msa0380980:CDS |
TGATAGCCCAAATTCCAAGA+TGG | 0.613677 | 3_1:+82911273 | None:intergenic |
AATGGCTCGATCTTCACCCA+TGG | 0.614750 | 3_1:-82910098 | Msa0380980:CDS |
GTTCCGTGAAATGAGTGAGA+AGG | 0.615468 | 3_1:-82910735 | Msa0380980:CDS |
TCTGGAACAAAAGTCCAGGA+TGG | 0.616165 | 3_1:-82911946 | Msa0380980:CDS |
GTATGTTTATGTAGACTGAA+CGG | 0.617413 | 3_1:+82909466 | None:intergenic |
TGTCCTCAAGTGTTTCACTA+GGG | 0.617739 | 3_1:+82910066 | None:intergenic |
ATCTGGTTACTCCAGACAAG+AGG | 0.618702 | 3_1:-82909069 | Msa0380980:CDS |
AAATTTGTGCTGATGAGGCA+GGG | 0.619169 | 3_1:-82912575 | Msa0380980:CDS |
AACATGATTATGGACACACT+TGG | 0.622533 | 3_1:-82909225 | Msa0380980:CDS |
GAAGTTGAAAATTCATGGTG+GGG | 0.622656 | 3_1:-82912526 | Msa0380980:CDS |
AATGGGCATTGCTGGAACCG+AGG | 0.623555 | 3_1:-82909963 | Msa0380980:intron |
AGACAACATAAATACTGCAA+AGG | 0.624901 | 3_1:-82910813 | Msa0380980:CDS |
AGCTGCAAGAAGGTTCCCAA+TGG | 0.626199 | 3_1:-82911726 | Msa0380980:CDS |
TGATTGTCTGTAATCACTAG+TGG | 0.628003 | 3_1:+82912212 | None:intergenic |
GTAGGAGAAATTCAGAGTTG+CGG | 0.630233 | 3_1:-82912775 | Msa0380980:intron |
AAAAGTTGAACCGCAGTGAG+GGG | 0.632663 | 3_1:+82909255 | None:intergenic |
TGCAGCAAGAATTATTTCAG+AGG | 0.634883 | 3_1:+82911117 | None:intergenic |
TCAGTTCCAGAGACATGGAG+AGG | 0.640393 | 3_1:-82908723 | Msa0380980:CDS |
GAATCAATATTCAACAACAC+CGG | 0.643104 | 3_1:-82911358 | Msa0380980:CDS |
AATTATGATTTGGAAGATGG+CGG | 0.648036 | 3_1:+82908642 | None:intergenic |
GCAGGTAAAACTCAATGGCG+TGG | 0.648822 | 3_1:-82911827 | Msa0380980:CDS |
TACAACTCTTATGATACTTG+CGG | 0.650286 | 3_1:-82912346 | Msa0380980:CDS |
AAGCGAGTACAGAGTACCAG+AGG | 0.656350 | 3_1:-82912619 | Msa0380980:CDS |
AAATTACAGTTCAGGTCACG+CGG | 0.657255 | 3_1:-82912155 | Msa0380980:CDS |
GGTTACAGAGCACATTGCAA+GGG | 0.658013 | 3_1:-82911142 | Msa0380980:CDS |
ATACCCTAGTGAAACACTTG+AGG | 0.660631 | 3_1:-82910069 | Msa0380980:CDS |
TGGTTGGCATAATAATGGAA+GGG | 0.660640 | 3_1:-82912302 | Msa0380980:CDS |
TTAAGATGGACAATATCACC+AGG | 0.672667 | 3_1:+82912093 | None:intergenic |
TTGGCATAATAATGGAAGGG+TGG | 0.673229 | 3_1:-82912299 | Msa0380980:CDS |
TTGATGAAAAGAGCACCAGT+TGG | 0.674937 | 3_1:-82909165 | Msa0380980:CDS |
ATCGTCACTGTAGCTAAATG+GGG | 0.675315 | 3_1:-82909489 | Msa0380980:CDS |
TTATCAGTAACGTGATGTGG+AGG | 0.681192 | 3_1:-82909128 | Msa0380980:CDS |
GCTTTGAAGATGATCCCTGT+GGG | 0.689104 | 3_1:-82908520 | Msa0380980:CDS |
AAGAAGTTGAAAATTCATGG+TGG | 0.690167 | 3_1:-82912528 | Msa0380980:CDS |
CAGACTCTCGAACACCAGGA+CGG | 0.694389 | 3_1:+82910882 | None:intergenic |
TTCACTGAAAGTCCAGCCCG+GGG | 0.697317 | 3_1:-82912402 | Msa0380980:CDS |
ATAAAAGTTGAACCGCAGTG+AGG | 0.699134 | 3_1:+82909253 | None:intergenic |
TCAATATTCAACAACACCGG+AGG | 0.705540 | 3_1:-82911355 | Msa0380980:CDS |
CATTTGTGGGAAGATCAAAG+AGG | 0.719442 | 3_1:-82911449 | Msa0380980:CDS |
AGCTTTGAAGATGATCCCTG+TGG | 0.728542 | 3_1:-82908521 | Msa0380980:CDS |
TTCTATAAAGAAGCGCATGG+GGG | 0.729168 | 3_1:-82911188 | Msa0380980:CDS |
AGGAAATGCTCCCCTCACTG+CGG | 0.742396 | 3_1:-82909265 | Msa0380980:CDS |
CTGTTGGAATGAGAACCCAG+TGG | 0.747284 | 3_1:-82911900 | Msa0380980:CDS |
TGATGTGGAGGAATATCACG+GGG | 0.750412 | 3_1:-82909116 | Msa0380980:CDS |
GTTGGAATGAGAACCCAGTG+GGG | 0.793979 | 3_1:-82911898 | Msa0380980:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTTAGTAATATATAAATT+TGG | + | chr3_1:82912513-82912532 | None:intergenic | 10.0% |
!! | ATGATTTATGATATATAAAA+TGG | - | chr3_1:82912543-82912562 | Msa0380980:CDS | 10.0% |
!! | ATGCATTAAATTTAAATCAA+AGG | - | chr3_1:82908694-82908713 | Msa0380980:CDS | 15.0% |
!!! | TTATATTCTATTTTCCTTTT+TGG | + | chr3_1:82909067-82909086 | None:intergenic | 15.0% |
!! | AAAAAGGAAAATAGAATATA+AGG | - | chr3_1:82909066-82909085 | Msa0380980:CDS | 15.0% |
!! | TTGAATTAAAAATTTAGTCA+TGG | - | chr3_1:82909406-82909425 | Msa0380980:CDS | 15.0% |
!!! | ATAGTAAATCTTTAAGAATT+TGG | + | chr3_1:82911866-82911885 | None:intergenic | 15.0% |
!!! | GAAAATATTTTCGTTATTTT+TGG | + | chr3_1:82911984-82912003 | None:intergenic | 15.0% |
!! | TTGTTGTATAGATTAAATAA+TGG | + | chr3_1:82912580-82912599 | None:intergenic | 15.0% |
!! | ATTATTTAATCTATACAACA+AGG | - | chr3_1:82912579-82912598 | Msa0380980:CDS | 15.0% |
!! | TAAAATAAATTCAGACAATT+AGG | - | chr3_1:82913864-82913883 | Msa0380980:CDS | 15.0% |
!! | AACTATGTAAAGGAAAAAAA+AGG | + | chr3_1:82908154-82908173 | None:intergenic | 20.0% |
!!! | AATGCATTAATTTTAAGCAT+TGG | - | chr3_1:82908338-82908357 | Msa0380980:three_prime_UTR | 20.0% |
!!! | AGAATATAAGGATTCAATTT+TGG | - | chr3_1:82909078-82909097 | Msa0380980:CDS | 20.0% |
!!! | TACTTACTTTTATTGTCATA+GGG | - | chr3_1:82909217-82909236 | Msa0380980:CDS | 20.0% |
!! | GGTAATTATCAAACATATAT+CGG | - | chr3_1:82909238-82909257 | Msa0380980:CDS | 20.0% |
!!! | AATTTTTTGGAAATACTAAC+AGG | + | chr3_1:82909365-82909384 | None:intergenic | 20.0% |
!! | TAGTATTTCCAAAAAATTCA+AGG | - | chr3_1:82909367-82909386 | Msa0380980:intron | 20.0% |
!! | TGAGTAATATTGTAATTAGT+AGG | + | chr3_1:82909463-82909482 | None:intergenic | 20.0% |
!!! | ATTCATGATGAATTTTTAGT+TGG | - | chr3_1:82911389-82911408 | Msa0380980:CDS | 20.0% |
!! | TGATATTATTCCAAAAATTC+AGG | - | chr3_1:82911649-82911668 | Msa0380980:CDS | 20.0% |
!!! | TCATAAATGTTTTCAGTAAA+GGG | + | chr3_1:82912204-82912223 | None:intergenic | 20.0% |
!!! | ATCATAAATGTTTTCAGTAA+AGG | + | chr3_1:82912205-82912224 | None:intergenic | 20.0% |
!! | CCAATCAAAAAAATTATTCA+TGG | + | chr3_1:82912458-82912477 | None:intergenic | 20.0% |
!!! | CCATGAATAATTTTTTTGAT+TGG | - | chr3_1:82912455-82912474 | Msa0380980:CDS | 20.0% |
!!! | ATTGGAATTTTTTATGTAGA+GGG | - | chr3_1:82912473-82912492 | Msa0380980:CDS | 20.0% |
!!! | ATAATAAGATTGGATTTTAG+AGG | + | chr3_1:82912703-82912722 | None:intergenic | 20.0% |
!! | CTAAAATCCAATCTTATTAT+TGG | - | chr3_1:82912703-82912722 | Msa0380980:intron | 20.0% |
!!! | ATTTTTTAAAGCCGTTATTT+TGG | - | chr3_1:82912782-82912801 | Msa0380980:intron | 20.0% |
!! | AGAATTCAACAATTATGATT+TGG | + | chr3_1:82913725-82913744 | None:intergenic | 20.0% |
!! | AATCATAATTGTTGAATTCT+TGG | - | chr3_1:82913725-82913744 | Msa0380980:intron | 20.0% |
!! | ATCATAATTGTTGAATTCTT+GGG | - | chr3_1:82913726-82913745 | Msa0380980:intron | 20.0% |
! | AGTTACTTGAATGAGAATTT+CGG | - | chr3_1:82908433-82908452 | Msa0380980:three_prime_UTR | 25.0% |
! | TTGTTAAGAATCGTAAAAGA+AGG | - | chr3_1:82908518-82908537 | Msa0380980:CDS | 25.0% |
! | AAGGAAGTTAAGATAAACAT+AGG | + | chr3_1:82908648-82908667 | None:intergenic | 25.0% |
! | TTTGAGTATTCGTATAAACA+GGG | + | chr3_1:82908834-82908853 | None:intergenic | 25.0% |
! | ATTTGAGTATTCGTATAAAC+AGG | + | chr3_1:82908835-82908854 | None:intergenic | 25.0% |
!!! | GTACTTACTTTTATTGTCAT+AGG | - | chr3_1:82909216-82909235 | Msa0380980:CDS | 25.0% |
! | TATGCAAGATAAGAGTAATA+TGG | + | chr3_1:82909341-82909360 | None:intergenic | 25.0% |
! | AAATTTAGTCATGGAAAGAT+TGG | - | chr3_1:82909415-82909434 | Msa0380980:CDS | 25.0% |
!!! | GCATTTTAAAATTGTTGCAA+AGG | - | chr3_1:82909658-82909677 | Msa0380980:intron | 25.0% |
! | AATCGGAGAAAAGAAATTTA+TGG | - | chr3_1:82909919-82909938 | Msa0380980:intron | 25.0% |
! | GAAGAAAAAAATTACAGTTC+AGG | - | chr3_1:82910191-82910210 | Msa0380980:intron | 25.0% |
! | GATATTGTCCATCTTAATAT+CGG | - | chr3_1:82910267-82910286 | Msa0380980:intron | 25.0% |
! | ATTTATACATACAGAGAAAC+CGG | + | chr3_1:82910325-82910344 | None:intergenic | 25.0% |
! | ATAAATGAATCAAGTTTGAC+AGG | - | chr3_1:82910339-82910358 | Msa0380980:intron | 25.0% |
!!! | ATCGTTCATCATTTTTTTCA+TGG | + | chr3_1:82910772-82910791 | None:intergenic | 25.0% |
! | GAAAAAAATGATGAACGATA+AGG | - | chr3_1:82910773-82910792 | Msa0380980:CDS | 25.0% |
! | CGCTTCTTTATAGAATTAAA+TGG | + | chr3_1:82911161-82911180 | None:intergenic | 25.0% |
! | TTAAGAATTTGGCATGTTTA+TGG | + | chr3_1:82911855-82911874 | None:intergenic | 25.0% |
! | AAGTTTGAATATGCATAACA+AGG | + | chr3_1:82911926-82911945 | None:intergenic | 25.0% |
! | TTTAAATTAATAGTCACGAG+AGG | + | chr3_1:82912045-82912064 | None:intergenic | 25.0% |
!!! | TATCACTATGCTAGTTTTAA+TGG | + | chr3_1:82912098-82912117 | None:intergenic | 25.0% |
! | ACTAGCATAGTGATAATAAA+TGG | - | chr3_1:82912103-82912122 | Msa0380980:CDS | 25.0% |
! | TGGATCATTTGAATATACTA+AGG | - | chr3_1:82912135-82912154 | Msa0380980:CDS | 25.0% |
! | AATTTCTACCATCAATACAT+CGG | + | chr3_1:82912429-82912448 | None:intergenic | 25.0% |
!!! | GATTGGAATTTTTTATGTAG+AGG | - | chr3_1:82912472-82912491 | Msa0380980:CDS | 25.0% |
! | CTAGAAACCAATAATAAGAT+TGG | + | chr3_1:82912713-82912732 | None:intergenic | 25.0% |
! | ATCATCTAGTATTATTACGT+CGG | + | chr3_1:82912833-82912852 | None:intergenic | 25.0% |
! | CTTTGATAAACATGATAACA+AGG | + | chr3_1:82913005-82913024 | None:intergenic | 25.0% |
! | GGGTATTTATATATATCATG+AGG | + | chr3_1:82913069-82913088 | None:intergenic | 25.0% |
! | CATGATATATATAAATACCC+AGG | - | chr3_1:82913069-82913088 | Msa0380980:intron | 25.0% |
! | TATATCAATTTGTCACAATC+TGG | - | chr3_1:82913268-82913287 | Msa0380980:intron | 25.0% |
! | AACTTAGAAAATCATTGTTC+TGG | - | chr3_1:82913393-82913412 | Msa0380980:intron | 25.0% |
! | ACTTAGAAAATCATTGTTCT+GGG | - | chr3_1:82913394-82913413 | Msa0380980:intron | 25.0% |
! | AATATCTTTCTAACCTTTCA+TGG | - | chr3_1:82913493-82913512 | Msa0380980:intron | 25.0% |
! | ATATCTTTCTAACCTTTCAT+GGG | - | chr3_1:82913494-82913513 | Msa0380980:intron | 25.0% |
! | TAGTTTAAACATTTACCACA+GGG | + | chr3_1:82913530-82913549 | None:intergenic | 25.0% |
! | ATAGTTTAAACATTTACCAC+AGG | + | chr3_1:82913531-82913550 | None:intergenic | 25.0% |
! | TGTGGTAAATGTTTAAACTA+TGG | - | chr3_1:82913530-82913549 | Msa0380980:intron | 25.0% |
!! | TTGTATTCAAATGTCTTGTT+AGG | - | chr3_1:82913596-82913615 | Msa0380980:intron | 25.0% |
!! | AACAATTATGATTTGGAAGA+TGG | + | chr3_1:82913718-82913737 | None:intergenic | 25.0% |
!!! | TTTCTAGCTTGAAATTTTGT+AGG | - | chr3_1:82913979-82913998 | Msa0380980:five_prime_UTR | 25.0% |
!!! | TTCTAGCTTGAAATTTTGTA+GGG | - | chr3_1:82913980-82913999 | Msa0380980:five_prime_UTR | 25.0% |
! | CGATGTATATTATATGAACT+GGG | - | chr3_1:82914092-82914111 | Msa0380980:five_prime_UTR | 25.0% |
!!! | TGAGGTACTTTTTCATTATA+CGG | - | chr3_1:82914127-82914146 | Msa0380980:five_prime_UTR | 25.0% |
GTCAAAGTGAAACTATGTAA+AGG | + | chr3_1:82908164-82908183 | None:intergenic | 30.0% | |
GCAATTAGAGCATAAATAGA+TGG | - | chr3_1:82908408-82908427 | Msa0380980:three_prime_UTR | 30.0% | |
TGTGAAACCGAAAAATTCAT+CGG | - | chr3_1:82908459-82908478 | Msa0380980:three_prime_UTR | 30.0% | |
! | ATGAAAGACTGTTTTCTACA+TGG | - | chr3_1:82908798-82908817 | Msa0380980:intron | 30.0% |
ATTCACAATAACTTTCTACG+TGG | + | chr3_1:82908908-82908927 | None:intergenic | 30.0% | |
!!! | ATATGCATTGCTATTTTGCT+TGG | - | chr3_1:82908955-82908974 | Msa0380980:intron | 30.0% |
!!! | TAAGGATTCAATTTTGGCTA+TGG | - | chr3_1:82909084-82909103 | Msa0380980:CDS | 30.0% |
AAAGGAAAAGGACTCAAAAT+TGG | + | chr3_1:82909123-82909142 | None:intergenic | 30.0% | |
AAAATGTGGAGGGAAATAAA+AGG | + | chr3_1:82909141-82909160 | None:intergenic | 30.0% | |
! | TATTGGGTATGAGATTTTGT+CGG | - | chr3_1:82909194-82909213 | Msa0380980:CDS | 30.0% |
TTTCCAAAAAATTCAAGGCA+CGG | - | chr3_1:82909372-82909391 | Msa0380980:intron | 30.0% | |
ATTTCTCCTACAATGTATAG+TGG | + | chr3_1:82909570-82909589 | None:intergenic | 30.0% | |
!!! | TTTTGAAATTTGTGCTGATG+AGG | - | chr3_1:82909774-82909793 | Msa0380980:intron | 30.0% |
GTGAAGAAGTTGAAAATTCA+TGG | - | chr3_1:82909823-82909842 | Msa0380980:intron | 30.0% | |
AAGAAGTTGAAAATTCATGG+TGG | - | chr3_1:82909826-82909845 | Msa0380980:intron | 30.0% | |
AGAAGTTGAAAATTCATGGT+GGG | - | chr3_1:82909827-82909846 | Msa0380980:intron | 30.0% | |
TACAACTCTTATGATACTTG+CGG | - | chr3_1:82910008-82910027 | Msa0380980:CDS | 30.0% | |
TTTAGTGGTTGGCATAATAA+TGG | - | chr3_1:82910047-82910066 | Msa0380980:CDS | 30.0% | |
TCAATATATGATCTACTTCC+TGG | - | chr3_1:82910243-82910262 | Msa0380980:intron | 30.0% | |
CAGATAGAAGAAAAGGATTA+AGG | + | chr3_1:82910392-82910411 | None:intergenic | 30.0% | |
! | CTTAATCCTTTTCTTCTATC+TGG | - | chr3_1:82910390-82910409 | Msa0380980:intron | 30.0% |
TTTGTTCCAGATAGAAGAAA+AGG | + | chr3_1:82910399-82910418 | None:intergenic | 30.0% | |
GCTACCATTATTGGAAAAAT+AGG | - | chr3_1:82910549-82910568 | Msa0380980:intron | 30.0% | |
!!! | TTTTTTTCATGGCAAAAGCA+AGG | + | chr3_1:82910761-82910780 | None:intergenic | 30.0% |
! | AAGCTTTTACAACAGTCATA+TGG | + | chr3_1:82910884-82910903 | None:intergenic | 30.0% |
TTGTAAAAGCTTGCATTTGT+GGG | - | chr3_1:82910892-82910911 | Msa0380980:CDS | 30.0% | |
GAATCAATATTCAACAACAC+CGG | - | chr3_1:82910996-82911015 | Msa0380980:CDS | 30.0% | |
GAAGTGGTCAAAAATGAAAA+TGG | - | chr3_1:82911023-82911042 | Msa0380980:CDS | 30.0% | |
AAATGGAAAGATTGAGATTC+TGG | - | chr3_1:82911040-82911059 | Msa0380980:CDS | 30.0% | |
AATGGAAAGATTGAGATTCT+GGG | - | chr3_1:82911041-82911060 | Msa0380980:CDS | 30.0% | |
! | TAATTCTATAAAGAAGCGCA+TGG | - | chr3_1:82911163-82911182 | Msa0380980:CDS | 30.0% |
! | AATTCTATAAAGAAGCGCAT+GGG | - | chr3_1:82911164-82911183 | Msa0380980:CDS | 30.0% |
GACAAATTTGTAGACTCAAA+TGG | - | chr3_1:82911263-82911282 | Msa0380980:CDS | 30.0% | |
CATGAATATCAATGTAAGCA+AGG | + | chr3_1:82911376-82911395 | None:intergenic | 30.0% | |
GTGTAACCATTAATAGGAAT+AGG | + | chr3_1:82911419-82911438 | None:intergenic | 30.0% | |
ACACAAGTGTAACCATTAAT+AGG | + | chr3_1:82911425-82911444 | None:intergenic | 30.0% | |
ATTAATGGTTACACTTGTGT+AGG | - | chr3_1:82911425-82911444 | Msa0380980:CDS | 30.0% | |
AGACAACATAAATACTGCAA+AGG | - | chr3_1:82911541-82911560 | Msa0380980:CDS | 30.0% | |
! | TTGATATGCACCTGAATTTT+TGG | + | chr3_1:82911662-82911681 | None:intergenic | 30.0% |
! | TTGCTTGACAATTTGTTTGA+AGG | - | chr3_1:82911716-82911735 | Msa0380980:CDS | 30.0% |
!! | TAACTAGACCTTTTAATTCC+AGG | + | chr3_1:82911825-82911844 | None:intergenic | 30.0% |
GAATTAAAAGGTCTAGTTAG+AGG | - | chr3_1:82911826-82911845 | Msa0380980:CDS | 30.0% | |
! | AACGAAAATATTTTCTCGCT+AGG | - | chr3_1:82911989-82912008 | Msa0380980:CDS | 30.0% |
AAAAGAGCCATATGATTACA+TGG | - | chr3_1:82912062-82912081 | Msa0380980:CDS | 30.0% | |
TCAACATCCATGTAATCATA+TGG | + | chr3_1:82912072-82912091 | None:intergenic | 30.0% | |
!! | ATAATAAATGGACTGAGTGA+TGG | - | chr3_1:82912115-82912134 | Msa0380980:CDS | 30.0% |
ATCAATATGTCTAAATCTGC+AGG | - | chr3_1:82912232-82912251 | Msa0380980:CDS | 30.0% | |
GTAATATAGCTTATACCAAG+TGG | - | chr3_1:82912601-82912620 | Msa0380980:CDS | 30.0% | |
ACCTGAAATTGCCAAAATAA+CGG | + | chr3_1:82912796-82912815 | None:intergenic | 30.0% | |
GTATGTTTATGTAGACTGAA+CGG | + | chr3_1:82912891-82912910 | None:intergenic | 30.0% | |
TTTATGGGTCAACATGATTA+TGG | - | chr3_1:82913119-82913138 | Msa0380980:intron | 30.0% | |
! | CTTTTCATCAACTCATCATT+AGG | + | chr3_1:82913180-82913199 | None:intergenic | 30.0% |
! | AAAACAGCTTTTCATCTTGA+TGG | - | chr3_1:82913309-82913328 | Msa0380980:intron | 30.0% |
TTCAATATCAGATCACTATC+CGG | + | chr3_1:82913336-82913355 | None:intergenic | 30.0% | |
CAATTCATTTGTATTCTGTC+AGG | - | chr3_1:82913368-82913387 | Msa0380980:intron | 30.0% | |
CAATCAGAGAACATATTACA+AGG | + | chr3_1:82913558-82913577 | None:intergenic | 30.0% | |
CAAGACATTTGAATACAAGT+AGG | + | chr3_1:82913594-82913613 | None:intergenic | 30.0% | |
!! | GAGAGGATAAATGTTTTTGA+AGG | - | chr3_1:82913648-82913667 | Msa0380980:intron | 30.0% |
CTGTGAACACATAATTCTTT+AGG | + | chr3_1:82913677-82913696 | None:intergenic | 30.0% | |
! | AATTATGATTTGGAAGATGG+CGG | + | chr3_1:82913715-82913734 | None:intergenic | 30.0% |
AGAAAAACACTTGGTTCAAT+CGG | + | chr3_1:82913964-82913983 | None:intergenic | 30.0% | |
TTTCAAGCTAGAAAAACACT+TGG | + | chr3_1:82913973-82913992 | None:intergenic | 30.0% | |
AACTGAGTAGAGACTAAATT+TGG | - | chr3_1:82914004-82914023 | Msa0380980:five_prime_UTR | 30.0% | |
! | CTAAATTTGGTATTTGTTGC+TGG | - | chr3_1:82914017-82914036 | Msa0380980:five_prime_UTR | 30.0% |
GCGATGTATATTATATGAAC+TGG | - | chr3_1:82914091-82914110 | Msa0380980:five_prime_UTR | 30.0% | |
! | ACTGGGATTTTTGTATAATG+AGG | - | chr3_1:82914109-82914128 | Msa0380980:five_prime_UTR | 30.0% |
!!! | GAGGTACTTTTTCATTATAC+GGG | - | chr3_1:82914128-82914147 | Msa0380980:five_prime_UTR | 30.0% |
!!! | AGGTACTTTTTCATTATACG+GGG | - | chr3_1:82914129-82914148 | Msa0380980:five_prime_UTR | 30.0% |
! | GCTTCTTCCGATGAATTTTT+CGG | + | chr3_1:82908469-82908488 | None:intergenic | 35.0% |
! | AGCTTCAGCTTCAAATCTTT+TGG | + | chr3_1:82908566-82908585 | None:intergenic | 35.0% |
ATCCAGATATCATCCTACAA+TGG | - | chr3_1:82908616-82908635 | Msa0380980:CDS | 35.0% | |
TTCCATTGTAGGATGATATC+TGG | + | chr3_1:82908621-82908640 | None:intergenic | 35.0% | |
ACATAGGAAGTTTCCATTGT+AGG | + | chr3_1:82908632-82908651 | None:intergenic | 35.0% | |
CATTGAGATTAGTGAACAGA+AGG | + | chr3_1:82908667-82908686 | None:intergenic | 35.0% | |
!!! | GGTAGTAGTTTTGATGTGAA+TGG | + | chr3_1:82908760-82908779 | None:intergenic | 35.0% |
CATTGAATGTAATGCAGTAG+TGG | + | chr3_1:82908781-82908800 | None:intergenic | 35.0% | |
TCCTTATTATCCGTAGAAAC+CGG | - | chr3_1:82908871-82908890 | Msa0380980:intron | 35.0% | |
TTTGGCAGACAAAAGACTAA+GGG | + | chr3_1:82909049-82909068 | None:intergenic | 35.0% | |
! | TTTTGGCAGACAAAAGACTA+AGG | + | chr3_1:82909050-82909069 | None:intergenic | 35.0% |
! | TAGTCTTTTGTCTGCCAAAA+AGG | - | chr3_1:82909050-82909069 | Msa0380980:CDS | 35.0% |
AAGGACTCAAAATTGGCAAT+GGG | + | chr3_1:82909116-82909135 | None:intergenic | 35.0% | |
AAAGGACTCAAAATTGGCAA+TGG | + | chr3_1:82909117-82909136 | None:intergenic | 35.0% | |
TGGAGGGAAATAAAAGGAAA+AGG | + | chr3_1:82909135-82909154 | None:intergenic | 35.0% | |
! | GTTAGTCTGAAAAATGTGGA+GGG | + | chr3_1:82909151-82909170 | None:intergenic | 35.0% |
! | AGTTAGTCTGAAAAATGTGG+AGG | + | chr3_1:82909152-82909171 | None:intergenic | 35.0% |
! | AGCAGTTAGTCTGAAAAATG+TGG | + | chr3_1:82909155-82909174 | None:intergenic | 35.0% |
ATCTCATACCCAATACAACA+TGG | + | chr3_1:82909189-82909208 | None:intergenic | 35.0% | |
AAACAAGTCCAAACTAAGCA+TGG | + | chr3_1:82909302-82909321 | None:intergenic | 35.0% | |
TTCCAAAAAATTCAAGGCAC+GGG | - | chr3_1:82909373-82909392 | Msa0380980:intron | 35.0% | |
GTAATTAGTAGGATAGTGAG+AGG | + | chr3_1:82909452-82909471 | None:intergenic | 35.0% | |
! | GTAGATTGACTTTCTTACCA+TGG | + | chr3_1:82909636-82909655 | None:intergenic | 35.0% |
GAAGTTGAAAATTCATGGTG+GGG | - | chr3_1:82909828-82909847 | Msa0380980:intron | 35.0% | |
TCAATTCCTGTGTCAACAAT+GGG | - | chr3_1:82909872-82909891 | Msa0380980:intron | 35.0% | |
! | TCTTTTCTCCGATTCAGTAA+AGG | + | chr3_1:82909913-82909932 | None:intergenic | 35.0% |
! | TGGTTGGCATAATAATGGAA+GGG | - | chr3_1:82910052-82910071 | Msa0380980:CDS | 35.0% |
TGATTGTCTGTAATCACTAG+TGG | + | chr3_1:82910145-82910164 | None:intergenic | 35.0% | |
CAGACAATCATTGCAGTTTA+AGG | - | chr3_1:82910155-82910174 | Msa0380980:intron | 35.0% | |
TTAAGATGGACAATATCACC+AGG | + | chr3_1:82910264-82910283 | None:intergenic | 35.0% | |
CTTGATCTCCGATATTAAGA+TGG | + | chr3_1:82910278-82910297 | None:intergenic | 35.0% | |
!! | GAGGCCTATTTTTCCAATAA+TGG | + | chr3_1:82910556-82910575 | None:intergenic | 35.0% |
! | TGATGATGCAATGGAAATTG+TGG | - | chr3_1:82910662-82910681 | Msa0380980:intron | 35.0% |
GTTGTAAAAGCTTGCATTTG+TGG | - | chr3_1:82910891-82910910 | Msa0380980:CDS | 35.0% | |
AGAATTGCTATAGCAGAATC+AGG | + | chr3_1:82910972-82910991 | None:intergenic | 35.0% | |
! | ATTCTATAAAGAAGCGCATG+GGG | - | chr3_1:82911165-82911184 | Msa0380980:CDS | 35.0% |
TGCAGCAAGAATTATTTCAG+AGG | + | chr3_1:82911240-82911259 | None:intergenic | 35.0% | |
TGTATCATTCAAGTGACTGA+TGG | + | chr3_1:82911315-82911334 | None:intergenic | 35.0% | |
ATCAATGTAAGCAAGGCAAA+GGG | + | chr3_1:82911369-82911388 | None:intergenic | 35.0% | |
TATCAATGTAAGCAAGGCAA+AGG | + | chr3_1:82911370-82911389 | None:intergenic | 35.0% | |
GGAAGTCCTATTCCTATTAA+TGG | - | chr3_1:82911410-82911429 | Msa0380980:CDS | 35.0% | |
TTACACTTGTGTAGGAATAG+TGG | - | chr3_1:82911433-82911452 | Msa0380980:CDS | 35.0% | |
TACACTTGTGTAGGAATAGT+GGG | - | chr3_1:82911434-82911453 | Msa0380980:CDS | 35.0% | |
ATTACAGTTAGGATGGTTAC+CGG | - | chr3_1:82911518-82911537 | Msa0380980:CDS | 35.0% | |
TGCAGTATTTATGTTGTCTC+CGG | + | chr3_1:82911540-82911559 | None:intergenic | 35.0% | |
!! | GAATGTGGAATTTTAACCGA+TGG | - | chr3_1:82911575-82911594 | Msa0380980:CDS | 35.0% |
!! | TGGAATTTTAACCGATGGTA+TGG | - | chr3_1:82911580-82911599 | Msa0380980:CDS | 35.0% |
ATTCCTTCTCACTCATTTCA+CGG | + | chr3_1:82911625-82911644 | None:intergenic | 35.0% | |
!! | TCTTACCAGAGTTTGAGTTT+TGG | - | chr3_1:82911748-82911767 | Msa0380980:CDS | 35.0% |
! | TTTGGCGTGCATTTCTTTTA+AGG | - | chr3_1:82911766-82911785 | Msa0380980:CDS | 35.0% |
! | TTGGCGTGCATTTCTTTTAA+GGG | - | chr3_1:82911767-82911786 | Msa0380980:CDS | 35.0% |
! | GCATAACAAGGATTTTGCAT+AGG | + | chr3_1:82911914-82911933 | None:intergenic | 35.0% |
!!! | CACTATGCTAGTTTTAATGG+CGG | + | chr3_1:82912095-82912114 | None:intergenic | 35.0% |
ATGTCTAAATCTGCAGGTAA+TGG | - | chr3_1:82912238-82912257 | Msa0380980:CDS | 35.0% | |
CACTTCATGAAGCAGATATT+GGG | - | chr3_1:82912363-82912382 | Msa0380980:CDS | 35.0% | |
TCTTCATACCGATGTATTGA+TGG | - | chr3_1:82912418-82912437 | Msa0380980:CDS | 35.0% | |
TGAACAAAAACTTCTCCACT+TGG | + | chr3_1:82912619-82912638 | None:intergenic | 35.0% | |
ATAGAACGACAACTAGCTAA+GGG | + | chr3_1:82912750-82912769 | None:intergenic | 35.0% | |
TATAGAACGACAACTAGCTA+AGG | + | chr3_1:82912751-82912770 | None:intergenic | 35.0% | |
TATCGTCACTGTAGCTAAAT+GGG | - | chr3_1:82912864-82912883 | Msa0380980:intron | 35.0% | |
CAACAACATTTACAGTTAGC+TGG | + | chr3_1:82912930-82912949 | None:intergenic | 35.0% | |
TTCATCAACTCATCATTAGG+AGG | + | chr3_1:82913177-82913196 | None:intergenic | 35.0% | |
ACTTTATCAGTAACGTGATG+TGG | - | chr3_1:82913223-82913242 | Msa0380980:intron | 35.0% | |
TCAATATCAGATCACTATCC+GGG | + | chr3_1:82913335-82913354 | None:intergenic | 35.0% | |
AACCACAGTTTCAAACTTAG+AGG | + | chr3_1:82913771-82913790 | None:intergenic | 35.0% | |
!! | TATTTTAGACAGATCCCACA+GGG | + | chr3_1:82913851-82913870 | None:intergenic | 35.0% |
!!! | TTATTTTAGACAGATCCCAC+AGG | + | chr3_1:82913852-82913871 | None:intergenic | 35.0% |
CAGACAATTAGGTACATTCT+TGG | - | chr3_1:82913875-82913894 | Msa0380980:CDS | 35.0% | |
CTGTTCTCACATGAAAATCA+AGG | - | chr3_1:82913905-82913924 | Msa0380980:CDS | 35.0% | |
AGCTATTAGACGCTCTAATC+AGG | - | chr3_1:82908582-82908601 | Msa0380980:CDS | 40.0% | |
TTCGTATAAACAGGGAGTTC+TGG | + | chr3_1:82908826-82908845 | None:intergenic | 40.0% | |
TCCGGTTTCTACGGATAATA+AGG | + | chr3_1:82908875-82908894 | None:intergenic | 40.0% | |
!!! | GCATTGCTATTTTGCTTGGT+TGG | - | chr3_1:82908959-82908978 | Msa0380980:intron | 40.0% |
TCCTGTCTTCCATGTTGTAT+TGG | - | chr3_1:82909177-82909196 | Msa0380980:CDS | 40.0% | |
CCTGTCTTCCATGTTGTATT+GGG | - | chr3_1:82909178-82909197 | Msa0380980:CDS | 40.0% | |
AGTCCAAACTAAGCATGGAA+GGG | + | chr3_1:82909297-82909316 | None:intergenic | 40.0% | |
AAGTCCAAACTAAGCATGGA+AGG | + | chr3_1:82909298-82909317 | None:intergenic | 40.0% | |
!!! | AACCCGTGCCTTGAATTTTT+TGG | + | chr3_1:82909378-82909397 | None:intergenic | 40.0% |
!! | ACTCAAATAGCCTAGCTTTG+TGG | - | chr3_1:82909478-82909497 | Msa0380980:CDS | 40.0% |
!! | CTCAAATAGCCTAGCTTTGT+GGG | - | chr3_1:82909479-82909498 | Msa0380980:CDS | 40.0% |
!! | TCAAATAGCCTAGCTTTGTG+GGG | - | chr3_1:82909480-82909499 | Msa0380980:CDS | 40.0% |
TACAATGTATAGTGGTGGCA+GGG | + | chr3_1:82909562-82909581 | None:intergenic | 40.0% | |
TCTCCTACAATGTATAGTGG+TGG | + | chr3_1:82909567-82909586 | None:intergenic | 40.0% | |
GTAGGAGAAATTCAGAGTTG+CGG | - | chr3_1:82909579-82909598 | Msa0380980:intron | 40.0% | |
AGTAAGTATTTACTCCCTCC+AGG | - | chr3_1:82909700-82909719 | Msa0380980:intron | 40.0% | |
TTGACAAACTTAAGCCTGGA+GGG | + | chr3_1:82909717-82909736 | None:intergenic | 40.0% | |
! | AAATTTGTGCTGATGAGGCA+GGG | - | chr3_1:82909779-82909798 | Msa0380980:intron | 40.0% |
! | AAAATTCATGGTGGGGTTGA+GGG | - | chr3_1:82909835-82909854 | Msa0380980:intron | 40.0% |
GACACAGGAATTGAGTTTGT+CGG | + | chr3_1:82909866-82909885 | None:intergenic | 40.0% | |
CTCAATTCCTGTGTCAACAA+TGG | - | chr3_1:82909871-82909890 | Msa0380980:intron | 40.0% | |
TGATATCCCATTGTTGACAC+AGG | + | chr3_1:82909881-82909900 | None:intergenic | 40.0% | |
ATACGAAAACCCAAAATCCC+CGG | + | chr3_1:82909972-82909991 | None:intergenic | 40.0% | |
!!! | GGGATTTTGGGTTTTCGTAT+GGG | - | chr3_1:82909972-82909991 | Msa0380980:CDS | 40.0% |
! | CTGTGCTTTTGTCTCTTTAG+TGG | - | chr3_1:82910032-82910051 | Msa0380980:CDS | 40.0% |
! | GCTTTTGTCTCTTTAGTGGT+TGG | - | chr3_1:82910036-82910055 | Msa0380980:CDS | 40.0% |
! | GTGGTTGGCATAATAATGGA+AGG | - | chr3_1:82910051-82910070 | Msa0380980:CDS | 40.0% |
! | TTGGCATAATAATGGAAGGG+TGG | - | chr3_1:82910055-82910074 | Msa0380980:CDS | 40.0% |
AAATTACAGTTCAGGTCACG+CGG | - | chr3_1:82910199-82910218 | Msa0380980:intron | 40.0% | |
! | TCTATCTGGAACAAAAGTCC+AGG | - | chr3_1:82910404-82910423 | Msa0380980:intron | 40.0% |
AAGATGCTTGTGACTACTGT+TGG | - | chr3_1:82910438-82910457 | Msa0380980:intron | 40.0% | |
CTAATGGCTACTCTAAGTGA+AGG | - | chr3_1:82910483-82910502 | Msa0380980:intron | 40.0% | |
! | CCATTGAGTTTTACCTGCAA+GGG | + | chr3_1:82910525-82910544 | None:intergenic | 40.0% |
AAGTCACAACAGCGAAAAAG+AGG | + | chr3_1:82910575-82910594 | None:intergenic | 40.0% | |
TGTTGTGACTTTCTCAGTGT+TGG | - | chr3_1:82910584-82910603 | Msa0380980:intron | 40.0% | |
ACAGCTAAAGGTAAACCTTC+AGG | + | chr3_1:82910729-82910748 | None:intergenic | 40.0% | |
CATTTGTGGGAAGATCAAAG+AGG | - | chr3_1:82910905-82910924 | Msa0380980:CDS | 40.0% | |
TGGGAAGATCAAAGAGGTAA+AGG | - | chr3_1:82910911-82910930 | Msa0380980:CDS | 40.0% | |
GGGAAGATCAAAGAGGTAAA+GGG | - | chr3_1:82910912-82910931 | Msa0380980:CDS | 40.0% | |
TGAGAAATCAGAAGAGTCGA+TGG | + | chr3_1:82910940-82910959 | None:intergenic | 40.0% | |
TCAATATTCAACAACACCGG+AGG | - | chr3_1:82910999-82911018 | Msa0380980:CDS | 40.0% | |
! | ATTTTTGACCACTTCACCTC+CGG | + | chr3_1:82911018-82911037 | None:intergenic | 40.0% |
AGACTGCCATCTTGGAATTT+GGG | - | chr3_1:82911075-82911094 | Msa0380980:CDS | 40.0% | |
TGATAGCCCAAATTCCAAGA+TGG | + | chr3_1:82911084-82911103 | None:intergenic | 40.0% | |
TTGGAATTTGGGCTATCACT+TGG | - | chr3_1:82911086-82911105 | Msa0380980:CDS | 40.0% | |
TTGATGCTTGTCGTTCTTTG+TGG | + | chr3_1:82911121-82911140 | None:intergenic | 40.0% | |
! | TTCTATAAAGAAGCGCATGG+GGG | - | chr3_1:82911166-82911185 | Msa0380980:CDS | 40.0% |
AATTTGCCAATGAAGCTCTC+CGG | - | chr3_1:82911342-82911361 | Msa0380980:CDS | 40.0% | |
! | TGGCGTGCATTTCTTTTAAG+GGG | - | chr3_1:82911768-82911787 | Msa0380980:CDS | 40.0% |
!! | GTGCATTTCTTTTAAGGGGT+GGG | - | chr3_1:82911772-82911791 | Msa0380980:CDS | 40.0% |
!! | TGCATTTCTTTTAAGGGGTG+GGG | - | chr3_1:82911773-82911792 | Msa0380980:CDS | 40.0% |
!! | CTTGGTGTCCTGGAATTAAA+AGG | - | chr3_1:82911814-82911833 | Msa0380980:CDS | 40.0% |
ACTAGGGTATGCTTATCCAT+GGG | + | chr3_1:82912275-82912294 | None:intergenic | 40.0% | |
ATACCCTAGTGAAACACTTG+AGG | - | chr3_1:82912285-82912304 | Msa0380980:CDS | 40.0% | |
TGTCCTCAAGTGTTTCACTA+GGG | + | chr3_1:82912291-82912310 | None:intergenic | 40.0% | |
TTGTCCTCAAGTGTTTCACT+AGG | + | chr3_1:82912292-82912311 | None:intergenic | 40.0% | |
CTTGAGGACAACATTTGAAG+AGG | - | chr3_1:82912301-82912320 | Msa0380980:CDS | 40.0% | |
ATATCTGCTTCATGAAGTGC+TGG | + | chr3_1:82912362-82912381 | None:intergenic | 40.0% | |
GCACTTCATGAAGCAGATAT+TGG | - | chr3_1:82912362-82912381 | Msa0380980:CDS | 40.0% | |
GCTAGTTGTCGTTCTATACT+TGG | - | chr3_1:82912753-82912772 | Msa0380980:CDS | 40.0% | |
!!! | GCCGTTATTTTGGCAATTTC+AGG | - | chr3_1:82912792-82912811 | Msa0380980:intron | 40.0% |
CTATCGTCACTGTAGCTAAA+TGG | - | chr3_1:82912863-82912882 | Msa0380980:intron | 40.0% | |
ATCGTCACTGTAGCTAAATG+GGG | - | chr3_1:82912865-82912884 | Msa0380980:intron | 40.0% | |
TTCACTTCTGCTTGTTTGAC+AGG | - | chr3_1:82912964-82912983 | Msa0380980:intron | 40.0% | |
TAAAAGTTGAACCGCAGTGA+GGG | + | chr3_1:82913103-82913122 | None:intergenic | 40.0% | |
ATAAAAGTTGAACCGCAGTG+AGG | + | chr3_1:82913104-82913123 | None:intergenic | 40.0% | |
! | TCACTGCGGTTCAACTTTTA+TGG | - | chr3_1:82913103-82913122 | Msa0380980:intron | 40.0% |
! | CACTGCGGTTCAACTTTTAT+GGG | - | chr3_1:82913104-82913123 | Msa0380980:intron | 40.0% |
!! | TTGATGAAAAGAGCACCAGT+TGG | - | chr3_1:82913189-82913208 | Msa0380980:intron | 40.0% |
AAGTTTCCTTTCCTACCAAC+TGG | + | chr3_1:82913207-82913226 | None:intergenic | 40.0% | |
TTATCAGTAACGTGATGTGG+AGG | - | chr3_1:82913226-82913245 | Msa0380980:intron | 40.0% | |
!!! | AAGCTGTTTTTCCTCTTGTC+TGG | + | chr3_1:82913299-82913318 | None:intergenic | 40.0% |
ATTTATCCTCTCCATGTCTC+TGG | + | chr3_1:82913640-82913659 | None:intergenic | 40.0% | |
CAAACTTAGAGGAGATGTGT+TGG | + | chr3_1:82913760-82913779 | None:intergenic | 40.0% | |
! | CTCCTCTAAGTTTGAAACTG+TGG | - | chr3_1:82913766-82913785 | Msa0380980:intron | 40.0% |
! | TGGTTCATTAGCGTTTTCCT+TGG | - | chr3_1:82913786-82913805 | Msa0380980:CDS | 40.0% |
ATCTTCAAAGCTGCACCAAT+TGG | + | chr3_1:82913825-82913844 | None:intergenic | 40.0% | |
!! | AAGAAGCACTTCAGAGATGG+AGG | - | chr3_1:82908482-82908501 | Msa0380980:three_prime_UTR | 45.0% |
! | AGAGATGGAGGAAGCTTTGT+TGG | - | chr3_1:82908494-82908513 | Msa0380980:exon | 45.0% |
!! | GAGATGGAGGAAGCTTTGTT+GGG | - | chr3_1:82908495-82908514 | Msa0380980:exon | 45.0% |
ACCAGAACTTCCGGTTTCTA+CGG | + | chr3_1:82908884-82908903 | None:intergenic | 45.0% | |
CCCAATACAACATGGAAGAC+AGG | + | chr3_1:82909181-82909200 | None:intergenic | 45.0% | |
!! | CTTTTTCACCCCACAAAGCT+AGG | + | chr3_1:82909491-82909510 | None:intergenic | 45.0% |
!! | CTAGCTTTGTGGGGTGAAAA+AGG | - | chr3_1:82909489-82909508 | Msa0380980:CDS | 45.0% |
TTGTGGGGTGAAAAAGGACA+TGG | - | chr3_1:82909495-82909514 | Msa0380980:CDS | 45.0% | |
CTACAATGTATAGTGGTGGC+AGG | + | chr3_1:82909563-82909582 | None:intergenic | 45.0% | |
CTGCCACCACTATACATTGT+AGG | - | chr3_1:82909561-82909580 | Msa0380980:intron | 45.0% | |
GAAATTCAGAGTTGCGGTGT+TGG | - | chr3_1:82909585-82909604 | Msa0380980:intron | 45.0% | |
GCTGCACTTCAGTTTATCCA+TGG | - | chr3_1:82909616-82909635 | Msa0380980:intron | 45.0% | |
CTTGACAAACTTAAGCCTGG+AGG | + | chr3_1:82909718-82909737 | None:intergenic | 45.0% | |
TCGCTTGACAAACTTAAGCC+TGG | + | chr3_1:82909721-82909740 | None:intergenic | 45.0% | |
! | GAAATTTGTGCTGATGAGGC+AGG | - | chr3_1:82909778-82909797 | Msa0380980:intron | 45.0% |
! | GAAAATTCATGGTGGGGTTG+AGG | - | chr3_1:82909834-82909853 | Msa0380980:intron | 45.0% |
CATCCGAGCCTTTACTGAAT+CGG | - | chr3_1:82909902-82909921 | Msa0380980:intron | 45.0% | |
TCTCCGATTCAGTAAAGGCT+CGG | + | chr3_1:82909908-82909927 | None:intergenic | 45.0% | |
AATTCACTGAAAGTCCAGCC+CGG | - | chr3_1:82909950-82909969 | Msa0380980:intron | 45.0% | |
TACGAAAACCCAAAATCCCC+GGG | + | chr3_1:82909971-82909990 | None:intergenic | 45.0% | |
!!! | GGGGATTTTGGGTTTTCGTA+TGG | - | chr3_1:82909971-82909990 | Msa0380980:CDS | 45.0% |
! | AATAATGGAAGGGTGGCCTA+AGG | - | chr3_1:82910062-82910081 | Msa0380980:CDS | 45.0% |
! | ATAATGGAAGGGTGGCCTAA+GGG | - | chr3_1:82910063-82910082 | Msa0380980:CDS | 45.0% |
ACACAAAAAGCCCATCAGCA+GGG | + | chr3_1:82910302-82910321 | None:intergenic | 45.0% | |
TTAAGGTCACTGACGTTCAC+TGG | + | chr3_1:82910375-82910394 | None:intergenic | 45.0% | |
! | TCTGGAACAAAAGTCCAGGA+TGG | - | chr3_1:82910408-82910427 | Msa0380980:intron | 45.0% |
TGTTGGAATGAGAACCCAGT+GGG | - | chr3_1:82910455-82910474 | Msa0380980:intron | 45.0% | |
AACCCAGTGGGGTAAACTAA+TGG | - | chr3_1:82910467-82910486 | Msa0380980:intron | 45.0% | |
! | AGCCATTAGTTTACCCCACT+GGG | + | chr3_1:82910472-82910491 | None:intergenic | 45.0% |
! | TAGCCATTAGTTTACCCCAC+TGG | + | chr3_1:82910473-82910492 | None:intergenic | 45.0% |
ATGGCTACTCTAAGTGAAGG+TGG | - | chr3_1:82910486-82910505 | Msa0380980:intron | 45.0% | |
AGATGATGAAACTCCCTTGC+AGG | - | chr3_1:82910509-82910528 | Msa0380980:intron | 45.0% | |
CCCTTGCAGGTAAAACTCAA+TGG | - | chr3_1:82910522-82910541 | Msa0380980:intron | 45.0% | |
! | GCCATTGAGTTTTACCTGCA+AGG | + | chr3_1:82910526-82910545 | None:intergenic | 45.0% |
AATGGCGTGGCTACCATTAT+TGG | - | chr3_1:82910540-82910559 | Msa0380980:intron | 45.0% | |
!! | ACTTTCTCAGTGTTGGTCCA+AGG | - | chr3_1:82910591-82910610 | Msa0380980:intron | 45.0% |
!! | CTTTCTCAGTGTTGGTCCAA+GGG | - | chr3_1:82910592-82910611 | Msa0380980:intron | 45.0% |
AAGAAGGTTCCCAATGGACA+TGG | - | chr3_1:82910634-82910653 | Msa0380980:intron | 45.0% | |
ATCACCAGACCATGTCCATT+GGG | + | chr3_1:82910646-82910665 | None:intergenic | 45.0% | |
! | ATGGTCTGGTGATGATGCAA+TGG | - | chr3_1:82910653-82910672 | Msa0380980:intron | 45.0% |
! | GTTGTTGTTGCTGTTCCTGA+AGG | - | chr3_1:82910711-82910730 | Msa0380980:CDS | 45.0% |
AGGCTCAATGTCACAGCTAA+AGG | + | chr3_1:82910741-82910760 | None:intergenic | 45.0% | |
TCTCACAAGCAGCCAAATGA+CGG | + | chr3_1:82910806-82910825 | None:intergenic | 45.0% | |
TTTGGCTGCTTGTGAGACAA+TGG | - | chr3_1:82910809-82910828 | Msa0380980:CDS | 45.0% | |
TTGGCTGCTTGTGAGACAAT+GGG | - | chr3_1:82910810-82910829 | Msa0380980:CDS | 45.0% | |
ACTATCTGCAGTGACAAGAC+TGG | - | chr3_1:82910843-82910862 | Msa0380980:CDS | 45.0% | |
GAGACTGCCATCTTGGAATT+TGG | - | chr3_1:82911074-82911093 | Msa0380980:CDS | 45.0% | |
GAATTTGGGCTATCACTTGG+TGG | - | chr3_1:82911089-82911108 | Msa0380980:CDS | 45.0% | |
! | GTAGTTCTACAGCTTCCTGA+TGG | - | chr3_1:82911188-82911207 | Msa0380980:CDS | 45.0% |
TGGTTACAGAGCACATTGCA+AGG | - | chr3_1:82911211-82911230 | Msa0380980:CDS | 45.0% | |
GGTTACAGAGCACATTGCAA+GGG | - | chr3_1:82911212-82911231 | Msa0380980:CDS | 45.0% | |
CTGATGGAGTCTTCATCAAG+TGG | + | chr3_1:82911299-82911318 | None:intergenic | 45.0% | |
ATTAAAGATCCAGTCCGTCC+TGG | - | chr3_1:82911458-82911477 | Msa0380980:CDS | 45.0% | |
GAGAGTCTGTAGCCATTTGT+AGG | - | chr3_1:82911486-82911505 | Msa0380980:CDS | 45.0% | |
GTCTGTAGCCATTTGTAGGT+CGG | - | chr3_1:82911490-82911509 | Msa0380980:CDS | 45.0% | |
AATACCAGCCGACCTACAAA+TGG | + | chr3_1:82911501-82911520 | None:intergenic | 45.0% | |
GGCTGGTATTACAGTTAGGA+TGG | - | chr3_1:82911511-82911530 | Msa0380980:CDS | 45.0% | |
AAGGCGATTGCTAGAGAATG+TGG | - | chr3_1:82911560-82911579 | Msa0380980:CDS | 45.0% | |
TCACTCATTTCACGGAACTC+CGG | + | chr3_1:82911617-82911636 | None:intergenic | 45.0% | |
GTTCCGTGAAATGAGTGAGA+AGG | - | chr3_1:82911619-82911638 | Msa0380980:CDS | 45.0% | |
!! | CGTGCATTTCTTTTAAGGGG+TGG | - | chr3_1:82911771-82911790 | Msa0380980:CDS | 45.0% |
!! | GCATTTCTTTTAAGGGGTGG+GGG | - | chr3_1:82911774-82911793 | Msa0380980:CDS | 45.0% |
GTGGGGTACATGAATGAACT+TGG | - | chr3_1:82911796-82911815 | Msa0380980:CDS | 45.0% | |
!! | CATGAATGAACTTGGTGTCC+TGG | - | chr3_1:82911804-82911823 | Msa0380980:CDS | 45.0% |
! | CTAAGGTGATTTTCAGAGCC+TGG | - | chr3_1:82912152-82912171 | Msa0380980:CDS | 45.0% |
AGAGCCTGGAAGTAAAAGCT+TGG | - | chr3_1:82912166-82912185 | Msa0380980:CDS | 45.0% | |
! | ACCACCAAGCTTTTACTTCC+AGG | + | chr3_1:82912173-82912192 | None:intergenic | 45.0% |
CACTAGGGTATGCTTATCCA+TGG | + | chr3_1:82912276-82912295 | None:intergenic | 45.0% | |
GAAGAGGTTGTTGCAGTTAC+TGG | - | chr3_1:82912317-82912336 | Msa0380980:CDS | 45.0% | |
GTTGTTGCAGTTACTGGTGA+TGG | - | chr3_1:82912323-82912342 | Msa0380980:CDS | 45.0% | |
AGCAGATATTGGGCTTGCAA+TGG | - | chr3_1:82912373-82912392 | Msa0380980:CDS | 45.0% | |
GCAGATATTGGGCTTGCAAT+GGG | - | chr3_1:82912374-82912393 | Msa0380980:CDS | 45.0% | |
ATCGGTATGAAGACGTACCT+CGG | + | chr3_1:82912411-82912430 | None:intergenic | 45.0% | |
AAAAGTTGAACCGCAGTGAG+GGG | + | chr3_1:82913102-82913121 | None:intergenic | 45.0% | |
CTCATCATTAGGAGGTTCAG+TGG | + | chr3_1:82913169-82913188 | None:intergenic | 45.0% | |
!! | TGAAAAGAGCACCAGTTGGT+AGG | - | chr3_1:82913193-82913212 | Msa0380980:intron | 45.0% |
CGTGATGTGGAGGAATATCA+CGG | - | chr3_1:82913236-82913255 | Msa0380980:intron | 45.0% | |
GTGATGTGGAGGAATATCAC+GGG | - | chr3_1:82913237-82913256 | Msa0380980:intron | 45.0% | |
TGATGTGGAGGAATATCACG+GGG | - | chr3_1:82913238-82913257 | Msa0380980:intron | 45.0% | |
ATCTGGTTACTCCAGACAAG+AGG | - | chr3_1:82913285-82913304 | Msa0380980:intron | 45.0% | |
!! | AGCTTTTCATCTTGATGGCC+CGG | - | chr3_1:82913314-82913333 | Msa0380980:intron | 45.0% |
TGAGATCAGTTCCAGAGACA+TGG | - | chr3_1:82913626-82913645 | Msa0380980:intron | 45.0% | |
! | TAGAGGAGATGTGTTGGCAT+AGG | + | chr3_1:82913754-82913773 | None:intergenic | 45.0% |
!! | AGCTTTGAAGATGATCCCTG+TGG | - | chr3_1:82913833-82913852 | Msa0380980:CDS | 45.0% |
!! | GCTTTGAAGATGATCCCTGT+GGG | - | chr3_1:82913834-82913853 | Msa0380980:CDS | 45.0% |
!! | GGCAACTTTTTGAAGAGACG+AGG | + | chr3_1:82913943-82913962 | None:intergenic | 45.0% |
!! | CGGAAGAAGCACTTCAGAGA+TGG | - | chr3_1:82908479-82908498 | Msa0380980:three_prime_UTR | 50.0% |
TCCGTAGAAACCGGAAGTTC+TGG | - | chr3_1:82908880-82908899 | Msa0380980:intron | 50.0% | |
CTACGTGGTACCAGAACTTC+CGG | + | chr3_1:82908893-82908912 | None:intergenic | 50.0% | |
CAAACTAAGCATGGAAGGGC+AGG | + | chr3_1:82909293-82909312 | None:intergenic | 50.0% | |
CTGCCCTTCCATGCTTAGTT+TGG | - | chr3_1:82909291-82909310 | Msa0380980:intron | 50.0% | |
! | AAGCGAGTACAGAGTACCAG+AGG | - | chr3_1:82909735-82909754 | Msa0380980:intron | 50.0% |
! | CCTGCAGCTTTAACTTCCTC+TGG | + | chr3_1:82909754-82909773 | None:intergenic | 50.0% |
CCAGAGGAAGTTAAAGCTGC+AGG | - | chr3_1:82909751-82909770 | Msa0380980:intron | 50.0% | |
GAGGCAGGGACAATTGTTGA+TGG | - | chr3_1:82909793-82909812 | Msa0380980:intron | 50.0% | |
ATTCACTGAAAGTCCAGCCC+GGG | - | chr3_1:82909951-82909970 | Msa0380980:intron | 50.0% | |
GAGATCAAGTCCCTGCTGAT+GGG | - | chr3_1:82910289-82910308 | Msa0380980:intron | 50.0% | |
GACACAAAAAGCCCATCAGC+AGG | + | chr3_1:82910303-82910322 | None:intergenic | 50.0% | |
!!! | GCTGATGGGCTTTTTGTGTC+CGG | - | chr3_1:82910303-82910322 | Msa0380980:intron | 50.0% |
GCATCTTGCATGATCCATCC+TGG | + | chr3_1:82910425-82910444 | None:intergenic | 50.0% | |
CTGTTGGAATGAGAACCCAG+TGG | - | chr3_1:82910454-82910473 | Msa0380980:intron | 50.0% | |
GTTGGAATGAGAACCCAGTG+GGG | - | chr3_1:82910456-82910475 | Msa0380980:intron | 50.0% | |
GCAGGTAAAACTCAATGGCG+TGG | - | chr3_1:82910527-82910546 | Msa0380980:intron | 50.0% | |
TTTAGCCGCAAGCTGCAAGA+AGG | - | chr3_1:82910618-82910637 | Msa0380980:intron | 50.0% | |
AGCTGCAAGAAGGTTCCCAA+TGG | - | chr3_1:82910628-82910647 | Msa0380980:intron | 50.0% | |
CATCACCAGACCATGTCCAT+TGG | + | chr3_1:82910647-82910666 | None:intergenic | 50.0% | |
! | TAAGGCACTCGTCCGTCATT+TGG | - | chr3_1:82910791-82910810 | Msa0380980:CDS | 50.0% |
ACCAACTGAGACTGCCATCT+TGG | - | chr3_1:82911067-82911086 | Msa0380980:CDS | 50.0% | |
TCCAAGATGGCAGTCTCAGT+TGG | + | chr3_1:82911071-82911090 | None:intergenic | 50.0% | |
GTTCTACAGCTTCCTGATGG+TGG | - | chr3_1:82911191-82911210 | Msa0380980:CDS | 50.0% | |
TGTGCTCTGTAACCACCATC+AGG | + | chr3_1:82911206-82911225 | None:intergenic | 50.0% | |
TGTAAGCAAGGCAAAGGGTC+CGG | + | chr3_1:82911364-82911383 | None:intergenic | 50.0% | |
GGTCGGCTGGTATTACAGTT+AGG | - | chr3_1:82911507-82911526 | Msa0380980:CDS | 50.0% | |
ACCGATGGTATGGCGATTGA+AGG | - | chr3_1:82911590-82911609 | Msa0380980:CDS | 50.0% | |
GCCTTCAATCGCCATACCAT+CGG | + | chr3_1:82911594-82911613 | None:intergenic | 50.0% | |
CACTCATTTCACGGAACTCC+GGG | + | chr3_1:82911616-82911635 | None:intergenic | 50.0% | |
GCACGCCAAAACTCAAACTC+TGG | + | chr3_1:82911756-82911775 | None:intergenic | 50.0% | |
!! | TTTCTTTTAAGGGGTGGGGG+TGG | - | chr3_1:82911777-82911796 | Msa0380980:CDS | 50.0% |
!! | TTCTTTTAAGGGGTGGGGGT+GGG | - | chr3_1:82911778-82911797 | Msa0380980:CDS | 50.0% |
GCCTGGAAGTAAAAGCTTGG+TGG | - | chr3_1:82912169-82912188 | Msa0380980:CDS | 50.0% | |
AATGGCTCGATCTTCACCCA+TGG | - | chr3_1:82912256-82912275 | Msa0380980:CDS | 50.0% | |
!! | AGAGCACCAGTTGGTAGGAA+AGG | - | chr3_1:82913198-82913217 | Msa0380980:intron | 50.0% |
GGAATCTCAGCACCCATGAA+AGG | + | chr3_1:82913509-82913528 | None:intergenic | 50.0% | |
TCAGTTCCAGAGACATGGAG+AGG | - | chr3_1:82913631-82913650 | Msa0380980:intron | 50.0% | |
! | AGCGTTTTCCTTGGAGTCCT+TGG | - | chr3_1:82913795-82913814 | Msa0380980:CDS | 50.0% |
TTCACTGAAAGTCCAGCCCG+GGG | - | chr3_1:82909952-82909971 | Msa0380980:intron | 55.0% | |
! | AAAGTCCAGCCCGGGGATTT+TGG | - | chr3_1:82909959-82909978 | Msa0380980:intron | 55.0% |
! | AAGTCCAGCCCGGGGATTTT+GGG | - | chr3_1:82909960-82909979 | Msa0380980:intron | 55.0% |
AAAACCCAAAATCCCCGGGC+TGG | + | chr3_1:82909967-82909986 | None:intergenic | 55.0% | |
ATCCCATCCTGTGCACCCTT+AGG | + | chr3_1:82910081-82910100 | None:intergenic | 55.0% | |
! | AAGGGTGCACAGGATGGGAT+TGG | - | chr3_1:82910081-82910100 | Msa0380980:CDS | 55.0% |
ACAGTTCAGGTCACGCGGAA+TGG | - | chr3_1:82910204-82910223 | Msa0380980:intron | 55.0% | |
GGAGATCAAGTCCCTGCTGA+TGG | - | chr3_1:82910288-82910307 | Msa0380980:intron | 55.0% | |
GCTTGCGGCTAAATAGCCCT+TGG | + | chr3_1:82910611-82910630 | None:intergenic | 55.0% | |
GGGAACCTTCTTGCAGCTTG+CGG | + | chr3_1:82910626-82910645 | None:intergenic | 55.0% | |
GGTTCCCAATGGACATGGTC+TGG | - | chr3_1:82910639-82910658 | Msa0380980:intron | 55.0% | |
CAACAACACCGGAGGTGAAG+TGG | - | chr3_1:82911007-82911026 | Msa0380980:CDS | 55.0% | |
AAGGGTCCGGAGAGCTTCAT+TGG | + | chr3_1:82911351-82911370 | None:intergenic | 55.0% | |
CAGACTCTCGAACACCAGGA+CGG | + | chr3_1:82911475-82911494 | None:intergenic | 55.0% | |
GCTACAGACTCTCGAACACC+AGG | + | chr3_1:82911479-82911498 | None:intergenic | 55.0% | |
GTAGCCATTTGTAGGTCGGC+TGG | - | chr3_1:82911494-82911513 | Msa0380980:CDS | 55.0% | |
TGGTATGGCGATTGAAGGCC+CGG | - | chr3_1:82911595-82911614 | Msa0380980:CDS | 55.0% | |
!! | TCTTTTAAGGGGTGGGGGTG+GGG | - | chr3_1:82911779-82911798 | Msa0380980:CDS | 55.0% |
! | AATGGGCATTGCTGGAACCG+AGG | - | chr3_1:82912391-82912410 | Msa0380980:CDS | 55.0% |
!! | CAGTGAGGGGAGCATTTCCT+GGG | + | chr3_1:82913089-82913108 | None:intergenic | 55.0% |
AGGAAATGCTCCCCTCACTG+CGG | - | chr3_1:82913089-82913108 | Msa0380980:intron | 55.0% | |
!! | ATGGGTGCTGAGATTCCCTG+TGG | - | chr3_1:82913512-82913531 | Msa0380980:intron | 55.0% |
! | GATTTGGAAGATGGCGGTGC+AGG | + | chr3_1:82913709-82913728 | None:intergenic | 55.0% |
TTGGCATGCCAAGGACTCCA+AGG | + | chr3_1:82913806-82913825 | None:intergenic | 55.0% | |
GGAGTCCTTGGCATGCCAAT+TGG | - | chr3_1:82913807-82913826 | Msa0380980:CDS | 55.0% | |
CTGCACCAATTGGCATGCCA+AGG | + | chr3_1:82913815-82913834 | None:intergenic | 55.0% | |
! | TGGCCTAAGGGTGCACAGGA+TGG | - | chr3_1:82910075-82910094 | Msa0380980:CDS | 60.0% |
! | GGCCTAAGGGTGCACAGGAT+GGG | - | chr3_1:82910076-82910095 | Msa0380980:CDS | 60.0% |
TCTCGAACACCAGGACGGAC+TGG | + | chr3_1:82911470-82911489 | None:intergenic | 60.0% | |
! | GGGCTTGCAATGGGCATTGC+TGG | - | chr3_1:82912383-82912402 | Msa0380980:CDS | 60.0% |
!! | GCAGTGAGGGGAGCATTTCC+TGG | + | chr3_1:82913090-82913109 | None:intergenic | 60.0% |
! | AGGGTGGCCTAAGGGTGCAC+AGG | - | chr3_1:82910071-82910090 | Msa0380980:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 82908146 | 82914230 | 82908146 | ID=Msa0380980;Name=Msa0380980 |
chr3_1 | mRNA | 82908146 | 82914230 | 82908146 | ID=Msa0380980-mRNA-1;Parent=Msa0380980;Name=Msa0380980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=281|1|1|1|1|1|7|364|1019 |
chr3_1 | exon | 82908146 | 82908758 | 82908146 | ID=Msa0380980-mRNA-1:exon:21218;Parent=Msa0380980-mRNA-1 |
chr3_1 | exon | 82908987 | 82909285 | 82908987 | ID=Msa0380980-mRNA-1:exon:21217;Parent=Msa0380980-mRNA-1 |
chr3_1 | exon | 82909391 | 82909562 | 82909391 | ID=Msa0380980-mRNA-1:exon:21216;Parent=Msa0380980-mRNA-1 |
chr3_1 | exon | 82909964 | 82910122 | 82909964 | ID=Msa0380980-mRNA-1:exon:21215;Parent=Msa0380980-mRNA-1 |
chr3_1 | exon | 82910706 | 82912654 | 82910706 | ID=Msa0380980-mRNA-1:exon:21214;Parent=Msa0380980-mRNA-1 |
chr3_1 | exon | 82912739 | 82912793 | 82912739 | ID=Msa0380980-mRNA-1:exon:21213;Parent=Msa0380980-mRNA-1 |
chr3_1 | exon | 82913773 | 82914230 | 82913773 | ID=Msa0380980-mRNA-1:exon:21212;Parent=Msa0380980-mRNA-1 |
chr3_1 | five_prime_UTR | 82913950 | 82914230 | 82913950 | ID=Msa0380980-mRNA-1:five_prime_utr;Parent=Msa0380980-mRNA-1 |
chr3_1 | CDS | 82913773 | 82913949 | 82913773 | ID=Msa0380980-mRNA-1:cds;Parent=Msa0380980-mRNA-1 |
chr3_1 | CDS | 82912739 | 82912793 | 82912739 | ID=Msa0380980-mRNA-1:cds;Parent=Msa0380980-mRNA-1 |
chr3_1 | CDS | 82910706 | 82912654 | 82910706 | ID=Msa0380980-mRNA-1:cds;Parent=Msa0380980-mRNA-1 |
chr3_1 | CDS | 82909964 | 82910122 | 82909964 | ID=Msa0380980-mRNA-1:cds;Parent=Msa0380980-mRNA-1 |
chr3_1 | CDS | 82909391 | 82909562 | 82909391 | ID=Msa0380980-mRNA-1:cds;Parent=Msa0380980-mRNA-1 |
chr3_1 | CDS | 82908987 | 82909285 | 82908987 | ID=Msa0380980-mRNA-1:cds;Parent=Msa0380980-mRNA-1 |
chr3_1 | CDS | 82908510 | 82908758 | 82908510 | ID=Msa0380980-mRNA-1:cds;Parent=Msa0380980-mRNA-1 |
chr3_1 | three_prime_UTR | 82908146 | 82908509 | 82908146 | ID=Msa0380980-mRNA-1:three_prime_utr;Parent=Msa0380980-mRNA-1 |
Gene Sequence |
Protein sequence |