AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1128650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128650 MtrunA17_Chr7g0273001 96.718 518 17 0 1 518 1 518 0.0 994
Msa1128650 MtrunA17_Chr6g0460831 30.040 496 304 9 55 515 95 582 1.10e-49 179
Msa1128650 MtrunA17_Chr6g0460821 31.697 489 282 13 37 484 60 537 4.85e-45 166
Msa1128650 MtrunA17_Chr8g0344371 28.411 535 303 12 43 508 115 638 1.71e-42 160
Msa1128650 MtrunA17_Chr7g0254091 30.000 410 236 8 59 457 95 464 2.96e-31 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128650 AT1G08960.1 67.790 534 150 6 7 518 13 546 0.0 652
Msa1128650 AT5G17860.1 32.000 475 290 9 59 508 90 556 8.06e-60 207
Msa1128650 AT5G17860.2 31.223 458 281 10 59 508 90 521 2.16e-52 186
Msa1128650 AT1G54115.1 29.190 531 298 13 47 508 109 630 2.64e-51 185
Msa1128650 AT3G14070.1 28.435 524 303 12 49 507 112 628 4.39e-48 176
Msa1128650 AT5G17850.1 29.730 555 322 17 5 511 14 548 2.78e-44 164
Msa1128650 AT5G17850.2 29.730 555 322 17 5 511 14 548 2.78e-44 164

Find 229 sgRNAs with CRISPR-Local

Find 506 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGATTGGGTTTCAAATT+AGG 0.134965 7_3:+80570826 None:intergenic
GAGAAGTTGTTGTGATTAAG+AGG 0.182955 7_3:+80574102 None:intergenic
CGTATTGAGATTATGTTATA+TGG 0.201229 7_3:-80567827 Msa1128650:three_prime_UTR
ACAGGCAAATGCTCTGCTTT+TGG 0.211093 7_3:+80571562 None:intergenic
GGGATTATTTCCTCACTTCT+TGG 0.228457 7_3:-80568188 Msa1128650:three_prime_UTR
CACAGAGGGAAAAGAGTATT+AGG 0.243083 7_3:+80571649 None:intergenic
CACTATTATCATTGCAATAA+TGG 0.247797 7_3:-80574201 Msa1128650:exon
TCTGGATTTCGTGGATCTTT+TGG 0.249144 7_3:-80573417 Msa1128650:CDS
GATTCCGAGTGCCTAGGTTT+TGG 0.249551 7_3:-80571156 Msa1128650:CDS
TTAGGGGATAGGGGTTAGTT+AGG 0.255630 7_3:+80570844 None:intergenic
AGAGATTGGGTTTCAAATTA+GGG 0.264021 7_3:+80570827 None:intergenic
GCAATGAGTTGGATTTATTA+AGG 0.281711 7_3:+80570785 None:intergenic
AAATTAAGTTCATAGGCTTT+AGG 0.315192 7_3:+80571256 None:intergenic
ATTAGGGAGGAGGAAAACTA+TGG 0.320350 7_3:+80571666 None:intergenic
TTCGTCTCTGCTCTTGTTGT+CGG 0.331098 7_3:-80573735 Msa1128650:CDS
GATGAGGAGAATGGAGAGGG+AGG 0.338258 7_3:+80573968 None:intergenic
GAGGGAGGGGATTGAGAGGA+TGG 0.342271 7_3:+80573983 None:intergenic
CCGGAAGCACCTGTTCTTGT+TGG 0.345802 7_3:-80568392 Msa1128650:three_prime_UTR
GTGAATTGCCTTGAAGCTTT+AGG 0.347493 7_3:-80571481 Msa1128650:CDS
CCTTCGTTATGAGTGTGTTT+TGG 0.348369 7_3:-80571528 Msa1128650:CDS
CAACGAGATATCAAAGAGAT+TGG 0.350248 7_3:+80570813 None:intergenic
GGATTATTTCCTCACTTCTT+GGG 0.352175 7_3:-80568187 Msa1128650:three_prime_UTR
CATCCGGCCATTGCCATTGC+CGG 0.357339 7_3:+80571352 None:intergenic
GCAATGGCCGGATGCTTTGC+TGG 0.358095 7_3:-80571343 Msa1128650:CDS
AACAATCCATTTGGCCCACC+TGG 0.365523 7_3:+80567957 None:intergenic
TGTTGGTCTTGGAACTGCTT+TGG 0.368704 7_3:-80571302 Msa1128650:CDS
CCAACAAGAACAGGTGCTTC+CGG 0.371746 7_3:+80568392 None:intergenic
TACTTTGACTGCACAAAACT+TGG 0.387919 7_3:-80568075 Msa1128650:three_prime_UTR
CCTCAATCTCTCTCCTAGTA+TGG 0.388430 7_3:-80573874 Msa1128650:CDS
CGACATTAGCTAAGAGCATT+TGG 0.389034 7_3:-80568310 Msa1128650:three_prime_UTR
CTTCATAGAAAGATTTAGAT+AGG 0.389924 7_3:-80571052 Msa1128650:three_prime_UTR
GGTCAATACCGTACCGGCTT+CGG 0.391101 7_3:-80573780 Msa1128650:CDS
TTCTATATTGTTGCATTGCA+TGG 0.391207 7_3:-80568040 Msa1128650:three_prime_UTR
AAACTATTTAAGAAGAAAAC+TGG 0.396532 7_3:-80570962 Msa1128650:three_prime_UTR
TTTAACATGCTTGTTGGTCT+TGG 0.397900 7_3:-80571313 Msa1128650:CDS
CTCTCAAGCTTAGTGCTAGA+AGG 0.399250 7_3:-80567921 Msa1128650:three_prime_UTR
TGAGGAGAATGGAGAGGGAG+GGG 0.401522 7_3:+80573970 None:intergenic
CAACAAGAACAGGTGCTTCC+GGG 0.405795 7_3:+80568393 None:intergenic
AAAACCTAGGCACTCGGAAT+CGG 0.406998 7_3:+80571158 None:intergenic
GAGGATTAGTGAGAGTGAAA+TGG 0.411408 7_3:+80574169 None:intergenic
TAGTGGACAAAGAGCGATAT+TGG 0.413049 7_3:+80571732 None:intergenic
ATTGAGAGGATGGGAGTTTG+AGG 0.414253 7_3:+80573993 None:intergenic
AGCTTGTTCTGTTGCCCGAC+AGG 0.414924 7_3:+80568980 None:intergenic
GGGTTTCAAATTAGGGGATA+GGG 0.416477 7_3:+80570834 None:intergenic
GAGGGATTGTCAATCTTAAG+AGG 0.419753 7_3:+80571794 None:intergenic
CATTGCGATGGTGCTGGTTG+AGG 0.420449 7_3:+80571775 None:intergenic
TGTACTTGCAACAAATTTCC+AGG 0.422420 7_3:+80568417 None:intergenic
TGGATTGAATGGGGCAAGAT+GGG 0.423000 7_3:+80574048 None:intergenic
ACAAACGGCGCCGGATCAAC+GGG 0.425874 7_3:+80573684 None:intergenic
GTTACCTAGGAAAATCGTTA+TGG 0.427493 7_3:+80568524 None:intergenic
TAGGGGATAGGGGTTAGTTA+GGG 0.431453 7_3:+80570845 None:intergenic
CGGAATTACAAAAGCTGAAG+TGG 0.438591 7_3:-80568211 Msa1128650:three_prime_UTR
GCTAGAAGGTTAATACTAGA+AGG 0.445809 7_3:-80567907 Msa1128650:three_prime_UTR
TGGGTTTCAAATTAGGGGAT+AGG 0.449743 7_3:+80570833 None:intergenic
TGGAGAGGGAGGGGATTGAG+AGG 0.453858 7_3:+80573979 None:intergenic
GCATTTGCCTGTGGTGGTTG+TGG 0.453910 7_3:-80571551 Msa1128650:CDS
GATGCCGCCATTGGATTGAA+TGG 0.456465 7_3:+80574037 None:intergenic
AACGAGATATCAAAGAGATT+GGG 0.460124 7_3:+80570814 None:intergenic
GGATGTAGAAATGGAGGATG+AGG 0.460612 7_3:+80573952 None:intergenic
AAACCTAGGCACTCGGAATC+GGG 0.460770 7_3:+80571159 None:intergenic
CTTTCTCTCCATCAGCCACT+TGG 0.461429 7_3:+80567858 None:intergenic
TTGGATTGAATGGGGCAAGA+TGG 0.462224 7_3:+80574047 None:intergenic
GGAATAAGAAAGAACTGAGT+GGG 0.463568 7_3:-80567886 Msa1128650:three_prime_UTR
TTGAATTGATAAACAAGAAA+CGG 0.464111 7_3:+80569103 None:intergenic
AGAAACCAGGTATCAAGAAC+TGG 0.465897 7_3:+80570915 None:intergenic
ATGCCGCCATTGGATTGAAT+GGG 0.469388 7_3:+80574038 None:intergenic
AAACAATCAACTTGAAAAGA+TGG 0.469803 7_3:+80571078 None:intergenic
CCAATGTTTAACATGCTTGT+TGG 0.469958 7_3:-80571319 Msa1128650:CDS
TTGAGAGGATGGGAGTTTGA+GGG 0.470188 7_3:+80573994 None:intergenic
TCAATTCAAGAAGGCCTGTC+GGG 0.472852 7_3:-80568994 Msa1128650:three_prime_UTR
ACGAAGGCCACAACCACCAC+AGG 0.474486 7_3:+80571544 None:intergenic
ATTGCGATGGTGCTGGTTGA+GGG 0.474576 7_3:+80571776 None:intergenic
GAAGCGTGCCTAAAGCTTCA+AGG 0.475284 7_3:+80571473 None:intergenic
TAGGTCTTACCGTGCTAGCA+TGG 0.482485 7_3:-80571429 Msa1128650:CDS
TGGAAACAACCAACAAGAAC+AGG 0.482886 7_3:+80568383 None:intergenic
CCACTAGTCAAATGATGTAA+TGG 0.483396 7_3:-80568363 Msa1128650:three_prime_UTR
GTTGTTGTGATTAAGAGGGA+TGG 0.483470 7_3:+80574107 None:intergenic
GACAGGAAGCTCCCATGCCT+TGG 0.483478 7_3:+80571822 None:intergenic
GAAAGAACGCGGAAAGGAGA+TGG 0.483997 7_3:-80574309 None:intergenic
AAACTGCCGCAGGCATTCCT+AGG 0.484727 7_3:-80571448 Msa1128650:CDS
TCCTTGTTCTCCAATGTGAC+AGG 0.489100 7_3:-80569078 Msa1128650:three_prime_UTR
GGCGCCGGATCAACGGGAAA+AGG 0.489382 7_3:+80573690 None:intergenic
CCATTACATCATTTGACTAG+TGG 0.490989 7_3:+80568363 None:intergenic
AATTGGTTTATAAAATTGCC+CGG 0.491181 7_3:+80568002 None:intergenic
AACGTGGAAATTAAGTTCAT+AGG 0.491726 7_3:+80571249 None:intergenic
GCGAGAGATGAGAAGACGTC+GGG 0.494583 7_3:+80573816 None:intergenic
AGGAACCCAGGTGGGCCAAA+TGG 0.494754 7_3:-80567963 Msa1128650:three_prime_UTR
CACGCTTCTCAAACTGCCGC+AGG 0.495555 7_3:-80571458 Msa1128650:CDS
GAAATGGAGGATGAGGAGAA+TGG 0.496656 7_3:+80573959 None:intergenic
GAGGATGAGGAGAATGGAGA+GGG 0.497270 7_3:+80573965 None:intergenic
ACAGAGGGAAAAGAGTATTA+GGG 0.497292 7_3:+80571650 None:intergenic
AAAATCCAGTTCTTGATACC+TGG 0.497752 7_3:-80570920 Msa1128650:three_prime_UTR
TCTTTCTCTATTGAAGATTG+AGG 0.498027 7_3:-80570634 Msa1128650:intron
TAGTTGTGACGATTGAGAAA+TGG 0.500180 7_3:+80573910 None:intergenic
AAAGAACGCGGAAAGGAGAT+GGG 0.500583 7_3:-80574308 None:intergenic
GGAAAAGAGTATTAGGGAGG+AGG 0.503216 7_3:+80571656 None:intergenic
GTGAGAGACGAGGAGAAACC+AGG 0.503320 7_3:+80570902 None:intergenic
CTTACTACCAGAGCATCAAA+TGG 0.503841 7_3:-80569039 Msa1128650:three_prime_UTR
AGAAGTTGTTGTGATTAAGA+GGG 0.504857 7_3:+80574103 None:intergenic
GCTTACAGATTTCCAAGGCA+TGG 0.505102 7_3:-80571834 Msa1128650:intron
AACAAACGGCGCCGGATCAA+CGG 0.505525 7_3:+80573683 None:intergenic
GTAGTTGAGGATGCCGCCAT+TGG 0.505638 7_3:+80574028 None:intergenic
AGTTGCTAAAGCTGGTCATC+CGG 0.505727 7_3:-80571371 Msa1128650:CDS
GCCGTCACACTTCTCGCTCT+CGG 0.506649 7_3:-80573849 Msa1128650:CDS
TGCAATGCAACAATATAGAA+AGG 0.507983 7_3:+80568043 None:intergenic
AGGTGGGCCAAATGGATTGT+TGG 0.510861 7_3:-80567955 Msa1128650:three_prime_UTR
GTGATTAAGAGGGATGGAGA+GGG 0.514627 7_3:+80574113 None:intergenic
TGGTCATCCGGCAATGGCAA+TGG 0.515868 7_3:-80571359 Msa1128650:CDS
CTGTTCCATTGCGATGGTGC+TGG 0.516010 7_3:+80571769 None:intergenic
CCATACTAGGAGAGAGATTG+AGG 0.516197 7_3:+80573874 None:intergenic
AAGAGTTCTGCGGATCTTGA+GGG 0.516492 7_3:-80573501 Msa1128650:CDS
AAAGAGTTCTGCGGATCTTG+AGG 0.517795 7_3:-80573502 Msa1128650:CDS
ATTAAGAGGGATGGAGAGGG+AGG 0.519227 7_3:+80574116 None:intergenic
AGTGTGACGGCGGCCATACT+AGG 0.520260 7_3:+80573861 None:intergenic
GTATTGAGATTATGTTATAT+GGG 0.521674 7_3:-80567826 Msa1128650:three_prime_UTR
ATGAGGAGAATGGAGAGGGA+GGG 0.521792 7_3:+80573969 None:intergenic
AAAACTATGGGATGATTAAG+TGG 0.522490 7_3:+80571679 None:intergenic
AACAACACATCTCTAACAAA+CGG 0.524091 7_3:+80573669 None:intergenic
TTTGGGAATGGCCAATCGGA+GGG 0.524305 7_3:-80573526 Msa1128650:CDS
AAACACGCTTCTGGATTTCG+TGG 0.524455 7_3:-80573426 Msa1128650:CDS
CATTGGTCCAGCAAAGCATC+CGG 0.524643 7_3:+80571336 None:intergenic
AGACAATAGCATAGCAGAAG+AGG 0.528204 7_3:+80574283 None:intergenic
GGTTTCAAATTAGGGGATAG+GGG 0.533769 7_3:+80570835 None:intergenic
AGCAGAGACGAAAGCACCGG+CGG 0.534152 7_3:+80573746 None:intergenic
ACCTGTCACATTGGAGAACA+AGG 0.535703 7_3:+80569077 None:intergenic
GAGAGGAGAGAGTATTATCA+AGG 0.536518 7_3:-80567792 Msa1128650:three_prime_UTR
CATCCGGCAATGGCAATGGC+CGG 0.540312 7_3:-80571355 Msa1128650:CDS
CTTACAGATTTCCAAGGCAT+GGG 0.541325 7_3:-80571833 Msa1128650:intron
TCAATGACGAAGAGCAGTGC+AGG 0.542295 7_3:-80568953 Msa1128650:intron
ACCCCATGAGGCTTAAAAGC+AGG 0.545048 7_3:+80571203 None:intergenic
AGGTCTTACCGTGCTAGCAT+GGG 0.548021 7_3:-80571428 Msa1128650:CDS
GGGAGTCACGAGCAATGAGT+TGG 0.549283 7_3:+80570774 None:intergenic
AGGGAGGGGATTGAGAGGAT+GGG 0.549440 7_3:+80573984 None:intergenic
AGGACCAGTGTTAGGAACCC+AGG 0.550048 7_3:-80567975 Msa1128650:three_prime_UTR
GTTTATGCGTATTTGACACC+TGG 0.550987 7_3:-80568435 Msa1128650:three_prime_UTR
CGCGCCGGTCAATACCGTAC+CGG 0.551721 7_3:-80573786 Msa1128650:CDS
GGTCCCGATTCCGAGTGCCT+AGG 0.552227 7_3:-80571162 Msa1128650:CDS
TGAGTTGAGTGTGAGAGACG+AGG 0.553112 7_3:+80570892 None:intergenic
TTTCTTGTCTACAGTTACCT+AGG 0.553185 7_3:+80568511 None:intergenic
AATCTTAAGAGGGTTGAGAC+AGG 0.554164 7_3:+80571805 None:intergenic
CCCACCTGGGTTCCTAACAC+TGG 0.554568 7_3:+80567971 None:intergenic
GGGGTTGTCCAAGTGGCTGA+TGG 0.555275 7_3:-80567866 Msa1128650:three_prime_UTR
TAACTGTAGACAAGAAATGT+TGG 0.558214 7_3:-80568505 Msa1128650:three_prime_UTR
TTCGGCGCTATACTCTCCGC+CGG 0.558460 7_3:-80573762 Msa1128650:CDS
TCTCTCGCCGCTCTTCGCGC+CGG 0.558505 7_3:-80573801 Msa1128650:CDS
GTCAAATACGCATAAACTTG+TGG 0.560739 7_3:+80568441 None:intergenic
TTCAATTCAAGAAGGCCTGT+CGG 0.561563 7_3:-80568995 Msa1128650:three_prime_UTR
GAGATTGGGTTTCAAATTAG+GGG 0.562024 7_3:+80570828 None:intergenic
CATGCATACAAGAGGGCTAG+TGG 0.564229 7_3:+80571715 None:intergenic
AGAAGATGATAATGAGAGTG+AGG 0.566303 7_3:+80574150 None:intergenic
ACACTTCTCGCTCTCGGTAA+CGG 0.567195 7_3:-80573843 Msa1128650:CDS
AGGAATAAGAAAGAACTGAG+TGG 0.567355 7_3:-80567887 Msa1128650:three_prime_UTR
TGAGGAATAGCAATGGAAAG+TGG 0.567770 7_3:-80568466 Msa1128650:three_prime_UTR
TGGATTTGGGAATGGCCAAT+CGG 0.570540 7_3:-80573530 Msa1128650:CDS
TGTGATTAAGAGGGATGGAG+AGG 0.573624 7_3:+80574112 None:intergenic
TCTTGCCCCATTCAATCCAA+TGG 0.576988 7_3:-80574044 Msa1128650:CDS
TGATGAGGATGTAGAAATGG+AGG 0.577881 7_3:+80573946 None:intergenic
GATGTTGCAGTTGCTAAAGC+TGG 0.582356 7_3:-80571379 Msa1128650:CDS
GGAGAGTATAGCGCCGAAGC+CGG 0.582657 7_3:+80573767 None:intergenic
ATCCCCAAAACCTAGGCACT+CGG 0.583255 7_3:+80571152 None:intergenic
CTCAACCAGCACCATCGCAA+TGG 0.584181 7_3:-80571774 Msa1128650:CDS
AGGGATTGTCAATCTTAAGA+GGG 0.584931 7_3:+80571795 None:intergenic
GGTCTCTCTTAGTAATCACT+TGG 0.585616 7_3:-80571183 Msa1128650:CDS
GGATTGAATGGGGCAAGATG+GGG 0.586530 7_3:+80574049 None:intergenic
GGAGGATGAGGAGAATGGAG+AGG 0.588369 7_3:+80573964 None:intergenic
TGAATTTCCCCATGCTAGCA+CGG 0.589057 7_3:+80571420 None:intergenic
GATTGCAATACCTGTCACAT+TGG 0.590216 7_3:+80569068 None:intergenic
ACAATCCATTTGGCCCACCT+GGG 0.590622 7_3:+80567958 None:intergenic
GCTAGCATGGGGAAATTCAG+TGG 0.592549 7_3:-80571416 Msa1128650:CDS
GAAGCCGGTACGGTATTGAC+CGG 0.592685 7_3:+80573782 None:intergenic
ATTTGGGAATGGCCAATCGG+AGG 0.593231 7_3:-80573527 Msa1128650:CDS
TATGAACTTAATTTCCACGT+TGG 0.594331 7_3:-80571247 Msa1128650:CDS
GGAATTACAAAAGCTGAAGT+GGG 0.594798 7_3:-80568210 Msa1128650:three_prime_UTR
AATTTGTTGCAAGTACATCC+CGG 0.595795 7_3:-80568411 Msa1128650:three_prime_UTR
AAGATGGGGCGATGTTGTTG+AGG 0.596259 7_3:+80574063 None:intergenic
CTAGCATGGGGAAATTCAGT+GGG 0.597425 7_3:-80571415 Msa1128650:CDS
TAAAGCTGGTCATCCGGCAA+TGG 0.598791 7_3:-80571365 Msa1128650:CDS
TTAGGGAGGAGGAAAACTAT+GGG 0.599981 7_3:+80571667 None:intergenic
AGCAGAGCATTTGCCTGTGG+TGG 0.606627 7_3:-80571557 Msa1128650:CDS
GTATAGCGCCGAAGCCGGTA+CGG 0.607381 7_3:+80573772 None:intergenic
TGAACACTACGGACCACAGA+GGG 0.608035 7_3:+80571635 None:intergenic
GTATTGACCGGCGCGAAGAG+CGG 0.613005 7_3:+80573794 None:intergenic
ATGAGTTACATGCATACAAG+AGG 0.615518 7_3:+80571707 None:intergenic
ATGCTAGCACGGTAAGACCT+AGG 0.615531 7_3:+80571431 None:intergenic
CCAACAAGCATGTTAAACAT+TGG 0.616677 7_3:+80571319 None:intergenic
AGACAGAATCCCCAAAACCT+AGG 0.616693 7_3:+80571145 None:intergenic
AAGAGCAGAGACGAAAGCAC+CGG 0.618004 7_3:+80573743 None:intergenic
AAAAGCATGAGGAATAGCAA+TGG 0.621608 7_3:-80568473 Msa1128650:three_prime_UTR
TGCTCTTAGCTAATGTCGTG+TGG 0.623659 7_3:+80568315 None:intergenic
GATTGAGAAATGGTGAGAAG+CGG 0.626670 7_3:+80573920 None:intergenic
ACCGAGAGCGAGAAGTGTGA+CGG 0.626907 7_3:+80573848 None:intergenic
ACATCTCTAACAAACGGCGC+CGG 0.629400 7_3:+80573675 None:intergenic
GGCGAGAGATGAGAAGACGT+CGG 0.634201 7_3:+80573815 None:intergenic
AAGTGGGAAAGAACGCGGAA+AGG 0.636423 7_3:-80574315 None:intergenic
ATTCACGAGCTCTCCAGCTG+TGG 0.642513 7_3:+80571498 None:intergenic
GGAAAATGCAGTGGTAGTTG+AGG 0.644910 7_3:+80574015 None:intergenic
AAGAACGCGGAAAGGAGATG+GGG 0.645859 7_3:-80574307 None:intergenic
ATAATTGCTCCCAAGAAGTG+AGG 0.648626 7_3:+80568178 None:intergenic
TAAAATCTGTTCCATTGCGA+TGG 0.654446 7_3:+80571763 None:intergenic
TGCCCCATTCAATCCAATGG+CGG 0.655644 7_3:-80574041 Msa1128650:CDS
GAATAAGAAAGAACTGAGTG+GGG 0.657253 7_3:-80567885 Msa1128650:three_prime_UTR
GGTCTTACCGTGCTAGCATG+GGG 0.659113 7_3:-80571427 Msa1128650:CDS
TGCCGCCATTGGATTGAATG+GGG 0.659131 7_3:+80574039 None:intergenic
GAATTACAAAAGCTGAAGTG+GGG 0.665958 7_3:-80568209 Msa1128650:three_prime_UTR
AATTACAAAAGCTGAAGTGG+GGG 0.666599 7_3:-80568208 Msa1128650:three_prime_UTR
TTGAGGAGTGATCTACGAAG+AGG 0.667500 7_3:+80574080 None:intergenic
TGAGTTACATGCATACAAGA+GGG 0.668778 7_3:+80571708 None:intergenic
ACTCTGCTTACAGATTTCCA+AGG 0.670878 7_3:-80571839 Msa1128650:intron
GAGGGAAAAGAGTATTAGGG+AGG 0.671135 7_3:+80571653 None:intergenic
AATACTTGTTATCTGTACCA+CGG 0.673474 7_3:+80568577 None:intergenic
ATGAACACTACGGACCACAG+AGG 0.674220 7_3:+80571634 None:intergenic
GAGTTTGAGGGAAAATGCAG+TGG 0.675343 7_3:+80574006 None:intergenic
CCAAAACACACTCATAACGA+AGG 0.680133 7_3:+80571528 None:intergenic
AAAAGCAGAGCATTTGCCTG+TGG 0.684107 7_3:-80571560 Msa1128650:CDS
CCAGTGTTAGGAACCCAGGT+GGG 0.686416 7_3:-80567971 Msa1128650:three_prime_UTR
ACTGAGTGGGGTTGTCCAAG+TGG 0.689096 7_3:-80567873 Msa1128650:three_prime_UTR
GCGCTCTTTGAATGGAACCG+TGG 0.689244 7_3:-80568594 Msa1128650:three_prime_UTR
GAAGCTTGTCATGAACACTA+CGG 0.689618 7_3:+80571624 None:intergenic
ATAGAACGCAACGAATCCAA+CGG 0.692109 7_3:+80573581 None:intergenic
TCGGAGGGAAAAGAGTTCTG+CGG 0.694446 7_3:-80573511 Msa1128650:CDS
GGAACTATGTGAAAAGCATG+AGG 0.695196 7_3:-80568484 Msa1128650:three_prime_UTR
ACCAGTGTTAGGAACCCAGG+TGG 0.705970 7_3:-80567972 Msa1128650:three_prime_UTR
TATGGGTGCTGACTGCTGAG+AGG 0.708788 7_3:-80567809 Msa1128650:three_prime_UTR
AGCATGGGGAAATTCAGTGG+GGG 0.714129 7_3:-80571413 Msa1128650:CDS
GTAAGACCTAGGAATGCCTG+CGG 0.717066 7_3:+80571442 None:intergenic
GAGAGCGAGAAGTGTGACGG+CGG 0.717520 7_3:+80573851 None:intergenic
TTACTAAGAGAGACCCCATG+AGG 0.728107 7_3:+80571191 None:intergenic
TAGCATGGGGAAATTCAGTG+GGG 0.756066 7_3:-80571414 Msa1128650:CDS
ATGCAATCACTATACCAACG+TGG 0.773379 7_3:+80571233 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGAATTTTAATCATTATT+AGG + chr7_3:80569251-80569270 None:intergenic 10.0%
!! ATAATTAAATAAAATATTCC+TGG - chr7_3:80570074-80570093 Msa1128650:intron 10.0%
!! TAATTAAATAAAATATTCCT+GGG - chr7_3:80570075-80570094 Msa1128650:intron 10.0%
!!! ATTTTATAAACCAATTTTTT+AGG - chr7_3:80574049-80574068 Msa1128650:CDS 10.0%
!!! GAATTTTCTTATATTATTGA+AGG + chr7_3:80569112-80569131 None:intergenic 15.0%
!! AATTCAATTCAAAAGATTAA+TGG - chr7_3:80569263-80569282 Msa1128650:intron 15.0%
!!! CTAGAATAATTATTTGTTTT+TGG - chr7_3:80571481-80571500 Msa1128650:CDS 15.0%
!!! AATAATTATTTGTTTTTGGT+TGG - chr7_3:80571485-80571504 Msa1128650:CDS 15.0%
!! TTACTAATGTAATCTTTAAT+TGG - chr7_3:80573136-80573155 Msa1128650:intron 15.0%
!! AATATGAAATACAATTGAAA+AGG + chr7_3:80573299-80573318 None:intergenic 15.0%
!! AACTATATAAATTTACATTC+TGG + chr7_3:80573405-80573424 None:intergenic 15.0%
!!! ATTCAAAAGATTAATGGTTT+TGG - chr7_3:80569269-80569288 Msa1128650:intron 20.0%
!!! TTTTTGATAATACAGTAATC+TGG - chr7_3:80569329-80569348 Msa1128650:intron 20.0%
!!! TTTTGATAATACAGTAATCT+GGG - chr7_3:80569330-80569349 Msa1128650:intron 20.0%
!! GAAGATAATTTGAATTTAGA+AGG - chr7_3:80569714-80569733 Msa1128650:intron 20.0%
!! TGAAAAGATTAACAAGTTAA+TGG + chr7_3:80569781-80569800 None:intergenic 20.0%
!!! TAATCTTTTCACACATAATA+TGG - chr7_3:80569790-80569809 Msa1128650:intron 20.0%
!!! AATCTTTTCACACATAATAT+GGG - chr7_3:80569791-80569810 Msa1128650:intron 20.0%
!! CAATTACTATCATATCAAAT+GGG + chr7_3:80569960-80569979 None:intergenic 20.0%
!! ACAATTACTATCATATCAAA+TGG + chr7_3:80569961-80569980 None:intergenic 20.0%
!!! ATTTTTAAAGTGCTACATTT+TGG + chr7_3:80571058-80571077 None:intergenic 20.0%
!!! GTTTTCTTCTTAAATAGTTT+GGG + chr7_3:80571082-80571101 None:intergenic 20.0%
!!! AGTTTTCTTCTTAAATAGTT+TGG + chr7_3:80571083-80571102 None:intergenic 20.0%
!! AAACTATTTAAGAAGAAAAC+TGG - chr7_3:80571082-80571101 Msa1128650:exon 20.0%
!! TTATGAAGTATGAATGATTA+TGG - chr7_3:80571668-80571687 Msa1128650:CDS 20.0%
!!! TTTTTCTACTAAATAACTAC+AGG + chr7_3:80572112-80572131 None:intergenic 20.0%
!! TGTAGTTATTTAGTAGAAAA+AGG - chr7_3:80572111-80572130 Msa1128650:intron 20.0%
!! TTGTTACATTATCTTACAAA+GGG - chr7_3:80572490-80572509 Msa1128650:intron 20.0%
!!! ATACCTGTTATTTATTATCT+AGG - chr7_3:80572895-80572914 Msa1128650:intron 20.0%
!! ATTCCTAGATAATAAATAAC+AGG + chr7_3:80572901-80572920 None:intergenic 20.0%
!! TTGAATTGATAAACAAGAAA+CGG + chr7_3:80572944-80572963 None:intergenic 20.0%
!!! ATCTTTAATTGGTTTTCTTT+TGG - chr7_3:80573147-80573166 Msa1128650:intron 20.0%
!! ATATAAATTTACATTCTGGA+TGG + chr7_3:80573401-80573420 None:intergenic 20.0%
!!! TAAAACTTTTTAGAAATGTG+TGG + chr7_3:80573894-80573913 None:intergenic 20.0%
!!! TTGATGGTATATATTTTGTT+TGG - chr7_3:80573941-80573960 Msa1128650:CDS 20.0%
!! GTATTGAGATTATGTTATAT+GGG - chr7_3:80574218-80574237 Msa1128650:five_prime_UTR 20.0%
! CACTATTATCATTGCAATAA+TGG - chr7_3:80567843-80567862 Msa1128650:three_prime_UTR 25.0%
!! TTTTGTGTTTTACATGGATT+TGG - chr7_3:80568500-80568519 Msa1128650:three_prime_UTR 25.0%
!! TTTGTGTTTTACATGGATTT+GGG - chr7_3:80568501-80568520 Msa1128650:three_prime_UTR 25.0%
!! TTTATCTTTTTCTACAGATC+CGG + chr7_3:80568601-80568620 None:intergenic 25.0%
! GATATAATTCATTCATAGCT+TGG - chr7_3:80568884-80568903 Msa1128650:intron 25.0%
!! GAAAAATTAGTTTACACTGA+CGG - chr7_3:80568945-80568964 Msa1128650:intron 25.0%
!! ACCTGATTTTGAATAAAACA+GGG + chr7_3:80568989-80569008 None:intergenic 25.0%
!! AACCTGATTTTGAATAAAAC+AGG + chr7_3:80568990-80569009 None:intergenic 25.0%
!!! TACTTATTAGTTAACTTGCT+TGG - chr7_3:80569033-80569052 Msa1128650:three_prime_UTR 25.0%
!!! TTCTAAAATTGGTTACTCAT+AGG - chr7_3:80569059-80569078 Msa1128650:three_prime_UTR 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr7_3:80569366-80569385 Msa1128650:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr7_3:80569508-80569527 Msa1128650:intron 25.0%
! GATCTATCAAAAACCATATT+TGG + chr7_3:80569548-80569567 None:intergenic 25.0%
! TACAACTCATCATACAAAAA+AGG + chr7_3:80569654-80569673 None:intergenic 25.0%
!! ATCTTTTCACACATAATATG+GGG - chr7_3:80569792-80569811 Msa1128650:intron 25.0%
!! GTTCTTTTTCCAATACAAAA+TGG + chr7_3:80570460-80570479 None:intergenic 25.0%
! AAATTAAGTTCATAGGCTTT+AGG + chr7_3:80570791-80570810 None:intergenic 25.0%
! AAACAATCAACTTGAAAAGA+TGG + chr7_3:80570969-80570988 None:intergenic 25.0%
! CTTCATAGAAAGATTTAGAT+AGG - chr7_3:80570992-80571011 Msa1128650:three_prime_UTR 25.0%
!!! CTACATTTTGGTTTTGAATA+TGG + chr7_3:80571046-80571065 None:intergenic 25.0%
!!! TGTATTTTAGAATGCACTAA+GGG + chr7_3:80571293-80571312 None:intergenic 25.0%
!!! TTCATTCATGCAATTTGTTT+TGG - chr7_3:80571452-80571471 Msa1128650:CDS 25.0%
! TATTCCAACAAATTTCAGTT+TGG - chr7_3:80571554-80571573 Msa1128650:CDS 25.0%
! ACAGTTGAAAATATTGAACA+AGG - chr7_3:80571946-80571965 Msa1128650:intron 25.0%
! CAGTTGAAAATATTGAACAA+GGG - chr7_3:80571947-80571966 Msa1128650:intron 25.0%
! TTTCATGTCTCTTAGAATTT+GGG - chr7_3:80572136-80572155 Msa1128650:intron 25.0%
!! TGATTATTTCTTGAGAAGAT+AGG - chr7_3:80572437-80572456 Msa1128650:intron 25.0%
! CTTTGTAAGATAATGTAACA+AGG + chr7_3:80572491-80572510 None:intergenic 25.0%
! CTTGTTACATTATCTTACAA+AGG - chr7_3:80572489-80572508 Msa1128650:intron 25.0%
! TGTTACATTATCTTACAAAG+GGG - chr7_3:80572491-80572510 Msa1128650:intron 25.0%
! GATAATAAATAACAGGTATG+TGG + chr7_3:80572894-80572913 None:intergenic 25.0%
! ATGGAAAAAAGAGATGAAAA+AGG - chr7_3:80573024-80573043 Msa1128650:intron 25.0%
!! AAAAGGTTTTCAATTCAAGA+AGG - chr7_3:80573041-80573060 Msa1128650:intron 25.0%
!! TTGGTTGACCTATTTTATTA+TGG - chr7_3:80573207-80573226 Msa1128650:intron 25.0%
! TTGTTGCTCCATAATAAAAT+AGG + chr7_3:80573218-80573237 None:intergenic 25.0%
!! TGTATTTTATTGTTCTGTGT+GGG - chr7_3:80573758-80573777 Msa1128650:CDS 25.0%
!!! ATTTCTTTGTCACTTTTACA+CGG - chr7_3:80573806-80573825 Msa1128650:CDS 25.0%
!! AATTGGTTTATAAAATTGCC+CGG + chr7_3:80574045-80574064 None:intergenic 25.0%
! CGTATTGAGATTATGTTATA+TGG - chr7_3:80574217-80574236 Msa1128650:five_prime_UTR 25.0%
AGAAGTTGTTGTGATTAAGA+GGG + chr7_3:80567944-80567963 None:intergenic 30.0%
! TTTTGATGAGGATGTAGAAA+TGG + chr7_3:80568104-80568123 None:intergenic 30.0%
AACAACACATCTCTAACAAA+CGG + chr7_3:80568378-80568397 None:intergenic 30.0%
!! TTAGTGCTGAGATTTTTCTA+TGG - chr7_3:80568436-80568455 Msa1128650:three_prime_UTR 30.0%
!!! TGTTGGTTTTGTGTTTTACA+TGG - chr7_3:80568494-80568513 Msa1128650:three_prime_UTR 30.0%
!! ACTTTCAATTAGCTTTGTGA+TGG - chr7_3:80568665-80568684 Msa1128650:intron 30.0%
!!! AATTAGCTTTGTGATGGTTT+TGG - chr7_3:80568671-80568690 Msa1128650:intron 30.0%
GACAATGCATAAAATATGCA+AGG - chr7_3:80568746-80568765 Msa1128650:intron 30.0%
!!! ACGTATTTTTTCTTTGGTAG+TGG + chr7_3:80568791-80568810 None:intergenic 30.0%
!!! AAGCACACGTATTTTTTCTT+TGG + chr7_3:80568797-80568816 None:intergenic 30.0%
!! TCCCTGTTTTATTCAAAATC+AGG - chr7_3:80568985-80569004 Msa1128650:three_prime_UTR 30.0%
!! TTGCTTGGACTTTCTAAAAT+TGG - chr7_3:80569048-80569067 Msa1128650:three_prime_UTR 30.0%
CATTGTTTCAAGGTTACATA+TGG + chr7_3:80569198-80569217 None:intergenic 30.0%
CATATGTAACCTTGAAACAA+TGG - chr7_3:80569196-80569215 Msa1128650:intron 30.0%
CTCAGTTATAGTAGAAAAGT+TGG - chr7_3:80569355-80569374 Msa1128650:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr7_3:80569432-80569451 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr7_3:80569433-80569452 Msa1128650:intron 30.0%
! TTTTCTAATGGTTTCTCGAA+TGG + chr7_3:80569501-80569520 None:intergenic 30.0%
! CACCTCTAAATCTTTTCTAA+TGG + chr7_3:80569513-80569532 None:intergenic 30.0%
! GAATGAGTTGAATCCAAATA+TGG - chr7_3:80569532-80569551 Msa1128650:intron 30.0%
! TGGTTTTTGATAGATCACTA+TGG - chr7_3:80569552-80569571 Msa1128650:intron 30.0%
TGTATGATGAGTTGTAGTAA+TGG - chr7_3:80569658-80569677 Msa1128650:intron 30.0%
CACAATCGTTATTTATGTTG+TGG - chr7_3:80569745-80569764 Msa1128650:intron 30.0%
! TCTTTTCACACATAATATGG+GGG - chr7_3:80569793-80569812 Msa1128650:intron 30.0%
ATTTAATGTCTACCGACAAA+GGG + chr7_3:80569835-80569854 None:intergenic 30.0%
TAAAGTCTACTATCACTAAG+TGG + chr7_3:80570010-80570029 None:intergenic 30.0%
TTAGTGATAGTAGACTTTAG+TGG - chr7_3:80570011-80570030 Msa1128650:intron 30.0%
!!! CCTATCTAATTTTTTTACCC+AGG + chr7_3:80570095-80570114 None:intergenic 30.0%
CCTGGGTAAAAAAATTAGAT+AGG - chr7_3:80570092-80570111 Msa1128650:intron 30.0%
! ATGGAACAGATTTTATGCAT+CGG - chr7_3:80570289-80570308 Msa1128650:intron 30.0%
AAAACTATGGGATGATTAAG+TGG + chr7_3:80570368-80570387 None:intergenic 30.0%
! TGCATTTCTCCATTTTGTAT+TGG - chr7_3:80570448-80570467 Msa1128650:intron 30.0%
AACGTGGAAATTAAGTTCAT+AGG + chr7_3:80570798-80570817 None:intergenic 30.0%
TATGAACTTAATTTCCACGT+TGG - chr7_3:80570797-80570816 Msa1128650:three_prime_UTR 30.0%
!!! AGGCCTCTATATTGTTTTTA+TGG - chr7_3:80570925-80570944 Msa1128650:three_prime_UTR 30.0%
CTGCCATAAAAACAATATAG+AGG + chr7_3:80570931-80570950 None:intergenic 30.0%
!! CAAAACTTGTGTTTTTGAAC+AGG + chr7_3:80571018-80571037 None:intergenic 30.0%
!!! ATTTTTTGCACAAAACGGAA+CGG + chr7_3:80571109-80571128 None:intergenic 30.0%
!!! ACTGGATTTTTTGCACAAAA+CGG + chr7_3:80571114-80571133 None:intergenic 30.0%
AGAGATTGGGTTTCAAATTA+GGG + chr7_3:80571220-80571239 None:intergenic 30.0%
AAGAGATTGGGTTTCAAATT+AGG + chr7_3:80571221-80571240 None:intergenic 30.0%
AACGAGATATCAAAGAGATT+GGG + chr7_3:80571233-80571252 None:intergenic 30.0%
! GCAATGAGTTGGATTTATTA+AGG + chr7_3:80571262-80571281 None:intergenic 30.0%
!!! GTGTATTTTAGAATGCACTA+AGG + chr7_3:80571294-80571313 None:intergenic 30.0%
TCTTTCTCTATTGAAGATTG+AGG - chr7_3:80571410-80571429 Msa1128650:CDS 30.0%
AACACCAAACTGAAATTTGT+TGG + chr7_3:80571561-80571580 None:intergenic 30.0%
AAATGACCTTCAAAACTTCA+TGG + chr7_3:80571591-80571610 None:intergenic 30.0%
TGCACAAGATAATTGGAATT+TGG + chr7_3:80571832-80571851 None:intergenic 30.0%
ACAAACTTGCACAAGATAAT+TGG + chr7_3:80571839-80571858 None:intergenic 30.0%
CTTTCATGTCTCTTAGAATT+TGG - chr7_3:80572135-80572154 Msa1128650:intron 30.0%
TTAACTCATCCTTACAAAAC+TGG - chr7_3:80572165-80572184 Msa1128650:intron 30.0%
!!! TTTTAAGCATTGGCTTTAAG+AGG + chr7_3:80572394-80572413 None:intergenic 30.0%
! CAGGTTTTCATTTTAAGCAT+TGG + chr7_3:80572404-80572423 None:intergenic 30.0%
!! GAAGATAGGACTTGTTAATT+TGG - chr7_3:80572451-80572470 Msa1128650:intron 30.0%
!! GACTTGTTAATTTGGAGATA+CGG - chr7_3:80572459-80572478 Msa1128650:intron 30.0%
TACAGAAGATGAAAGAACAA+AGG + chr7_3:80572545-80572564 None:intergenic 30.0%
GAAATATACAAGAACGCTTT+GGG + chr7_3:80572711-80572730 None:intergenic 30.0%
TGAAATATACAAGAACGCTT+TGG + chr7_3:80572712-80572731 None:intergenic 30.0%
AAACAGAATTGTTTCAGTGA+GGG - chr7_3:80572775-80572794 Msa1128650:intron 30.0%
AGGAAATCTATAAGTAGCAA+TGG - chr7_3:80572804-80572823 Msa1128650:intron 30.0%
!! AATACTTGTTATCTGTACCA+CGG + chr7_3:80573470-80573489 None:intergenic 30.0%
TAACTGTAGACAAGAAATGT+TGG - chr7_3:80573539-80573558 Msa1128650:CDS 30.0%
! CTGTATTTTATTGTTCTGTG+TGG - chr7_3:80573757-80573776 Msa1128650:CDS 30.0%
! GAAGTGAACTTAACTTTTGA+TGG - chr7_3:80573925-80573944 Msa1128650:CDS 30.0%
TGCAATGCAACAATATAGAA+AGG + chr7_3:80574004-80574023 None:intergenic 30.0%
TTCTATATTGTTGCATTGCA+TGG - chr7_3:80574004-80574023 Msa1128650:CDS 30.0%
TAACACTGGTCCTAAAAAAT+TGG + chr7_3:80574062-80574081 None:intergenic 30.0%
!!! AATTTTTTAGGACCAGTGTT+AGG - chr7_3:80574061-80574080 Msa1128650:CDS 30.0%
! AGAAGATGATAATGAGAGTG+AGG + chr7_3:80567897-80567916 None:intergenic 35.0%
GAGAAGTTGTTGTGATTAAG+AGG + chr7_3:80567945-80567964 None:intergenic 35.0%
TAGTTGTGACGATTGAGAAA+TGG + chr7_3:80568137-80568156 None:intergenic 35.0%
! GCGTTCTATCTTTTCTTTGT+TGG - chr7_3:80568477-80568496 Msa1128650:three_prime_UTR 35.0%
! GTTTTACATGGATTTGGGAA+TGG - chr7_3:80568506-80568525 Msa1128650:three_prime_UTR 35.0%
GAAAAAGATAAACACGCTTC+TGG - chr7_3:80568609-80568628 Msa1128650:intron 35.0%
!! ATTTCGTGGATCTTTTGGTT+CGG - chr7_3:80568632-80568651 Msa1128650:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr7_3:80568751-80568770 Msa1128650:intron 35.0%
!!! TTTTTTCTTTGGTAGTGGCT+GGG + chr7_3:80568786-80568805 None:intergenic 35.0%
!!! ATTTTTTCTTTGGTAGTGGC+TGG + chr7_3:80568787-80568806 None:intergenic 35.0%
!! AGGTTTGTTAAACACTTGCA+CGG - chr7_3:80569005-80569024 Msa1128650:three_prime_UTR 35.0%
ACATCAAATGAATAGCTCCA+AGG + chr7_3:80569222-80569241 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr7_3:80569375-80569394 Msa1128650:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr7_3:80569380-80569399 Msa1128650:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr7_3:80569436-80569455 Msa1128650:intron 35.0%
! GTTTCTCGAATGGTTTTCTT+AGG + chr7_3:80569491-80569510 None:intergenic 35.0%
GGTATATGTTTCTCAAGTTC+TGG - chr7_3:80569679-80569698 Msa1128650:intron 35.0%
GATTTAATGTCTACCGACAA+AGG + chr7_3:80569836-80569855 None:intergenic 35.0%
TGTCGGTAGACATTAAATCA+AGG - chr7_3:80569837-80569856 Msa1128650:intron 35.0%
TGATCATAGTAGCATCAACT+AGG + chr7_3:80569936-80569955 None:intergenic 35.0%
GAAATCTGTAAGCAGAGTAT+GGG + chr7_3:80570203-80570222 None:intergenic 35.0%
AGGGATTGTCAATCTTAAGA+GGG + chr7_3:80570252-80570271 None:intergenic 35.0%
TAAAATCTGTTCCATTGCGA+TGG + chr7_3:80570284-80570303 None:intergenic 35.0%
TGAGTTACATGCATACAAGA+GGG + chr7_3:80570339-80570358 None:intergenic 35.0%
ATGAGTTACATGCATACAAG+AGG + chr7_3:80570340-80570359 None:intergenic 35.0%
!! ACAGAGGGAAAAGAGTATTA+GGG + chr7_3:80570397-80570416 None:intergenic 35.0%
CCAACAAGCATGTTAAACAT+TGG + chr7_3:80570728-80570747 None:intergenic 35.0%
CCAATGTTTAACATGCTTGT+TGG - chr7_3:80570725-80570744 Msa1128650:three_prime_UTR 35.0%
! TTTAACATGCTTGTTGGTCT+TGG - chr7_3:80570731-80570750 Msa1128650:three_prime_UTR 35.0%
!!! TTTTTTGCACAAAACGGAAC+GGG + chr7_3:80571108-80571127 None:intergenic 35.0%
AAAATCCAGTTCTTGATACC+TGG - chr7_3:80571124-80571143 Msa1128650:CDS 35.0%
GAGATTGGGTTTCAAATTAG+GGG + chr7_3:80571219-80571238 None:intergenic 35.0%
CAACGAGATATCAAAGAGAT+TGG + chr7_3:80571234-80571253 None:intergenic 35.0%
TTCAAGAGAAGAAAGCTTCA+AGG + chr7_3:80571513-80571532 None:intergenic 35.0%
ATGATTCTCTCTATGCTTTC+TGG - chr7_3:80571695-80571714 Msa1128650:CDS 35.0%
TGATTCTCTCTATGCTTTCT+GGG - chr7_3:80571696-80571715 Msa1128650:CDS 35.0%
! TGGGTTTTCTTGCACAAATT+TGG - chr7_3:80571715-80571734 Msa1128650:CDS 35.0%
!! TTTTGGTGGTATTAAGCTTG+TGG - chr7_3:80571774-80571793 Msa1128650:CDS 35.0%
!! AGTTTTATGCTGAATCTGCT+TGG - chr7_3:80571872-80571891 Msa1128650:intron 35.0%
ATGTCTCTTAGAATTTGGGT+TGG - chr7_3:80572140-80572159 Msa1128650:intron 35.0%
!! CCTTAAATGCCAGTTTTGTA+AGG + chr7_3:80572177-80572196 None:intergenic 35.0%
CCTTACAAAACTGGCATTTA+AGG - chr7_3:80572174-80572193 Msa1128650:intron 35.0%
! AAAACTGGCATTTAAGGTGT+GGG - chr7_3:80572180-80572199 Msa1128650:intron 35.0%
TTTCATTGTGTAGGTGTGAA+GGG + chr7_3:80572269-80572288 None:intergenic 35.0%
! TTTAAGAGGAAGCGTGTTAA+TGG + chr7_3:80572380-80572399 None:intergenic 35.0%
TAATCATCATCTCACTCTTC+AGG + chr7_3:80572423-80572442 None:intergenic 35.0%
!!! AAGGGGCTATTTTGATAACA+TGG - chr7_3:80572508-80572527 Msa1128650:intron 35.0%
!!! AGGGGCTATTTTGATAACAT+GGG - chr7_3:80572509-80572528 Msa1128650:intron 35.0%
ATCACCGAAGAAAAATGAGA+AGG + chr7_3:80572602-80572621 None:intergenic 35.0%
GAAACAGAATTGTTTCAGTG+AGG - chr7_3:80572774-80572793 Msa1128650:intron 35.0%
TTGTGGCTGTAACAATAGTT+TGG - chr7_3:80572842-80572861 Msa1128650:intron 35.0%
TAAATAACAGGTATGTGGCA+AGG + chr7_3:80572889-80572908 None:intergenic 35.0%
ACAAGAAACGGCTAAATCAT+AGG + chr7_3:80572932-80572951 None:intergenic 35.0%
!!! CTTTTTTCCATTTGATGCTC+TGG + chr7_3:80573015-80573034 None:intergenic 35.0%
! CTTTCCATAACGATTTTCCT+AGG - chr7_3:80573516-80573535 Msa1128650:CDS 35.0%
GTTACCTAGGAAAATCGTTA+TGG + chr7_3:80573523-80573542 None:intergenic 35.0%
TTTCTTGTCTACAGTTACCT+AGG + chr7_3:80573536-80573555 None:intergenic 35.0%
! AAAAGCATGAGGAATAGCAA+TGG - chr7_3:80573571-80573590 Msa1128650:CDS 35.0%
GTCAAATACGCATAAACTTG+TGG + chr7_3:80573606-80573625 None:intergenic 35.0%
TGTACTTGCAACAAATTTCC+AGG + chr7_3:80573630-80573649 None:intergenic 35.0%
!! AATTTGTTGCAAGTACATCC+CGG - chr7_3:80573633-80573652 Msa1128650:CDS 35.0%
CCATTACATCATTTGACTAG+TGG + chr7_3:80573684-80573703 None:intergenic 35.0%
CCACTAGTCAAATGATGTAA+TGG - chr7_3:80573681-80573700 Msa1128650:CDS 35.0%
GGAATTACAAAAGCTGAAGT+GGG - chr7_3:80573834-80573853 Msa1128650:CDS 35.0%
GAATTACAAAAGCTGAAGTG+GGG - chr7_3:80573835-80573854 Msa1128650:CDS 35.0%
AATTACAAAAGCTGAAGTGG+GGG - chr7_3:80573836-80573855 Msa1128650:CDS 35.0%
GGATTATTTCCTCACTTCTT+GGG - chr7_3:80573857-80573876 Msa1128650:CDS 35.0%
TACTTTGACTGCACAAAACT+TGG - chr7_3:80573969-80573988 Msa1128650:CDS 35.0%
! ATGGTTAAGAAGCAGTTTTC+CGG - chr7_3:80574023-80574042 Msa1128650:CDS 35.0%
! TGTTTTGCCAACAATCCATT+TGG + chr7_3:80574099-80574118 None:intergenic 35.0%
GCTAGAAGGTTAATACTAGA+AGG - chr7_3:80574137-80574156 Msa1128650:CDS 35.0%
AGGAATAAGAAAGAACTGAG+TGG - chr7_3:80574157-80574176 Msa1128650:CDS 35.0%
GGAATAAGAAAGAACTGAGT+GGG - chr7_3:80574158-80574177 Msa1128650:CDS 35.0%
GAATAAGAAAGAACTGAGTG+GGG - chr7_3:80574159-80574178 Msa1128650:CDS 35.0%
AGACAATAGCATAGCAGAAG+AGG + chr7_3:80567764-80567783 None:intergenic 40.0%
! GAGGATTAGTGAGAGTGAAA+TGG + chr7_3:80567878-80567897 None:intergenic 40.0%
GTTGTTGTGATTAAGAGGGA+TGG + chr7_3:80567940-80567959 None:intergenic 40.0%
TGATGAGGATGTAGAAATGG+AGG + chr7_3:80568101-80568120 None:intergenic 40.0%
GATTGAGAAATGGTGAGAAG+CGG + chr7_3:80568127-80568146 None:intergenic 40.0%
! ATTTTTCTATGGCAAGCCGT+TGG - chr7_3:80568447-80568466 Msa1128650:three_prime_UTR 40.0%
ATAGAACGCAACGAATCCAA+CGG + chr7_3:80568466-80568485 None:intergenic 40.0%
!! TATTACGACGAAAAAGCGTC+CGG - chr7_3:80568579-80568598 Msa1128650:three_prime_UTR 40.0%
! TCTGGATTTCGTGGATCTTT+TGG - chr7_3:80568627-80568646 Msa1128650:intron 40.0%
! TGAAAGCACACGTATACGAA+AGG + chr7_3:80568697-80568716 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr7_3:80568752-80568771 Msa1128650:intron 40.0%
!!! TTTTTCTTTGGTAGTGGCTG+GGG + chr7_3:80568785-80568804 None:intergenic 40.0%
!! GGTTTGTTAAACACTTGCAC+GGG - chr7_3:80569006-80569025 Msa1128650:three_prime_UTR 40.0%
TAACCTTGAAACAATGGCCT+TGG - chr7_3:80569202-80569221 Msa1128650:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr7_3:80569423-80569442 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr7_3:80569461-80569480 Msa1128650:intron 40.0%
!! ATGTTTCTCAAGTTCTGGAC+AGG - chr7_3:80569684-80569703 Msa1128650:intron 40.0%
TTTCACACATAATATGGGGG+AGG - chr7_3:80569796-80569815 Msa1128650:intron 40.0%
GACATTAAATCAAGGACAGC+TGG - chr7_3:80569845-80569864 Msa1128650:intron 40.0%
GAAATGTTATGCATCGTGTG+TGG - chr7_3:80570114-80570133 Msa1128650:intron 40.0%
GGAAATCTGTAAGCAGAGTA+TGG + chr7_3:80570204-80570223 None:intergenic 40.0%
ACTCTGCTTACAGATTTCCA+AGG - chr7_3:80570205-80570224 Msa1128650:intron 40.0%
CTTACAGATTTCCAAGGCAT+GGG - chr7_3:80570211-80570230 Msa1128650:intron 40.0%
AATCTTAAGAGGGTTGAGAC+AGG + chr7_3:80570242-80570261 None:intergenic 40.0%
GAGGGATTGTCAATCTTAAG+AGG + chr7_3:80570253-80570272 None:intergenic 40.0%
! TAGTGGACAAAGAGCGATAT+TGG + chr7_3:80570315-80570334 None:intergenic 40.0%
TTAGGGAGGAGGAAAACTAT+GGG + chr7_3:80570380-80570399 None:intergenic 40.0%
ATTAGGGAGGAGGAAAACTA+TGG + chr7_3:80570381-80570400 None:intergenic 40.0%
!! CACAGAGGGAAAAGAGTATT+AGG + chr7_3:80570398-80570417 None:intergenic 40.0%
! CTAATACTCTTTTCCCTCTG+TGG - chr7_3:80570396-80570415 Msa1128650:intron 40.0%
GAAGCTTGTCATGAACACTA+CGG + chr7_3:80570423-80570442 None:intergenic 40.0%
CCAAAACACACTCATAACGA+AGG + chr7_3:80570519-80570538 None:intergenic 40.0%
! CCTTCGTTATGAGTGTGTTT+TGG - chr7_3:80570516-80570535 Msa1128650:intron 40.0%
! TTTTGGATATCTACCACAGC+TGG - chr7_3:80570533-80570552 Msa1128650:intron 40.0%
GTGAATTGCCTTGAAGCTTT+AGG - chr7_3:80570563-80570582 Msa1128650:intron 40.0%
ATGCAATCACTATACCAACG+TGG + chr7_3:80570814-80570833 None:intergenic 40.0%
!! TTCCTGCTTTTAAGCCTCAT+GGG - chr7_3:80570839-80570858 Msa1128650:three_prime_UTR 40.0%
GGTCTCTCTTAGTAATCACT+TGG - chr7_3:80570861-80570880 Msa1128650:three_prime_UTR 40.0%
AGAAACCAGGTATCAAGAAC+TGG + chr7_3:80571132-80571151 None:intergenic 40.0%
!! TAGTTAGGGTTTTTCAGCTG+TGG + chr7_3:80571188-80571207 None:intergenic 40.0%
GGTTTCAAATTAGGGGATAG+GGG + chr7_3:80571212-80571231 None:intergenic 40.0%
GGGTTTCAAATTAGGGGATA+GGG + chr7_3:80571213-80571232 None:intergenic 40.0%
TGGGTTTCAAATTAGGGGAT+AGG + chr7_3:80571214-80571233 None:intergenic 40.0%
AGCTTTCTTCTCTTGAAGCT+CGG - chr7_3:80571516-80571535 Msa1128650:CDS 40.0%
!! CACTCTCCATGAAGTTTTGA+AGG - chr7_3:80571582-80571601 Msa1128650:CDS 40.0%
!! TTTTGAAGGTCATTTCCTGC+AGG - chr7_3:80571596-80571615 Msa1128650:CDS 40.0%
!! GCTATGGTGCTAATGAGTTT+TGG - chr7_3:80571757-80571776 Msa1128650:CDS 40.0%
!! ATGGTGCTAATGAGTTTTGG+TGG - chr7_3:80571760-80571779 Msa1128650:CDS 40.0%
CAGAGTCATGCATATGCATA+TGG - chr7_3:80571900-80571919 Msa1128650:intron 40.0%
AGTCATGCATATGCATATGG+TGG - chr7_3:80571903-80571922 Msa1128650:intron 40.0%
GTCATGCATATGCATATGGT+GGG - chr7_3:80571904-80571923 Msa1128650:intron 40.0%
ACATCAGGACATTGGCATTT+AGG - chr7_3:80571995-80572014 Msa1128650:intron 40.0%
GGACATTGGCATTTAGGAAA+TGG - chr7_3:80572001-80572020 Msa1128650:intron 40.0%
! CAAAACTGGCATTTAAGGTG+TGG - chr7_3:80572179-80572198 Msa1128650:intron 40.0%
ATTTAGTCCCACATTGCCTA+GGG + chr7_3:80572241-80572260 None:intergenic 40.0%
TTCATTGTGTAGGTGTGAAG+GGG + chr7_3:80572268-80572287 None:intergenic 40.0%
CTTTCATTGTGTAGGTGTGA+AGG + chr7_3:80572270-80572289 None:intergenic 40.0%
! CACCTACACAATGAAAGTGT+TGG - chr7_3:80572273-80572292 Msa1128650:intron 40.0%
CTCCAACACTTTCATTGTGT+AGG + chr7_3:80572278-80572297 None:intergenic 40.0%
!! CTACACAATGAAAGTGTTGG+AGG - chr7_3:80572276-80572295 Msa1128650:intron 40.0%
GCTGCATAATTACGGCATTT+GGG + chr7_3:80572317-80572336 None:intergenic 40.0%
AGCTGCATAATTACGGCATT+TGG + chr7_3:80572318-80572337 None:intergenic 40.0%
TGCCTCTAGCTGCATAATTA+CGG + chr7_3:80572325-80572344 None:intergenic 40.0%
! GCGTGTTAATGGACATTGTT+GGG + chr7_3:80572369-80572388 None:intergenic 40.0%
! AGCGTGTTAATGGACATTGT+TGG + chr7_3:80572370-80572389 None:intergenic 40.0%
!! GTCGCCTTCTCATTTTTCTT+CGG - chr7_3:80572595-80572614 Msa1128650:intron 40.0%
CTGTTCAGACAGAAGGTTAT+TGG - chr7_3:80572643-80572662 Msa1128650:intron 40.0%
!! CCATTTTTGACAAAGTGACC+CGG - chr7_3:80572732-80572751 Msa1128650:intron 40.0%
TATAACTCTTCCATGATGCC+GGG + chr7_3:80572753-80572772 None:intergenic 40.0%
CTATAACTCTTCCATGATGC+CGG + chr7_3:80572754-80572773 None:intergenic 40.0%
!! GTAGCAATGGCTTTAAGACA+CGG - chr7_3:80572817-80572836 Msa1128650:intron 40.0%
GATTGCAATACCTGTCACAT+TGG + chr7_3:80572979-80572998 None:intergenic 40.0%
! CTTACTACCAGAGCATCAAA+TGG - chr7_3:80573005-80573024 Msa1128650:intron 40.0%
TTCAATTCAAGAAGGCCTGT+CGG - chr7_3:80573049-80573068 Msa1128650:intron 40.0%
AAAATAGGTCAACCAACACC+AGG + chr7_3:80573203-80573222 None:intergenic 40.0%
!!! CTTTTTCAGCGCTCTTTGAA+TGG - chr7_3:80573442-80573461 Msa1128650:CDS 40.0%
! GGAACTATGTGAAAAGCATG+AGG - chr7_3:80573560-80573579 Msa1128650:CDS 40.0%
TGAGGAATAGCAATGGAAAG+TGG - chr7_3:80573578-80573597 Msa1128650:CDS 40.0%
GTTTATGCGTATTTGACACC+TGG - chr7_3:80573609-80573628 Msa1128650:CDS 40.0%
TGGAAACAACCAACAAGAAC+AGG + chr7_3:80573664-80573683 None:intergenic 40.0%
!! CGACATTAGCTAAGAGCATT+TGG - chr7_3:80573734-80573753 Msa1128650:CDS 40.0%
!!! TCTTTGTCACTTTTACACGG+TGG - chr7_3:80573809-80573828 Msa1128650:CDS 40.0%
CGGAATTACAAAAGCTGAAG+TGG - chr7_3:80573833-80573852 Msa1128650:CDS 40.0%
GGGATTATTTCCTCACTTCT+TGG - chr7_3:80573856-80573875 Msa1128650:CDS 40.0%
ATAATTGCTCCCAAGAAGTG+AGG + chr7_3:80573869-80573888 None:intergenic 40.0%
! TGGTTAAGAAGCAGTTTTCC+GGG - chr7_3:80574024-80574043 Msa1128650:CDS 40.0%
!! GAGAGGAGAGAGTATTATCA+AGG - chr7_3:80574252-80574271 Msa1128650:five_prime_UTR 40.0%
GTGATTAAGAGGGATGGAGA+GGG + chr7_3:80567934-80567953 None:intergenic 45.0%
TGTGATTAAGAGGGATGGAG+AGG + chr7_3:80567935-80567954 None:intergenic 45.0%
TTGAGGAGTGATCTACGAAG+AGG + chr7_3:80567967-80567986 None:intergenic 45.0%
TGGATTGAATGGGGCAAGAT+GGG + chr7_3:80567999-80568018 None:intergenic 45.0%
TTGGATTGAATGGGGCAAGA+TGG + chr7_3:80568000-80568019 None:intergenic 45.0%
TCTTGCCCCATTCAATCCAA+TGG - chr7_3:80568000-80568019 Msa1128650:three_prime_UTR 45.0%
ATGCCGCCATTGGATTGAAT+GGG + chr7_3:80568009-80568028 None:intergenic 45.0%
GGAAAATGCAGTGGTAGTTG+AGG + chr7_3:80568032-80568051 None:intergenic 45.0%
GAGTTTGAGGGAAAATGCAG+TGG + chr7_3:80568041-80568060 None:intergenic 45.0%
TTGAGAGGATGGGAGTTTGA+GGG + chr7_3:80568053-80568072 None:intergenic 45.0%
ATTGAGAGGATGGGAGTTTG+AGG + chr7_3:80568054-80568073 None:intergenic 45.0%
GAAATGGAGGATGAGGAGAA+TGG + chr7_3:80568088-80568107 None:intergenic 45.0%
GGATGTAGAAATGGAGGATG+AGG + chr7_3:80568095-80568114 None:intergenic 45.0%
CCATACTAGGAGAGAGATTG+AGG + chr7_3:80568173-80568192 None:intergenic 45.0%
CCTCAATCTCTCTCCTAGTA+TGG - chr7_3:80568170-80568189 Msa1128650:three_prime_UTR 45.0%
! TTCGTCTCTGCTCTTGTTGT+CGG - chr7_3:80568309-80568328 Msa1128650:three_prime_UTR 45.0%
TGGATTTGGGAATGGCCAAT+CGG - chr7_3:80568514-80568533 Msa1128650:three_prime_UTR 45.0%
! AGAACTCTTTTCCCTCCGAT+TGG + chr7_3:80568532-80568551 None:intergenic 45.0%
AAAGAGTTCTGCGGATCTTG+AGG - chr7_3:80568542-80568561 Msa1128650:three_prime_UTR 45.0%
AAGAGTTCTGCGGATCTTGA+GGG - chr7_3:80568543-80568562 Msa1128650:three_prime_UTR 45.0%
!!! GGACGCTTTTTCGTCGTAAT+AGG + chr7_3:80568580-80568599 None:intergenic 45.0%
AAACACGCTTCTGGATTTCG+TGG - chr7_3:80568618-80568637 Msa1128650:intron 45.0%
! GATCTAAAACCAAACGCTGC+AGG - chr7_3:80569168-80569187 Msa1128650:intron 45.0%
TATGGTTAACCTGCAGCGTT+TGG + chr7_3:80569180-80569199 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr7_3:80569422-80569441 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr7_3:80569445-80569464 Msa1128650:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr7_3:80569455-80569474 Msa1128650:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_3:80569601-80569620 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_3:80569602-80569621 None:intergenic 45.0%
TAGCCAGTTGATCCCTTTGT+CGG - chr7_3:80569820-80569839 Msa1128650:intron 45.0%
GGTCAGTGGTCAACGTAATT+TGG + chr7_3:80569915-80569934 None:intergenic 45.0%
AGTAGCATCAACTAGGTCAG+TGG + chr7_3:80569929-80569948 None:intergenic 45.0%
GCTTACAGATTTCCAAGGCA+TGG - chr7_3:80570210-80570229 Msa1128650:intron 45.0%
!! GGAAAAGAGTATTAGGGAGG+AGG + chr7_3:80570391-80570410 None:intergenic 45.0%
!! GAGGGAAAAGAGTATTAGGG+AGG + chr7_3:80570394-80570413 None:intergenic 45.0%
!! AGGCAAATGCTCTGCTTTTG+GGG + chr7_3:80570483-80570502 None:intergenic 45.0%
!! CAGGCAAATGCTCTGCTTTT+GGG + chr7_3:80570484-80570503 None:intergenic 45.0%
! ACAGGCAAATGCTCTGCTTT+TGG + chr7_3:80570485-80570504 None:intergenic 45.0%
! AAAAGCAGAGCATTTGCCTG+TGG - chr7_3:80570484-80570503 Msa1128650:intron 45.0%
TGAATTTCCCCATGCTAGCA+CGG + chr7_3:80570627-80570646 None:intergenic 45.0%
CTAGCATGGGGAAATTCAGT+GGG - chr7_3:80570629-80570648 Msa1128650:intron 45.0%
TAGCATGGGGAAATTCAGTG+GGG - chr7_3:80570630-80570649 Msa1128650:intron 45.0%
GATGTTGCAGTTGCTAAAGC+TGG - chr7_3:80570665-80570684 Msa1128650:three_prime_UTR 45.0%
AGTTGCTAAAGCTGGTCATC+CGG - chr7_3:80570673-80570692 Msa1128650:three_prime_UTR 45.0%
!! TGTTGGTCTTGGAACTGCTT+TGG - chr7_3:80570742-80570761 Msa1128650:three_prime_UTR 45.0%
!! GTTCCTGCTTTTAAGCCTCA+TGG - chr7_3:80570838-80570857 Msa1128650:three_prime_UTR 45.0%
!! TCCTGCTTTTAAGCCTCATG+GGG - chr7_3:80570840-80570859 Msa1128650:three_prime_UTR 45.0%
TTACTAAGAGAGACCCCATG+AGG + chr7_3:80570856-80570875 None:intergenic 45.0%
AAAACCTAGGCACTCGGAAT+CGG + chr7_3:80570889-80570908 None:intergenic 45.0%
! ATTCCGAGTGCCTAGGTTTT+GGG - chr7_3:80570889-80570908 Msa1128650:three_prime_UTR 45.0%
AGACAGAATCCCCAAAACCT+AGG + chr7_3:80570902-80570921 None:intergenic 45.0%
!! TTTTGGGGATTCTGTCTCGT+AGG - chr7_3:80570905-80570924 Msa1128650:three_prime_UTR 45.0%
!! TAGGGGATAGGGGTTAGTTA+GGG + chr7_3:80571202-80571221 None:intergenic 45.0%
!! TTAGGGGATAGGGGTTAGTT+AGG + chr7_3:80571203-80571222 None:intergenic 45.0%
! TCACGCACTCTCTGATTTGT+TGG - chr7_3:80571624-80571643 Msa1128650:CDS 45.0%
TGGTGGTATTAAGCTTGTGG+TGG - chr7_3:80571777-80571796 Msa1128650:CDS 45.0%
GGTGGTATTAAGCTTGTGGT+GGG - chr7_3:80571778-80571797 Msa1128650:CDS 45.0%
GTGGTATTAAGCTTGTGGTG+GGG - chr7_3:80571779-80571798 Msa1128650:CDS 45.0%
! TGAGTTGAGTAGCAGACATC+AGG - chr7_3:80571980-80571999 Msa1128650:intron 45.0%
AGTAGCAGACATCAGGACAT+TGG - chr7_3:80571987-80572006 Msa1128650:intron 45.0%
ACTACACATGCCATATCCCT+AGG - chr7_3:80572222-80572241 Msa1128650:intron 45.0%
GATTTAGTCCCACATTGCCT+AGG + chr7_3:80572242-80572261 None:intergenic 45.0%
TGCCGTAATTATGCAGCTAG+AGG - chr7_3:80572320-80572339 Msa1128650:intron 45.0%
TTTCTTCGGTGATGTCTGCA+TGG - chr7_3:80572609-80572628 Msa1128650:intron 45.0%
TTCTTCGGTGATGTCTGCAT+GGG - chr7_3:80572610-80572629 Msa1128650:intron 45.0%
TGTGAGTCTGTTCAGACAGA+AGG - chr7_3:80572636-80572655 Msa1128650:intron 45.0%
! CCGGGTCACTTTGTCAAAAA+TGG + chr7_3:80572735-80572754 None:intergenic 45.0%
CGGCATCATGGAAGAGTTAT+AGG - chr7_3:80572752-80572771 Msa1128650:intron 45.0%
TGTTTCAGTGAGGGTTGTGA+AGG - chr7_3:80572784-80572803 Msa1128650:intron 45.0%
!! GGCTTTAAGACACGGTATTG+TGG - chr7_3:80572825-80572844 Msa1128650:intron 45.0%
TCCTTGTTCTCCAATGTGAC+AGG - chr7_3:80572966-80572985 Msa1128650:intron 45.0%
ACCTGTCACATTGGAGAACA+AGG + chr7_3:80572970-80572989 None:intergenic 45.0%
TCAATTCAAGAAGGCCTGTC+GGG - chr7_3:80573050-80573069 Msa1128650:intron 45.0%
GAGCAGTGCAGGTATAACTT+TGG - chr7_3:80573102-80573121 Msa1128650:intron 45.0%
TGCTCTTAGCTAATGTCGTG+TGG + chr7_3:80573732-80573751 None:intergenic 45.0%
!!! TGTCACTTTTACACGGTGGT+CGG - chr7_3:80573813-80573832 Msa1128650:CDS 45.0%
CTCTCAAGCTTAGTGCTAGA+AGG - chr7_3:80574123-80574142 Msa1128650:CDS 45.0%
ATTAAGAGGGATGGAGAGGG+AGG + chr7_3:80567931-80567950 None:intergenic 50.0%
AAGATGGGGCGATGTTGTTG+AGG + chr7_3:80567984-80568003 None:intergenic 50.0%
GGATTGAATGGGGCAAGATG+GGG + chr7_3:80567998-80568017 None:intergenic 50.0%
TGCCCCATTCAATCCAATGG+CGG - chr7_3:80568003-80568022 Msa1128650:three_prime_UTR 50.0%
TGCCGCCATTGGATTGAATG+GGG + chr7_3:80568008-80568027 None:intergenic 50.0%
GATGCCGCCATTGGATTGAA+TGG + chr7_3:80568010-80568029 None:intergenic 50.0%
ATGAGGAGAATGGAGAGGGA+GGG + chr7_3:80568078-80568097 None:intergenic 50.0%
GAGGATGAGGAGAATGGAGA+GGG + chr7_3:80568082-80568101 None:intergenic 50.0%
!! GGTGAGAAGCGGTTTTGATG+AGG + chr7_3:80568116-80568135 None:intergenic 50.0%
ACACTTCTCGCTCTCGGTAA+CGG - chr7_3:80568201-80568220 Msa1128650:three_prime_UTR 50.0%
! AAGAGCAGAGACGAAAGCAC+CGG + chr7_3:80568304-80568323 None:intergenic 50.0%
! TGCTCCTTTTCCCGTTGATC+CGG - chr7_3:80568350-80568369 Msa1128650:three_prime_UTR 50.0%
ACATCTCTAACAAACGGCGC+CGG + chr7_3:80568372-80568391 None:intergenic 50.0%
ATTTGGGAATGGCCAATCGG+AGG - chr7_3:80568517-80568536 Msa1128650:three_prime_UTR 50.0%
TTTGGGAATGGCCAATCGGA+GGG - chr7_3:80568518-80568537 Msa1128650:three_prime_UTR 50.0%
TCGGAGGGAAAAGAGTTCTG+CGG - chr7_3:80568533-80568552 Msa1128650:three_prime_UTR 50.0%
CAACCAACTGAGCTAAGCTC+AGG + chr7_3:80568726-80568745 None:intergenic 50.0%
CTGAGCTTAGCTCAGTTGGT+TGG - chr7_3:80568724-80568743 Msa1128650:intron 50.0%
GCTCCAAGGCCATTGTTTCA+AGG + chr7_3:80569208-80569227 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_3:80569597-80569616 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_3:80569603-80569622 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_3:80569600-80569619 Msa1128650:intron 50.0%
CTACCGACAAAGGGATCAAC+TGG + chr7_3:80569826-80569845 None:intergenic 50.0%
AGCAGAGTATGGGATACGTC+AGG + chr7_3:80570193-80570212 None:intergenic 50.0%
!! ATTGCGATGGTGCTGGTTGA+GGG + chr7_3:80570271-80570290 None:intergenic 50.0%
CATGCATACAAGAGGGCTAG+TGG + chr7_3:80570332-80570351 None:intergenic 50.0%
TGAACACTACGGACCACAGA+GGG + chr7_3:80570412-80570431 None:intergenic 50.0%
ATGAACACTACGGACCACAG+AGG + chr7_3:80570413-80570432 None:intergenic 50.0%
!! GGCAAATGCTCTGCTTTTGG+GGG + chr7_3:80570482-80570501 None:intergenic 50.0%
GAAGCGTGCCTAAAGCTTCA+AGG + chr7_3:80570574-80570593 None:intergenic 50.0%
GTAAGACCTAGGAATGCCTG+CGG + chr7_3:80570605-80570624 None:intergenic 50.0%
ATGCTAGCACGGTAAGACCT+AGG + chr7_3:80570616-80570635 None:intergenic 50.0%
TAGGTCTTACCGTGCTAGCA+TGG - chr7_3:80570615-80570634 Msa1128650:intron 50.0%
AGGTCTTACCGTGCTAGCAT+GGG - chr7_3:80570616-80570635 Msa1128650:intron 50.0%
GCTAGCATGGGGAAATTCAG+TGG - chr7_3:80570628-80570647 Msa1128650:intron 50.0%
AGCATGGGGAAATTCAGTGG+GGG - chr7_3:80570631-80570650 Msa1128650:intron 50.0%
TAAAGCTGGTCATCCGGCAA+TGG - chr7_3:80570679-80570698 Msa1128650:three_prime_UTR 50.0%
! CATTGGTCCAGCAAAGCATC+CGG + chr7_3:80570711-80570730 None:intergenic 50.0%
ACCCCATGAGGCTTAAAAGC+AGG + chr7_3:80570844-80570863 None:intergenic 50.0%
AAACCTAGGCACTCGGAATC+GGG + chr7_3:80570888-80570907 None:intergenic 50.0%
! GATTCCGAGTGCCTAGGTTT+TGG - chr7_3:80570888-80570907 Msa1128650:three_prime_UTR 50.0%
! TTCCGAGTGCCTAGGTTTTG+GGG - chr7_3:80570890-80570909 Msa1128650:three_prime_UTR 50.0%
ATCCCCAAAACCTAGGCACT+CGG + chr7_3:80570895-80570914 None:intergenic 50.0%
! TGAGTTGAGTGTGAGAGACG+AGG + chr7_3:80571155-80571174 None:intergenic 50.0%
TGCCATATCCCTAGGCAATG+TGG - chr7_3:80572230-80572249 Msa1128650:intron 50.0%
GCCATATCCCTAGGCAATGT+GGG - chr7_3:80572231-80572250 Msa1128650:intron 50.0%
TCCCACATTGCCTAGGGATA+TGG + chr7_3:80572235-80572254 None:intergenic 50.0%
TTGTGTAGGTGTGAAGGGGA+TGG + chr7_3:80572264-80572283 None:intergenic 50.0%
! AGTGTTGGAGGCTGCAATGA+TGG - chr7_3:80572288-80572307 Msa1128650:intron 50.0%
TGGGAATTCTGCCTTCACTG+TGG + chr7_3:80572350-80572369 None:intergenic 50.0%
TCAATGACGAAGAGCAGTGC+AGG - chr7_3:80573091-80573110 Msa1128650:intron 50.0%
CACCAGGTGTAGCGTACATT+GGG + chr7_3:80573187-80573206 None:intergenic 50.0%
ACACCAGGTGTAGCGTACAT+TGG + chr7_3:80573188-80573207 None:intergenic 50.0%
ATGTACGCTACACCTGGTGT+TGG - chr7_3:80573188-80573207 Msa1128650:intron 50.0%
CAACAAGAACAGGTGCTTCC+GGG + chr7_3:80573654-80573673 None:intergenic 50.0%
CCAACAAGAACAGGTGCTTC+CGG + chr7_3:80573655-80573674 None:intergenic 50.0%
ACAATCCATTTGGCCCACCT+GGG + chr7_3:80574089-80574108 None:intergenic 50.0%
AACAATCCATTTGGCCCACC+TGG + chr7_3:80574090-80574109 None:intergenic 50.0%
!! AGGTGGGCCAAATGGATTGT+TGG - chr7_3:80574089-80574108 Msa1128650:CDS 50.0%
CTTTCTCTCCATCAGCCACT+TGG + chr7_3:80574189-80574208 None:intergenic 50.0%
GTAGTTGAGGATGCCGCCAT+TGG + chr7_3:80568019-80568038 None:intergenic 55.0%
AGGGAGGGGATTGAGAGGAT+GGG + chr7_3:80568063-80568082 None:intergenic 55.0%
TGAGGAGAATGGAGAGGGAG+GGG + chr7_3:80568077-80568096 None:intergenic 55.0%
GATGAGGAGAATGGAGAGGG+AGG + chr7_3:80568079-80568098 None:intergenic 55.0%
GGAGGATGAGGAGAATGGAG+AGG + chr7_3:80568083-80568102 None:intergenic 55.0%
! ACCGAGAGCGAGAAGTGTGA+CGG + chr7_3:80568199-80568218 None:intergenic 55.0%
GCGAGAGATGAGAAGACGTC+GGG + chr7_3:80568231-80568250 None:intergenic 55.0%
GGCGAGAGATGAGAAGACGT+CGG + chr7_3:80568232-80568251 None:intergenic 55.0%
!! GAAGCCGGTACGGTATTGAC+CGG + chr7_3:80568265-80568284 None:intergenic 55.0%
!! GGTCAATACCGTACCGGCTT+CGG - chr7_3:80568264-80568283 Msa1128650:three_prime_UTR 55.0%
! AACAAACGGCGCCGGATCAA+CGG + chr7_3:80568364-80568383 None:intergenic 55.0%
CCAACTGAGCTAAGCTCAGG+AGG + chr7_3:80568723-80568742 None:intergenic 55.0%
CCTCCTGAGCTTAGCTCAGT+TGG - chr7_3:80568720-80568739 Msa1128650:intron 55.0%
! AGTGGCTGGGGTTTGAAACC+CGG + chr7_3:80568773-80568792 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr7_3:80569589-80569608 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7_3:80569588-80569607 Msa1128650:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7_3:80569589-80569608 Msa1128650:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_3:80569595-80569614 Msa1128650:intron 55.0%
!! CATTGCGATGGTGCTGGTTG+AGG + chr7_3:80570272-80570291 None:intergenic 55.0%
CTCAACCAGCACCATCGCAA+TGG - chr7_3:80570270-80570289 Msa1128650:intron 55.0%
CTGTTCCATTGCGATGGTGC+TGG + chr7_3:80570278-80570297 None:intergenic 55.0%
! AGCAGAGCATTTGCCTGTGG+TGG - chr7_3:80570487-80570506 Msa1128650:intron 55.0%
GCATTTGCCTGTGGTGGTTG+TGG - chr7_3:80570493-80570512 Msa1128650:intron 55.0%
ATTCACGAGCTCTCCAGCTG+TGG + chr7_3:80570549-80570568 None:intergenic 55.0%
AAACTGCCGCAGGCATTCCT+AGG - chr7_3:80570596-80570615 Msa1128650:intron 55.0%
GGTCTTACCGTGCTAGCATG+GGG - chr7_3:80570617-80570636 Msa1128650:intron 55.0%
TGGTCATCCGGCAATGGCAA+TGG - chr7_3:80570685-80570704 Msa1128650:three_prime_UTR 55.0%
GTGAGAGACGAGGAGAAACC+AGG + chr7_3:80571145-80571164 None:intergenic 55.0%
GGGAGTCACGAGCAATGAGT+TGG + chr7_3:80571273-80571292 None:intergenic 55.0%
GAGTGCGTGAAAAGACCTGC+AGG + chr7_3:80571614-80571633 None:intergenic 55.0%
CTAGAGGCAGACCACAGTGA+AGG - chr7_3:80572336-80572355 Msa1128650:intron 55.0%
GACAAAGTGACCCGGCATCA+TGG - chr7_3:80572740-80572759 Msa1128650:intron 55.0%
! AGCTTGTTCTGTTGCCCGAC+AGG + chr7_3:80573067-80573086 None:intergenic 55.0%
CTCCCAATGTACGCTACACC+TGG - chr7_3:80573182-80573201 Msa1128650:intron 55.0%
GCGCTCTTTGAATGGAACCG+TGG - chr7_3:80573450-80573469 Msa1128650:CDS 55.0%
!! CCGGAAGCACCTGTTCTTGT+TGG - chr7_3:80573652-80573671 Msa1128650:CDS 55.0%
AGGACCAGTGTTAGGAACCC+AGG - chr7_3:80574069-80574088 Msa1128650:CDS 55.0%
ACCAGTGTTAGGAACCCAGG+TGG - chr7_3:80574072-80574091 Msa1128650:CDS 55.0%
CCAGTGTTAGGAACCCAGGT+GGG - chr7_3:80574073-80574092 Msa1128650:CDS 55.0%
ACTGAGTGGGGTTGTCCAAG+TGG - chr7_3:80574171-80574190 Msa1128650:CDS 55.0%
!! TATGGGTGCTGACTGCTGAG+AGG - chr7_3:80574235-80574254 Msa1128650:five_prime_UTR 55.0%
GAGGGAGGGGATTGAGAGGA+TGG + chr7_3:80568064-80568083 None:intergenic 60.0%
TGGAGAGGGAGGGGATTGAG+AGG + chr7_3:80568068-80568087 None:intergenic 60.0%
AGTGTGACGGCGGCCATACT+AGG + chr7_3:80568186-80568205 None:intergenic 60.0%
! GAGAGCGAGAAGTGTGACGG+CGG + chr7_3:80568196-80568215 None:intergenic 60.0%
GCCGTCACACTTCTCGCTCT+CGG - chr7_3:80568195-80568214 Msa1128650:three_prime_UTR 60.0%
! GTATTGACCGGCGCGAAGAG+CGG + chr7_3:80568253-80568272 None:intergenic 60.0%
! GTATAGCGCCGAAGCCGGTA+CGG + chr7_3:80568275-80568294 None:intergenic 60.0%
! GGAGAGTATAGCGCCGAAGC+CGG + chr7_3:80568280-80568299 None:intergenic 60.0%
TTCGGCGCTATACTCTCCGC+CGG - chr7_3:80568282-80568301 Msa1128650:three_prime_UTR 60.0%
!! AGCAGAGACGAAAGCACCGG+CGG + chr7_3:80568301-80568320 None:intergenic 60.0%
! ACAAACGGCGCCGGATCAAC+GGG + chr7_3:80568363-80568382 None:intergenic 60.0%
GACAGGAAGCTCCCATGCCT+TGG + chr7_3:80570225-80570244 None:intergenic 60.0%
ACGAAGGCCACAACCACCAC+AGG + chr7_3:80570503-80570522 None:intergenic 60.0%
CACGCTTCTCAAACTGCCGC+AGG - chr7_3:80570586-80570605 Msa1128650:intron 60.0%
CATCCGGCAATGGCAATGGC+CGG - chr7_3:80570689-80570708 Msa1128650:three_prime_UTR 60.0%
CATCCGGCCATTGCCATTGC+CGG + chr7_3:80570695-80570714 None:intergenic 60.0%
GCAATGGCCGGATGCTTTGC+TGG - chr7_3:80570701-80570720 Msa1128650:three_prime_UTR 60.0%
CCCACCTGGGTTCCTAACAC+TGG + chr7_3:80574076-80574095 None:intergenic 60.0%
AGGAACCCAGGTGGGCCAAA+TGG - chr7_3:80574081-80574100 Msa1128650:CDS 60.0%
GGGGTTGTCCAAGTGGCTGA+TGG - chr7_3:80574178-80574197 Msa1128650:CDS 60.0%
! CGCGCCGGTCAATACCGTAC+CGG - chr7_3:80568258-80568277 Msa1128650:three_prime_UTR 65.0%
! GGCGCCGGATCAACGGGAAA+AGG + chr7_3:80568357-80568376 None:intergenic 65.0%
GGTCCCGATTCCGAGTGCCT+AGG - chr7_3:80570882-80570901 Msa1128650:three_prime_UTR 65.0%
TCTCTCGCCGCTCTTCGCGC+CGG - chr7_3:80568243-80568262 Msa1128650:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 80567742 80574324 80567742 ID=Msa1128650;Name=Msa1128650
chr7_3 mRNA 80567742 80574324 80567742 ID=Msa1128650-mRNA-1;Parent=Msa1128650;Name=Msa1128650-mRNA-1;_AED=0.08;_eAED=0.08;_QI=120|0.66|0.75|1|0.33|0.5|4|1495|518
chr7_3 exon 80567742 80568615 80567742 ID=Msa1128650-mRNA-1:exon:23112;Parent=Msa1128650-mRNA-1
chr7_3 exon 80568954 80569125 80568954 ID=Msa1128650-mRNA-1:exon:23111;Parent=Msa1128650-mRNA-1
chr7_3 exon 80570635 80571848 80570635 ID=Msa1128650-mRNA-1:exon:23110;Parent=Msa1128650-mRNA-1
chr7_3 exon 80573413 80574324 80573413 ID=Msa1128650-mRNA-1:exon:23109;Parent=Msa1128650-mRNA-1
chr7_3 five_prime_UTR 80574205 80574324 80574205 ID=Msa1128650-mRNA-1:five_prime_utr;Parent=Msa1128650-mRNA-1
chr7_3 CDS 80573413 80574204 80573413 ID=Msa1128650-mRNA-1:cds;Parent=Msa1128650-mRNA-1
chr7_3 CDS 80571084 80571848 80571084 ID=Msa1128650-mRNA-1:cds;Parent=Msa1128650-mRNA-1
chr7_3 three_prime_UTR 80570635 80571083 80570635 ID=Msa1128650-mRNA-1:three_prime_utr;Parent=Msa1128650-mRNA-1
chr7_3 three_prime_UTR 80568954 80569125 80568954 ID=Msa1128650-mRNA-1:three_prime_utr;Parent=Msa1128650-mRNA-1
chr7_3 three_prime_UTR 80567742 80568615 80567742 ID=Msa1128650-mRNA-1:three_prime_utr;Parent=Msa1128650-mRNA-1
Gene Sequence

>Msa1128650

ATGGCTTTGAAAACCATTTCACTCTCACTAATCCTCACTCTCATTATCATCTTCTTCATCACAATTCCTCCCTCTCCATCCCTCTTAATCACAACAACTTCTCCTCTTCGTAGATCACTCCTCAACAACATCGCCCCATCTTGCCCCATTCAATCCAATGGCGGCATCCTCAACTACCACTGCATTTTCCCTCAAACTCCCATCCTCTCAATCCCCTCCCTCTCCATTCTCCTCATCCTCCATTTCTACATCCTCATCAAAACCGCTTCTCACCATTTCTCAATCGTCACAACTAAACTCGCTTCTCACCTCAATCTCTCTCCTAGTATGGCCGCCGTCACACTTCTCGCTCTCGGTAACGGCTCTCCCGACGTCTTCTCATCTCTCGCCGCTCTTCGCGCCGGTCAATACCGTACCGGCTTCGGCGCTATACTCTCCGCCGGTGCTTTCGTCTCTGCTCTTGTTGTCGGCTTTGTCGCGATCTACGCTGCTCCTTTTCCCGTTGATCCGGCGCCGTTTGTTAGAGATGTGTTGTTCTACTTAACTGCTGCTATGTTTCTGTTTTATGTTTATCTTAGTGCTGAGATTTTTCTATGGCAAGCCGTTGGATTCGTTGCGTTCTATCTTTTCTTTGTTGGTTTTGTGTTTTACATGGATTTGGGAATGGCCAATCGGAGGGAAAAGAGTTCTGCGGATCTTGAGGGACAAATTGATTCCTATTACGACGAAAAAGCGTCCGGATCTGTAGAAAAAGATAAACACGCTTCTGGATTTCGTGGATCTTTTGGTTCGATTTCCAAGGCATGGGAGCTTCCTGTCTCAACCCTCTTAAGATTGACAATCCCTCAACCAGCACCATCGCAATGGAACAGATTTTATGCATCGGCCAATATCGCTCTTTGTCCACTAGCCCTCTTGTATGCATGTAACTCATTCGTGCCACTTAATCATCCCATAGTTTTCCTCCTCCCTAATACTCTTTTCCCTCTGTGGTCCGTAGTGTTCATGACAAGCTTCTCTCTTGCATTTCTCCATTTTGTATTGGAAAAAGAACCCCCAAAAGCAGAGCATTTGCCTGTGGTGGTTGTGGCCTTCGTTATGAGTGTGTTTTGGATATCTACCACAGCTGGAGAGCTCGTGAATTGCCTTGAAGCTTTAGGCACGCTTCTCAAACTGCCGCAGGCATTCCTAGGTCTTACCGTGCTAGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCGGCAATGGCAATGGCCGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTTGGTCTTGGAACTGCTTTGGTCATACAGACGACAAATATATATCCTAAAGCCTATGAACTTAATTTCCACGTTGGTATAGTGATTGCATTTGTGTTCCTGCTTTTAAGCCTCATGGGGTCTCTCTTAGTAATCACTTGGTCCCGATTCCGAGTGCCTAGGTTTTGGGGATTCTGTCTCGTAGGCCTCTATATTGTTTTTATGGCAGCGAGTTCAGCAGTAGCCATCTTTTCAAGTTGA
Protein sequence

>Msa1128650

MALKTISLSLILTLIIIFFITIPPSPSLLITTTSPLRRSLLNNIAPSCPIQSNGGILNYHCIFPQTPILSIPSLSILLILHFYILIKTASHHFSIVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGMANRREKSSADLEGQIDSYYDEKASGSVEKDKHASGFRGSFGSISKAWELPVSTLLRLTIPQPAPSQWNRFYASANIALCPLALLYACNSFVPLNHPIVFLLPNTLFPLWSVVFMTSFSLAFLHFVLEKEPPKAEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKLPQAFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTTNIYPKAYELNFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGFCLVGLYIVFMAASSAVAIFSS*