AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521940 MtrunA17_Chr3g0140351 97.605 835 6 2 1 821 1 835 0.0 1678
Msa0521940 MtrunA17_Chr2g0331131 80.240 835 143 5 8 821 3 836 0.0 1403
Msa0521940 MtrunA17_Chr8g0340411 79.401 835 148 5 7 821 2 832 0.0 1395
Msa0521940 MtrunA17_Chr2g0292391 65.588 834 253 10 16 821 9 836 0.0 1132
Msa0521940 MtrunA17_Chr4g0028991 64.130 828 270 8 16 821 24 846 0.0 1089
Msa0521940 MtrunA17_Chr2g0326731 60.567 847 297 11 2 821 3 839 0.0 1026
Msa0521940 MtrunA17_Chr2g0322731 24.275 655 346 26 20 576 103 705 7.87e-27 117
Msa0521940 MtrunA17_Chr8g0350321 21.856 485 296 17 204 658 375 806 2.17e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521940 AT4G32880.1 78.623 828 150 9 16 821 11 833 0.0 1347
Msa0521940 AT1G52150.1 77.078 842 165 7 2 821 1 836 0.0 1338
Msa0521940 AT1G52150.2 76.987 843 165 8 2 821 1 837 0.0 1334
Msa0521940 AT1G52150.3 76.448 794 159 7 2 773 1 788 0.0 1241
Msa0521940 AT2G34710.1 64.061 857 267 11 1 821 1 852 0.0 1082
Msa0521940 AT1G30490.1 61.820 846 276 10 9 821 10 841 0.0 1056
Msa0521940 AT5G60690.1 61.853 831 279 10 18 821 23 842 0.0 1029
Msa0521940 AT5G32670.1 63.514 74 27 0 284 357 37 110 1.90e-23 99.0
Msa0521940 AT1G79840.2 23.520 625 360 27 20 576 133 707 3.34e-22 102
Msa0521940 AT1G79840.1 23.520 625 360 27 20 576 104 678 4.24e-22 102
Msa0521940 AT1G79840.3 23.520 625 360 27 20 576 46 620 4.24e-22 102
Msa0521940 AT1G79840.6 23.520 625 360 27 20 576 46 620 4.24e-22 102
Msa0521940 AT1G79840.4 23.764 526 314 23 20 486 104 601 2.17e-20 96.7
Msa0521940 AT3G03260.1 22.036 717 404 31 11 623 15 680 1.86e-13 74.7
Msa0521940 AT1G05230.8 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.4 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.9 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.10 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.7 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.11 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.2 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.6 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.5 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT1G05230.1 21.031 485 287 16 204 659 300 717 1.15e-12 72.4
Msa0521940 AT3G03260.2 22.840 486 254 21 11 400 15 475 1.27e-12 71.6

Find 236 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATCTTATCTATGGTATT+TGG 0.142289 3_4:+75016426 Msa0521940:three_prime_UTR
ACTATACCTGCTGCATTATC+TGG 0.179885 3_4:-75016034 None:intergenic
GGTTCTGTGTTGCTCTTTAA+AGG 0.201093 3_4:+75015705 Msa0521940:CDS
TTTAGGCTTTACGTCATTTA+AGG 0.217346 3_4:+75013555 Msa0521940:intron
GTGACAGTTGTTGGTTGTTA+TGG 0.229174 3_4:-75010742 None:intergenic
TATAAATATACCTTCTGTTC+TGG 0.245843 3_4:-75011122 None:intergenic
CGAGTAAGCGTTTGTGCTTC+AGG 0.246753 3_4:-75015476 None:intergenic
TGGCACCAGGTCGCGACTTC+TGG 0.250399 3_4:+75012963 Msa0521940:CDS
CAAAGCTTCCATGTTGTTAC+AGG 0.257668 3_4:+75013926 Msa0521940:CDS
ATGATCAACAATATGAATTA+TGG 0.263716 3_4:-75013265 None:intergenic
ACCCAACTCAAAATAATCTT+TGG 0.271868 3_4:-75010871 None:intergenic
GCACTTTCCCCTTCGCGTTT+TGG 0.273753 3_4:+75015419 Msa0521940:CDS
CTAACCTTTAATCTTATCTA+TGG 0.279952 3_4:+75016419 Msa0521940:three_prime_UTR
GCTACATGGACCAGCTTTAA+TGG 0.282319 3_4:-75014371 None:intergenic
GGGGCCCGAGCAGGAGCTTT+TGG 0.283710 3_4:+75014400 Msa0521940:CDS
CTGCGAAGAGAAGTTGGTTT+TGG 0.293313 3_4:-75011033 None:intergenic
ACAGCTCTCTCATAAGTTAT+TGG 0.294717 3_4:-75016281 None:intergenic
AATACCATAGATAAGATTAA+AGG 0.305411 3_4:-75016423 None:intergenic
TGTCTAGTAGATTAAAAGAT+AGG 0.320395 3_4:+75016373 Msa0521940:exon
GCTGCGCTACACATCACTTT+TGG 0.327871 3_4:+75012988 Msa0521940:CDS
CTAAAATACTTACTTGTAAG+AGG 0.330219 3_4:-75014682 None:intergenic
TAACCTTCATCCCGGGCATT+TGG 0.334513 3_4:-75011994 None:intergenic
TCTGTTTCATGTTCATCAAT+TGG 0.338860 3_4:+75016345 Msa0521940:CDS
ACGAAAACCAGAAGGCAAAA+TGG 0.343351 3_4:-75015040 None:intergenic
AGCAATGAACAAATTGCTTA+TGG 0.345974 3_4:+75011298 Msa0521940:CDS
AACCTAAACAGATCAAAGTT+TGG 0.353061 3_4:+75011097 Msa0521940:CDS
CCAAGGGATGCAAGCCCTGC+TGG 0.354906 3_4:+75011734 Msa0521940:CDS
GCACTTGAGGTTGGAACCAC+TGG 0.370337 3_4:+75015233 Msa0521940:CDS
TTATGGATCATTATACTATA+CGG 0.371157 3_4:-75010725 None:intergenic
TAAAGTGGGCGCAAAACTTC+AGG 0.378668 3_4:-75013400 None:intergenic
AACCAAACTTTGATCTGTTT+AGG 0.378767 3_4:-75011099 None:intergenic
AATGTTATGTCCACAGGAAA+TGG 0.379586 3_4:+75012770 Msa0521940:CDS
TCAAGTGCTTCCACTTGCTC+TGG 0.381079 3_4:-75010991 None:intergenic
TTGAGAACATGGGCTACTAT+AGG 0.388073 3_4:+75014630 Msa0521940:CDS
AGGAAGTTAATTACCCTTGC+AGG 0.390715 3_4:-75012601 None:intergenic
AGGATGATGGCAGTGAGTTC+AGG 0.392334 3_4:+75010913 Msa0521940:exon
CCAGCAGGGCTTGCATCCCT+TGG 0.392669 3_4:-75011734 None:intergenic
CAGGCACGTGCAGCCACTCC+AGG 0.395142 3_4:-75012559 None:intergenic
CGACCTGGTGCCAGAGTTGT+TGG 0.396680 3_4:-75012953 None:intergenic
AAAGCTCCTGCTCGGGCCCC+TGG 0.404062 3_4:-75014397 None:intergenic
TGAGAACATGGGCTACTATA+GGG 0.407729 3_4:+75014631 Msa0521940:CDS
CTTGCTTCTGCACTTGAGGT+TGG 0.412761 3_4:+75015224 Msa0521940:CDS
GGGTGACAATTCAGGTCATT+CGG 0.414286 3_4:+75015268 Msa0521940:CDS
CAGGGTTTCATGTGTATTCA+AGG 0.417991 3_4:+75016230 Msa0521940:intron
GTTGAGTGGGTCCAAATGCC+CGG 0.418997 3_4:+75011983 Msa0521940:CDS
GAATATTGTGTGTGTGCAAT+AGG 0.419784 3_4:-75010810 None:intergenic
TCAGAGAAAGATGCATCAAT+TGG 0.421642 3_4:-75015009 None:intergenic
GCTGGTCCATGTAGCTTGCC+AGG 0.423708 3_4:+75014379 Msa0521940:CDS
CTTCCCCATCCTGTCACACT+TGG 0.428131 3_4:-75013602 None:intergenic
AGTTTGTCTGTGACAGTTGT+TGG 0.429122 3_4:-75010751 None:intergenic
TTTACGTTTGCGAATCAAGC+TGG 0.434930 3_4:+75015912 Msa0521940:CDS
GGTGACAATTCAGGTCATTC+GGG 0.437203 3_4:+75015269 Msa0521940:CDS
CGAAAACCAGAAGGCAAAAT+GGG 0.440093 3_4:-75015039 None:intergenic
GCACGTGCCTGCGGCCTCGT+GGG 0.440499 3_4:+75012571 Msa0521940:CDS
TTGGATTTGGAAGGTAGCTT+AGG 0.441794 3_4:+75010893 Msa0521940:five_prime_UTR
AATCGATACTTAAATCCCTT+TGG 0.442177 3_4:+75015668 Msa0521940:CDS
AGCTTGCCAGGGGCCCGAGC+AGG 0.444554 3_4:+75014391 Msa0521940:CDS
GTTTGTGCTTCAGGAGTTCC+AGG 0.444785 3_4:-75015467 None:intergenic
CGATCTTGCTTCTGCACTTG+AGG 0.446890 3_4:+75015220 Msa0521940:CDS
GGTGGATCTGTAACAGCTAT+AGG 0.449783 3_4:+75015498 Msa0521940:CDS
ACCACCAAAAGCTCCTGCTC+GGG 0.452836 3_4:-75014404 None:intergenic
CATTGAATTGCTTTACATGC+AGG 0.453193 3_4:+75012799 Msa0521940:CDS
ACCATGAGAGCCTATCTTTG+AGG 0.453750 3_4:-75012718 None:intergenic
CTGCGATATTATCTTGAAGA+TGG 0.455006 3_4:-75015340 None:intergenic
CTGTAACAACATGGAAGCTT+TGG 0.455633 3_4:-75013925 None:intergenic
CGGGCCCCTGGCAAGCTACA+TGG 0.457289 3_4:-75014385 None:intergenic
GAAGGTTACAAGCTGTGAAC+AGG 0.458532 3_4:+75011267 Msa0521940:CDS
GCAGGGCTTGCATCCCTTGG+TGG 0.461144 3_4:-75011731 None:intergenic
GACCACCAAAAGCTCCTGCT+CGG 0.462737 3_4:-75014405 None:intergenic
GCTTGCTCAGAGAACAACTA+TGG 0.463260 3_4:+75013438 Msa0521940:CDS
GGTTATCAAGCTTGAGAACA+TGG 0.465661 3_4:+75014619 Msa0521940:CDS
CTATACCTGCTGCATTATCT+GGG 0.466306 3_4:-75016033 None:intergenic
GCAATTTCTCATGGTTCCCC+TGG 0.467349 3_4:+75012541 Msa0521940:CDS
TTGCTGAAATCCTCAAAGAT+AGG 0.468317 3_4:+75012708 Msa0521940:CDS
GATTCAACGAAGCTGTCAAC+GGG 0.469615 3_4:+75013757 Msa0521940:CDS
TTCATCACCTAGCAAGATGA+TGG 0.470764 3_4:+75013845 Msa0521940:CDS
TGGAAGGTAGCTTAGGATGA+TGG 0.471273 3_4:+75010900 Msa0521940:exon
GATGGGCTTCAAATGCAAAC+TGG 0.472343 3_4:-75015322 None:intergenic
CATCTTCCTCAGCTTTGTAG+TGG 0.473433 3_4:+75014940 Msa0521940:intron
GAGTTTCTATCAAAGGCTAC+TGG 0.476434 3_4:+75011953 Msa0521940:CDS
TTCTCATGGTTCCCCTGGAG+TGG 0.477241 3_4:+75012546 Msa0521940:CDS
CTCAGCCAAGTGTGACAGGA+TGG 0.477876 3_4:+75013597 Msa0521940:CDS
TGCACGTGCCTGCGGCCTCG+TGG 0.486826 3_4:+75012570 Msa0521940:CDS
TGAGTTGGGTTGGATTTGGA+AGG 0.486924 3_4:+75010884 Msa0521940:five_prime_UTR
TAGCCTGGTCCGGATTCCAT+TGG 0.487508 3_4:+75012511 Msa0521940:intron
TGGTATTTGTTTATCCAGCA+TGG 0.488354 3_4:+75016253 Msa0521940:CDS
GTTTCTCAGCCAAGTGTGAC+AGG 0.488578 3_4:+75013593 Msa0521940:CDS
GGTTCAATATGAGAGAGAAT+AGG 0.490102 3_4:-75011078 None:intergenic
CAGCCAAGTGTGACAGGATG+GGG 0.491303 3_4:+75013599 Msa0521940:CDS
GCTCTAACAAAATGCGGCAC+TGG 0.492687 3_4:-75013192 None:intergenic
AGGAAGCTTAAAAGAGATGT+TGG 0.492851 3_4:-75010778 None:intergenic
GGTCCAAATGCCCGGGATGA+AGG 0.494227 3_4:+75011991 Msa0521940:CDS
GCGGGAACACAGATCAGAAT+GGG 0.495304 3_4:+75014315 Msa0521940:CDS
GGTATTTGTTTATCCAGCAT+GGG 0.496206 3_4:+75016254 Msa0521940:CDS
TTGTATTTGACTTACCCAGC+AGG 0.497760 3_4:-75011749 None:intergenic
TTTAGCAGAGTTTCTATCAA+AGG 0.497850 3_4:+75011946 Msa0521940:CDS
ATTCCAATGGAATCCGGACC+AGG 0.499148 3_4:-75012514 None:intergenic
CATTTAGAACATCCACAGTT+CGG 0.500936 3_4:-75012751 None:intergenic
TGCGGCACTGGAGGCATACT+AGG 0.502619 3_4:-75013180 None:intergenic
TGCGATATTATCTTGAAGAT+GGG 0.503723 3_4:-75015339 None:intergenic
AGTTATTGGCCTCCCCATGC+TGG 0.504544 3_4:-75016267 None:intergenic
TACTGGAACCGCTGTTGAGT+GGG 0.504776 3_4:+75011970 Msa0521940:CDS
GTTCTAAATGTTATGTCCAC+AGG 0.505259 3_4:+75012764 Msa0521940:CDS
GAGAAGCAGAGGAAAGAAGC+TGG 0.505430 3_4:+75011245 Msa0521940:CDS
AAGATGATGGGACTAAATCT+TGG 0.505856 3_4:+75013858 Msa0521940:CDS
GCAACGATTCCAATGGAATC+CGG 0.506436 3_4:-75012520 None:intergenic
CTAAGCGCACGTAGAGCTGC+AGG 0.508511 3_4:-75013629 None:intergenic
TTTGGCACATAGCACAGAAC+TGG 0.509436 3_4:-75013907 None:intergenic
CTAAATCTTGGTTATAACAA+TGG 0.512081 3_4:+75013870 Msa0521940:CDS
GTGGGCATATGCACCACCTA+TGG 0.512529 3_4:+75016485 Msa0521940:three_prime_UTR
TAGATTAAAAGATAGGATGT+AGG 0.513948 3_4:+75016380 Msa0521940:three_prime_UTR
GGAACCACTGGAAACAAAGC+AGG 0.514125 3_4:+75015245 Msa0521940:CDS
TCCTCAGCTTTGTAGTGGAG+TGG 0.515145 3_4:+75014945 Msa0521940:intron
CTGAAGCACAAACGCTTACT+CGG 0.516996 3_4:+75015477 Msa0521940:CDS
TCCTCAAAGATAGGCTCTCA+TGG 0.518370 3_4:+75012717 Msa0521940:CDS
TCGTGGGTCTTGAACCTGCA+AGG 0.518555 3_4:+75012587 Msa0521940:CDS
TCAGCAGCTGCCATTAAAGC+TGG 0.518942 3_4:+75014361 Msa0521940:CDS
GCAAGATCGAGTGTGCGGTT+AGG 0.519277 3_4:-75015206 None:intergenic
GGAATCGTTGCAATTTCTCA+TGG 0.524738 3_4:+75012532 Msa0521940:CDS
GTTTAAAGCTTGTTAAGAGA+GGG 0.525379 3_4:-75010849 None:intergenic
TTTAGTCCCATCATCTTGCT+AGG 0.525629 3_4:-75013852 None:intergenic
AACTCGTGTCCGTAGTGGCA+AGG 0.527560 3_4:-75011676 None:intergenic
TGTTGCCTGCGAAGAGAAGT+TGG 0.527712 3_4:-75011039 None:intergenic
CGCATCTGAGTGATGCCAAA+GGG 0.530194 3_4:-75015683 None:intergenic
GTTGTATGCGCCAACAACTC+TGG 0.530549 3_4:+75012943 Msa0521940:intron
TGCGGGAACACAGATCAGAA+TGG 0.530863 3_4:+75014314 Msa0521940:CDS
CAAAACCAACTTCTCTTCGC+AGG 0.532329 3_4:+75011034 Msa0521940:CDS
GAAAAGATATTTGATGACAA+TGG 0.533386 3_4:+75015984 Msa0521940:CDS
CTGGTCCATGTAGCTTGCCA+GGG 0.538428 3_4:+75014380 Msa0521940:CDS
CTGCATGTAAAGCAATTCAA+TGG 0.540926 3_4:-75012798 None:intergenic
AGCAACCAGAAGTCGCGACC+TGG 0.542154 3_4:-75012968 None:intergenic
TCAGCCAAGTGTGACAGGAT+GGG 0.542398 3_4:+75013598 Msa0521940:CDS
TCAAGATAATATCGCAGCTA+TGG 0.544488 3_4:+75015346 Msa0521940:CDS
CAAGGGATGCAAGCCCTGCT+GGG 0.545537 3_4:+75011735 Msa0521940:CDS
TGATGTCTTGAAGTGCAACC+AGG 0.546715 3_4:-75015956 None:intergenic
TCACTTAACAACACACAGAA+TGG 0.547612 3_4:+75013156 Msa0521940:CDS
CTGATTAGACCCTGTGAAGG+AGG 0.548637 3_4:+75013237 Msa0521940:CDS
GTCAACGGGTTTACAGATGA+TGG 0.550490 3_4:+75013771 Msa0521940:CDS
TGATTAGACCCTGTGAAGGA+GGG 0.553128 3_4:+75013238 Msa0521940:CDS
TTCAAGACCCACGAGGCCGC+AGG 0.553773 3_4:-75012578 None:intergenic
ACAGACGACCCTTGCCACTA+CGG 0.558722 3_4:+75011667 Msa0521940:intron
TATAACTATTATATTGCTGT+GGG 0.561696 3_4:+75016467 Msa0521940:three_prime_UTR
TGCTAAAGTCTCCTCTGCAA+TGG 0.562754 3_4:-75011930 None:intergenic
CTATAACTATTATATTGCTG+TGG 0.564272 3_4:+75016466 Msa0521940:three_prime_UTR
GTATTTGTTTATCCAGCATG+GGG 0.564375 3_4:+75016255 Msa0521940:CDS
GTCCTTGTAGAATGTCCCTC+CGG 0.565212 3_4:+75014273 Msa0521940:intron
AGCATGGATGACTCATAAAG+TGG 0.566145 3_4:-75013415 None:intergenic
AGGGATGATATGACAATGCC+TGG 0.566322 3_4:+75014650 Msa0521940:CDS
TTTGGAGGATGGCAGTCTTG+TGG 0.566818 3_4:+75013006 Msa0521940:CDS
AGGGTAATTAACCTTCATCC+CGG 0.569520 3_4:-75012002 None:intergenic
AAGTTTGGTTCCAGAACAGA+AGG 0.569991 3_4:+75011112 Msa0521940:CDS
TCTGAGAACCAAAACGCGAA+GGG 0.570540 3_4:-75015427 None:intergenic
TGTGCAATAGGAAGGAAGGA+AGG 0.570640 3_4:-75010798 None:intergenic
AATGGTTCCTCCATTTCCTG+TGG 0.571463 3_4:-75012780 None:intergenic
TGTATTTGACTTACCCAGCA+GGG 0.572571 3_4:-75011748 None:intergenic
GATTAGACCCTGTGAAGGAG+GGG 0.573104 3_4:+75013239 Msa0521940:CDS
AGCACAGAACTGGTGACAGA+TGG 0.574046 3_4:-75013897 None:intergenic
AGAAATTGCAACGATTCCAA+TGG 0.574191 3_4:-75012527 None:intergenic
ACTCGTGTCCGTAGTGGCAA+GGG 0.576336 3_4:-75011675 None:intergenic
GCAGGTGCAGAGAGAAGCAG+AGG 0.578902 3_4:+75011234 Msa0521940:intron
AAAACTTCAGGCACACTCCA+AGG 0.579548 3_4:-75013388 None:intergenic
GGTTTAAAGCTTGTTAAGAG+AGG 0.581152 3_4:-75010850 None:intergenic
TGTGTGTGCAATAGGAAGGA+AGG 0.582207 3_4:-75010802 None:intergenic
GCAGAACTACTTAAGTGTGA+AGG 0.583973 3_4:+75015640 Msa0521940:CDS
AGGCACGTGCAGCCACTCCA+GGG 0.585841 3_4:-75012558 None:intergenic
CTACTGGAACCGCTGTTGAG+TGG 0.586215 3_4:+75011969 Msa0521940:CDS
TTCTGAGAACCAAAACGCGA+AGG 0.588476 3_4:-75015428 None:intergenic
AATGAACAAATTGCTTATGG+AGG 0.590460 3_4:+75011301 Msa0521940:CDS
AAGGTACACACCAGAGCAAG+TGG 0.590467 3_4:+75010981 Msa0521940:CDS
CTAACAAAATGCGGCACTGG+AGG 0.590611 3_4:-75013189 None:intergenic
ATTGTGTGTGTGCAATAGGA+AGG 0.591816 3_4:-75010806 None:intergenic
TGGTCTATGTTAGATAGTGA+TGG 0.594042 3_4:+75013795 Msa0521940:CDS
GTGTGACAGGATGGGGAAGG+CGG 0.594930 3_4:+75013606 Msa0521940:CDS
TGGACAATGGAAAGTACGTA+AGG 0.595746 3_4:+75010962 Msa0521940:CDS
TGGTCCATGTAGCTTGCCAG+GGG 0.596219 3_4:+75014381 Msa0521940:CDS
CTTATGAGAGAGCTGTAGCA+TGG 0.596800 3_4:+75016288 Msa0521940:CDS
AGATAGTAGCAAGATAGCAA+TGG 0.599640 3_4:+75010942 Msa0521940:CDS
GCGCCAACAACTCTGGCACC+AGG 0.600039 3_4:+75012950 Msa0521940:CDS
CGTGGGTCTTGAACCTGCAA+GGG 0.600458 3_4:+75012588 Msa0521940:CDS
TTGAGTGGGTCCAAATGCCC+GGG 0.600560 3_4:+75011984 Msa0521940:CDS
GGATTCAACGAAGCTGTCAA+CGG 0.601339 3_4:+75013756 Msa0521940:CDS
AGCAAGATAGCAATGGACAA+TGG 0.602515 3_4:+75010949 Msa0521940:CDS
GGGTAATTAACCTTCATCCC+GGG 0.604192 3_4:-75012001 None:intergenic
CAGAACTACTTAAGTGTGAA+GGG 0.605820 3_4:+75015641 Msa0521940:CDS
TCATCACCTAGCAAGATGAT+GGG 0.607665 3_4:+75013846 Msa0521940:CDS
TTTGTTTATCCAGCATGGGG+AGG 0.608499 3_4:+75016258 Msa0521940:CDS
GTTATGTCCACAGGAAATGG+AGG 0.608625 3_4:+75012773 Msa0521940:CDS
GCATGGATGACTCATAAAGT+GGG 0.609344 3_4:-75013414 None:intergenic
AGCAGAGGAAAGAAGCTGGA+AGG 0.615005 3_4:+75011249 Msa0521940:CDS
GGAGTGGCTGCACGTGCCTG+CGG 0.616801 3_4:+75012562 Msa0521940:CDS
ATTAGACCCTGTGAAGGAGG+GGG 0.617333 3_4:+75013240 Msa0521940:CDS
GGAGTGGACGAGCATGCAGT+TGG 0.618690 3_4:+75014961 Msa0521940:CDS
AGGTGATGAATTCACAAGAA+GGG 0.622669 3_4:-75013832 None:intergenic
CATACCTCTTGAATCTAGCA+CGG 0.625244 3_4:+75015065 Msa0521940:CDS
CTCACAACTCGTGTCCGTAG+TGG 0.627252 3_4:-75011681 None:intergenic
CGGTCAGCAGCATCCACCAA+GGG 0.631326 3_4:+75011718 Msa0521940:CDS
TAGGTGATGAATTCACAAGA+AGG 0.633200 3_4:-75013833 None:intergenic
GGCACGTGCAGCCACTCCAG+GGG 0.635325 3_4:-75012557 None:intergenic
ATCTAAGAAGAATAGCCGGA+GGG 0.640469 3_4:-75014288 None:intergenic
CCGCATCTGAGTGATGCCAA+AGG 0.646305 3_4:-75015684 None:intergenic
ACGGGTTTACAGATGATGGA+TGG 0.646531 3_4:+75013775 Msa0521940:CDS
CTGAGAACCAAAACGCGAAG+GGG 0.646857 3_4:-75015426 None:intergenic
TGTTCTCTGAGCAAGCAGCA+TGG 0.647938 3_4:-75013431 None:intergenic
ATACCTGCTGCATTATCTGG+GGG 0.648878 3_4:-75016031 None:intergenic
AAAAGAAATGAGTCCATAGG+TGG 0.649262 3_4:-75016498 None:intergenic
GTTATCAAGCTTGAGAACAT+GGG 0.649916 3_4:+75014620 Msa0521940:CDS
TATACCTGCTGCATTATCTG+GGG 0.653102 3_4:-75016032 None:intergenic
CAAGTGTGACAGGATGGGGA+AGG 0.654511 3_4:+75013603 Msa0521940:CDS
TGTAAGAGGAAAATATCACC+AGG 0.656562 3_4:-75014668 None:intergenic
CTTGCCGTGCTAGATTCAAG+AGG 0.658066 3_4:-75015069 None:intergenic
ACTTCAGCTCTAACAAAATG+CGG 0.660310 3_4:-75013198 None:intergenic
GGACACGAGTTGTGAGTCAG+TGG 0.661062 3_4:+75011688 Msa0521940:CDS
GATGTCTTGAAGTGCAACCA+GGG 0.661753 3_4:-75015955 None:intergenic
GAACCACTGGAAACAAAGCA+GGG 0.663545 3_4:+75015246 Msa0521940:CDS
GCGGTCAGCAGCATCCACCA+AGG 0.664352 3_4:+75011717 Msa0521940:CDS
GGTATGATACGAAAACCAGA+AGG 0.665928 3_4:-75015048 None:intergenic
GGTCTAATCAGATAACCGCT+AGG 0.667041 3_4:-75013225 None:intergenic
AATCTAAGAAGAATAGCCGG+AGG 0.667152 3_4:-75014289 None:intergenic
CCTTTGGCATCACTCAGATG+CGG 0.670379 3_4:+75015684 Msa0521940:CDS
TTCTGTAATACAGTTCATGG+AGG 0.670808 3_4:+75014598 Msa0521940:intron
TATCTGATTAGACCCTGTGA+AGG 0.676545 3_4:+75013234 Msa0521940:CDS
GAATTATACCTGTAACAACA+TGG 0.676552 3_4:-75013934 None:intergenic
TGTGAGTCAGTGGTAACAAG+CGG 0.679277 3_4:+75011698 Msa0521940:CDS
AAGCACAAACGCTTACTCGG+TGG 0.679968 3_4:+75015480 Msa0521940:CDS
CAGAAGCAAGATCGAGTGTG+CGG 0.682497 3_4:-75015211 None:intergenic
GTATCGTGATTGCCGAACTG+TGG 0.685847 3_4:+75012739 Msa0521940:CDS
AAAATGTGTTCTCATACACA+AGG 0.695835 3_4:-75011355 None:intergenic
ACCACTGGAAACAAAGCAGG+GGG 0.697026 3_4:+75015248 Msa0521940:CDS
TGTGCTTCAGGAGTTCCAGG+TGG 0.700188 3_4:-75015464 None:intergenic
CATTTGGACCCACTCAACAG+CGG 0.704277 3_4:-75011978 None:intergenic
TGACATGCTTGAAACCACCC+TGG 0.704585 3_4:+75015938 Msa0521940:CDS
GGTTTCATGTGTATTCAAGG+TGG 0.704702 3_4:+75016233 Msa0521940:CDS
AACCACTGGAAACAAAGCAG+GGG 0.710996 3_4:+75015247 Msa0521940:CDS
AGAGCTGAAGTGTTGCCTAG+CGG 0.716290 3_4:+75013210 Msa0521940:CDS
GTCTTGAAGTGCAACCAGGG+TGG 0.726402 3_4:-75015952 None:intergenic
TTGCAGGTTCAAGACCCACG+AGG 0.774422 3_4:-75012585 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGTATATTTATAATTTATT+TGG + chr3_4:75011132-75011151 Msa0521940:intron 10.0%
!! TTAGTATTAGTATTAATTAA+AGG + chr3_4:75012180-75012199 Msa0521940:intron 10.0%
!! TTAATAAATTAATAATGAAG+AGG - chr3_4:75012628-75012647 None:intergenic 10.0%
!!! TTTTAACAATATCAATATTT+AGG + chr3_4:75013122-75013141 Msa0521940:intron 10.0%
!!! TATTTTATAGAATAAGTAAA+AGG - chr3_4:75013316-75013335 None:intergenic 10.0%
!! CTAAAACATTATATTATATA+AGG - chr3_4:75015830-75015849 None:intergenic 10.0%
!! AATTTATTTGGCAAATTAAA+AGG + chr3_4:75011144-75011163 Msa0521940:intron 15.0%
!! ATTTATTTGGCAAATTAAAA+GGG + chr3_4:75011145-75011164 Msa0521940:intron 15.0%
!! TTAATGAATTAATGAAAGTT+TGG + chr3_4:75011194-75011213 Msa0521940:intron 15.0%
!! TTTATCATAAAAGAAATGTT+AGG + chr3_4:75011498-75011517 Msa0521940:intron 15.0%
!!! ATCCTTAAAATAATGATTTT+AGG - chr3_4:75011555-75011574 None:intergenic 15.0%
!!! TAGTAATGGAATATTATTTA+TGG + chr3_4:75011870-75011889 Msa0521940:intron 15.0%
!! AAAAAAAGTAAAAGAAAGTA+GGG - chr3_4:75012024-75012043 None:intergenic 15.0%
!! TAAAAAAAGTAAAAGAAAGT+AGG - chr3_4:75012025-75012044 None:intergenic 15.0%
!! AATAAAGGAATAAATTAAGA+AGG - chr3_4:75012060-75012079 None:intergenic 15.0%
!!! TTACTTTCTTTTTATTTTAC+AGG + chr3_4:75013733-75013752 Msa0521940:intron 15.0%
!!! TACTTTCTTTTTATTTTACA+GGG + chr3_4:75013734-75013753 Msa0521940:intron 15.0%
!! ATATAATATATAGTACTCAA+GGG - chr3_4:75014035-75014054 None:intergenic 15.0%
!! AATATAATATATAGTACTCA+AGG - chr3_4:75014036-75014055 None:intergenic 15.0%
!!! TAACGATATATGAAATATTT+TGG + chr3_4:75016205-75016224 Msa0521940:intron 15.0%
!! TTATGGATCATTATACTATA+CGG - chr3_4:75010728-75010747 None:intergenic 20.0%
!!! TAATTACATTTTGTGTATGT+TGG - chr3_4:75011385-75011404 None:intergenic 20.0%
!!! TGCCTAAAATCATTATTTTA+AGG + chr3_4:75011550-75011569 Msa0521940:intron 20.0%
!! AATTAAGAAGGTGAAATAAA+AGG - chr3_4:75012048-75012067 None:intergenic 20.0%
!! TCATAATGTAATGCAAATAA+AGG - chr3_4:75012075-75012094 None:intergenic 20.0%
!!! TAAAAAAAAAAGAGTTGGTT+TGG - chr3_4:75012099-75012118 None:intergenic 20.0%
!! AAAAATAGTGAATGTTGTTA+AGG - chr3_4:75012137-75012156 None:intergenic 20.0%
!!! TATTTTTAACTGCATTTGTA+TGG + chr3_4:75012150-75012169 Msa0521940:intron 20.0%
!! ATAAAGGTAAAAAATCAATC+AGG - chr3_4:75012315-75012334 None:intergenic 20.0%
!! AAGAAAAATTACATCACATA+AGG - chr3_4:75012346-75012365 None:intergenic 20.0%
!!! AAAAGAAAATATAAGAGTGT+TGG - chr3_4:75012429-75012448 None:intergenic 20.0%
!! AACATTTACATCACATAATT+AGG - chr3_4:75012452-75012471 None:intergenic 20.0%
!! TAAATTAATAATGAAGAGGA+AGG - chr3_4:75012624-75012643 None:intergenic 20.0%
!! ATGATCAACAATATGAATTA+TGG - chr3_4:75013268-75013287 None:intergenic 20.0%
!! AACTGAAAGTTAAGTAAATA+TGG - chr3_4:75013341-75013360 None:intergenic 20.0%
!! TTTACCTTCAAATCTATATA+TGG - chr3_4:75013489-75013508 None:intergenic 20.0%
!!! ACTTTCTTTTTATTTTACAG+GGG + chr3_4:75013735-75013754 Msa0521940:intron 20.0%
!!! TTATTTTACTGATGTCAAAA+TGG - chr3_4:75014168-75014187 None:intergenic 20.0%
!! AAATACATGTAGTAAATGTT+TGG - chr3_4:75014223-75014242 None:intergenic 20.0%
!! TCAATTATTGCAATTATAGA+AGG - chr3_4:75014782-75014801 None:intergenic 20.0%
!!! TTTTCTGATAAGAATTTGAT+TGG + chr3_4:75015747-75015766 Msa0521940:intron 20.0%
!!! AATTTAAATATGATTTTGGC+AGG + chr3_4:75015878-75015897 Msa0521940:intron 20.0%
!! AATACCATAGATAAGATTAA+AGG - chr3_4:75016426-75016445 None:intergenic 20.0%
!! TTAATCTTATCTATGGTATT+TGG + chr3_4:75016426-75016445 Msa0521940:three_prime_UTR 20.0%
!! TATAACTATTATATTGCTGT+GGG + chr3_4:75016467-75016486 Msa0521940:three_prime_UTR 20.0%
!!! AACCAAAGATTATTTTGAGT+TGG + chr3_4:75010869-75010888 Msa0521940:five_prime_UTR 25.0%
!!! ACCAAAGATTATTTTGAGTT+GGG + chr3_4:75010870-75010889 Msa0521940:five_prime_UTR 25.0%
! TATAAATATACCTTCTGTTC+TGG - chr3_4:75011125-75011144 None:intergenic 25.0%
!!! GTGTTGTTTATTAATTTTGC+AGG + chr3_4:75011216-75011235 Msa0521940:intron 25.0%
! ATAGTACGAGTAAAATACAA+GGG - chr3_4:75011776-75011795 None:intergenic 25.0%
! AATAGTACGAGTAAAATACA+AGG - chr3_4:75011777-75011796 None:intergenic 25.0%
! AGCAGTAAAAAAAAAAGAGT+TGG - chr3_4:75012104-75012123 None:intergenic 25.0%
!! AATTGAAGATTCGTTCATTT+TGG + chr3_4:75012239-75012258 Msa0521940:intron 25.0%
!! ATTGAAGATTCGTTCATTTT+GGG + chr3_4:75012240-75012259 Msa0521940:intron 25.0%
!!! AATTTTTTCGTCAACTAAGT+CGG + chr3_4:75012266-75012285 Msa0521940:intron 25.0%
! ATTACATCACATAAGGAAAA+GGG - chr3_4:75012339-75012358 None:intergenic 25.0%
! AATTACATCACATAAGGAAA+AGG - chr3_4:75012340-75012359 None:intergenic 25.0%
! TTCACTCAATGCATATTAAT+GGG - chr3_4:75012661-75012680 None:intergenic 25.0%
! TCTTAGTCACAATAATAACT+TGG + chr3_4:75012859-75012878 Msa0521940:intron 25.0%
! TTCAAATCTATATATGGCAA+TGG - chr3_4:75013483-75013502 None:intergenic 25.0%
! ATTGCCATATATAGATTTGA+AGG + chr3_4:75013482-75013501 Msa0521940:intron 25.0%
! CTAAATCTTGGTTATAACAA+TGG + chr3_4:75013870-75013889 Msa0521940:CDS 25.0%
!! TTAAGTTTTACTAGTGTGTT+TGG + chr3_4:75014054-75014073 Msa0521940:intron 25.0%
! TTGGAATAGTACTAAGTTAT+TGG + chr3_4:75014073-75014092 Msa0521940:intron 25.0%
! TTGACATCAGTAAAATAACT+TGG + chr3_4:75014170-75014189 Msa0521940:intron 25.0%
! AAAAATCTAAGAAGAATAGC+CGG - chr3_4:75014295-75014314 None:intergenic 25.0%
!! CTATTCTTCTTAGATTTTTG+CGG + chr3_4:75014296-75014315 Msa0521940:CDS 25.0%
!! TATTCTTCTTAGATTTTTGC+GGG + chr3_4:75014297-75014316 Msa0521940:CDS 25.0%
! ATGTAAGAGATAACAAAATC+AGG - chr3_4:75014486-75014505 None:intergenic 25.0%
! CTAAAATACTTACTTGTAAG+AGG - chr3_4:75014685-75014704 None:intergenic 25.0%
! AATAGATATGTTCAAGAGAA+TGG - chr3_4:75014712-75014731 None:intergenic 25.0%
! ATGATGATCTTAATCATGTT+CGG + chr3_4:75015580-75015599 Msa0521940:intron 25.0%
!! GTCATCAAATATCTTTTCTA+GGG - chr3_4:75015982-75016001 None:intergenic 25.0%
!! TGTCATCAAATATCTTTTCT+AGG - chr3_4:75015983-75016002 None:intergenic 25.0%
!! GAAAAGATATTTGATGACAA+TGG + chr3_4:75015984-75016003 Msa0521940:CDS 25.0%
!! AAAGAGTATGTTGATGTTAA+CGG + chr3_4:75016074-75016093 Msa0521940:intron 25.0%
!!! TATATGAAATATTTTGGTGC+AGG + chr3_4:75016211-75016230 Msa0521940:intron 25.0%
!!! ATATGAAATATTTTGGTGCA+GGG + chr3_4:75016212-75016231 Msa0521940:intron 25.0%
! TGTCTAGTAGATTAAAAGAT+AGG + chr3_4:75016373-75016392 Msa0521940:exon 25.0%
! TAGATTAAAAGATAGGATGT+AGG + chr3_4:75016380-75016399 Msa0521940:three_prime_UTR 25.0%
! CTAACCTTTAATCTTATCTA+TGG + chr3_4:75016419-75016438 Msa0521940:three_prime_UTR 25.0%
! CTATAACTATTATATTGCTG+TGG + chr3_4:75016466-75016485 Msa0521940:three_prime_UTR 25.0%
!! GTTTAAAGCTTGTTAAGAGA+GGG - chr3_4:75010852-75010871 None:intergenic 30.0%
ACCCAACTCAAAATAATCTT+TGG - chr3_4:75010874-75010893 None:intergenic 30.0%
!!! AAGATTATTTTGAGTTGGGT+TGG + chr3_4:75010874-75010893 Msa0521940:five_prime_UTR 30.0%
AACCTAAACAGATCAAAGTT+TGG + chr3_4:75011097-75011116 Msa0521940:CDS 30.0%
AACCAAACTTTGATCTGTTT+AGG - chr3_4:75011102-75011121 None:intergenic 30.0%
AGCAATGAACAAATTGCTTA+TGG + chr3_4:75011298-75011317 Msa0521940:CDS 30.0%
AATGAACAAATTGCTTATGG+AGG + chr3_4:75011301-75011320 Msa0521940:CDS 30.0%
AAAATGTGTTCTCATACACA+AGG - chr3_4:75011358-75011377 None:intergenic 30.0%
! TTACATTTTGTGTATGTTGG+CGG - chr3_4:75011382-75011401 None:intergenic 30.0%
!! TAAATTTTGCCATTTGAGTC+TGG + chr3_4:75011521-75011540 Msa0521940:intron 30.0%
TTTAGCAGAGTTTCTATCAA+AGG + chr3_4:75011946-75011965 Msa0521940:CDS 30.0%
TGAATGTTGTTAAGGTTTGT+TGG - chr3_4:75012129-75012148 None:intergenic 30.0%
! ACATAAGGAAAAGGGTATAA+AGG - chr3_4:75012331-75012350 None:intergenic 30.0%
GTTCACTCAATGCATATTAA+TGG - chr3_4:75012662-75012681 None:intergenic 30.0%
AAATTTGTGATGTCCTTTAC+AGG + chr3_4:75012685-75012704 Msa0521940:intron 30.0%
CATGTTAGATTTCGTTAATG+TGG - chr3_4:75012907-75012926 None:intergenic 30.0%
TACATGTTTATGCACCTATA+TGG + chr3_4:75013044-75013063 Msa0521940:intron 30.0%
TGTTAAACATGCAACCATAT+AGG - chr3_4:75013061-75013080 None:intergenic 30.0%
!! AATATCAGAGTTTGAGTTGA+AGG - chr3_4:75013093-75013112 None:intergenic 30.0%
! TGTTGATCATATGCTTTTAG+AGG + chr3_4:75013278-75013297 Msa0521940:CDS 30.0%
AGATTTGAAGGTAAACATGT+TGG + chr3_4:75013494-75013513 Msa0521940:intron 30.0%
TTTAGGCTTTACGTCATTTA+AGG + chr3_4:75013555-75013574 Msa0521940:intron 30.0%
AATGCAATTGTGAAGGAAAA+TGG - chr3_4:75013677-75013696 None:intergenic 30.0%
TTGTAACAATGCAATTGTGA+AGG - chr3_4:75013684-75013703 None:intergenic 30.0%
GAATTATACCTGTAACAACA+TGG - chr3_4:75013937-75013956 None:intergenic 30.0%
TTCTTAGTACTCACTACTTA+TGG + chr3_4:75013964-75013983 Msa0521940:intron 30.0%
ATATATAGTACTCAAGGGAA+AGG - chr3_4:75014030-75014049 None:intergenic 30.0%
TACTAAGTTATTGGTGTGTT+TGG + chr3_4:75014082-75014101 Msa0521940:intron 30.0%
! ACAAAATAATAGCTTGTGGT+TGG - chr3_4:75014138-75014157 None:intergenic 30.0%
AGCTACAAAATAATAGCTTG+TGG - chr3_4:75014142-75014161 None:intergenic 30.0%
! TCAAACATGTTTTTCGTCTT+TGG + chr3_4:75014550-75014569 Msa0521940:intron 30.0%
! GTTTTCTGTAATACAGTTCA+TGG + chr3_4:75014595-75014614 Msa0521940:intron 30.0%
TTGAGAGAAAACACTTCTAT+TGG + chr3_4:75014798-75014817 Msa0521940:intron 30.0%
CTGATTATAGAAGATGCTTT+CGG + chr3_4:75014883-75014902 Msa0521940:intron 30.0%
TGCGATATTATCTTGAAGAT+GGG - chr3_4:75015342-75015361 None:intergenic 30.0%
TGATGATCTTAATCATGTTC+GGG + chr3_4:75015581-75015600 Msa0521940:intron 30.0%
!!! TTTTTTCGCAGATTCAATCT+AGG + chr3_4:75015616-75015635 Msa0521940:intron 30.0%
! TTGATTCGCAAACGTAAAAA+CGG - chr3_4:75015910-75015929 None:intergenic 30.0%
! AAGAGTATGTTGATGTTAAC+GGG + chr3_4:75016075-75016094 Msa0521940:intron 30.0%
TCTGTTTCATGTTCATCAAT+TGG + chr3_4:75016345-75016364 Msa0521940:CDS 30.0%
CTAAAAAGAAATGAGTCCAT+AGG - chr3_4:75016504-75016523 None:intergenic 30.0%
AGGAAGCTTAAAAGAGATGT+TGG - chr3_4:75010781-75010800 None:intergenic 35.0%
GAATATTGTGTGTGTGCAAT+AGG - chr3_4:75010813-75010832 None:intergenic 35.0%
!! GGTTTAAAGCTTGTTAAGAG+AGG - chr3_4:75010853-75010872 None:intergenic 35.0%
!!! ATTTTGAGTTGGGTTGGATT+TGG + chr3_4:75010880-75010899 Msa0521940:five_prime_UTR 35.0%
AGATAGTAGCAAGATAGCAA+TGG + chr3_4:75010942-75010961 Msa0521940:CDS 35.0%
!!! AAGTTGGTTTTGGACATTCA+TGG - chr3_4:75011026-75011045 None:intergenic 35.0%
GGTTCAATATGAGAGAGAAT+AGG - chr3_4:75011081-75011100 None:intergenic 35.0%
TATCATCCAATGTATGTCGT+TGG + chr3_4:75011846-75011865 Msa0521940:intron 35.0%
TACTATCCAACGACATACAT+TGG - chr3_4:75011855-75011874 None:intergenic 35.0%
TGTATGTCGTTGGATAGTAA+TGG + chr3_4:75011856-75011875 Msa0521940:intron 35.0%
! ATACTCAAGACTTTTGACCA+AGG + chr3_4:75012393-75012412 Msa0521940:intron 35.0%
AGAAATTGCAACGATTCCAA+TGG - chr3_4:75012530-75012549 None:intergenic 35.0%
TTGCTGAAATCCTCAAAGAT+AGG + chr3_4:75012708-75012727 Msa0521940:CDS 35.0%
! CATTTAGAACATCCACAGTT+CGG - chr3_4:75012754-75012773 None:intergenic 35.0%
! GTTCTAAATGTTATGTCCAC+AGG + chr3_4:75012764-75012783 Msa0521940:CDS 35.0%
AATGTTATGTCCACAGGAAA+TGG + chr3_4:75012770-75012789 Msa0521940:CDS 35.0%
CTGCATGTAAAGCAATTCAA+TGG - chr3_4:75012801-75012820 None:intergenic 35.0%
CATTGAATTGCTTTACATGC+AGG + chr3_4:75012799-75012818 Msa0521940:CDS 35.0%
!! GAGTTTGAGTTGAAGGATAT+AGG - chr3_4:75013086-75013105 None:intergenic 35.0%
TCACTTAACAACACACAGAA+TGG + chr3_4:75013156-75013175 Msa0521940:CDS 35.0%
! ACTTCAGCTCTAACAAAATG+CGG - chr3_4:75013201-75013220 None:intergenic 35.0%
!! TGATTCTTTGAAATCAGCCT+TGG + chr3_4:75013371-75013390 Msa0521940:intron 35.0%
!! TAACCCTGCAATTGTTGTTT+AGG + chr3_4:75013538-75013557 Msa0521940:intron 35.0%
AAGCCTAAACAACAATTGCA+GGG - chr3_4:75013544-75013563 None:intergenic 35.0%
AAAGCCTAAACAACAATTGC+AGG - chr3_4:75013545-75013564 None:intergenic 35.0%
TGGTCTATGTTAGATAGTGA+TGG + chr3_4:75013795-75013814 Msa0521940:CDS 35.0%
AGGTGATGAATTCACAAGAA+GGG - chr3_4:75013835-75013854 None:intergenic 35.0%
TAGGTGATGAATTCACAAGA+AGG - chr3_4:75013836-75013855 None:intergenic 35.0%
!! AAGATGATGGGACTAAATCT+TGG + chr3_4:75013858-75013877 Msa0521940:CDS 35.0%
ACCAAATGACTTCTGATACT+CGG + chr3_4:75014112-75014131 Msa0521940:intron 35.0%
ACTGTATTACAGAAAACCAC+TGG - chr3_4:75014592-75014611 None:intergenic 35.0%
TTCTGTAATACAGTTCATGG+AGG + chr3_4:75014598-75014617 Msa0521940:intron 35.0%
GTTATCAAGCTTGAGAACAT+GGG + chr3_4:75014620-75014639 Msa0521940:CDS 35.0%
TGTAAGAGGAAAATATCACC+AGG - chr3_4:75014671-75014690 None:intergenic 35.0%
AATAGTTAGCTATGCACATG+AGG - chr3_4:75014910-75014929 None:intergenic 35.0%
TCAGAGAAAGATGCATCAAT+TGG - chr3_4:75015012-75015031 None:intergenic 35.0%
CTGCGATATTATCTTGAAGA+TGG - chr3_4:75015343-75015362 None:intergenic 35.0%
TCAAGATAATATCGCAGCTA+TGG + chr3_4:75015346-75015365 Msa0521940:CDS 35.0%
TGCTGTTATGCATAGTGAAA+TGG - chr3_4:75015544-75015563 None:intergenic 35.0%
CAGAACTACTTAAGTGTGAA+GGG + chr3_4:75015641-75015660 Msa0521940:CDS 35.0%
! AGTCACAACGTTTGATTTAG+CGG - chr3_4:75015802-75015821 None:intergenic 35.0%
TGATTCGCAAACGTAAAAAC+GGG - chr3_4:75015909-75015928 None:intergenic 35.0%
! ATGTTGATGTTAACGGGTAT+TGG + chr3_4:75016081-75016100 Msa0521940:intron 35.0%
! TGTTGATGTTAACGGGTATT+GGG + chr3_4:75016082-75016101 Msa0521940:intron 35.0%
AAAATGTATGCGACGAAGTT+TGG + chr3_4:75016131-75016150 Msa0521940:intron 35.0%
TGGTATTTGTTTATCCAGCA+TGG + chr3_4:75016253-75016272 Msa0521940:CDS 35.0%
GGTATTTGTTTATCCAGCAT+GGG + chr3_4:75016254-75016273 Msa0521940:CDS 35.0%
GTATTTGTTTATCCAGCATG+GGG + chr3_4:75016255-75016274 Msa0521940:CDS 35.0%
ACAGCTCTCTCATAAGTTAT+TGG - chr3_4:75016284-75016303 None:intergenic 35.0%
AAAAGAAATGAGTCCATAGG+TGG - chr3_4:75016501-75016520 None:intergenic 35.0%
! GTGACAGTTGTTGGTTGTTA+TGG - chr3_4:75010745-75010764 None:intergenic 40.0%
AGTTTGTCTGTGACAGTTGT+TGG - chr3_4:75010754-75010773 None:intergenic 40.0%
ATTGTGTGTGTGCAATAGGA+AGG - chr3_4:75010809-75010828 None:intergenic 40.0%
TTGGATTTGGAAGGTAGCTT+AGG + chr3_4:75010893-75010912 Msa0521940:five_prime_UTR 40.0%
AGCAAGATAGCAATGGACAA+TGG + chr3_4:75010949-75010968 Msa0521940:CDS 40.0%
! TGGACAATGGAAAGTACGTA+AGG + chr3_4:75010962-75010981 Msa0521940:CDS 40.0%
! AAGTTTGGTTCCAGAACAGA+AGG + chr3_4:75011112-75011131 Msa0521940:CDS 40.0%
! ACTTTGATGATCTCAGCTCA+AGG - chr3_4:75011468-75011487 None:intergenic 40.0%
GAGCTGAGATCATCAAAGTT+AGG + chr3_4:75011469-75011488 Msa0521940:intron 40.0%
! TGTATTTGACTTACCCAGCA+GGG - chr3_4:75011751-75011770 None:intergenic 40.0%
! TTGTATTTGACTTACCCAGC+AGG - chr3_4:75011752-75011771 None:intergenic 40.0%
GAGTTTCTATCAAAGGCTAC+TGG + chr3_4:75011953-75011972 Msa0521940:CDS 40.0%
AGGGTAATTAACCTTCATCC+CGG - chr3_4:75012005-75012024 None:intergenic 40.0%
!! GTGTTGGTTTATGTAGTCCT+TGG - chr3_4:75012413-75012432 None:intergenic 40.0%
! GTGATGAATGTTTTGTAGCC+TGG + chr3_4:75012496-75012515 Msa0521940:intron 40.0%
GGAATCGTTGCAATTTCTCA+TGG + chr3_4:75012532-75012551 Msa0521940:CDS 40.0%
AGGAAGTTAATTACCCTTGC+AGG - chr3_4:75012604-75012623 None:intergenic 40.0%
AGGATTTCAGCAACCTGTAA+AGG - chr3_4:75012701-75012720 None:intergenic 40.0%
!! TACACATCACTTTTGGAGGA+TGG + chr3_4:75012995-75013014 Msa0521940:CDS 40.0%
TATCTGATTAGACCCTGTGA+AGG + chr3_4:75013234-75013253 Msa0521940:CDS 40.0%
GCATGGATGACTCATAAAGT+GGG - chr3_4:75013417-75013436 None:intergenic 40.0%
AGCATGGATGACTCATAAAG+TGG - chr3_4:75013418-75013437 None:intergenic 40.0%
TTCATCACCTAGCAAGATGA+TGG + chr3_4:75013845-75013864 Msa0521940:CDS 40.0%
TCATCACCTAGCAAGATGAT+GGG + chr3_4:75013846-75013865 Msa0521940:CDS 40.0%
TTTAGTCCCATCATCTTGCT+AGG - chr3_4:75013855-75013874 None:intergenic 40.0%
CTGTAACAACATGGAAGCTT+TGG - chr3_4:75013928-75013947 None:intergenic 40.0%
CAAAGCTTCCATGTTGTTAC+AGG + chr3_4:75013926-75013945 Msa0521940:CDS 40.0%
! TATCAGAAGTCATTTGGTGG+TGG - chr3_4:75014110-75014129 None:intergenic 40.0%
GAGTATCAGAAGTCATTTGG+TGG - chr3_4:75014113-75014132 None:intergenic 40.0%
ATCTAAGAAGAATAGCCGGA+GGG - chr3_4:75014291-75014310 None:intergenic 40.0%
AATCTAAGAAGAATAGCCGG+AGG - chr3_4:75014292-75014311 None:intergenic 40.0%
CTTGTAGACTAACAAACCAG+TGG + chr3_4:75014573-75014592 Msa0521940:intron 40.0%
GGTTATCAAGCTTGAGAACA+TGG + chr3_4:75014619-75014638 Msa0521940:CDS 40.0%
! TTGAGAACATGGGCTACTAT+AGG + chr3_4:75014630-75014649 Msa0521940:CDS 40.0%
! TGAGAACATGGGCTACTATA+GGG + chr3_4:75014631-75014650 Msa0521940:CDS 40.0%
CGAAAACCAGAAGGCAAAAT+GGG - chr3_4:75015042-75015061 None:intergenic 40.0%
ACGAAAACCAGAAGGCAAAA+TGG - chr3_4:75015043-75015062 None:intergenic 40.0%
GGTATGATACGAAAACCAGA+AGG - chr3_4:75015051-75015070 None:intergenic 40.0%
CATACCTCTTGAATCTAGCA+CGG + chr3_4:75015065-75015084 Msa0521940:CDS 40.0%
GAAATTCTTCCGCTTCTTGT+TGG + chr3_4:75015132-75015151 Msa0521940:intron 40.0%
ATCATCACTCCAACAAGAAG+CGG - chr3_4:75015144-75015163 None:intergenic 40.0%
CTTTGTCTTATGTACGATGC+AGG + chr3_4:75015172-75015191 Msa0521940:intron 40.0%
! AATGCTTTTCACTTACCACC+TGG + chr3_4:75015449-75015468 Msa0521940:CDS 40.0%
TGATCTTAATCATGTTCGGG+CGG + chr3_4:75015584-75015603 Msa0521940:intron 40.0%
GCAGAACTACTTAAGTGTGA+AGG + chr3_4:75015640-75015659 Msa0521940:CDS 40.0%
! GGTTCTGTGTTGCTCTTTAA+AGG + chr3_4:75015705-75015724 Msa0521940:CDS 40.0%
GATTTAGCGGTGAGGAATTT+CGG - chr3_4:75015789-75015808 None:intergenic 40.0%
TTTACGTTTGCGAATCAAGC+TGG + chr3_4:75015912-75015931 Msa0521940:CDS 40.0%
TATACCTGCTGCATTATCTG+GGG - chr3_4:75016035-75016054 None:intergenic 40.0%
CTATACCTGCTGCATTATCT+GGG - chr3_4:75016036-75016055 None:intergenic 40.0%
ACTATACCTGCTGCATTATC+TGG - chr3_4:75016037-75016056 None:intergenic 40.0%
!! TGTTAACGGGTATTGGGAAA+TGG + chr3_4:75016088-75016107 Msa0521940:intron 40.0%
CAGGGTTTCATGTGTATTCA+AGG + chr3_4:75016230-75016249 Msa0521940:intron 40.0%
GGTTTCATGTGTATTCAAGG+TGG + chr3_4:75016233-75016252 Msa0521940:CDS 40.0%
TGTGCAATAGGAAGGAAGGA+AGG - chr3_4:75010801-75010820 None:intergenic 45.0%
TGTGTGTGCAATAGGAAGGA+AGG - chr3_4:75010805-75010824 None:intergenic 45.0%
!! TGAGTTGGGTTGGATTTGGA+AGG + chr3_4:75010884-75010903 Msa0521940:five_prime_UTR 45.0%
TGGAAGGTAGCTTAGGATGA+TGG + chr3_4:75010900-75010919 Msa0521940:exon 45.0%
!! CTGCGAAGAGAAGTTGGTTT+TGG - chr3_4:75011036-75011055 None:intergenic 45.0%
CAAAACCAACTTCTCTTCGC+AGG + chr3_4:75011034-75011053 Msa0521940:CDS 45.0%
GAAGGTTACAAGCTGTGAAC+AGG + chr3_4:75011267-75011286 Msa0521940:CDS 45.0%
GCAACTTGACCAGACTCAAA+TGG - chr3_4:75011533-75011552 None:intergenic 45.0%
TGTGAGTCAGTGGTAACAAG+CGG + chr3_4:75011698-75011717 Msa0521940:CDS 45.0%
! CAGACTTTTGTCCATTGCAG+AGG + chr3_4:75011919-75011938 Msa0521940:intron 45.0%
TGCTAAAGTCTCCTCTGCAA+TGG - chr3_4:75011933-75011952 None:intergenic 45.0%
GGGTAATTAACCTTCATCCC+GGG - chr3_4:75012004-75012023 None:intergenic 45.0%
! GAATGTTTTGTAGCCTGGTC+CGG + chr3_4:75012501-75012520 Msa0521940:intron 45.0%
GCAACGATTCCAATGGAATC+CGG - chr3_4:75012523-75012542 None:intergenic 45.0%
TCCTCAAAGATAGGCTCTCA+TGG + chr3_4:75012717-75012736 Msa0521940:CDS 45.0%
ACCATGAGAGCCTATCTTTG+AGG - chr3_4:75012721-75012740 None:intergenic 45.0%
GTTATGTCCACAGGAAATGG+AGG + chr3_4:75012773-75012792 Msa0521940:CDS 45.0%
AATGGTTCCTCCATTTCCTG+TGG - chr3_4:75012783-75012802 None:intergenic 45.0%
GGTCTAATCAGATAACCGCT+AGG - chr3_4:75013228-75013247 None:intergenic 45.0%
TGATTAGACCCTGTGAAGGA+GGG + chr3_4:75013238-75013257 Msa0521940:CDS 45.0%
AAAACTTCAGGCACACTCCA+AGG - chr3_4:75013391-75013410 None:intergenic 45.0%
TAAAGTGGGCGCAAAACTTC+AGG - chr3_4:75013403-75013422 None:intergenic 45.0%
GCTTGCTCAGAGAACAACTA+TGG + chr3_4:75013438-75013457 Msa0521940:CDS 45.0%
GGATTCAACGAAGCTGTCAA+CGG + chr3_4:75013756-75013775 Msa0521940:CDS 45.0%
GATTCAACGAAGCTGTCAAC+GGG + chr3_4:75013757-75013776 Msa0521940:CDS 45.0%
! GTCAACGGGTTTACAGATGA+TGG + chr3_4:75013771-75013790 Msa0521940:CDS 45.0%
!! ACGGGTTTACAGATGATGGA+TGG + chr3_4:75013775-75013794 Msa0521940:CDS 45.0%
TTTGGCACATAGCACAGAAC+TGG - chr3_4:75013910-75013929 None:intergenic 45.0%
GCCGAGTATCAGAAGTCATT+TGG - chr3_4:75014116-75014135 None:intergenic 45.0%
! GCTACATGGACCAGCTTTAA+TGG - chr3_4:75014374-75014393 None:intergenic 45.0%
TGCTCAATTGTGTGAGCTAG+TGG - chr3_4:75014442-75014461 None:intergenic 45.0%
TCACACAATTGAGCACGAAG+AGG + chr3_4:75014447-75014466 Msa0521940:intron 45.0%
AGGGATGATATGACAATGCC+TGG + chr3_4:75014650-75014669 Msa0521940:CDS 45.0%
! CATCTTCCTCAGCTTTGTAG+TGG + chr3_4:75014940-75014959 Msa0521940:intron 45.0%
GAACCACTGGAAACAAAGCA+GGG + chr3_4:75015246-75015265 Msa0521940:CDS 45.0%
AACCACTGGAAACAAAGCAG+GGG + chr3_4:75015247-75015266 Msa0521940:CDS 45.0%
GGGTGACAATTCAGGTCATT+CGG + chr3_4:75015268-75015287 Msa0521940:CDS 45.0%
GGTGACAATTCAGGTCATTC+GGG + chr3_4:75015269-75015288 Msa0521940:CDS 45.0%
! GATGGGCTTCAAATGCAAAC+TGG - chr3_4:75015325-75015344 None:intergenic 45.0%
TCTGAGAACCAAAACGCGAA+GGG - chr3_4:75015430-75015449 None:intergenic 45.0%
! TTCTGAGAACCAAAACGCGA+AGG - chr3_4:75015431-75015450 None:intergenic 45.0%
CTGAAGCACAAACGCTTACT+CGG + chr3_4:75015477-75015496 Msa0521940:CDS 45.0%
GGTGGATCTGTAACAGCTAT+AGG + chr3_4:75015498-75015517 Msa0521940:CDS 45.0%
! CAACGTTTGATTTAGCGGTG+AGG - chr3_4:75015797-75015816 None:intergenic 45.0%
GATGTCTTGAAGTGCAACCA+GGG - chr3_4:75015958-75015977 None:intergenic 45.0%
TGATGTCTTGAAGTGCAACC+AGG - chr3_4:75015959-75015978 None:intergenic 45.0%
ATACCTGCTGCATTATCTGG+GGG - chr3_4:75016034-75016053 None:intergenic 45.0%
TTTGTTTATCCAGCATGGGG+AGG + chr3_4:75016258-75016277 Msa0521940:CDS 45.0%
CTTATGAGAGAGCTGTAGCA+TGG + chr3_4:75016288-75016307 Msa0521940:CDS 45.0%
!!! TTTAAATTTAAATATGATTT+TGG + chr3_4:75015874-75015893 Msa0521940:intron 5.0%
! AGGATGATGGCAGTGAGTTC+AGG + chr3_4:75010913-75010932 Msa0521940:exon 50.0%
AAGGTACACACCAGAGCAAG+TGG + chr3_4:75010981-75011000 Msa0521940:CDS 50.0%
TCAAGTGCTTCCACTTGCTC+TGG - chr3_4:75010994-75011013 None:intergenic 50.0%
TGTTGCCTGCGAAGAGAAGT+TGG - chr3_4:75011042-75011061 None:intergenic 50.0%
GAGAAGCAGAGGAAAGAAGC+TGG + chr3_4:75011245-75011264 Msa0521940:CDS 50.0%
AGCAGAGGAAAGAAGCTGGA+AGG + chr3_4:75011249-75011268 Msa0521940:CDS 50.0%
TACTGGAACCGCTGTTGAGT+GGG + chr3_4:75011970-75011989 Msa0521940:CDS 50.0%
CATTTGGACCCACTCAACAG+CGG - chr3_4:75011981-75012000 None:intergenic 50.0%
TAACCTTCATCCCGGGCATT+TGG - chr3_4:75011997-75012016 None:intergenic 50.0%
ATTCCAATGGAATCCGGACC+AGG - chr3_4:75012517-75012536 None:intergenic 50.0%
GCAATTTCTCATGGTTCCCC+TGG + chr3_4:75012541-75012560 Msa0521940:CDS 50.0%
GTATCGTGATTGCCGAACTG+TGG + chr3_4:75012739-75012758 Msa0521940:CDS 50.0%
GTTGTATGCGCCAACAACTC+TGG + chr3_4:75012943-75012962 Msa0521940:intron 50.0%
! GCTGCGCTACACATCACTTT+TGG + chr3_4:75012988-75013007 Msa0521940:CDS 50.0%
!! GCGCTACACATCACTTTTGG+AGG + chr3_4:75012991-75013010 Msa0521940:CDS 50.0%
TTTGGAGGATGGCAGTCTTG+TGG + chr3_4:75013006-75013025 Msa0521940:CDS 50.0%
! CTAACAAAATGCGGCACTGG+AGG - chr3_4:75013192-75013211 None:intergenic 50.0%
GCTCTAACAAAATGCGGCAC+TGG - chr3_4:75013195-75013214 None:intergenic 50.0%
!! AGAGCTGAAGTGTTGCCTAG+CGG + chr3_4:75013210-75013229 Msa0521940:CDS 50.0%
CTGATTAGACCCTGTGAAGG+AGG + chr3_4:75013237-75013256 Msa0521940:CDS 50.0%
GATTAGACCCTGTGAAGGAG+GGG + chr3_4:75013239-75013258 Msa0521940:CDS 50.0%
ATTAGACCCTGTGAAGGAGG+GGG + chr3_4:75013240-75013259 Msa0521940:CDS 50.0%
TGTTCTCTGAGCAAGCAGCA+TGG - chr3_4:75013434-75013453 None:intergenic 50.0%
GTTTCTCAGCCAAGTGTGAC+AGG + chr3_4:75013593-75013612 Msa0521940:CDS 50.0%
TCAGCCAAGTGTGACAGGAT+GGG + chr3_4:75013598-75013617 Msa0521940:CDS 50.0%
AGCACAGAACTGGTGACAGA+TGG - chr3_4:75013900-75013919 None:intergenic 50.0%
GTCCTTGTAGAATGTCCCTC+CGG + chr3_4:75014273-75014292 Msa0521940:intron 50.0%
TGCGGGAACACAGATCAGAA+TGG + chr3_4:75014314-75014333 Msa0521940:CDS 50.0%
GCGGGAACACAGATCAGAAT+GGG + chr3_4:75014315-75014334 Msa0521940:CDS 50.0%
TCAGCAGCTGCCATTAAAGC+TGG + chr3_4:75014361-75014380 Msa0521940:CDS 50.0%
! TCCTCAGCTTTGTAGTGGAG+TGG + chr3_4:75014945-75014964 Msa0521940:intron 50.0%
TCCACTCCACTACAAAGCTG+AGG - chr3_4:75014949-75014968 None:intergenic 50.0%
! GATGCACCCATTTTGCCTTC+TGG + chr3_4:75015033-75015052 Msa0521940:CDS 50.0%
CTTGCCGTGCTAGATTCAAG+AGG - chr3_4:75015072-75015091 None:intergenic 50.0%
CAGAAGCAAGATCGAGTGTG+CGG - chr3_4:75015214-75015233 None:intergenic 50.0%
CGATCTTGCTTCTGCACTTG+AGG + chr3_4:75015220-75015239 Msa0521940:CDS 50.0%
CTTGCTTCTGCACTTGAGGT+TGG + chr3_4:75015224-75015243 Msa0521940:CDS 50.0%
GGAACCACTGGAAACAAAGC+AGG + chr3_4:75015245-75015264 Msa0521940:CDS 50.0%
ACCACTGGAAACAAAGCAGG+GGG + chr3_4:75015248-75015267 Msa0521940:CDS 50.0%
AAAGCAGGGGGTGACAATTC+AGG + chr3_4:75015260-75015279 Msa0521940:CDS 50.0%
CTGAGAACCAAAACGCGAAG+GGG - chr3_4:75015429-75015448 None:intergenic 50.0%
GTTTGTGCTTCAGGAGTTCC+AGG - chr3_4:75015470-75015489 None:intergenic 50.0%
CGAGTAAGCGTTTGTGCTTC+AGG - chr3_4:75015479-75015498 None:intergenic 50.0%
AAGCACAAACGCTTACTCGG+TGG + chr3_4:75015480-75015499 Msa0521940:CDS 50.0%
CGCATCTGAGTGATGCCAAA+GGG - chr3_4:75015686-75015705 None:intergenic 50.0%
CCTTTGGCATCACTCAGATG+CGG + chr3_4:75015684-75015703 Msa0521940:CDS 50.0%
TGACATGCTTGAAACCACCC+TGG + chr3_4:75015938-75015957 Msa0521940:CDS 50.0%
ATTCCCCCAGATAATGCAGC+AGG + chr3_4:75016028-75016047 Msa0521940:CDS 50.0%
ACAGACGACCCTTGCCACTA+CGG + chr3_4:75011667-75011686 Msa0521940:intron 55.0%
ACTCGTGTCCGTAGTGGCAA+GGG - chr3_4:75011678-75011697 None:intergenic 55.0%
AACTCGTGTCCGTAGTGGCA+AGG - chr3_4:75011679-75011698 None:intergenic 55.0%
CTCACAACTCGTGTCCGTAG+TGG - chr3_4:75011684-75011703 None:intergenic 55.0%
GGACACGAGTTGTGAGTCAG+TGG + chr3_4:75011688-75011707 Msa0521940:CDS 55.0%
CTACTGGAACCGCTGTTGAG+TGG + chr3_4:75011969-75011988 Msa0521940:CDS 55.0%
GTTGAGTGGGTCCAAATGCC+CGG + chr3_4:75011983-75012002 Msa0521940:CDS 55.0%
TTGAGTGGGTCCAAATGCCC+GGG + chr3_4:75011984-75012003 Msa0521940:CDS 55.0%
TAGCCTGGTCCGGATTCCAT+TGG + chr3_4:75012511-75012530 Msa0521940:intron 55.0%
TTCTCATGGTTCCCCTGGAG+TGG + chr3_4:75012546-75012565 Msa0521940:CDS 55.0%
TTGCAGGTTCAAGACCCACG+AGG - chr3_4:75012588-75012607 None:intergenic 55.0%
TCGTGGGTCTTGAACCTGCA+AGG + chr3_4:75012587-75012606 Msa0521940:CDS 55.0%
CGTGGGTCTTGAACCTGCAA+GGG + chr3_4:75012588-75012607 Msa0521940:CDS 55.0%
ATGGATCCCCCTCCTTCACA+GGG - chr3_4:75013249-75013268 None:intergenic 55.0%
TATGGATCCCCCTCCTTCAC+AGG - chr3_4:75013250-75013269 None:intergenic 55.0%
CTCAGCCAAGTGTGACAGGA+TGG + chr3_4:75013597-75013616 Msa0521940:CDS 55.0%
CAGCCAAGTGTGACAGGATG+GGG + chr3_4:75013599-75013618 Msa0521940:CDS 55.0%
CTTCCCCATCCTGTCACACT+TGG - chr3_4:75013605-75013624 None:intergenic 55.0%
CAAGTGTGACAGGATGGGGA+AGG + chr3_4:75013603-75013622 Msa0521940:CDS 55.0%
AGCCGGAGGGACATTCTACA+AGG - chr3_4:75014278-75014297 None:intergenic 55.0%
! CTGGTCCATGTAGCTTGCCA+GGG + chr3_4:75014380-75014399 Msa0521940:CDS 55.0%
! TGGTCCATGTAGCTTGCCAG+GGG + chr3_4:75014381-75014400 Msa0521940:CDS 55.0%
ACCACCAAAAGCTCCTGCTC+GGG - chr3_4:75014407-75014426 None:intergenic 55.0%
GACCACCAAAAGCTCCTGCT+CGG - chr3_4:75014408-75014427 None:intergenic 55.0%
!! AGCAGGAGCTTTTGGTGGTC+AGG + chr3_4:75014408-75014427 Msa0521940:CDS 55.0%
GCAAGATCGAGTGTGCGGTT+AGG - chr3_4:75015209-75015228 None:intergenic 55.0%
GCACTTGAGGTTGGAACCAC+TGG + chr3_4:75015233-75015252 Msa0521940:CDS 55.0%
!! ACCCCCTGCTTTGTTTCCAG+TGG - chr3_4:75015252-75015271 None:intergenic 55.0%
! GCACTTTCCCCTTCGCGTTT+TGG + chr3_4:75015419-75015438 Msa0521940:CDS 55.0%
TGTGCTTCAGGAGTTCCAGG+TGG - chr3_4:75015467-75015486 None:intergenic 55.0%
CCGCATCTGAGTGATGCCAA+AGG - chr3_4:75015687-75015706 None:intergenic 55.0%
GTCTTGAAGTGCAACCAGGG+TGG - chr3_4:75015955-75015974 None:intergenic 55.0%
CTGGGGGAATTCAGAGCACA+GGG - chr3_4:75016018-75016037 None:intergenic 55.0%
TCTGGGGGAATTCAGAGCAC+AGG - chr3_4:75016019-75016038 None:intergenic 55.0%
! AGTTATTGGCCTCCCCATGC+TGG - chr3_4:75016270-75016289 None:intergenic 55.0%
GTGGGCATATGCACCACCTA+TGG + chr3_4:75016485-75016504 Msa0521940:three_prime_UTR 55.0%
GCAGGTGCAGAGAGAAGCAG+AGG + chr3_4:75011234-75011253 Msa0521940:intron 60.0%
CGGTCAGCAGCATCCACCAA+GGG + chr3_4:75011718-75011737 Msa0521940:CDS 60.0%
CAAGGGATGCAAGCCCTGCT+GGG + chr3_4:75011735-75011754 Msa0521940:CDS 60.0%
GGTCCAAATGCCCGGGATGA+AGG + chr3_4:75011991-75012010 Msa0521940:CDS 60.0%
! CGACCTGGTGCCAGAGTTGT+TGG - chr3_4:75012956-75012975 None:intergenic 60.0%
AGCAACCAGAAGTCGCGACC+TGG - chr3_4:75012971-75012990 None:intergenic 60.0%
! TGCGGCACTGGAGGCATACT+AGG - chr3_4:75013183-75013202 None:intergenic 60.0%
GTGTGACAGGATGGGGAAGG+CGG + chr3_4:75013606-75013625 Msa0521940:CDS 60.0%
CTAAGCGCACGTAGAGCTGC+AGG - chr3_4:75013632-75013651 None:intergenic 60.0%
! GCTGGTCCATGTAGCTTGCC+AGG + chr3_4:75014379-75014398 Msa0521940:CDS 60.0%
GGAGTGGACGAGCATGCAGT+TGG + chr3_4:75014961-75014980 Msa0521940:CDS 60.0%
GCGGTCAGCAGCATCCACCA+AGG + chr3_4:75011717-75011736 Msa0521940:CDS 65.0%
GCAGGGCTTGCATCCCTTGG+TGG - chr3_4:75011734-75011753 None:intergenic 65.0%
CCAGCAGGGCTTGCATCCCT+TGG - chr3_4:75011737-75011756 None:intergenic 65.0%
CCAAGGGATGCAAGCCCTGC+TGG + chr3_4:75011734-75011753 Msa0521940:CDS 65.0%
AGGCACGTGCAGCCACTCCA+GGG - chr3_4:75012561-75012580 None:intergenic 65.0%
TTCAAGACCCACGAGGCCGC+AGG - chr3_4:75012581-75012600 None:intergenic 65.0%
GCGCCAACAACTCTGGCACC+AGG + chr3_4:75012950-75012969 Msa0521940:CDS 65.0%
TGGCACCAGGTCGCGACTTC+TGG + chr3_4:75012963-75012982 Msa0521940:CDS 65.0%
! GCCCGAGCAGGAGCTTTTGG+TGG + chr3_4:75014403-75014422 Msa0521940:CDS 65.0%
GGCACGTGCAGCCACTCCAG+GGG - chr3_4:75012560-75012579 None:intergenic 70.0%
CAGGCACGTGCAGCCACTCC+AGG - chr3_4:75012562-75012581 None:intergenic 70.0%
GGAGTGGCTGCACGTGCCTG+CGG + chr3_4:75012562-75012581 Msa0521940:CDS 70.0%
CGGGCCCCTGGCAAGCTACA+TGG - chr3_4:75014388-75014407 None:intergenic 70.0%
AAAGCTCCTGCTCGGGCCCC+TGG - chr3_4:75014400-75014419 None:intergenic 70.0%
! GGGGCCCGAGCAGGAGCTTT+TGG + chr3_4:75014400-75014419 Msa0521940:CDS 70.0%
TGCACGTGCCTGCGGCCTCG+TGG + chr3_4:75012570-75012589 Msa0521940:CDS 75.0%
GCACGTGCCTGCGGCCTCGT+GGG + chr3_4:75012571-75012590 Msa0521940:CDS 75.0%
AGCTTGCCAGGGGCCCGAGC+AGG + chr3_4:75014391-75014410 Msa0521940:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 75010677 75016554 75010677 ID=Msa0521940;Name=Msa0521940
chr3_4 mRNA 75010677 75016554 75010677 ID=Msa0521940-mRNA-1;Parent=Msa0521940;Name=Msa0521940-mRNA-1;_AED=0.13;_eAED=0.13;_QI=239|0.94|0.94|1|1|1|18|175|821
chr3_4 exon 75010677 75011133 75010677 ID=Msa0521940-mRNA-1:exon:21355;Parent=Msa0521940-mRNA-1
chr3_4 exon 75011238 75011397 75011238 ID=Msa0521940-mRNA-1:exon:21356;Parent=Msa0521940-mRNA-1
chr3_4 exon 75011671 75011756 75011671 ID=Msa0521940-mRNA-1:exon:21357;Parent=Msa0521940-mRNA-1
chr3_4 exon 75011922 75012012 75011922 ID=Msa0521940-mRNA-1:exon:21358;Parent=Msa0521940-mRNA-1
chr3_4 exon 75012514 75012609 75012514 ID=Msa0521940-mRNA-1:exon:21359;Parent=Msa0521940-mRNA-1
chr3_4 exon 75012707 75012820 75012707 ID=Msa0521940-mRNA-1:exon:21360;Parent=Msa0521940-mRNA-1
chr3_4 exon 75012944 75013027 75012944 ID=Msa0521940-mRNA-1:exon:21361;Parent=Msa0521940-mRNA-1
chr3_4 exon 75013144 75013299 75013144 ID=Msa0521940-mRNA-1:exon:21362;Parent=Msa0521940-mRNA-1
chr3_4 exon 75013388 75013462 75013388 ID=Msa0521940-mRNA-1:exon:21363;Parent=Msa0521940-mRNA-1
chr3_4 exon 75013560 75013666 75013560 ID=Msa0521940-mRNA-1:exon:21364;Parent=Msa0521940-mRNA-1
chr3_4 exon 75013755 75013947 75013755 ID=Msa0521940-mRNA-1:exon:21365;Parent=Msa0521940-mRNA-1
chr3_4 exon 75014283 75014429 75014283 ID=Msa0521940-mRNA-1:exon:21366;Parent=Msa0521940-mRNA-1
chr3_4 exon 75014611 75014691 75014611 ID=Msa0521940-mRNA-1:exon:21367;Parent=Msa0521940-mRNA-1
chr3_4 exon 75014952 75015086 75014952 ID=Msa0521940-mRNA-1:exon:21368;Parent=Msa0521940-mRNA-1
chr3_4 exon 75015194 75015519 75015194 ID=Msa0521940-mRNA-1:exon:21369;Parent=Msa0521940-mRNA-1
chr3_4 exon 75015627 75015726 75015627 ID=Msa0521940-mRNA-1:exon:21370;Parent=Msa0521940-mRNA-1
chr3_4 exon 75015900 75016049 75015900 ID=Msa0521940-mRNA-1:exon:21371;Parent=Msa0521940-mRNA-1
chr3_4 exon 75016233 75016554 75016233 ID=Msa0521940-mRNA-1:exon:21372;Parent=Msa0521940-mRNA-1
chr3_4 five_prime_UTR 75010677 75010915 75010677 ID=Msa0521940-mRNA-1:five_prime_utr;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75010916 75011133 75010916 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75011238 75011397 75011238 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75011671 75011756 75011671 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75011922 75012012 75011922 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75012514 75012609 75012514 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75012707 75012820 75012707 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75012944 75013027 75012944 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75013144 75013299 75013144 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75013388 75013462 75013388 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75013560 75013666 75013560 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75013755 75013947 75013755 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75014283 75014429 75014283 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75014611 75014691 75014611 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75014952 75015086 75014952 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75015194 75015519 75015194 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75015627 75015726 75015627 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75015900 75016049 75015900 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 CDS 75016233 75016379 75016233 ID=Msa0521940-mRNA-1:cds;Parent=Msa0521940-mRNA-1
chr3_4 three_prime_UTR 75016380 75016554 75016380 ID=Msa0521940-mRNA-1:three_prime_utr;Parent=Msa0521940-mRNA-1
Gene Sequence

>Msa0521940

ATGATGGCAGTGAGTTCAGGATGCAAAGATAGTAGCAAGATAGCAATGGACAATGGAAAGTACGTAAGGTACACACCAGAGCAAGTGGAAGCACTTGAAAGACTCTACCATGAATGTCCAAAACCAACTTCTCTTCGCAGGCAACAACTCATTAGAGAGTGTCCTATTCTCTCTCATATTGAACCTAAACAGATCAAAGTTTGGTTCCAGAACAGAAGGTGCAGAGAGAAGCAGAGGAAAGAAGCTGGAAGGTTACAAGCTGTGAACAGGAAGTTAACAGCAATGAACAAATTGCTTATGGAGGAAAATGATAGATTGCAGAAACAAGTGTCACACCTTGTGTATGAGAACACATTTTTCCGCCAACATACACAAAATACGACCCTTGCCACTACGGACACGAGTTGTGAGTCAGTGGTAACAAGCGGTCAGCAGCATCCACCAAGGGATGCAAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACTTTAGCAGAGTTTCTATCAAAGGCTACTGGAACCGCTGTTGAGTGGGTCCAAATGCCCGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATTTCTCATGGTTCCCCTGGAGTGGCTGCACGTGCCTGCGGCCTCGTGGGTCTTGAACCTGCAAGGGTTGCTGAAATCCTCAAAGATAGGCTCTCATGGTATCGTGATTGCCGAACTGTGGATGTTCTAAATGTTATGTCCACAGGAAATGGAGGAACCATTGAATTGCTTTACATGCAGTTGTATGCGCCAACAACTCTGGCACCAGGTCGCGACTTCTGGTTGCTGCGCTACACATCACTTTTGGAGGATGGCAGTCTTGTGGTGTGTGAAAGATCACTTAACAACACACAGAATGGTCCTAGTATGCCTCCAGTGCCGCATTTTGTTAGAGCTGAAGTGTTGCCTAGCGGTTATCTGATTAGACCCTGTGAAGGAGGGGGATCCATAATTCATATTGTTGATCATATGCTTTTAGAGCCTTGGAGTGTGCCTGAAGTTTTGCGCCCACTTTATGAGTCATCCATGCTGCTTGCTCAGAGAACAACTATGGCAGCTTTACGTCATTTAAGGCAGATTTCTCAAGAAGTTTCTCAGCCAAGTGTGACAGGATGGGGAAGGCGGCCTGCAGCTCTACGTGCGCTTAGTCAAAGATTGAGCAAGGGATTCAACGAAGCTGTCAACGGGTTTACAGATGATGGATGGTCTATGTTAGATAGTGATGGAATTGATGATGTCACCCTTCTTGTGAATTCATCACCTAGCAAGATGATGGGACTAAATCTTGGTTATAACAATGGATTTCCATCTGTCACCAGTTCTGTGCTATGTGCCAAAGCTTCCATGTTGTTACAGAATGTCCCTCCGGCTATTCTTCTTAGATTTTTGCGGGAACACAGATCAGAATGGGCAGATACAAGTATTGATGCTTATTCAGCAGCTGCCATTAAAGCTGGTCCATGTAGCTTGCCAGGGGCCCGAGCAGGAGCTTTTGGTGGTCAGTTCATGGAGGTTATCAAGCTTGAGAACATGGGCTACTATAGGGATGATATGACAATGCCTGGTGATATTTTCCTCTTACAACTTTGTAGTGGAGTGGACGAGCATGCAGTTGGCACAAGTGCAGAGCTTATTTTTGCTCCAATTGATGCATCTTTCTCTGATGATGCACCCATTTTGCCTTCTGGTTTTCGTATCATACCTCTTGAATCTAGCACGGATGCTGCTAGTCCTAACCGCACACTCGATCTTGCTTCTGCACTTGAGGTTGGAACCACTGGAAACAAAGCAGGGGGTGACAATTCAGGTCATTCGGGCAACACAAAATCTGTGATGACAATAGCGTTCCAGTTTGCATTTGAAGCCCATCTTCAAGATAATATCGCAGCTATGGCGCGACAGTATGTGCGTAGCATTGTTGCATCTGTTCAGAGAGTTTCATTAGCACTTTCCCCTTCGCGTTTTGGTTCTCAGAATGCTTTTCACTTACCACCTGGAACTCCTGAAGCACAAACGCTTACTCGGTGGATCTGTAACAGCTATAGATTCAATCTAGGCGCAGAACTACTTAAGTGTGAAGGGAGTGAATCGATACTTAAATCCCTTTGGCATCACTCAGATGCGGTTCTGTGTTGCTCTTTAAAGGCATTACCCGTTTTTACGTTTGCGAATCAAGCTGGACTTGACATGCTTGAAACCACCCTGGTTGCACTTCAAGACATCACCCTAGAAAAGATATTTGATGACAATGGAAAGAAAACCCTGTGCTCTGAATTCCCCCAGATAATGCAGCAGGGTTTCATGTGTATTCAAGGTGGTATTTGTTTATCCAGCATGGGGAGGCCAATAACTTATGAGAGAGCTGTAGCATGGAAAGTATTGAATGAAGAAGAATCTGCTCATTGCATCTGTTTCATGTTCATCAATTGGTCTTTTGTCTAG
Protein sequence

>Msa0521940

MMAVSSGCKDSSKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENTFFRQHTQNTTLATTDTSCESVVTSGQQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLSWYRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPSMPPVPHFVRAEVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFTDDGWSMLDSDGIDDVTLLVNSSPSKMMGLNLGYNNGFPSVTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADTSIDAYSAAAIKAGPCSLPGARAGAFGGQFMEVIKLENMGYYRDDMTMPGDIFLLQLCSGVDEHAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLESSTDAASPNRTLDLASALEVGTTGNKAGGDNSGHSGNTKSVMTIAFQFAFEAHLQDNIAAMARQYVRSIVASVQRVSLALSPSRFGSQNAFHLPPGTPEAQTLTRWICNSYRFNLGAELLKCEGSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCIQGGICLSSMGRPITYERAVAWKVLNEEESAHCICFMFINWSFV*