Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520670 | XP_003603241.2 | 98.932 | 562 | 6 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520670 | sp|Q67ZE1|HSDD2_ARATH | 68.873 | 559 | 172 | 1 | 2 | 560 | 5 | 561 | 0.0 | 821 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520670 | G7J951 | 98.932 | 562 | 6 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1149 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0203080 | Msa0520670 | 0.801861 | 7.373455e-49 | -8.615850e-47 |
| Msa0413170 | Msa0520670 | 0.810599 | 1.063695e-50 | -8.615850e-47 |
| Msa0421750 | Msa0520670 | 0.803396 | 3.555814e-49 | -8.615850e-47 |
| Msa0267380 | Msa0520670 | 0.801444 | 8.978104e-49 | -8.615850e-47 |
| Msa0504720 | Msa0520670 | 0.810026 | 1.414165e-50 | -8.615850e-47 |
| Msa0520670 | Msa0532050 | 0.802089 | 6.619474e-49 | -8.615850e-47 |
| Msa0520670 | Msa0532160 | 0.822570 | 2.206978e-53 | -8.615850e-47 |
| Msa0520670 | Msa0545920 | 0.810404 | 1.172374e-50 | -8.615850e-47 |
| Msa0520670 | Msa0567610 | 0.833372 | 5.538766e-56 | -8.615850e-47 |
| Msa0520670 | Msa0601720 | 0.803901 | 2.793726e-49 | -8.615850e-47 |
| Msa0520670 | Msa0607800 | 0.807586 | 4.702823e-50 | -8.615850e-47 |
| Msa0520670 | Msa0648040 | 0.811496 | 6.800697e-51 | -8.615850e-47 |
| Msa0520670 | Msa0681050 | 0.811720 | 6.079327e-51 | -8.615850e-47 |
| Msa0520670 | Msa0690740 | 0.817229 | 3.675415e-52 | -8.615850e-47 |
| Msa0520670 | Msa0719270 | 0.806262 | 8.959524e-50 | -8.615850e-47 |
| Msa0520670 | Msa0758650 | 0.805376 | 1.375595e-49 | -8.615850e-47 |
| Msa0520670 | Msa0840520 | 0.802078 | 6.653703e-49 | -8.615850e-47 |
| Msa0520670 | Msa0863620 | 0.806726 | 7.152598e-50 | -8.615850e-47 |
| Msa0520670 | Msa1019200 | 0.812847 | 3.449814e-51 | -8.615850e-47 |
| Msa0520670 | Msa1050260 | 0.821968 | 3.045080e-53 | -8.615850e-47 |
| Msa0520670 | Msa1147700 | 0.808939 | 2.420321e-50 | -8.615850e-47 |
| Msa0520670 | Msa1201780 | 0.810064 | 1.388038e-50 | -8.615850e-47 |
| Msa0520670 | Msa1206040 | 0.801471 | 8.865519e-49 | -8.615850e-47 |
| Msa0520670 | Msa1213830 | 0.825373 | 4.856318e-54 | -8.615850e-47 |
| Msa0520670 | Msa1214350 | 0.806989 | 6.291664e-50 | -8.615850e-47 |
| Msa0520670 | Msa1252790 | 0.812328 | 4.479939e-51 | -8.615850e-47 |
| Msa0520670 | Msa1279120 | 0.818467 | 1.930786e-52 | -8.615850e-47 |
| Msa0520670 | Msa1300460 | 0.834332 | 3.186061e-56 | -8.615850e-47 |
| Msa0520670 | Msa1305250 | 0.802588 | 5.225342e-49 | -8.615850e-47 |
| Msa0520670 | Msa1328870 | 0.800831 | 1.198140e-48 | -8.615850e-47 |
| Msa0520670 | Msa1365500 | 0.802596 | 5.203517e-49 | -8.615850e-47 |
| Msa0520670 | Msa1366150 | 0.800366 | 1.490580e-48 | -8.615850e-47 |
| Msa0520670 | Msa1407840 | 0.816273 | 6.020785e-52 | -8.615850e-47 |
| Msa0520670 | Msa1436620 | 0.800472 | 1.418342e-48 | -8.615850e-47 |
| Msa0520670 | Msa1437810 | 0.816064 | 6.704631e-52 | -8.615850e-47 |
| Msa0520670 | Msa1454500 | 0.820041 | 8.456796e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520670 | MtrunA17_Chr3g0136511 | 98.932 | 562 | 6 | 0 | 1 | 562 | 1 | 562 | 0.0 | 1149 |
| Msa0520670 | MtrunA17_Chr4g0033711 | 42.453 | 530 | 290 | 7 | 9 | 537 | 16 | 531 | 9.21e-132 | 396 |
| Msa0520670 | MtrunA17_Chr1g0157471 | 33.681 | 383 | 219 | 11 | 10 | 372 | 15 | 382 | 3.43e-47 | 171 |
| Msa0520670 | MtrunA17_Chr3g0133771 | 26.724 | 348 | 220 | 13 | 10 | 352 | 5 | 322 | 1.60e-19 | 90.1 |
| Msa0520670 | MtrunA17_Chr2g0314601 | 30.204 | 245 | 146 | 9 | 1 | 231 | 1 | 234 | 5.03e-16 | 81.6 |
| Msa0520670 | MtrunA17_Chr8g0359401 | 29.388 | 245 | 148 | 9 | 1 | 231 | 1 | 234 | 1.39e-15 | 80.1 |
| Msa0520670 | MtrunA17_Chr8g0348131 | 33.333 | 177 | 96 | 5 | 368 | 535 | 65 | 228 | 2.11e-13 | 70.9 |
| Msa0520670 | MtrunA17_Chr4g0005701 | 30.319 | 188 | 115 | 4 | 378 | 558 | 18 | 196 | 2.57e-12 | 66.2 |
| Msa0520670 | MtrunA17_Chr8g0387631 | 30.851 | 188 | 103 | 5 | 378 | 556 | 69 | 238 | 3.01e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520670 | AT2G26260.1 | 68.873 | 559 | 172 | 1 | 2 | 560 | 5 | 561 | 0.0 | 821 |
| Msa0520670 | AT2G26260.2 | 69.492 | 472 | 142 | 1 | 89 | 560 | 1 | 470 | 0.0 | 697 |
| Msa0520670 | AT1G47290.2 | 67.338 | 447 | 126 | 3 | 6 | 449 | 9 | 438 | 0.0 | 637 |
| Msa0520670 | AT1G47290.1 | 74.451 | 364 | 93 | 0 | 6 | 369 | 9 | 372 | 0.0 | 594 |
| Msa0520670 | AT2G43420.1 | 40.614 | 554 | 311 | 7 | 9 | 555 | 15 | 557 | 6.86e-138 | 412 |
| Msa0520670 | AT2G33630.1 | 31.759 | 381 | 227 | 9 | 10 | 372 | 15 | 380 | 1.23e-42 | 159 |
| Msa0520670 | AT4G33360.1 | 26.230 | 366 | 212 | 15 | 10 | 360 | 16 | 338 | 2.75e-17 | 84.0 |
| Msa0520670 | AT4G33360.3 | 25.762 | 361 | 213 | 14 | 10 | 355 | 4 | 324 | 3.95e-17 | 83.2 |
| Msa0520670 | AT1G53500.1 | 29.661 | 236 | 141 | 9 | 10 | 231 | 12 | 236 | 2.75e-15 | 79.7 |
| Msa0520670 | AT3G14790.2 | 29.388 | 245 | 148 | 9 | 1 | 231 | 4 | 237 | 6.14e-15 | 78.6 |
| Msa0520670 | AT3G14790.1 | 29.388 | 245 | 148 | 9 | 1 | 231 | 1 | 234 | 7.41e-15 | 78.2 |
| Msa0520670 | AT4G33360.2 | 25.680 | 331 | 182 | 14 | 5 | 315 | 11 | 297 | 1.32e-12 | 69.3 |
| Msa0520670 | AT4G11220.1 | 29.255 | 188 | 106 | 5 | 378 | 556 | 80 | 249 | 3.88e-12 | 67.4 |
| Msa0520670 | AT3G61560.1 | 30.622 | 209 | 119 | 7 | 367 | 552 | 38 | 243 | 2.33e-11 | 64.7 |
| Msa0520670 | AT3G61560.2 | 30.622 | 209 | 119 | 7 | 367 | 552 | 38 | 243 | 2.33e-11 | 64.7 |
Find 180 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTGCAGAAGGGAATAAT+TGG | 0.171596 | 3_4:-73202269 | Msa0520670:CDS |
| CTTTGAAGTAACAAACTTCT+TGG | 0.203034 | 3_4:+73201859 | None:intergenic |
| TGCCGATGCCCTTGCTTATA+TGG | 0.210050 | 3_4:-73201503 | Msa0520670:three_prime_UTR |
| GGCATATTTCATTACGAATA+TGG | 0.231821 | 3_4:-73205216 | Msa0520670:CDS |
| TCTGCTCGTTCTTAGCTTCC+TGG | 0.240047 | 3_4:-73202121 | Msa0520670:CDS |
| ATGAACTCCCAAAACTTTAT+AGG | 0.247483 | 3_4:+73205191 | None:intergenic |
| GGAGTTCATGTCTCTAATTT+TGG | 0.253874 | 3_4:-73205177 | Msa0520670:CDS |
| TTCCAGACTGCATTTGATTA+TGG | 0.254715 | 3_4:-73207284 | Msa0520670:exon |
| AACAAACCTCAACTCTTAAA+AGG | 0.261492 | 3_4:-73207052 | Msa0520670:intron |
| TATGACCCATGTCATGTTAC+AGG | 0.265492 | 3_4:+73201341 | None:intergenic |
| ATATGGAACCTATAAAGTTT+TGG | 0.301633 | 3_4:-73205199 | Msa0520670:CDS |
| CTTTCTCAGTTGCCTCATCT+TGG | 0.333806 | 3_4:-73202317 | Msa0520670:CDS |
| CTGTGTCCGCATCGCCGATT+TGG | 0.334227 | 3_4:-73207170 | Msa0520670:CDS |
| TAGTTGTTTATAGAAGAATT+TGG | 0.351116 | 3_4:+73206917 | None:intergenic |
| GGATTGGTTATTAAGGCTAA+TGG | 0.351234 | 3_4:-73206422 | Msa0520670:CDS |
| GGGTGAGGGATTGGTTATTA+AGG | 0.352725 | 3_4:-73206429 | Msa0520670:CDS |
| CTTGAACCCTCTGAGCAATT+AGG | 0.355569 | 3_4:-73207133 | Msa0520670:CDS |
| AAAGATATCGCAGCCGTAAA+TGG | 0.359984 | 3_4:+73207421 | None:intergenic |
| TTCTCTTACCAGTTCATTGT+TGG | 0.367722 | 3_4:-73206006 | Msa0520670:intron |
| GCCGATGCCCTTGCTTATAT+GGG | 0.368385 | 3_4:-73201502 | Msa0520670:three_prime_UTR |
| TATCATGCCAATTGCACATT+TGG | 0.370214 | 3_4:-73204090 | Msa0520670:CDS |
| ACCTGGGAAGCTATTTAGAT+TGG | 0.370608 | 3_4:-73201567 | Msa0520670:three_prime_UTR |
| GACGGTTCCATCACCATTTA+CGG | 0.371919 | 3_4:-73207434 | Msa0520670:five_prime_UTR |
| CTTAAGAACTTGTATACTAT+AGG | 0.373557 | 3_4:-73202087 | Msa0520670:intron |
| ACTCCTATCGGGAATTTAAT+CGG | 0.378975 | 3_4:-73201528 | Msa0520670:three_prime_UTR |
| TTAATCTCTGCAGCATTTGA+AGG | 0.382000 | 3_4:-73206968 | Msa0520670:intron |
| TCGATCGGTTTATTCATTCA+TGG | 0.385542 | 3_4:-73202761 | Msa0520670:CDS |
| GGAATTCATGGAATTCATAA+TGG | 0.386447 | 3_4:-73206705 | Msa0520670:CDS |
| TTACTTCAAAGATTGATTGA+TGG | 0.390041 | 3_4:-73201847 | Msa0520670:exon |
| TGCTTCACCTTCAACATTGA+CGG | 0.391665 | 3_4:+73206880 | None:intergenic |
| TATAGGCTGCTTGGCCCATA+TGG | 0.393052 | 3_4:-73204056 | Msa0520670:CDS |
| TCCAAAGCTTCTGTATATCT+TGG | 0.393295 | 3_4:-73203475 | Msa0520670:CDS |
| TTAAAATTTGTCACTCCTAT+CGG | 0.395432 | 3_4:-73201540 | Msa0520670:three_prime_UTR |
| CAATAATTGTACAATGATAC+AGG | 0.395876 | 3_4:+73201744 | None:intergenic |
| ATCCACGTCCTACCTTCTTC+TGG | 0.396784 | 3_4:-73207337 | Msa0520670:five_prime_UTR |
| TCCAAGATATACAGAAGCTT+TGG | 0.397177 | 3_4:+73203474 | None:intergenic |
| CACTCCACCAAATGTGCAAT+TGG | 0.401026 | 3_4:+73204083 | None:intergenic |
| GTGAAACAGATTAGAGCAAT+TGG | 0.405052 | 3_4:+73207515 | None:intergenic |
| TGAGGCACCTTCATTCCATA+TGG | 0.412154 | 3_4:+73204041 | None:intergenic |
| GATGTGAGTCTTATTCTTGA+AGG | 0.416433 | 3_4:+73204011 | None:intergenic |
| CATCATTCCGTCAATGTTGA+AGG | 0.420093 | 3_4:-73206887 | Msa0520670:intron |
| CATGCCAATTGCACATTTGG+TGG | 0.425591 | 3_4:-73204087 | Msa0520670:CDS |
| TGTGTCCGCATCGCCGATTT+GGG | 0.426692 | 3_4:-73207169 | Msa0520670:CDS |
| TAAACTGTTGGTGCCTTCAT+TGG | 0.429069 | 3_4:-73206342 | Msa0520670:CDS |
| TCTGAGCAATTAGGTCTTCT+CGG | 0.432974 | 3_4:-73207124 | Msa0520670:CDS |
| GATTGGTTATTAAGGCTAAT+GGG | 0.435448 | 3_4:-73206421 | Msa0520670:CDS |
| ATGTGATTGGTGATAATCTT+TGG | 0.437500 | 3_4:-73201479 | Msa0520670:three_prime_UTR |
| TTGGTTGATGCTGCAAAGGC+AGG | 0.438220 | 3_4:-73206323 | Msa0520670:CDS |
| CTCAGAGGGTTCAAGTTCAA+TGG | 0.441397 | 3_4:+73207141 | None:intergenic |
| AAGAATTTGGAGCAGCCATA+TGG | 0.444848 | 3_4:+73206930 | None:intergenic |
| ATCGTTGCCTTATCCACCTT+CGG | 0.448632 | 3_4:-73206676 | Msa0520670:intron |
| ATTTGGTGGAGTGGATATAT+AGG | 0.449440 | 3_4:-73204073 | Msa0520670:CDS |
| CAGAACCTGTAGAGGTATGA+TGG | 0.450369 | 3_4:+73203935 | None:intergenic |
| TAAAATTTGTCACTCCTATC+GGG | 0.453788 | 3_4:-73201539 | Msa0520670:three_prime_UTR |
| AGCAGCAAAGCCTCGTCCTC+CGG | 0.454833 | 3_4:+73207231 | None:intergenic |
| CTGCTCGTTCTTAGCTTCCT+GGG | 0.460258 | 3_4:-73202120 | Msa0520670:CDS |
| ATACAAGTTCTTAAGTGAAA+AGG | 0.460456 | 3_4:+73202095 | None:intergenic |
| CCTGGGAAGCTATTTAGATT+GGG | 0.461171 | 3_4:-73201566 | Msa0520670:three_prime_UTR |
| CGGACACACACGAAATAGTA+AGG | 0.463881 | 3_4:+73207458 | None:intergenic |
| TACCAGTTCATTGTTGGTGA+TGG | 0.464034 | 3_4:-73206000 | Msa0520670:intron |
| TTCAATGGTGGATCCCAAAT+CGG | 0.464651 | 3_4:+73207156 | None:intergenic |
| AAAGAGAGCTTAAAATGTTG+TGG | 0.465718 | 3_4:-73201609 | Msa0520670:three_prime_UTR |
| TAAAGCCGAGGGTGAGGGAT+TGG | 0.474854 | 3_4:-73206438 | Msa0520670:CDS |
| TTTGATTATGGCGGCGGCGG+AGG | 0.475500 | 3_4:-73207272 | Msa0520670:exon |
| GTAGGTACCGAAGGTGGATA+AGG | 0.477922 | 3_4:+73206669 | None:intergenic |
| CCCAATCTAAATAGCTTCCC+AGG | 0.481548 | 3_4:+73201566 | None:intergenic |
| GTATATCTTGGAAGTGGAAG+AGG | 0.485555 | 3_4:-73203463 | Msa0520670:intron |
| CAGTTGCTGACACGTTGCTT+TGG | 0.485790 | 3_4:-73202898 | Msa0520670:CDS |
| CGCCATAATCAAATGCAGTC+TGG | 0.486266 | 3_4:+73207282 | None:intergenic |
| GCGATATCTTTCCTCACAAA+AGG | 0.490477 | 3_4:-73207409 | Msa0520670:five_prime_UTR |
| AGCAACTAAAGCCGAGGGTG+AGG | 0.494138 | 3_4:-73206444 | Msa0520670:CDS |
| TTGCTTATATGGGATGTGAT+TGG | 0.498625 | 3_4:-73201492 | Msa0520670:three_prime_UTR |
| CTTAAAATGTTGTGGGTTGG+AGG | 0.501325 | 3_4:-73201601 | Msa0520670:three_prime_UTR |
| AGGTTTGTTGCGAAGATCGA+CGG | 0.502657 | 3_4:+73207066 | None:intergenic |
| TTATAAAATAAGAAATGTCA+TGG | 0.504092 | 3_4:+73201225 | None:intergenic |
| TGCACCCATCATACCTCTAC+AGG | 0.507092 | 3_4:-73203940 | Msa0520670:intron |
| GCATTTGATTATGGCGGCGG+CGG | 0.508585 | 3_4:-73207275 | Msa0520670:exon |
| GAAAGGTGGTGTGTGGTCAC+CGG | 0.510184 | 3_4:-73207250 | Msa0520670:CDS |
| AAGATATACAGAAGCTTTGG+AGG | 0.510237 | 3_4:+73203477 | None:intergenic |
| TCGAATCATATCCACATTTG+AGG | 0.511233 | 3_4:-73203534 | Msa0520670:CDS |
| GAGCTTAAAATGTTGTGGGT+TGG | 0.511327 | 3_4:-73201604 | Msa0520670:three_prime_UTR |
| TGCTGACACGTTGCTTTGGA+AGG | 0.511938 | 3_4:-73202894 | Msa0520670:CDS |
| TGTGTGGTCACCGGAGGACG+AGG | 0.512379 | 3_4:-73207241 | Msa0520670:CDS |
| AAGAGAGCTTAAAATGTTGT+GGG | 0.515659 | 3_4:-73201608 | Msa0520670:three_prime_UTR |
| ATGTGAGTCTTATTCTTGAA+GGG | 0.515692 | 3_4:+73204012 | None:intergenic |
| GCTTCTGTATATCTTGGAAG+TGG | 0.518379 | 3_4:-73203469 | Msa0520670:CDS |
| TTGAGAAAATGCCCACATCA+TGG | 0.518767 | 3_4:-73202374 | Msa0520670:CDS |
| GCAACTAAAGCCGAGGGTGA+GGG | 0.520116 | 3_4:-73206443 | Msa0520670:CDS |
| TTTGCAGCATCAACCAATGA+AGG | 0.520481 | 3_4:+73206329 | None:intergenic |
| TGCAGCATTTGAAGGAGTTG+AGG | 0.521031 | 3_4:-73206960 | Msa0520670:intron |
| CCAATTATTCCCTTCTGCAA+GGG | 0.522767 | 3_4:+73202269 | None:intergenic |
| CCCAATTATTCCCTTCTGCA+AGG | 0.526936 | 3_4:+73202268 | None:intergenic |
| ACTGCATTTGATTATGGCGG+CGG | 0.527486 | 3_4:-73207278 | Msa0520670:exon |
| GAGCTCGATCAGCACATATG+TGG | 0.527742 | 3_4:+73205932 | None:intergenic |
| TGGAGGTTGATTGATAAACC+TGG | 0.528757 | 3_4:-73201584 | Msa0520670:three_prime_UTR |
| TGGAAGGTCTTGGATATCAA+AGG | 0.529691 | 3_4:-73205157 | Msa0520670:intron |
| CCTTGCAGAAGGGAATAATT+GGG | 0.540074 | 3_4:-73202268 | Msa0520670:CDS |
| TTATGGCGGCGGCGGAGGAA+AGG | 0.542684 | 3_4:-73207267 | Msa0520670:CDS |
| TGGCGGCGGCGGAGGAAAGG+TGG | 0.543511 | 3_4:-73207264 | Msa0520670:CDS |
| GCGCCGCTGAAGCTTGCAGT+TGG | 0.544289 | 3_4:+73207361 | None:intergenic |
| CGAATCATATCCACATTTGA+GGG | 0.546936 | 3_4:-73203533 | Msa0520670:CDS |
| CTTCTATTATACTCATCGAT+CGG | 0.547051 | 3_4:-73202776 | Msa0520670:CDS |
| CAGACTGCATTTGATTATGG+CGG | 0.547350 | 3_4:-73207281 | Msa0520670:exon |
| TTGAGCAAACATGACTCAAA+GGG | 0.547821 | 3_4:+73201453 | None:intergenic |
| CATCTTCATTTAATCCACGT+TGG | 0.548065 | 3_4:-73201772 | Msa0520670:three_prime_UTR |
| TTCATTGGTTGATGCTGCAA+AGG | 0.548711 | 3_4:-73206327 | Msa0520670:CDS |
| TAGGGCGTATGCAACATGTC+AGG | 0.552269 | 3_4:+73206387 | None:intergenic |
| ATTGGCATGATAACAAAGAC+AGG | 0.553368 | 3_4:+73204101 | None:intergenic |
| GTAGAAAGCTGTAAATGCTA+AGG | 0.553726 | 3_4:+73201964 | None:intergenic |
| GAGTGGATATATAGGCTGCT+TGG | 0.554338 | 3_4:-73204065 | Msa0520670:CDS |
| GGACACAGTAGGTGTTCAAT+CGG | 0.555516 | 3_4:+73207185 | None:intergenic |
| AAGACAGGGATCTTTATGCT+TGG | 0.556912 | 3_4:+73204116 | None:intergenic |
| GCAGTCTGGAAGGTTAGTTA+TGG | 0.557136 | 3_4:+73207296 | None:intergenic |
| TGTAAACTTGCTCGGAGTAG+AGG | 0.558240 | 3_4:-73201676 | Msa0520670:three_prime_UTR |
| CTTTGTAAGAGCAGTAATGA+AGG | 0.563257 | 3_4:+73202799 | None:intergenic |
| ATCGCAGCCGTAAATGGTGA+TGG | 0.564493 | 3_4:+73207427 | None:intergenic |
| TCTTAAGTGAAAAGGCTCCC+AGG | 0.566172 | 3_4:+73202103 | None:intergenic |
| CAACTTAAGTCTAAAAGAGA+AGG | 0.566200 | 3_4:-73203502 | Msa0520670:CDS |
| TATTTCGTGTGTGTCCGCGA+CGG | 0.567481 | 3_4:-73207452 | Msa0520670:five_prime_UTR |
| GCATTAAAATCCCTTGCAGA+AGG | 0.567802 | 3_4:-73202279 | Msa0520670:CDS |
| TGGACCTGGTGATAAACTGT+TGG | 0.573810 | 3_4:-73206354 | Msa0520670:CDS |
| GCTTGGCCCATATGGAATGA+AGG | 0.577124 | 3_4:-73204048 | Msa0520670:CDS |
| TTTCACATATGTTGAAAATG+TGG | 0.577379 | 3_4:-73205962 | Msa0520670:CDS |
| TCAAAACCTGTAACATGACA+TGG | 0.578204 | 3_4:-73201347 | Msa0520670:three_prime_UTR |
| GAGGCACCTTCATTCCATAT+GGG | 0.580167 | 3_4:+73204042 | None:intergenic |
| TTTGAGCAAACATGACTCAA+AGG | 0.583039 | 3_4:+73201452 | None:intergenic |
| AGAAGACCTAATTGCTCAGA+GGG | 0.584128 | 3_4:+73207127 | None:intergenic |
| TGATTGGTGATAATCTTTGG+CGG | 0.587522 | 3_4:-73201476 | Msa0520670:three_prime_UTR |
| GGCGGAGGAAAGGTGGTGTG+TGG | 0.587912 | 3_4:-73207257 | Msa0520670:CDS |
| CACAGCAAAATTCCAAGATG+AGG | 0.589243 | 3_4:+73202305 | None:intergenic |
| GAGTCACGGACACCAGAAGA+AGG | 0.589394 | 3_4:+73207325 | None:intergenic |
| CACCAGAAGAAGGTAGGACG+TGG | 0.590124 | 3_4:+73207335 | None:intergenic |
| TGATCGAGCTCTAGCTTCAG+AGG | 0.590757 | 3_4:-73205920 | Msa0520670:CDS |
| TGTGAGTCTTATTCTTGAAG+GGG | 0.592528 | 3_4:+73204013 | None:intergenic |
| CATTAAAATCCCTTGCAGAA+GGG | 0.592814 | 3_4:-73202278 | Msa0520670:CDS |
| AGAACCTGTAGAGGTATGAT+GGG | 0.594321 | 3_4:+73203936 | None:intergenic |
| TCCCATATAAGCAAGGGCAT+CGG | 0.596230 | 3_4:+73201501 | None:intergenic |
| AGCTCGATCAGCACATATGT+GGG | 0.596317 | 3_4:+73205933 | None:intergenic |
| GGAGGTTGATTGATAAACCT+GGG | 0.598447 | 3_4:-73201583 | Msa0520670:three_prime_UTR |
| TCACCAACTGCAAGCTTCAG+CGG | 0.598640 | 3_4:-73207364 | Msa0520670:five_prime_UTR |
| GTATGATGGGTGCATAGTCA+AGG | 0.599231 | 3_4:+73203949 | None:intergenic |
| CATTGACGGAATGATGAAGC+TGG | 0.600987 | 3_4:+73206894 | None:intergenic |
| GGAGACATATTGAGCACGAC+CGG | 0.604728 | 3_4:+73207087 | None:intergenic |
| AATAACCAATCCCTCACCCT+CGG | 0.605731 | 3_4:+73206433 | None:intergenic |
| TTACTCAGCAACTAAAGCCG+AGG | 0.607635 | 3_4:-73206450 | Msa0520670:CDS |
| ATTCTTGAAGGGGTCAGCTG+AGG | 0.610389 | 3_4:+73204023 | None:intergenic |
| ATAATCAAATGCAGTCTGGA+AGG | 0.612641 | 3_4:+73207286 | None:intergenic |
| AGGTGGTGTGTGGTCACCGG+AGG | 0.612663 | 3_4:-73207247 | Msa0520670:CDS |
| TGGTTGATGCTGCAAAGGCA+GGG | 0.613832 | 3_4:-73206322 | Msa0520670:CDS |
| CTCGGTCAAGCTTTACACTC+CGG | 0.614278 | 3_4:-73207106 | Msa0520670:CDS |
| AATCACATCCCATATAAGCA+AGG | 0.615558 | 3_4:+73201494 | None:intergenic |
| ATTAAGGCTAATGGGACTAG+TGG | 0.621571 | 3_4:-73206413 | Msa0520670:CDS |
| GAGAAGACCTAATTGCTCAG+AGG | 0.625054 | 3_4:+73207126 | None:intergenic |
| ATCACATCCCATATAAGCAA+GGG | 0.625681 | 3_4:+73201495 | None:intergenic |
| TGGCAAAGGCTCCTTTGAGT+CGG | 0.625999 | 3_4:-73201375 | Msa0520670:three_prime_UTR |
| CAATTGCACATTTGGTGGAG+TGG | 0.628998 | 3_4:-73204082 | Msa0520670:CDS |
| AGAGGGTTCAAGTTCAATGG+TGG | 0.630912 | 3_4:+73207144 | None:intergenic |
| AAACCGATTAAATTCCCGAT+AGG | 0.632453 | 3_4:+73201525 | None:intergenic |
| GGCACCAACAGTTTATCACC+AGG | 0.633574 | 3_4:+73206350 | None:intergenic |
| TACTCAGCAACTAAAGCCGA+GGG | 0.636180 | 3_4:-73206449 | Msa0520670:CDS |
| GATCGAGCTCTAGCTTCAGA+GGG | 0.640107 | 3_4:-73205919 | Msa0520670:CDS |
| GGTAAAGTAGGTACCGAAGG+TGG | 0.641463 | 3_4:+73206663 | None:intergenic |
| AAAGGCGACTGTCGTCGCAA+CGG | 0.646567 | 3_4:-73207391 | Msa0520670:five_prime_UTR |
| AAACGTCACAGAACCTGTAG+AGG | 0.648903 | 3_4:+73203927 | None:intergenic |
| TGATAAGTGAAACCATGATG+TGG | 0.662199 | 3_4:+73202362 | None:intergenic |
| AGATATACAGAAGCTTTGGA+GGG | 0.663079 | 3_4:+73203478 | None:intergenic |
| ATCGGCGATGCGGACACAGT+AGG | 0.665728 | 3_4:+73207174 | None:intergenic |
| GGACACACACGAAATAGTAA+GGG | 0.670090 | 3_4:+73207459 | None:intergenic |
| CACGGACACCAGAAGAAGGT+AGG | 0.670228 | 3_4:+73207329 | None:intergenic |
| AGTTATGGATCACAGAGTCA+CGG | 0.675946 | 3_4:+73207311 | None:intergenic |
| TGCAAAGGCAGGGAAATCCA+AGG | 0.678227 | 3_4:-73206312 | Msa0520670:intron |
| TGGATCCCAAATCGGCGATG+CGG | 0.678949 | 3_4:+73207164 | None:intergenic |
| GATAAGTGAAACCATGATGT+GGG | 0.683459 | 3_4:+73202363 | None:intergenic |
| CAAAACCTGTAACATGACAT+GGG | 0.684151 | 3_4:-73201346 | Msa0520670:three_prime_UTR |
| AATAATTGTACAATGATACA+GGG | 0.693390 | 3_4:+73201745 | None:intergenic |
| TCTTGCAGGAGGGCATACGG+AGG | 0.702619 | 3_4:-73203561 | Msa0520670:intron |
| AAATGGTGATGGAACCGTCG+CGG | 0.723389 | 3_4:+73207438 | None:intergenic |
| TTGGCATGATAACAAAGACA+GGG | 0.735805 | 3_4:+73204102 | None:intergenic |
| TGATGGGTGCATAGTCAAGG+CGG | 0.737283 | 3_4:+73203952 | None:intergenic |
| TGATACAGGGAATTCCAACG+TGG | 0.825223 | 3_4:+73201758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTATTTTTTTAATGAAATA+AGG | - | chr3_4:73204504-73204523 | Msa0520670:intron | 10.0% |
| !!! | TATGTTTATATTAGTTTATT+TGG | + | chr3_4:73204551-73204570 | None:intergenic | 10.0% |
| !! | AACTAATATAAACATAATTA+TGG | - | chr3_4:73204555-73204574 | Msa0520670:intron | 10.0% |
| !! | TATTAAAAAAAAAAAAACGT+TGG | - | chr3_4:73205474-73205493 | Msa0520670:intron | 10.0% |
| !! | TATGTATATTATCTTTAAAT+AGG | + | chr3_4:73206179-73206198 | None:intergenic | 10.0% |
| !! | ATATAATTTAATCTAGCTAT+TGG | - | chr3_4:73202199-73202218 | Msa0520670:intron | 15.0% |
| !! | TATAATTTAATCTAGCTATT+GGG | - | chr3_4:73202200-73202219 | Msa0520670:intron | 15.0% |
| !! | ATAAATCATCAATTAAAGAA+AGG | + | chr3_4:73202711-73202730 | None:intergenic | 15.0% |
| !! | AAACAATGTTAATATGTTAA+AGG | - | chr3_4:73203048-73203067 | Msa0520670:intron | 15.0% |
| !!! | TTTAATTTCATTTTTTGCTT+AGG | + | chr3_4:73203803-73203822 | None:intergenic | 15.0% |
| !!! | TTTTTAAAATCACATACTTT+TGG | - | chr3_4:73206836-73206855 | Msa0520670:intron | 15.0% |
| !! | TTATAAAATAAGAAATGTCA+TGG | + | chr3_4:73207519-73207538 | None:intergenic | 15.0% |
| !! | TAGTTGTTTATAGAAGAATT+TGG | + | chr3_4:73201827-73201846 | None:intergenic | 20.0% |
| !!! | TAACTTTCATTTTTTTGACT+TGG | - | chr3_4:73202113-73202132 | Msa0520670:CDS | 20.0% |
| !! | TTGTTAAACTTAGTTAGATT+CGG | - | chr3_4:73203390-73203409 | Msa0520670:intron | 20.0% |
| !!! | ATGATAAATACTTGTTTTGT+AGG | - | chr3_4:73203504-73203523 | Msa0520670:CDS | 20.0% |
| !!! | GTTTTATTCCATAATATTGA+AGG | - | chr3_4:73203992-73204011 | Msa0520670:CDS | 20.0% |
| !! | AAAGATAATAATTAATAGCC+AGG | + | chr3_4:73204097-73204116 | None:intergenic | 20.0% |
| !! | AATCCAAATAAGCTATAAAT+AGG | + | chr3_4:73204142-73204161 | None:intergenic | 20.0% |
| !! | TAATTAAGCATAAATTGAGT+AGG | + | chr3_4:73204333-73204352 | None:intergenic | 20.0% |
| !!! | AATTAAGTTGTTTATCCAAA+TGG | - | chr3_4:73204348-73204367 | Msa0520670:intron | 20.0% |
| !! | TAAAAAAAAAACACCGTTAA+GGG | + | chr3_4:73204420-73204439 | None:intergenic | 20.0% |
| !! | ATAAAAAAAAAACACCGTTA+AGG | + | chr3_4:73204421-73204440 | None:intergenic | 20.0% |
| !! | TGAAATAAGGAATACATTTA+CGG | - | chr3_4:73204517-73204536 | Msa0520670:intron | 20.0% |
| !!! | TTTAGACTTAAGTTGATTTT+CGG | + | chr3_4:73205234-73205253 | None:intergenic | 20.0% |
| !! | CCAAAACAAAAATAACAAAA+AGG | + | chr3_4:73205358-73205377 | None:intergenic | 20.0% |
| !!! | CCTTTTTGTTATTTTTGTTT+TGG | - | chr3_4:73205355-73205374 | Msa0520670:intron | 20.0% |
| !! | AACTCTTAAAGTTCAAATTT+CGG | - | chr3_4:73205667-73205686 | Msa0520670:intron | 20.0% |
| !! | TTTCTACGTTTATGAAAAAA+AGG | - | chr3_4:73206793-73206812 | Msa0520670:intron | 20.0% |
| !! | AATAATTGTACAATGATACA+GGG | + | chr3_4:73206999-73207018 | None:intergenic | 20.0% |
| !! | TTCTACCAAAAAAAATGATA+TGG | - | chr3_4:73207346-73207365 | Msa0520670:five_prime_UTR | 20.0% |
| !!! | GTTGTTTTGTTTTGGTATTA+AGG | + | chr3_4:73201719-73201738 | None:intergenic | 25.0% |
| !!! | TGTAGAATGTTGTTTTGTTT+TGG | + | chr3_4:73201727-73201746 | None:intergenic | 25.0% |
| !!! | AGTTAGGTGTTTATTTTTGA+AGG | - | chr3_4:73201931-73201950 | Msa0520670:CDS | 25.0% |
| !! | TAGGTTCAAAATGTTTGTTA+TGG | - | chr3_4:73202230-73202249 | Msa0520670:intron | 25.0% |
| ! | AATAAGTAATCGAATACTCA+CGG | - | chr3_4:73202505-73202524 | Msa0520670:intron | 25.0% |
| ! | TTTCACATATGTTGAAAATG+TGG | - | chr3_4:73202779-73202798 | Msa0520670:CDS | 25.0% |
| ! | GCATGACTAAAAAAGTTATA+TGG | + | chr3_4:73202879-73202898 | None:intergenic | 25.0% |
| ! | TTGTAAATGAAAGATAAGAG+AGG | - | chr3_4:73202910-73202929 | Msa0520670:intron | 25.0% |
| !!! | TGATGGTGTATTTTAAGATT+TGG | - | chr3_4:73202947-73202966 | Msa0520670:intron | 25.0% |
| ! | AAAGGTAGAAACTATTTATC+TGG | - | chr3_4:73203066-73203085 | Msa0520670:intron | 25.0% |
| ! | AAGGTAGAAACTATTTATCT+GGG | - | chr3_4:73203067-73203086 | Msa0520670:intron | 25.0% |
| !!! | ATTGAGTATTGCATTTTTTG+TGG | - | chr3_4:73203414-73203433 | Msa0520670:intron | 25.0% |
| !! | ATATGGAACCTATAAAGTTT+TGG | - | chr3_4:73203542-73203561 | Msa0520670:CDS | 25.0% |
| !! | TATGGAACCTATAAAGTTTT+GGG | - | chr3_4:73203543-73203562 | Msa0520670:CDS | 25.0% |
| !! | TTTTTGTACTGTTAACCATT+AGG | - | chr3_4:73203613-73203632 | Msa0520670:intron | 25.0% |
| !!! | GTCTCTTTTGACTATAAATA+GGG | + | chr3_4:73203921-73203940 | None:intergenic | 25.0% |
| !!! | TGTCTCTTTTGACTATAAAT+AGG | + | chr3_4:73203922-73203941 | None:intergenic | 25.0% |
| !!! | ATCTTTTTTTTTTGTGCGTT+TGG | - | chr3_4:73204111-73204130 | Msa0520670:CDS | 25.0% |
| ! | GCTTATTTGGATTTATCTTA+TGG | - | chr3_4:73204149-73204168 | Msa0520670:intron | 25.0% |
| !! | TAGCTTATGATATCTTTTAG+CGG | - | chr3_4:73204208-73204227 | Msa0520670:intron | 25.0% |
| ! | CTTATTTCAATAAGCTCTAT+AGG | - | chr3_4:73204238-73204257 | Msa0520670:intron | 25.0% |
| !! | TACTTTTCATATAAGCACTT+AGG | + | chr3_4:73204310-73204329 | None:intergenic | 25.0% |
| ! | TATTAAATAAGGATGCCATT+TGG | + | chr3_4:73204366-73204385 | None:intergenic | 25.0% |
| ! | GATCAGGTGTTTATTAAATA+AGG | + | chr3_4:73204377-73204396 | None:intergenic | 25.0% |
| !! | TATGAGATGTGATTCTAAAA+TGG | - | chr3_4:73205051-73205070 | Msa0520670:intron | 25.0% |
| ! | TGTTCTTCATGTTTAGTTAA+GGG | - | chr3_4:73205146-73205165 | Msa0520670:intron | 25.0% |
| ! | AAAAATTGCAAAGATAATGC+AGG | - | chr3_4:73205498-73205517 | Msa0520670:intron | 25.0% |
| ! | AATAAGAGTTAGAAAAGTGA+TGG | + | chr3_4:73205714-73205733 | None:intergenic | 25.0% |
| ! | GAGAAATTATTTCCTGAATA+AGG | + | chr3_4:73206235-73206254 | None:intergenic | 25.0% |
| !! | AGTCAATTTTATATATCCTG+AGG | - | chr3_4:73206540-73206559 | Msa0520670:intron | 25.0% |
| ! | ATACAAGTTCTTAAGTGAAA+AGG | + | chr3_4:73206649-73206668 | None:intergenic | 25.0% |
| ! | CTTAAGAACTTGTATACTAT+AGG | - | chr3_4:73206654-73206673 | Msa0520670:intron | 25.0% |
| !!! | TTTGTTATTGTCTTTGTTAC+AGG | - | chr3_4:73206749-73206768 | Msa0520670:CDS | 25.0% |
| ! | TTACTTCAAAGATTGATTGA+TGG | - | chr3_4:73206894-73206913 | Msa0520670:CDS | 25.0% |
| ! | CAATAATTGTACAATGATAC+AGG | + | chr3_4:73207000-73207019 | None:intergenic | 25.0% |
| ! | AAACTCAAAAAAACATCTAC+TGG | + | chr3_4:73207039-73207058 | None:intergenic | 25.0% |
| !!! | TTTTGTAATGTAAACTTGCT+CGG | - | chr3_4:73207057-73207076 | Msa0520670:CDS | 25.0% |
| ! | TTAAAATTTGTCACTCCTAT+CGG | - | chr3_4:73207201-73207220 | Msa0520670:CDS | 25.0% |
| !!! | CTTTGCCATATCATTTTTTT+TGG | + | chr3_4:73207354-73207373 | None:intergenic | 25.0% |
| ! | CAAAAAAAATGATATGGCAA+AGG | - | chr3_4:73207352-73207371 | Msa0520670:five_prime_UTR | 25.0% |
| AACAAACCTCAACTCTTAAA+AGG | - | chr3_4:73201689-73201708 | Msa0520670:three_prime_UTR | 30.0% | |
| TGTTTCTTTCGATCTAAGTT+AGG | - | chr3_4:73201915-73201934 | Msa0520670:CDS | 30.0% | |
| ATTCCATCAAAAACAACACT+AGG | + | chr3_4:73202021-73202040 | None:intergenic | 30.0% | |
| !!! | GTTGTTTTTGATGGAATTCA+TGG | - | chr3_4:73202024-73202043 | Msa0520670:intron | 30.0% |
| GGAATTCATGGAATTCATAA+TGG | - | chr3_4:73202036-73202055 | Msa0520670:intron | 30.0% | |
| TGAAAGTTAAAACGAAGTGT+TGG | + | chr3_4:73202102-73202121 | None:intergenic | 30.0% | |
| !! | TTGACTTGGATTGAAACTTT+AGG | - | chr3_4:73202127-73202146 | Msa0520670:CDS | 30.0% |
| TATACATGATATGCATGGAT+AGG | - | chr3_4:73202162-73202181 | Msa0520670:intron | 30.0% | |
| ATACATGATATGCATGGATA+GGG | - | chr3_4:73202163-73202182 | Msa0520670:intron | 30.0% | |
| ATTTAATCTAGCTATTGGGA+TGG | - | chr3_4:73202204-73202223 | Msa0520670:intron | 30.0% | |
| ! | GATTGGTTATTAAGGCTAAT+GGG | - | chr3_4:73202320-73202339 | Msa0520670:CDS | 30.0% |
| TACATCGAACATTTACCAAA+AGG | + | chr3_4:73202473-73202492 | None:intergenic | 30.0% | |
| ! | TAAATCCAATTTTGTTCCTG+TGG | + | chr3_4:73202572-73202591 | None:intergenic | 30.0% |
| ! | TAAAATTAAGTGCCGTGATA+TGG | - | chr3_4:73202623-73202642 | Msa0520670:intron | 30.0% |
| ACTATTTATCTGGGTAAATG+AGG | - | chr3_4:73203076-73203095 | Msa0520670:intron | 30.0% | |
| AAGACATACTTGTGGATATT+AGG | - | chr3_4:73203107-73203126 | Msa0520670:intron | 30.0% | |
| !!! | TTGTAGACAAAGGTTTTGTT+AGG | + | chr3_4:73203159-73203178 | None:intergenic | 30.0% |
| ! | ATAAACCTTGTTGTAGACAA+AGG | + | chr3_4:73203169-73203188 | None:intergenic | 30.0% |
| AACAAGGTTTATCTATCTCA+GGG | - | chr3_4:73203177-73203196 | Msa0520670:intron | 30.0% | |
| ! | ATTTTTCTGAACTTTCTCTC+TGG | - | chr3_4:73203319-73203338 | Msa0520670:intron | 30.0% |
| AACATCAGTTTCTAACAGTA+GGG | - | chr3_4:73203357-73203376 | Msa0520670:intron | 30.0% | |
| ATGGATCTGTATATTAAGCT+TGG | - | chr3_4:73203450-73203469 | Msa0520670:intron | 30.0% | |
| TGGATCTGTATATTAAGCTT+GGG | - | chr3_4:73203451-73203470 | Msa0520670:intron | 30.0% | |
| GGCATATTTCATTACGAATA+TGG | - | chr3_4:73203525-73203544 | Msa0520670:CDS | 30.0% | |
| ATGAACTCCCAAAACTTTAT+AGG | + | chr3_4:73203553-73203572 | None:intergenic | 30.0% | |
| ! | TTCATGTCTCTAATTTTGGA+AGG | - | chr3_4:73203568-73203587 | Msa0520670:intron | 30.0% |
| ACTTTAATTCACGAGAGATT+TGG | + | chr3_4:73203706-73203725 | None:intergenic | 30.0% | |
| !!! | ATTTTGACTTGAAACACTTC+AGG | - | chr3_4:73203734-73203753 | Msa0520670:intron | 30.0% |
| !! | TTTTGACTATAAATAGGGCA+CGG | + | chr3_4:73203916-73203935 | None:intergenic | 30.0% |
| TATTTGCGCCTTCAATATTA+TGG | + | chr3_4:73204003-73204022 | None:intergenic | 30.0% | |
| !! | CGCAAATATAAGTTGGATTT+TGG | - | chr3_4:73204015-73204034 | Msa0520670:CDS | 30.0% |
| !! | ATAAGTTGGATTTTGGCATT+AGG | - | chr3_4:73204022-73204041 | Msa0520670:CDS | 30.0% |
| GAGCCTATTTATAGCTTATT+TGG | - | chr3_4:73204136-73204155 | Msa0520670:intron | 30.0% | |
| ATGTAATCAAAGAGTGAATG+TGG | + | chr3_4:73204276-73204295 | None:intergenic | 30.0% | |
| GTACATAACTCAGATAACAA+AGG | + | chr3_4:73204597-73204616 | None:intergenic | 30.0% | |
| !! | ATGTGAGTCTTATTCTTGAA+GGG | + | chr3_4:73204732-73204751 | None:intergenic | 30.0% |
| ! | TTTTGAGCAATCAAAAGATC+TGG | + | chr3_4:73204761-73204780 | None:intergenic | 30.0% |
| !! | TTTTGATTGCTCAAAAGCAA+AGG | - | chr3_4:73204765-73204784 | Msa0520670:intron | 30.0% |
| TGTCTTAACTCCAATATTCA+TGG | - | chr3_4:73204856-73204875 | Msa0520670:intron | 30.0% | |
| !!! | GGATTTTTTTTCAAAGCACA+TGG | + | chr3_4:73204949-73204968 | None:intergenic | 30.0% |
| GAAAAAAAATCCTGAGAAGT+TGG | - | chr3_4:73204957-73204976 | Msa0520670:intron | 30.0% | |
| ! | CACAGTATCAGTAATTTTGT+AGG | + | chr3_4:73204995-73205014 | None:intergenic | 30.0% |
| CTACAAAATTACTGATACTG+TGG | - | chr3_4:73204993-73205012 | Msa0520670:intron | 30.0% | |
| TGTTAATCCTACTTCTTGTA+CGG | - | chr3_4:73205121-73205140 | Msa0520670:intron | 30.0% | |
| GTGTTCTTCATGTTTAGTTA+AGG | - | chr3_4:73205145-73205164 | Msa0520670:intron | 30.0% | |
| CAACTTAAGTCTAAAAGAGA+AGG | - | chr3_4:73205239-73205258 | Msa0520670:intron | 30.0% | |
| CACAAACAAAGAAGTTAGAT+GGG | + | chr3_4:73205322-73205341 | None:intergenic | 30.0% | |
| TCACAAACAAAGAAGTTAGA+TGG | + | chr3_4:73205323-73205342 | None:intergenic | 30.0% | |
| ! | ACTTCTTTGTTTGTGATATC+TGG | - | chr3_4:73205327-73205346 | Msa0520670:intron | 30.0% |
| TCTAAACGCCATTTAAAAGT+AGG | - | chr3_4:73205406-73205425 | Msa0520670:intron | 30.0% | |
| !! | TGAATGTGCCTACTTTTAAA+TGG | + | chr3_4:73205417-73205436 | None:intergenic | 30.0% |
| TCATATCAAGATGAGATATG+TGG | + | chr3_4:73205575-73205594 | None:intergenic | 30.0% | |
| CTTCTATTATACTCATCGAT+CGG | - | chr3_4:73205965-73205984 | Msa0520670:CDS | 30.0% | |
| TACAGTGTTAATTGACAATC+TGG | + | chr3_4:73206094-73206113 | None:intergenic | 30.0% | |
| ATTGTATGCTTGTTCAGATT+GGG | - | chr3_4:73206336-73206355 | Msa0520670:CDS | 30.0% | |
| ! | TAATTGGGTGATGTTTTTCA+AGG | - | chr3_4:73206488-73206507 | Msa0520670:intron | 30.0% |
| AAACAACCTATTGATCACAA+AGG | + | chr3_4:73206596-73206615 | None:intergenic | 30.0% | |
| CTACGTTTATGAAAAAAAGG+AGG | - | chr3_4:73206796-73206815 | Msa0520670:intron | 30.0% | |
| !! | CTTTGAAGTAACAAACTTCT+TGG | + | chr3_4:73206885-73206904 | None:intergenic | 30.0% |
| !!! | TTGATGGTTTTTTCTTCTTC+TGG | - | chr3_4:73206910-73206929 | Msa0520670:CDS | 30.0% |
| ! | CTAGATTTTTCTTAGATGAG+CGG | - | chr3_4:73206939-73206958 | Msa0520670:CDS | 30.0% |
| ! | TAGATTTTTCTTAGATGAGC+GGG | - | chr3_4:73206940-73206959 | Msa0520670:CDS | 30.0% |
| AAAGAGAGCTTAAAATGTTG+TGG | - | chr3_4:73207132-73207151 | Msa0520670:CDS | 30.0% | |
| AAGAGAGCTTAAAATGTTGT+GGG | - | chr3_4:73207133-73207152 | Msa0520670:CDS | 30.0% | |
| TAAAATTTGTCACTCCTATC+GGG | - | chr3_4:73207202-73207221 | Msa0520670:CDS | 30.0% | |
| ! | ATGTGATTGGTGATAATCTT+TGG | - | chr3_4:73207262-73207281 | Msa0520670:CDS | 30.0% |
| GATACATCAGCAAAAAACAA+TGG | + | chr3_4:73207320-73207339 | None:intergenic | 30.0% | |
| GTGAAACAGATTAGAGCAAT+TGG | + | chr3_4:73201229-73201248 | None:intergenic | 35.0% | |
| ATAATCAAATGCAGTCTGGA+AGG | + | chr3_4:73201458-73201477 | None:intergenic | 35.0% | |
| TTCCAGACTGCATTTGATTA+TGG | - | chr3_4:73201457-73201476 | Msa0520670:three_prime_UTR | 35.0% | |
| !! | GGTTAACCTTTTAAGAGTTG+AGG | + | chr3_4:73201698-73201717 | None:intergenic | 35.0% |
| TTAATCTCTGCAGCATTTGA+AGG | - | chr3_4:73201773-73201792 | Msa0520670:three_prime_UTR | 35.0% | |
| !! | AGTTGAGGTTGTTTTCCATA+TGG | - | chr3_4:73201796-73201815 | Msa0520670:three_prime_UTR | 35.0% |
| !!! | TCTCCTAGTGTTGTTTTTGA+TGG | - | chr3_4:73202015-73202034 | Msa0520670:intron | 35.0% |
| !! | AAACGAAGTGTTGGTAAAGT+AGG | + | chr3_4:73202093-73202112 | None:intergenic | 35.0% |
| CTGCATATACATGATATGCA+TGG | - | chr3_4:73202157-73202176 | Msa0520670:intron | 35.0% | |
| TACATGATATGCATGGATAG+GGG | - | chr3_4:73202164-73202183 | Msa0520670:intron | 35.0% | |
| ATCATTATGCTGGAAACAGT+AGG | + | chr3_4:73202269-73202288 | None:intergenic | 35.0% | |
| CTGAGTAATGATCATTATGC+TGG | + | chr3_4:73202279-73202298 | None:intergenic | 35.0% | |
| !! | GGATTGGTTATTAAGGCTAA+TGG | - | chr3_4:73202319-73202338 | Msa0520670:CDS | 35.0% |
| ! | ATGTTGTTCTTACCTCCTTT+TGG | - | chr3_4:73202455-73202474 | Msa0520670:intron | 35.0% |
| ATCGAACATTTACCAAAAGG+AGG | + | chr3_4:73202470-73202489 | None:intergenic | 35.0% | |
| ! | TTGAATCTGAAGTTTACCAC+AGG | - | chr3_4:73202553-73202572 | Msa0520670:intron | 35.0% |
| GTTTACCACAGGAACAAAAT+TGG | - | chr3_4:73202564-73202583 | Msa0520670:intron | 35.0% | |
| ! | CAACCAGTTTTTCCATATCA+CGG | + | chr3_4:73202638-73202657 | None:intergenic | 35.0% |
| GTGATATGGAAAAACTGGTT+GGG | - | chr3_4:73202637-73202656 | Msa0520670:intron | 35.0% | |
| TGATATGGAAAAACTGGTTG+GGG | - | chr3_4:73202638-73202657 | Msa0520670:intron | 35.0% | |
| AAGTAGTCACACATGCATAT+TGG | + | chr3_4:73202665-73202684 | None:intergenic | 35.0% | |
| TTCTCTTACCAGTTCATTGT+TGG | - | chr3_4:73202735-73202754 | Msa0520670:intron | 35.0% | |
| !! | AGGCATAAGAGAAGTTTTGA+TGG | - | chr3_4:73202930-73202949 | Msa0520670:intron | 35.0% |
| AAGTCTGAAAGACATACTTG+TGG | - | chr3_4:73203099-73203118 | Msa0520670:intron | 35.0% | |
| TTAGGAATAGAAAAGTCCAG+TGG | - | chr3_4:73203125-73203144 | Msa0520670:intron | 35.0% | |
| TAGGAATAGAAAAGTCCAGT+GGG | - | chr3_4:73203126-73203145 | Msa0520670:intron | 35.0% | |
| CAAAACCTTTGTCTACAACA+AGG | - | chr3_4:73203161-73203180 | Msa0520670:intron | 35.0% | |
| CAACAAGGTTTATCTATCTC+AGG | - | chr3_4:73203176-73203195 | Msa0520670:intron | 35.0% | |
| GAACATCAGTTTCTAACAGT+AGG | - | chr3_4:73203356-73203375 | Msa0520670:intron | 35.0% | |
| TTGTGGAGAAAAACGAAAGA+TGG | - | chr3_4:73203431-73203450 | Msa0520670:intron | 35.0% | |
| ! | GGAGTTCATGTCTCTAATTT+TGG | - | chr3_4:73203564-73203583 | Msa0520670:intron | 35.0% |
| !! | TCTCTAATTTTGGAAGGTCT+TGG | - | chr3_4:73203574-73203593 | Msa0520670:intron | 35.0% |
| TAAGAGCAAGAAAGACCTAA+TGG | + | chr3_4:73203631-73203650 | None:intergenic | 35.0% | |
| TTCACTCTTGATGCAAAACA+AGG | - | chr3_4:73203678-73203697 | Msa0520670:intron | 35.0% | |
| TTTGACTATAAATAGGGCAC+GGG | + | chr3_4:73203915-73203934 | None:intergenic | 35.0% | |
| TATAGTCAAAAGAGACATGC+TGG | - | chr3_4:73203925-73203944 | Msa0520670:intron | 35.0% | |
| ! | TTGAAGGCGCAAATATAAGT+TGG | - | chr3_4:73204008-73204027 | Msa0520670:CDS | 35.0% |
| !! | TGGATTTTGGCATTAGGATT+AGG | - | chr3_4:73204028-73204047 | Msa0520670:CDS | 35.0% |
| AGTTTCTGTCAAATCATCAC+TGG | - | chr3_4:73204055-73204074 | Msa0520670:CDS | 35.0% | |
| GTTTCTGTCAAATCATCACT+GGG | - | chr3_4:73204056-73204075 | Msa0520670:CDS | 35.0% | |
| !!! | GGGTTAAGAATTTTTTGTCC+TGG | - | chr3_4:73204076-73204095 | Msa0520670:CDS | 35.0% |
| TTAGGTTACGAAACTTGATC+AGG | + | chr3_4:73204393-73204412 | None:intergenic | 35.0% | |
| TTGGCATGATAACAAAGACA+GGG | + | chr3_4:73204642-73204661 | None:intergenic | 35.0% | |
| ATTGGCATGATAACAAAGAC+AGG | + | chr3_4:73204643-73204662 | None:intergenic | 35.0% | |
| TATCATGCCAATTGCACATT+TGG | - | chr3_4:73204651-73204670 | Msa0520670:intron | 35.0% | |
| ! | ATTTGGTGGAGTGGATATAT+AGG | - | chr3_4:73204668-73204687 | Msa0520670:intron | 35.0% |
| !! | TGTGAGTCTTATTCTTGAAG+GGG | + | chr3_4:73204731-73204750 | None:intergenic | 35.0% |
| !! | GATGTGAGTCTTATTCTTGA+AGG | + | chr3_4:73204733-73204752 | None:intergenic | 35.0% |
| !! | TTTTTCAAAGCACATGGTTC+AGG | + | chr3_4:73204943-73204962 | None:intergenic | 35.0% |
| TTAGAATTAGCCAACTTCTC+AGG | + | chr3_4:73204970-73204989 | None:intergenic | 35.0% | |
| GTTAATCCTACTTCTTGTAC+GGG | - | chr3_4:73205122-73205141 | Msa0520670:intron | 35.0% | |
| TTAATCCTACTTCTTGTACG+GGG | - | chr3_4:73205123-73205142 | Msa0520670:intron | 35.0% | |
| ! | ACTGTAATTTTTCTTGCAGG+AGG | - | chr3_4:73205169-73205188 | Msa0520670:CDS | 35.0% |
| ! | CTGTAATTTTTCTTGCAGGA+GGG | - | chr3_4:73205170-73205189 | Msa0520670:CDS | 35.0% |
| !! | AGATATACAGAAGCTTTGGA+GGG | + | chr3_4:73205266-73205285 | None:intergenic | 35.0% |
| ! | AAGATATACAGAAGCTTTGG+AGG | + | chr3_4:73205267-73205286 | None:intergenic | 35.0% |
| TCCAAAGCTTCTGTATATCT+TGG | - | chr3_4:73205266-73205285 | Msa0520670:intron | 35.0% | |
| TCCAAGATATACAGAAGCTT+TGG | + | chr3_4:73205270-73205289 | None:intergenic | 35.0% | |
| CACATTCACATAATTGTAGC+AGG | - | chr3_4:73205429-73205448 | Msa0520670:intron | 35.0% | |
| GGACATGACATGAACAAATT+GGG | + | chr3_4:73205544-73205563 | None:intergenic | 35.0% | |
| AGGACATGACATGAACAAAT+TGG | + | chr3_4:73205545-73205564 | None:intergenic | 35.0% | |
| ATGAGATATGTGGAGTAGAA+AGG | + | chr3_4:73205565-73205584 | None:intergenic | 35.0% | |
| TAAAGTTCAAATTTCGGAGC+TGG | - | chr3_4:73205673-73205692 | Msa0520670:intron | 35.0% | |
| CTTTGTAAGAGCAGTAATGA+AGG | + | chr3_4:73205945-73205964 | None:intergenic | 35.0% | |
| ! | TCGATCGGTTTATTCATTCA+TGG | - | chr3_4:73205980-73205999 | Msa0520670:CDS | 35.0% |
| ACCAGATTGTCAATTAACAC+TGG | - | chr3_4:73206062-73206081 | Msa0520670:intron | 35.0% | |
| TCCAGTGTTAATTGACAATC+TGG | + | chr3_4:73206066-73206085 | None:intergenic | 35.0% | |
| !! | GTCGTTAACTTGTCTAATGA+TGG | - | chr3_4:73206118-73206137 | Msa0520670:intron | 35.0% |
| TGTTGTGTAGTTCCTTATTC+AGG | - | chr3_4:73206220-73206239 | Msa0520670:intron | 35.0% | |
| CATCATTGTAGTTCTTGAGA+TGG | + | chr3_4:73206257-73206276 | None:intergenic | 35.0% | |
| TACAATGATGATCCAGCTAT+TGG | - | chr3_4:73206267-73206286 | Msa0520670:intron | 35.0% | |
| CATTGCACTTTCTAATGTGA+AGG | - | chr3_4:73206293-73206312 | Msa0520670:intron | 35.0% | |
| CATTGTATGCTTGTTCAGAT+TGG | - | chr3_4:73206335-73206354 | Msa0520670:CDS | 35.0% | |
| TTGTATGCTTGTTCAGATTG+GGG | - | chr3_4:73206337-73206356 | Msa0520670:CDS | 35.0% | |
| GATAAGTGAAACCATGATGT+GGG | + | chr3_4:73206381-73206400 | None:intergenic | 35.0% | |
| TGATAAGTGAAACCATGATG+TGG | + | chr3_4:73206382-73206401 | None:intergenic | 35.0% | |
| CATTAAAATCCCTTGCAGAA+GGG | - | chr3_4:73206463-73206482 | Msa0520670:CDS | 35.0% | |
| ! | TTTTATATATCCTGAGGTCG+TGG | - | chr3_4:73206546-73206565 | Msa0520670:intron | 35.0% |
| !! | TTGAATCCATTGATAGTGCT+TGG | - | chr3_4:73206710-73206729 | Msa0520670:CDS | 35.0% |
| GTAGAAAGCTGTAAATGCTA+AGG | + | chr3_4:73206780-73206799 | None:intergenic | 35.0% | |
| AAAAAGGAGGAAGACATTGA+CGG | - | chr3_4:73206809-73206828 | Msa0520670:intron | 35.0% | |
| !!! | TGGTTTTTTCTTCTTCTGGT+TGG | - | chr3_4:73206914-73206933 | Msa0520670:CDS | 35.0% |
| CATCTTCATTTAATCCACGT+TGG | - | chr3_4:73206969-73206988 | Msa0520670:intron | 35.0% | |
| !!! | GTAGAGGTATTTTTTTGCAG+TGG | - | chr3_4:73207081-73207100 | Msa0520670:CDS | 35.0% |
| ACTCCTATCGGGAATTTAAT+CGG | - | chr3_4:73207213-73207232 | Msa0520670:CDS | 35.0% | |
| AAACCGATTAAATTCCCGAT+AGG | + | chr3_4:73207219-73207238 | None:intergenic | 35.0% | |
| ATCACATCCCATATAAGCAA+GGG | + | chr3_4:73207249-73207268 | None:intergenic | 35.0% | |
| AATCACATCCCATATAAGCA+AGG | + | chr3_4:73207250-73207269 | None:intergenic | 35.0% | |
| TTGCTTATATGGGATGTGAT+TGG | - | chr3_4:73207249-73207268 | Msa0520670:CDS | 35.0% | |
| ! | TGATTGGTGATAATCTTTGG+CGG | - | chr3_4:73207265-73207284 | Msa0520670:CDS | 35.0% |
| TTGAGCAAACATGACTCAAA+GGG | + | chr3_4:73207291-73207310 | None:intergenic | 35.0% | |
| TTTGAGCAAACATGACTCAA+AGG | + | chr3_4:73207292-73207311 | None:intergenic | 35.0% | |
| TCAAAACCTGTAACATGACA+TGG | - | chr3_4:73207394-73207413 | Msa0520670:five_prime_UTR | 35.0% | |
| CAAAACCTGTAACATGACAT+GGG | - | chr3_4:73207395-73207414 | Msa0520670:five_prime_UTR | 35.0% | |
| GGACACACACGAAATAGTAA+GGG | + | chr3_4:73201285-73201304 | None:intergenic | 40.0% | |
| AAAGATATCGCAGCCGTAAA+TGG | + | chr3_4:73201323-73201342 | None:intergenic | 40.0% | |
| GCGATATCTTTCCTCACAAA+AGG | - | chr3_4:73201332-73201351 | Msa0520670:three_prime_UTR | 40.0% | |
| AGTTATGGATCACAGAGTCA+CGG | + | chr3_4:73201433-73201452 | None:intergenic | 40.0% | |
| CAGACTGCATTTGATTATGG+CGG | - | chr3_4:73201460-73201479 | Msa0520670:three_prime_UTR | 40.0% | |
| !! | TTCAATGGTGGATCCCAAAT+CGG | + | chr3_4:73201588-73201607 | None:intergenic | 40.0% |
| AGAAGACCTAATTGCTCAGA+GGG | + | chr3_4:73201617-73201636 | None:intergenic | 40.0% | |
| TCTGAGCAATTAGGTCTTCT+CGG | - | chr3_4:73201617-73201636 | Msa0520670:three_prime_UTR | 40.0% | |
| ! | AAGAATTTGGAGCAGCCATA+TGG | + | chr3_4:73201814-73201833 | None:intergenic | 40.0% |
| CATCATTCCGTCAATGTTGA+AGG | - | chr3_4:73201854-73201873 | Msa0520670:CDS | 40.0% | |
| TGCTTCACCTTCAACATTGA+CGG | + | chr3_4:73201864-73201883 | None:intergenic | 40.0% | |
| CTAGCTATTGGGATGGAAAT+AGG | - | chr3_4:73202211-73202230 | Msa0520670:intron | 40.0% | |
| ATTAAGGCTAATGGGACTAG+TGG | - | chr3_4:73202328-73202347 | Msa0520670:CDS | 40.0% | |
| ! | TAAACTGTTGGTGCCTTCAT+TGG | - | chr3_4:73202399-73202418 | Msa0520670:intron | 40.0% |
| TTTGCAGCATCAACCAATGA+AGG | + | chr3_4:73202415-73202434 | None:intergenic | 40.0% | |
| ! | TTCATTGGTTGATGCTGCAA+AGG | - | chr3_4:73202414-73202433 | Msa0520670:intron | 40.0% |
| GGTAAGAACAACATCTACCT+TGG | + | chr3_4:73202449-73202468 | None:intergenic | 40.0% | |
| CGTGATATGGAAAAACTGGT+TGG | - | chr3_4:73202636-73202655 | Msa0520670:intron | 40.0% | |
| ! | TACCAGTTCATTGTTGGTGA+TGG | - | chr3_4:73202741-73202760 | Msa0520670:intron | 40.0% |
| !! | TCCTGCAGCTTTTTCTGAAA+CGG | + | chr3_4:73202850-73202869 | None:intergenic | 40.0% |
| ATTGTCTGTTCTTTCTTCCC+TGG | - | chr3_4:73202993-73203012 | Msa0520670:intron | 40.0% | |
| ! | TGTTAAAAGTGTGCACACCA+GGG | + | chr3_4:73203013-73203032 | None:intergenic | 40.0% |
| ! | TTGTTAAAAGTGTGCACACC+AGG | + | chr3_4:73203014-73203033 | None:intergenic | 40.0% |
| ! | TGGTGTGCACACTTTTAACA+AGG | - | chr3_4:73203013-73203032 | Msa0520670:intron | 40.0% |
| TCAATCACCCTCAGTTTGAA+CGG | - | chr3_4:73203234-73203253 | Msa0520670:intron | 40.0% | |
| TGGAAGGTCTTGGATATCAA+AGG | - | chr3_4:73203584-73203603 | Msa0520670:intron | 40.0% | |
| GTAACCTAATGCACCCTTAA+CGG | - | chr3_4:73204404-73204423 | Msa0520670:intron | 40.0% | |
| ! | TTTTATGCCCACGAGAATAC+TGG | - | chr3_4:73204435-73204454 | Msa0520670:intron | 40.0% |
| TAGACAACCAGTATTCTCGT+GGG | + | chr3_4:73204445-73204464 | None:intergenic | 40.0% | |
| ATAGACAACCAGTATTCTCG+TGG | + | chr3_4:73204446-73204465 | None:intergenic | 40.0% | |
| ATCTGAGTTATGTACCTTGC+AGG | - | chr3_4:73204602-73204621 | Msa0520670:intron | 40.0% | |
| AAGACAGGGATCTTTATGCT+TGG | + | chr3_4:73204628-73204647 | None:intergenic | 40.0% | |
| ! | AGAACCTGTAGAGGTATGAT+GGG | + | chr3_4:73204808-73204827 | None:intergenic | 40.0% |
| CAGTTCAGAGCCATGAATAT+TGG | + | chr3_4:73204869-73204888 | None:intergenic | 40.0% | |
| GGATGATGTTTCTTGCTCAA+AGG | - | chr3_4:73205072-73205091 | Msa0520670:intron | 40.0% | |
| ! | GGGACTGTAATTTTTCTTGC+AGG | - | chr3_4:73205166-73205185 | Msa0520670:CDS | 40.0% |
| GCTTCTGTATATCTTGGAAG+TGG | - | chr3_4:73205272-73205291 | Msa0520670:intron | 40.0% | |
| GTATATCTTGGAAGTGGAAG+AGG | - | chr3_4:73205278-73205297 | Msa0520670:intron | 40.0% | |
| ! | CAGTGTGCTTACATTTTTGC+AGG | + | chr3_4:73206013-73206032 | None:intergenic | 40.0% |
| TTGAGAAAATGCCCACATCA+TGG | - | chr3_4:73206367-73206386 | Msa0520670:CDS | 40.0% | |
| CACAGCAAAATTCCAAGATG+AGG | + | chr3_4:73206439-73206458 | None:intergenic | 40.0% | |
| GCATTAAAATCCCTTGCAGA+AGG | - | chr3_4:73206462-73206481 | Msa0520670:CDS | 40.0% | |
| CCAATTATTCCCTTCTGCAA+GGG | + | chr3_4:73206475-73206494 | None:intergenic | 40.0% | |
| CCTTGCAGAAGGGAATAATT+GGG | - | chr3_4:73206473-73206492 | Msa0520670:intron | 40.0% | |
| CTATTGATCACAAAGGAGAG+AGG | + | chr3_4:73206589-73206608 | None:intergenic | 40.0% | |
| CTCTCTCCTTTGTGATCAAT+AGG | - | chr3_4:73206587-73206606 | Msa0520670:intron | 40.0% | |
| TCTCATCCAAGCACTATCAA+TGG | + | chr3_4:73206719-73206738 | None:intergenic | 40.0% | |
| !!! | TTTTGTTGACTCTGAAGCAG+TGG | - | chr3_4:73207108-73207127 | Msa0520670:CDS | 40.0% |
| GAGCTTAAAATGTTGTGGGT+TGG | - | chr3_4:73207137-73207156 | Msa0520670:CDS | 40.0% | |
| !! | CTTAAAATGTTGTGGGTTGG+AGG | - | chr3_4:73207140-73207159 | Msa0520670:CDS | 40.0% |
| ! | TGGAGGTTGATTGATAAACC+TGG | - | chr3_4:73207157-73207176 | Msa0520670:CDS | 40.0% |
| ! | GGAGGTTGATTGATAAACCT+GGG | - | chr3_4:73207158-73207177 | Msa0520670:CDS | 40.0% |
| ACCTGGGAAGCTATTTAGAT+TGG | - | chr3_4:73207174-73207193 | Msa0520670:CDS | 40.0% | |
| CCTGGGAAGCTATTTAGATT+GGG | - | chr3_4:73207175-73207194 | Msa0520670:CDS | 40.0% | |
| ! | TTTTGATGCATCCGACTCAA+AGG | + | chr3_4:73207380-73207399 | None:intergenic | 40.0% |
| TATGACCCATGTCATGTTAC+AGG | + | chr3_4:73207403-73207422 | None:intergenic | 40.0% | |
| CGGACACACACGAAATAGTA+AGG | + | chr3_4:73201286-73201305 | None:intergenic | 45.0% | |
| GACGGTTCCATCACCATTTA+CGG | - | chr3_4:73201307-73201326 | Msa0520670:three_prime_UTR | 45.0% | |
| ! | GCAGTCTGGAAGGTTAGTTA+TGG | + | chr3_4:73201448-73201467 | None:intergenic | 45.0% |
| CGCCATAATCAAATGCAGTC+TGG | + | chr3_4:73201462-73201481 | None:intergenic | 45.0% | |
| ACTGCATTTGATTATGGCGG+CGG | - | chr3_4:73201463-73201482 | Msa0520670:three_prime_UTR | 45.0% | |
| GGACACAGTAGGTGTTCAAT+CGG | + | chr3_4:73201559-73201578 | None:intergenic | 45.0% | |
| ! | AGAGGGTTCAAGTTCAATGG+TGG | + | chr3_4:73201600-73201619 | None:intergenic | 45.0% |
| ! | CTCAGAGGGTTCAAGTTCAA+TGG | + | chr3_4:73201603-73201622 | None:intergenic | 45.0% |
| CTTGAACCCTCTGAGCAATT+AGG | - | chr3_4:73201608-73201627 | Msa0520670:three_prime_UTR | 45.0% | |
| GAGAAGACCTAATTGCTCAG+AGG | + | chr3_4:73201618-73201637 | None:intergenic | 45.0% | |
| !! | AGGTTTGTTGCGAAGATCGA+CGG | + | chr3_4:73201678-73201697 | None:intergenic | 45.0% |
| TGCAGCATTTGAAGGAGTTG+AGG | - | chr3_4:73201781-73201800 | Msa0520670:three_prime_UTR | 45.0% | |
| CATTGACGGAATGATGAAGC+TGG | + | chr3_4:73201850-73201869 | None:intergenic | 45.0% | |
| ATCGTTGCCTTATCCACCTT+CGG | - | chr3_4:73202065-73202084 | Msa0520670:intron | 45.0% | |
| !! | GTTGGTAAAGTAGGTACCGA+AGG | + | chr3_4:73202084-73202103 | None:intergenic | 45.0% |
| TTACTCAGCAACTAAAGCCG+AGG | - | chr3_4:73202291-73202310 | Msa0520670:CDS | 45.0% | |
| TACTCAGCAACTAAAGCCGA+GGG | - | chr3_4:73202292-73202311 | Msa0520670:CDS | 45.0% | |
| AATAACCAATCCCTCACCCT+CGG | + | chr3_4:73202311-73202330 | None:intergenic | 45.0% | |
| !! | GGGTGAGGGATTGGTTATTA+AGG | - | chr3_4:73202312-73202331 | Msa0520670:CDS | 45.0% |
| ! | ATACGCCCTAGCAGCATTTT+TGG | - | chr3_4:73202367-73202386 | Msa0520670:CDS | 45.0% |
| CAGGTCCAAAAATGCTGCTA+GGG | + | chr3_4:73202375-73202394 | None:intergenic | 45.0% | |
| TGGACCTGGTGATAAACTGT+TGG | - | chr3_4:73202387-73202406 | Msa0520670:CDS | 45.0% | |
| GTGCCGTGATATGGAAAAAC+TGG | - | chr3_4:73202632-73202651 | Msa0520670:intron | 45.0% | |
| TGCCATCACCAACAATGAAC+TGG | + | chr3_4:73202746-73202765 | None:intergenic | 45.0% | |
| AGCTCGATCAGCACATATGT+GGG | + | chr3_4:73202811-73202830 | None:intergenic | 45.0% | |
| ACCGTTTCAGAAAAAGCTGC+AGG | - | chr3_4:73202846-73202865 | Msa0520670:CDS | 45.0% | |
| TTCAGAAAAAGCTGCAGGAG+AGG | - | chr3_4:73202851-73202870 | Msa0520670:CDS | 45.0% | |
| TCTATCTCAGGGACAAACTC+AGG | - | chr3_4:73203188-73203207 | Msa0520670:intron | 45.0% | |
| CTATCTCAGGGACAAACTCA+GGG | - | chr3_4:73203189-73203208 | Msa0520670:intron | 45.0% | |
| CAATCACCCTCAGTTTGAAC+GGG | - | chr3_4:73203235-73203254 | Msa0520670:intron | 45.0% | |
| AATCACCCTCAGTTTGAACG+GGG | - | chr3_4:73203236-73203255 | Msa0520670:intron | 45.0% | |
| ! | AACACCGTTAAGGGTGCATT+AGG | + | chr3_4:73204411-73204430 | None:intergenic | 45.0% |
| ATCTTTATGCTTGGCCTGCA+AGG | + | chr3_4:73204619-73204638 | None:intergenic | 45.0% | |
| CATGCCAATTGCACATTTGG+TGG | - | chr3_4:73204654-73204673 | Msa0520670:intron | 45.0% | |
| CACTCCACCAAATGTGCAAT+TGG | + | chr3_4:73204661-73204680 | None:intergenic | 45.0% | |
| ! | CAATTGCACATTTGGTGGAG+TGG | - | chr3_4:73204659-73204678 | Msa0520670:intron | 45.0% |
| GAGTGGATATATAGGCTGCT+TGG | - | chr3_4:73204676-73204695 | Msa0520670:intron | 45.0% | |
| ! | GAGGCACCTTCATTCCATAT+GGG | + | chr3_4:73204702-73204721 | None:intergenic | 45.0% |
| ! | TGAGGCACCTTCATTCCATA+TGG | + | chr3_4:73204703-73204722 | None:intergenic | 45.0% |
| !! | GTATGATGGGTGCATAGTCA+AGG | + | chr3_4:73204795-73204814 | None:intergenic | 45.0% |
| ! | CAGAACCTGTAGAGGTATGA+TGG | + | chr3_4:73204809-73204828 | None:intergenic | 45.0% |
| AAACGTCACAGAACCTGTAG+AGG | + | chr3_4:73204817-73204836 | None:intergenic | 45.0% | |
| !! | TTTTCTTGCAGGAGGGCATA+CGG | - | chr3_4:73205177-73205196 | Msa0520670:CDS | 45.0% |
| GCAGGAAGTTGCAGTAGTTT+AGG | - | chr3_4:73205516-73205535 | Msa0520670:intron | 45.0% | |
| TCAGTGTAACCTGCTAATGC+TGG | - | chr3_4:73205762-73205781 | Msa0520670:intron | 45.0% | |
| CAGTGTAACCTGCTAATGCT+GGG | - | chr3_4:73205763-73205782 | Msa0520670:intron | 45.0% | |
| ATACAACTCCCAGCATTAGC+AGG | + | chr3_4:73205774-73205793 | None:intergenic | 45.0% | |
| AGTGCAATGTGTCCAATAGC+TGG | + | chr3_4:73206282-73206301 | None:intergenic | 45.0% | |
| CTTTCTCAGTTGCCTCATCT+TGG | - | chr3_4:73206424-73206443 | Msa0520670:CDS | 45.0% | |
| CCCTTGCAGAAGGGAATAAT+TGG | - | chr3_4:73206472-73206491 | Msa0520670:intron | 45.0% | |
| CCCAATTATTCCCTTCTGCA+AGG | + | chr3_4:73206476-73206495 | None:intergenic | 45.0% | |
| AAGTTTGAATCCACGACCTC+AGG | + | chr3_4:73206559-73206578 | None:intergenic | 45.0% | |
| TCTTAAGTGAAAAGGCTCCC+AGG | + | chr3_4:73206641-73206660 | None:intergenic | 45.0% | |
| TCGCTTTCTCTCATGTTGTG+TGG | - | chr3_4:73206682-73206701 | Msa0520670:CDS | 45.0% | |
| TGATACAGGGAATTCCAACG+TGG | + | chr3_4:73206986-73207005 | None:intergenic | 45.0% | |
| ! | TGTAAACTTGCTCGGAGTAG+AGG | - | chr3_4:73207065-73207084 | Msa0520670:CDS | 45.0% |
| CCCAATCTAAATAGCTTCCC+AGG | + | chr3_4:73207178-73207197 | None:intergenic | 45.0% | |
| ! | TCCCATATAAGCAAGGGCAT+CGG | + | chr3_4:73207243-73207262 | None:intergenic | 45.0% |
| TATTTCGTGTGTGTCCGCGA+CGG | - | chr3_4:73201289-73201308 | Msa0520670:three_prime_UTR | 50.0% | |
| !! | AAATGGTGATGGAACCGTCG+CGG | + | chr3_4:73201306-73201325 | None:intergenic | 50.0% |
| ATCGCAGCCGTAAATGGTGA+TGG | + | chr3_4:73201317-73201336 | None:intergenic | 50.0% | |
| TCACCAACTGCAAGCTTCAG+CGG | - | chr3_4:73201377-73201396 | Msa0520670:three_prime_UTR | 50.0% | |
| ATCCACGTCCTACCTTCTTC+TGG | - | chr3_4:73201404-73201423 | Msa0520670:three_prime_UTR | 50.0% | |
| CTCGGTCAAGCTTTACACTC+CGG | - | chr3_4:73201635-73201654 | Msa0520670:three_prime_UTR | 50.0% | |
| GGAGACATATTGAGCACGAC+CGG | + | chr3_4:73201657-73201676 | None:intergenic | 50.0% | |
| !! | GTAGGTACCGAAGGTGGATA+AGG | + | chr3_4:73202075-73202094 | None:intergenic | 50.0% |
| !! | GGTAAAGTAGGTACCGAAGG+TGG | + | chr3_4:73202081-73202100 | None:intergenic | 50.0% |
| TAGGGCGTATGCAACATGTC+AGG | + | chr3_4:73202357-73202376 | None:intergenic | 50.0% | |
| CCAGGTCCAAAAATGCTGCT+AGG | + | chr3_4:73202376-73202395 | None:intergenic | 50.0% | |
| !! | CCTAGCAGCATTTTTGGACC+TGG | - | chr3_4:73202373-73202392 | Msa0520670:CDS | 50.0% |
| GGCACCAACAGTTTATCACC+AGG | + | chr3_4:73202394-73202413 | None:intergenic | 50.0% | |
| ! | TTGGTTGATGCTGCAAAGGC+AGG | - | chr3_4:73202418-73202437 | Msa0520670:intron | 50.0% |
| ! | TGGTTGATGCTGCAAAGGCA+GGG | - | chr3_4:73202419-73202438 | Msa0520670:intron | 50.0% |
| TGCAAAGGCAGGGAAATCCA+AGG | - | chr3_4:73202429-73202448 | Msa0520670:intron | 50.0% | |
| GAGCTCGATCAGCACATATG+TGG | + | chr3_4:73202812-73202831 | None:intergenic | 50.0% | |
| ! | TGATCGAGCTCTAGCTTCAG+AGG | - | chr3_4:73202821-73202840 | Msa0520670:CDS | 50.0% |
| ! | GATCGAGCTCTAGCTTCAGA+GGG | - | chr3_4:73202822-73202841 | Msa0520670:CDS | 50.0% |
| TTGTTAGGATGTCAGCCCAC+TGG | + | chr3_4:73203144-73203163 | None:intergenic | 50.0% | |
| ! | GTGTCTGACAAGCTTGCTCT+TGG | - | chr3_4:73203211-73203230 | Msa0520670:intron | 50.0% |
| ATCACCCTCAGTTTGAACGG+GGG | - | chr3_4:73203237-73203256 | Msa0520670:intron | 50.0% | |
| ATAGCCCCCGTTCAAACTGA+GGG | + | chr3_4:73203244-73203263 | None:intergenic | 50.0% | |
| AATAGCCCCCGTTCAAACTG+AGG | + | chr3_4:73203245-73203264 | None:intergenic | 50.0% | |
| GCTGGCATGTGACTATACTG+AGG | - | chr3_4:73203943-73203962 | Msa0520670:CDS | 50.0% | |
| TATAGGCTGCTTGGCCCATA+TGG | - | chr3_4:73204685-73204704 | Msa0520670:intron | 50.0% | |
| GCTTGGCCCATATGGAATGA+AGG | - | chr3_4:73204693-73204712 | Msa0520670:intron | 50.0% | |
| ATTCTTGAAGGGGTCAGCTG+AGG | + | chr3_4:73204721-73204740 | None:intergenic | 50.0% | |
| ! | TGATGGGTGCATAGTCAAGG+CGG | + | chr3_4:73204792-73204811 | None:intergenic | 50.0% |
| TGCACCCATCATACCTCTAC+AGG | - | chr3_4:73204801-73204820 | Msa0520670:intron | 50.0% | |
| GAACACCCCGTACAAGAAGT+AGG | + | chr3_4:73205131-73205150 | None:intergenic | 50.0% | |
| ACGTGTCAGCAACTGCAATG+TGG | + | chr3_4:73205838-73205857 | None:intergenic | 50.0% | |
| CAGTTGCTGACACGTTGCTT+TGG | - | chr3_4:73205843-73205862 | Msa0520670:intron | 50.0% | |
| ! | TGCTGACACGTTGCTTTGGA+AGG | - | chr3_4:73205847-73205866 | Msa0520670:intron | 50.0% |
| TCTGCTCGTTCTTAGCTTCC+TGG | - | chr3_4:73206620-73206639 | Msa0520670:intron | 50.0% | |
| CTGCTCGTTCTTAGCTTCCT+GGG | - | chr3_4:73206621-73206640 | Msa0520670:intron | 50.0% | |
| TGCCGATGCCCTTGCTTATA+TGG | - | chr3_4:73207238-73207257 | Msa0520670:CDS | 50.0% | |
| GCCGATGCCCTTGCTTATAT+GGG | - | chr3_4:73207239-73207258 | Msa0520670:CDS | 50.0% | |
| TGGCAAAGGCTCCTTTGAGT+CGG | - | chr3_4:73207366-73207385 | Msa0520670:five_prime_UTR | 50.0% | |
| ! | GACGACAGTCGCCTTTTGTG+AGG | + | chr3_4:73201346-73201365 | None:intergenic | 55.0% |
| AAAGGCGACTGTCGTCGCAA+CGG | - | chr3_4:73201350-73201369 | Msa0520670:three_prime_UTR | 55.0% | |
| CACCAGAAGAAGGTAGGACG+TGG | + | chr3_4:73201409-73201428 | None:intergenic | 55.0% | |
| CACGGACACCAGAAGAAGGT+AGG | + | chr3_4:73201415-73201434 | None:intergenic | 55.0% | |
| GAGTCACGGACACCAGAAGA+AGG | + | chr3_4:73201419-73201438 | None:intergenic | 55.0% | |
| GCATTTGATTATGGCGGCGG+CGG | - | chr3_4:73201466-73201485 | Msa0520670:three_prime_UTR | 55.0% | |
| GAAAGGTGGTGTGTGGTCAC+CGG | - | chr3_4:73201491-73201510 | Msa0520670:three_prime_UTR | 55.0% | |
| !! | TGTGTCCGCATCGCCGATTT+GGG | - | chr3_4:73201572-73201591 | Msa0520670:three_prime_UTR | 55.0% |
| TGGATCCCAAATCGGCGATG+CGG | + | chr3_4:73201580-73201599 | None:intergenic | 55.0% | |
| AGCAACTAAAGCCGAGGGTG+AGG | - | chr3_4:73202297-73202316 | Msa0520670:CDS | 55.0% | |
| GCAACTAAAGCCGAGGGTGA+GGG | - | chr3_4:73202298-73202317 | Msa0520670:CDS | 55.0% | |
| TAAAGCCGAGGGTGAGGGAT+TGG | - | chr3_4:73202303-73202322 | Msa0520670:CDS | 55.0% | |
| TTTGATTATGGCGGCGGCGG+AGG | - | chr3_4:73201469-73201488 | Msa0520670:three_prime_UTR | 60.0% | |
| AGCAGCAAAGCCTCGTCCTC+CGG | + | chr3_4:73201513-73201532 | None:intergenic | 60.0% | |
| ATCGGCGATGCGGACACAGT+AGG | + | chr3_4:73201570-73201589 | None:intergenic | 60.0% | |
| ! | CTGTGTCCGCATCGCCGATT+TGG | - | chr3_4:73201571-73201590 | Msa0520670:three_prime_UTR | 60.0% |
| ! | TCTTGCAGGAGGGCATACGG+AGG | - | chr3_4:73205180-73205199 | Msa0520670:CDS | 60.0% |
| GCGCCGCTGAAGCTTGCAGT+TGG | + | chr3_4:73201383-73201402 | None:intergenic | 65.0% | |
| TTATGGCGGCGGCGGAGGAA+AGG | - | chr3_4:73201474-73201493 | Msa0520670:three_prime_UTR | 65.0% | |
| GGCGGAGGAAAGGTGGTGTG+TGG | - | chr3_4:73201484-73201503 | Msa0520670:three_prime_UTR | 65.0% | |
| AGGTGGTGTGTGGTCACCGG+AGG | - | chr3_4:73201494-73201513 | Msa0520670:three_prime_UTR | 65.0% | |
| TGTGTGGTCACCGGAGGACG+AGG | - | chr3_4:73201500-73201519 | Msa0520670:three_prime_UTR | 65.0% | |
| TGGCGGCGGCGGAGGAAAGG+TGG | - | chr3_4:73201477-73201496 | Msa0520670:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 73201220 | 73207543 | 73201220 | ID=Msa0520670;Name=Msa0520670 |
| chr3_4 | mRNA | 73201220 | 73207543 | 73201220 | ID=Msa0520670-mRNA-1;Parent=Msa0520670;Name=Msa0520670-mRNA-1;_AED=0.09;_eAED=0.09;_QI=256|1|1|1|1|1|12|630|562 |
| chr3_4 | exon | 73201220 | 73201992 | 73201220 | ID=Msa0520670-mRNA-1:exon:20518;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73202088 | 73202154 | 73202088 | ID=Msa0520670-mRNA-1:exon:20517;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73202254 | 73202410 | 73202254 | ID=Msa0520670-mRNA-1:exon:20516;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73202743 | 73202917 | 73202743 | ID=Msa0520670-mRNA-1:exon:20515;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73203464 | 73203575 | 73203464 | ID=Msa0520670-mRNA-1:exon:20514;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73203941 | 73204139 | 73203941 | ID=Msa0520670-mRNA-1:exon:20513;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73205158 | 73205237 | 73205158 | ID=Msa0520670-mRNA-1:exon:20512;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73205891 | 73206016 | 73205891 | ID=Msa0520670-mRNA-1:exon:20511;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73206313 | 73206483 | 73206313 | ID=Msa0520670-mRNA-1:exon:20510;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73206677 | 73206810 | 73206677 | ID=Msa0520670-mRNA-1:exon:20509;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73206888 | 73206977 | 73206888 | ID=Msa0520670-mRNA-1:exon:20508;Parent=Msa0520670-mRNA-1 |
| chr3_4 | exon | 73207053 | 73207543 | 73207053 | ID=Msa0520670-mRNA-1:exon:20507;Parent=Msa0520670-mRNA-1 |
| chr3_4 | five_prime_UTR | 73207288 | 73207543 | 73207288 | ID=Msa0520670-mRNA-1:five_prime_utr;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73207053 | 73207287 | 73207053 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73206888 | 73206977 | 73206888 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73206677 | 73206810 | 73206677 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73206313 | 73206483 | 73206313 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73205891 | 73206016 | 73205891 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73205158 | 73205237 | 73205158 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73203941 | 73204139 | 73203941 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73203464 | 73203575 | 73203464 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73202743 | 73202917 | 73202743 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73202254 | 73202410 | 73202254 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73202088 | 73202154 | 73202088 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | CDS | 73201850 | 73201992 | 73201850 | ID=Msa0520670-mRNA-1:cds;Parent=Msa0520670-mRNA-1 |
| chr3_4 | three_prime_UTR | 73201220 | 73201849 | 73201220 | ID=Msa0520670-mRNA-1:three_prime_utr;Parent=Msa0520670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
