Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567610 | XP_013442186.1 | 99.834 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0 | 1250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567610 | sp|Q3ZBR5|TTC1_BOVIN | 34.188 | 117 | 74 | 1 | 387 | 503 | 98 | 211 | 9.47e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567610 | A0A072TG43 | 99.834 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0 | 1250 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa0567610 | 0.803846 | 2.868519e-49 | -8.615850e-47 |
| Msa0013270 | Msa0567610 | 0.808785 | 2.610862e-50 | -8.615850e-47 |
| Msa0017300 | Msa0567610 | -0.813544 | 2.426150e-51 | -8.615850e-47 |
| Msa0029380 | Msa0567610 | 0.822391 | 2.429023e-53 | -8.615850e-47 |
| Msa0033220 | Msa0567610 | 0.868055 | 8.677348e-66 | -8.615850e-47 |
| Msa0040860 | Msa0567610 | -0.815102 | 1.098075e-51 | -8.615850e-47 |
| Msa0077570 | Msa0567610 | -0.818668 | 1.738454e-52 | -8.615850e-47 |
| Msa0079880 | Msa0567610 | 0.867089 | 1.769217e-65 | -8.615850e-47 |
| Msa0080030 | Msa0567610 | 0.847299 | 1.262753e-59 | -8.615850e-47 |
| Msa0102240 | Msa0567610 | 0.809413 | 1.915626e-50 | -8.615850e-47 |
| Msa0108630 | Msa0567610 | 0.807071 | 6.045787e-50 | -8.615850e-47 |
| Msa0124910 | Msa0567610 | 0.834032 | 3.788361e-56 | -8.615850e-47 |
| Msa0165640 | Msa0567610 | 0.852425 | 4.657252e-61 | -8.615850e-47 |
| Msa0169410 | Msa0567610 | 0.839475 | 1.549560e-57 | -8.615850e-47 |
| Msa0173250 | Msa0567610 | 0.814930 | 1.198514e-51 | -8.615850e-47 |
| Msa0177320 | Msa0567610 | 0.803139 | 4.019459e-49 | -8.615850e-47 |
| Msa0184500 | Msa0567610 | 0.813433 | 2.566267e-51 | -8.615850e-47 |
| Msa0195230 | Msa0567610 | 0.843105 | 1.719338e-58 | -8.615850e-47 |
| Msa0195260 | Msa0567610 | 0.839673 | 1.376490e-57 | -8.615850e-47 |
| Msa0198990 | Msa0567610 | 0.800053 | 1.726126e-48 | -8.615850e-47 |
| Msa0203080 | Msa0567610 | 0.852032 | 6.024351e-61 | -8.615850e-47 |
| Msa0371350 | Msa0567610 | -0.830174 | 3.406996e-55 | -8.615850e-47 |
| Msa0372130 | Msa0567610 | 0.807943 | 3.947725e-50 | -8.615850e-47 |
| Msa0386880 | Msa0567610 | 0.819650 | 1.039204e-52 | -8.615850e-47 |
| Msa0388250 | Msa0567610 | 0.804309 | 2.298364e-49 | -8.615850e-47 |
| Msa0402770 | Msa0567610 | 0.808417 | 3.129027e-50 | -8.615850e-47 |
| Msa0412790 | Msa0567610 | 0.838151 | 3.408826e-57 | -8.615850e-47 |
| Msa0413170 | Msa0567610 | 0.831135 | 1.981647e-55 | -8.615850e-47 |
| Msa0419420 | Msa0567610 | -0.803414 | 3.525782e-49 | -8.615850e-47 |
| Msa0433630 | Msa0567610 | 0.809323 | 2.002347e-50 | -8.615850e-47 |
| Msa0437480 | Msa0567610 | 0.817409 | 3.347189e-52 | -8.615850e-47 |
| Msa0438680 | Msa0567610 | -0.814758 | 1.308861e-51 | -8.615850e-47 |
| Msa0440350 | Msa0567610 | 0.816980 | 4.179387e-52 | -8.615850e-47 |
| Msa0447870 | Msa0567610 | 0.807716 | 4.413407e-50 | -8.615850e-47 |
| Msa0240540 | Msa0567610 | 0.810856 | 9.362373e-51 | -8.615850e-47 |
| Msa0241750 | Msa0567610 | 0.813595 | 2.364330e-51 | -8.615850e-47 |
| Msa0246210 | Msa0567610 | 0.825306 | 5.038124e-54 | -8.615850e-47 |
| Msa0266460 | Msa0567610 | 0.805756 | 1.144615e-49 | -8.615850e-47 |
| Msa0269220 | Msa0567610 | -0.825234 | 5.238368e-54 | -8.615850e-47 |
| Msa0276850 | Msa0567610 | 0.806394 | 8.401771e-50 | -8.615850e-47 |
| Msa0276860 | Msa0567610 | 0.817162 | 3.805455e-52 | -8.615850e-47 |
| Msa0279000 | Msa0567610 | 0.822986 | 1.765580e-53 | -8.615850e-47 |
| Msa0284800 | Msa0567610 | 0.824357 | 8.434233e-54 | -8.615850e-47 |
| Msa0288620 | Msa0567610 | 0.818714 | 1.697004e-52 | -8.615850e-47 |
| Msa0309720 | Msa0567610 | 0.809032 | 2.311624e-50 | -8.615850e-47 |
| Msa0312740 | Msa0567610 | 0.816097 | 6.590357e-52 | -8.615850e-47 |
| Msa0326710 | Msa0567610 | 0.823453 | 1.373869e-53 | -8.615850e-47 |
| Msa0330520 | Msa0567610 | 0.841928 | 3.528121e-58 | -8.615850e-47 |
| Msa0341060 | Msa0567610 | -0.805402 | 1.358142e-49 | -8.615850e-47 |
| Msa0354840 | Msa0567610 | 0.814096 | 1.833542e-51 | -8.615850e-47 |
| Msa0489640 | Msa0567610 | 0.819172 | 1.335575e-52 | -8.615850e-47 |
| Msa0506750 | Msa0567610 | 0.812056 | 5.137510e-51 | -8.615850e-47 |
| Msa0520670 | Msa0567610 | 0.833372 | 5.538766e-56 | -8.615850e-47 |
| Msa0521510 | Msa0567610 | 0.820055 | 8.393601e-53 | -8.615850e-47 |
| Msa0521530 | Msa0567610 | 0.828952 | 6.751312e-55 | -8.615850e-47 |
| Msa0525880 | Msa0567610 | 0.800647 | 1.306247e-48 | -8.615850e-47 |
| Msa0532160 | Msa0567610 | 0.819839 | 9.405889e-53 | -8.615850e-47 |
| Msa0545920 | Msa0567610 | 0.806353 | 8.572984e-50 | -8.615850e-47 |
| Msa0567610 | Msa0572830 | 0.803801 | 2.931077e-49 | -8.615850e-47 |
| Msa0567610 | Msa0574900 | 0.805510 | 1.289104e-49 | -8.615850e-47 |
| Msa0567610 | Msa0601720 | 0.802239 | 6.163945e-49 | -8.615850e-47 |
| Msa0567610 | Msa0610700 | -0.833040 | 6.699775e-56 | -8.615850e-47 |
| Msa0567610 | Msa0630440 | 0.850059 | 2.168346e-60 | -8.615850e-47 |
| Msa0567610 | Msa0657110 | -0.826943 | 2.055889e-54 | -8.615850e-47 |
| Msa0567610 | Msa0661480 | 0.801711 | 7.914745e-49 | -8.615850e-47 |
| Msa0567610 | Msa0681050 | 0.803715 | 3.054170e-49 | -8.615850e-47 |
| Msa0567610 | Msa0689830 | 0.844870 | 5.783273e-59 | -8.615850e-47 |
| Msa0567610 | Msa0701090 | -0.827045 | 1.942912e-54 | -8.615850e-47 |
| Msa0567610 | Msa0701890 | 0.807021 | 6.194864e-50 | -8.615850e-47 |
| Msa0567610 | Msa0703950 | 0.907931 | 2.971132e-81 | -8.615850e-47 |
| Msa0567610 | Msa0707360 | 0.803091 | 4.112137e-49 | -8.615850e-47 |
| Msa0567610 | Msa0719270 | 0.856259 | 3.630399e-62 | -8.615850e-47 |
| Msa0567610 | Msa0726170 | -0.823704 | 1.200290e-53 | -8.615850e-47 |
| Msa0567610 | Msa0733080 | 0.857227 | 1.884401e-62 | -8.615850e-47 |
| Msa0567610 | Msa0745140 | 0.859308 | 4.524915e-63 | -8.615850e-47 |
| Msa0567610 | Msa0746650 | 0.809342 | 1.984515e-50 | -8.615850e-47 |
| Msa0567610 | Msa0761720 | 0.809140 | 2.191645e-50 | -8.615850e-47 |
| Msa0567610 | Msa0765110 | 0.805833 | 1.103062e-49 | -8.615850e-47 |
| Msa0567610 | Msa0765960 | -0.803894 | 2.802984e-49 | -8.615850e-47 |
| Msa0567610 | Msa0776640 | 0.858876 | 6.096713e-63 | -8.615850e-47 |
| Msa0567610 | Msa0802760 | 0.815806 | 7.652675e-52 | -8.615850e-47 |
| Msa0567610 | Msa0813160 | 0.813002 | 3.190693e-51 | -8.615850e-47 |
| Msa0567610 | Msa0825920 | 0.856729 | 2.641555e-62 | -8.615850e-47 |
| Msa0567610 | Msa0827370 | 0.801903 | 7.227760e-49 | -8.615850e-47 |
| Msa0567610 | Msa0831740 | 0.802872 | 4.564197e-49 | -8.615850e-47 |
| Msa0567610 | Msa0831800 | 0.824106 | 9.662334e-54 | -8.615850e-47 |
| Msa0567610 | Msa0840520 | 0.860500 | 1.977778e-63 | -8.615850e-47 |
| Msa0567610 | Msa0841050 | 0.800920 | 1.149264e-48 | -8.615850e-47 |
| Msa0567610 | Msa0851850 | 0.827967 | 1.167336e-54 | -8.615850e-47 |
| Msa0567610 | Msa0865420 | 0.854628 | 1.084753e-61 | -8.615850e-47 |
| Msa0567610 | Msa0865450 | 0.808768 | 2.633531e-50 | -8.615850e-47 |
| Msa0567610 | Msa0866530 | 0.817773 | 2.771538e-52 | -8.615850e-47 |
| Msa0567610 | Msa0903340 | 0.816897 | 4.363126e-52 | -8.615850e-47 |
| Msa0567610 | Msa0908270 | -0.800870 | 1.176680e-48 | -8.615850e-47 |
| Msa0567610 | Msa0926310 | 0.813284 | 2.766549e-51 | -8.615850e-47 |
| Msa0567610 | Msa0982730 | 0.805692 | 1.180584e-49 | -8.615850e-47 |
| Msa0567610 | Msa1019200 | 0.812574 | 3.959123e-51 | -8.615850e-47 |
| Msa0567610 | Msa1022420 | 0.809783 | 1.594954e-50 | -8.615850e-47 |
| Msa0567610 | Msa1044250 | 0.814354 | 1.607703e-51 | -8.615850e-47 |
| Msa0567610 | Msa1050260 | 0.823725 | 1.186747e-53 | -8.615850e-47 |
| Msa0567610 | Msa1078760 | -0.800373 | 1.485867e-48 | -8.615850e-47 |
| Msa0567610 | Msa1082410 | 0.811377 | 7.216098e-51 | -8.615850e-47 |
| Msa0567610 | Msa1106590 | 0.832608 | 8.576762e-56 | -8.615850e-47 |
| Msa0567610 | Msa1124210 | 0.806749 | 7.070358e-50 | -8.615850e-47 |
| Msa0567610 | Msa1145300 | 0.811304 | 7.487689e-51 | -8.615850e-47 |
| Msa0567610 | Msa1147700 | 0.832508 | 9.082370e-56 | -8.615850e-47 |
| Msa0567610 | Msa1149910 | 0.818953 | 1.497977e-52 | -8.615850e-47 |
| Msa0567610 | Msa1192360 | 0.819831 | 9.446502e-53 | -8.615850e-47 |
| Msa0567610 | Msa1201780 | 0.808408 | 3.142307e-50 | -8.615850e-47 |
| Msa0567610 | Msa1206040 | 0.816139 | 6.449088e-52 | -8.615850e-47 |
| Msa0567610 | Msa1228580 | 0.801443 | 8.981864e-49 | -8.615850e-47 |
| Msa0567610 | Msa1279120 | 0.803420 | 3.515728e-49 | -8.615850e-47 |
| Msa0567610 | Msa1297070 | 0.800915 | 1.151989e-48 | -8.615850e-47 |
| Msa0567610 | Msa1328870 | 0.820334 | 7.247969e-53 | -8.615850e-47 |
| Msa0567610 | Msa1347390 | 0.812882 | 3.389564e-51 | -8.615850e-47 |
| Msa0567610 | Msa1349690 | 0.802044 | 6.761068e-49 | -8.615850e-47 |
| Msa0567610 | Msa1365820 | 0.827058 | 1.928810e-54 | -8.615850e-47 |
| Msa0567610 | Msa1366140 | -0.823711 | 1.195409e-53 | -8.615850e-47 |
| Msa0567610 | Msa1366150 | 0.806657 | 7.394479e-50 | -8.615850e-47 |
| Msa0567610 | Msa1368390 | 0.815610 | 8.464948e-52 | -8.615850e-47 |
| Msa0567610 | Msa1372000 | 0.840836 | 6.840371e-58 | -8.615850e-47 |
| Msa0567610 | Msa1387450 | -0.822763 | 1.990446e-53 | -8.615850e-47 |
| Msa0567610 | Msa1389820 | 0.813470 | 2.518361e-51 | -8.615850e-47 |
| Msa0567610 | Msa1393560 | 0.804948 | 1.690147e-49 | -8.615850e-47 |
| Msa0567610 | Msa1398810 | 0.806363 | 8.529318e-50 | -8.615850e-47 |
| Msa0567610 | Msa1399190 | 0.806444 | 8.201111e-50 | -8.615850e-47 |
| Msa0567610 | Msa1402010 | 0.815996 | 6.943036e-52 | -8.615850e-47 |
| Msa0567610 | Msa1406090 | 0.817619 | 3.001438e-52 | -8.615850e-47 |
| Msa0567610 | Msa1407840 | 0.912833 | 1.237099e-83 | -8.615850e-47 |
| Msa0567610 | Msa1413130 | 0.801285 | 9.678384e-49 | -8.615850e-47 |
| Msa0567610 | Msa1422860 | 0.812073 | 5.093181e-51 | -8.615850e-47 |
| Msa0567610 | Msa1436620 | 0.857265 | 1.836150e-62 | -8.615850e-47 |
| Msa0567610 | Msa1437810 | 0.913234 | 7.793913e-84 | -8.615850e-47 |
| Msa0567610 | Msa1454500 | 0.922139 | 1.449049e-88 | -8.615850e-47 |
| Msa0567610 | Msa1457770 | 0.808391 | 3.168962e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567610 | MtrunA17_Chr8g0382301 | 99.834 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0 | 1250 |
| Msa0567610 | MtrunA17_Chr3g0134531 | 51.532 | 555 | 255 | 6 | 8 | 556 | 36 | 582 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567610 | AT5G10200.3 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| Msa0567610 | AT5G10200.1 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| Msa0567610 | AT5G10200.2 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| Msa0567610 | AT5G43120.2 | 45.361 | 582 | 294 | 9 | 11 | 581 | 23 | 591 | 2.65e-174 | 508 |
| Msa0567610 | AT5G43120.1 | 46.570 | 554 | 272 | 9 | 11 | 553 | 23 | 563 | 1.30e-173 | 506 |
| Msa0567610 | AT3G50030.1 | 43.173 | 542 | 246 | 8 | 8 | 544 | 9 | 493 | 3.70e-139 | 414 |
Find 191 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATCTGGAAATATTTC+TGG | 0.102747 | 4_1:-68886901 | Msa0567610:CDS |
| TTTACCTTGTGACATGTATT+TGG | 0.178349 | 4_1:+68887913 | None:intergenic |
| TTTACACTTGACACAAAATA+TGG | 0.186042 | 4_1:+68885506 | Msa0567600:intron |
| TAACGAACTCAAGATAATTT+AGG | 0.221345 | 4_1:+68885392 | Msa0567600:intron |
| AATAAGGAATGTATATATTT+TGG | 0.230293 | 4_1:+68888592 | None:intergenic |
| AACTAATCGCTCAGCGTAAT+CGG | 0.242598 | 4_1:+68886567 | None:intergenic |
| GTTAGCAAAAGAAAGTTTAT+TGG | 0.248766 | 4_1:-68886662 | Msa0567610:CDS |
| CCAAGGAACTCATTGCTAAT+TGG | 0.253973 | 4_1:+68888352 | None:intergenic |
| TGCTCGCCTCCAGAGACTTT+TGG | 0.259141 | 4_1:+68886705 | None:intergenic |
| ATTCCCAGCTCTATGAATTC+AGG | 0.267825 | 4_1:+68888678 | None:intergenic |
| CACCACCGTCACCCTGATTA+TGG | 0.279873 | 4_1:+68886485 | None:intergenic |
| GTTCGAAGCAGAGATTAAAA+TGG | 0.285308 | 4_1:-68887002 | Msa0567610:CDS |
| TAGGACAAAACTTTAATAAA+AGG | 0.299069 | 4_1:-68886340 | Msa0567610:intron |
| GAGAACAACTCTCTCCTTCT+TGG | 0.301124 | 4_1:+68886831 | None:intergenic |
| ATGATATGAGCTGCATAATA+AGG | 0.301312 | 4_1:+68888576 | None:intergenic |
| TGGCTATTGATTGTCTTCTA+TGG | 0.301791 | 4_1:-68887948 | Msa0567610:CDS |
| TTCTCCCTATCAGTGGTCTT+TGG | 0.309537 | 4_1:-68888728 | Msa0567610:CDS |
| GACAGCTAGTGAAAGTGATA+TGG | 0.315697 | 4_1:-68886425 | Msa0567610:CDS |
| GCATGGTGGCGTCCATAATC+AGG | 0.330107 | 4_1:-68886497 | Msa0567610:CDS |
| CTTAATATGTAGATCTTCCT+TGG | 0.340124 | 4_1:+68886966 | None:intergenic |
| TGGTTCCTACACAATGAATA+TGG | 0.343437 | 4_1:-68888553 | Msa0567610:CDS |
| TTCAGATGATTGGCAGTATA+TGG | 0.344104 | 4_1:-68887968 | Msa0567610:CDS |
| TTTACCAATATGTTGATAGA+AGG | 0.350454 | 4_1:-68888311 | Msa0567610:CDS |
| GAGGGTAGCAGTTAGAGCTT+TGG | 0.371302 | 4_1:-68888445 | Msa0567610:CDS |
| TATTATGCAGCTCATATCAT+TGG | 0.378316 | 4_1:-68888573 | Msa0567610:CDS |
| CGGCATGGGCGGTGTTGAAA+TGG | 0.381441 | 4_1:-68888259 | Msa0567610:CDS |
| TTAGCCTTCTATCAACATAT+TGG | 0.382403 | 4_1:+68888307 | None:intergenic |
| GAAAATTCACCAGCTGGTAT+TGG | 0.383617 | 4_1:-68888084 | Msa0567610:CDS |
| TTGGAGAACTACATGACATT+TGG | 0.384042 | 4_1:-68885471 | Msa0567610:three_prime_UTR |
| TAGAAATTCTTGCTTGCATA+TGG | 0.385235 | 4_1:+68888143 | None:intergenic |
| TATCAGTCGTTTATTGTAAG+TGG | 0.387958 | 4_1:-68885618 | Msa0567610:three_prime_UTR |
| GTCTAGGAAGGCCGAGGAAT+GGG | 0.391308 | 4_1:-68888235 | Msa0567610:CDS |
| CGAAATAGTTGGCGGAGATC+GGG | 0.392030 | 4_1:+68889745 | None:intergenic |
| AGGGTAGCAGTTAGAGCTTT+GGG | 0.392182 | 4_1:-68888444 | Msa0567610:CDS |
| CATATGGTAGGAAGAAATTC+CGG | 0.398197 | 4_1:+68888159 | None:intergenic |
| TTGCTCGCTCTTCAGATGAT+TGG | 0.408759 | 4_1:-68887978 | Msa0567610:CDS |
| GCGATGATGACGACGGTGAT+TGG | 0.412821 | 4_1:-68886387 | Msa0567610:CDS |
| TTCTAAGAGGTAGGTTGACT+TGG | 0.413383 | 4_1:-68888476 | Msa0567610:CDS |
| CTCGAGAATTTCACCGTGAC+TGG | 0.417747 | 4_1:+68888383 | None:intergenic |
| CCAATTAGCAATGAGTTCCT+TGG | 0.422140 | 4_1:-68888352 | Msa0567610:CDS |
| CACAATGCTTCAATAATTCC+AGG | 0.425354 | 4_1:+68888006 | None:intergenic |
| ACTAATCGCTCAGCGTAATC+GGG | 0.426153 | 4_1:+68886568 | None:intergenic |
| ATCGTCATGCCAAAAGTCTC+TGG | 0.426995 | 4_1:-68886714 | Msa0567610:CDS |
| AATGCATGTCTGCTCTCATA+TGG | 0.429025 | 4_1:-68888650 | Msa0567610:CDS |
| ACACTTGCTCTGCGTTTGCT+TGG | 0.430357 | 4_1:+68888798 | None:intergenic |
| GTGTTCCAAAGACCACTGAT+AGG | 0.430593 | 4_1:+68888723 | None:intergenic |
| GCGAAATAGTTGGCGGAGAT+CGG | 0.436537 | 4_1:+68889744 | None:intergenic |
| AAATATTTCCAGATGAGAAA+AGG | 0.437915 | 4_1:+68886905 | None:intergenic |
| TTACACTTGACACAAAATAT+GGG | 0.445950 | 4_1:+68885507 | Msa0567600:intron |
| TGCACGGGTAGCATCACTTA+TGG | 0.449721 | 4_1:+68886759 | None:intergenic |
| CGACGATGACAGGAAAGAAT+AGG | 0.453401 | 4_1:-68886359 | Msa0567610:exon |
| TTGACATGGTAATCCTTCCT+TGG | 0.456528 | 4_1:-68885728 | Msa0567610:three_prime_UTR |
| GGACCTGTTGCTAGTTGCCC+TGG | 0.461427 | 4_1:-68888024 | Msa0567610:CDS |
| GGTGACGGTGGTGATATATA+TGG | 0.463445 | 4_1:-68886475 | Msa0567610:CDS |
| GAGAACTACATGACATTTGG+AGG | 0.464015 | 4_1:-68885468 | Msa0567610:three_prime_UTR |
| GACAGGACACTTCACTGTTC+CGG | 0.468413 | 4_1:+68889953 | None:intergenic |
| GAGTTGTTCTCTATAGCAAT+CGG | 0.470290 | 4_1:-68886819 | Msa0567610:CDS |
| TGTAGAGTTGGAACAGTCAC+AGG | 0.472925 | 4_1:+68885667 | Msa0567600:CDS |
| CCTTTAGTTGAGCTTCTAAG+AGG | 0.473520 | 4_1:-68888489 | Msa0567610:CDS |
| TATGTAGGTAATTGATAAAG+TGG | 0.475329 | 4_1:-68887184 | Msa0567610:intron |
| GCACTGGTTGTCAAGCTTGA+AGG | 0.477662 | 4_1:-68886934 | Msa0567610:CDS |
| AATATTTCCAGATGAGAAAA+GGG | 0.478637 | 4_1:+68886906 | None:intergenic |
| GTTAATGAAAATTCACCAGC+TGG | 0.484392 | 4_1:-68888090 | Msa0567610:CDS |
| TGACCCTGAATTCATAGAGC+TGG | 0.484686 | 4_1:-68888682 | Msa0567610:CDS |
| TTCGAAGCAGAGATTAAAAT+GGG | 0.485000 | 4_1:-68887001 | Msa0567610:CDS |
| AGAGATCAGGATCATTTGAC+TGG | 0.487652 | 4_1:+68886611 | None:intergenic |
| TATTAAGCAGGCTGCAGCAC+TGG | 0.488628 | 4_1:-68886950 | Msa0567610:CDS |
| TTCCCAGCTCTATGAATTCA+GGG | 0.490784 | 4_1:+68888679 | None:intergenic |
| ATTCCAGGGCAACTAGCAAC+AGG | 0.491637 | 4_1:+68888021 | None:intergenic |
| CATTCCGAGTCATCAGTCTC+TGG | 0.491761 | 4_1:+68886451 | None:intergenic |
| CAAAAGAAGCATCCTGGGTA+TGG | 0.491996 | 4_1:+68888840 | None:intergenic |
| TTAATATGTAGATCTTCCTT+GGG | 0.495234 | 4_1:+68886967 | None:intergenic |
| GATGAAACTTTATCCATGCT+TGG | 0.495707 | 4_1:+68888870 | None:intergenic |
| GTGTCAAGATGATGATGGTC+AGG | 0.496111 | 4_1:-68888751 | Msa0567610:CDS |
| GGGCTAGCCAACTGCAATGT+TGG | 0.498049 | 4_1:-68888215 | Msa0567610:CDS |
| TGCATCGAGACACAAGGGTC+GGG | 0.498166 | 4_1:-68887075 | Msa0567610:CDS |
| TCTATGAATTCAGGGTCATT+CGG | 0.498186 | 4_1:+68888687 | None:intergenic |
| ACAATTTGTCATCAGAAGCT+TGG | 0.499520 | 4_1:-68888051 | Msa0567610:CDS |
| GAAAGTGATATGGGAAATGA+TGG | 0.499970 | 4_1:-68886415 | Msa0567610:CDS |
| CTGCATGAACGAAGCAGAGT+TGG | 0.501333 | 4_1:-68885692 | Msa0567610:three_prime_UTR |
| TGATCTTCTTACACGCGGCA+TGG | 0.501426 | 4_1:-68888274 | Msa0567610:CDS |
| TGAAGTGGTTTACTTGCTTG+AGG | 0.503804 | 4_1:-68888943 | Msa0567610:five_prime_UTR |
| AGAGACTGATGACTCGGAAT+GGG | 0.505401 | 4_1:-68886449 | Msa0567610:CDS |
| CTGTTGTAATTGACCAAGCA+TGG | 0.506602 | 4_1:-68888883 | Msa0567610:exon |
| ATGACACAAAAGAAGCATCC+TGG | 0.509285 | 4_1:+68888834 | None:intergenic |
| ACAGCTAGTGAAAGTGATAT+GGG | 0.510559 | 4_1:-68886424 | Msa0567610:CDS |
| CAACTCTGCTTCGTTCATGC+AGG | 0.510702 | 4_1:+68885693 | Msa0567600:CDS |
| CTCTCCTTCTTGGATCTCAT+AGG | 0.510858 | 4_1:+68886841 | None:intergenic |
| TTCACCGTGACTGGCTAAAG+TGG | 0.511711 | 4_1:+68888392 | None:intergenic |
| GAGATGAAGACAACGGAAAG+TGG | 0.512535 | 4_1:+68889902 | None:intergenic |
| GGCTAAAGTGGGAAAAGTGC+TGG | 0.517032 | 4_1:+68888404 | None:intergenic |
| GAACAGTGAAGTGTCCTGTC+GGG | 0.520223 | 4_1:-68889950 | Msa0567610:five_prime_UTR |
| GTTGACTTGGGTTGAGCAGA+GGG | 0.523039 | 4_1:-68888463 | Msa0567610:CDS |
| CAGAGACTGATGACTCGGAA+TGG | 0.524761 | 4_1:-68886450 | Msa0567610:CDS |
| GAGAACATTTGCACCAAGGA+AGG | 0.529963 | 4_1:+68885715 | Msa0567600:CDS |
| GACCCTGAATTCATAGAGCT+GGG | 0.530003 | 4_1:-68888681 | Msa0567610:CDS |
| AGAAGCAGATGCGTGCTGCT+TGG | 0.530091 | 4_1:-68886543 | Msa0567610:CDS |
| CTTAATAAGCCAATACCAGC+TGG | 0.532024 | 4_1:+68888075 | None:intergenic |
| ATTGGAATAACGACGATGAC+AGG | 0.533512 | 4_1:-68886369 | Msa0567610:CDS |
| GGAAGATCTACATATTAAGC+AGG | 0.534911 | 4_1:-68886962 | Msa0567610:CDS |
| TTCTTCCATATTCATTGTGT+AGG | 0.537968 | 4_1:+68888548 | None:intergenic |
| TTTGTCATCAGAAGCTTGGT+AGG | 0.539277 | 4_1:-68888047 | Msa0567610:CDS |
| GCACAAGCTTATGACATGCT+AGG | 0.540972 | 4_1:-68886685 | Msa0567610:CDS |
| CTTCTTACACGCGGCATGGG+CGG | 0.541650 | 4_1:-68888270 | Msa0567610:CDS |
| TCCGCAAGGTCAACTAATGC+AGG | 0.542050 | 4_1:+68887159 | None:intergenic |
| CCTCTTAGAAGCTCAACTAA+AGG | 0.542272 | 4_1:+68888489 | None:intergenic |
| GATCTTCTTACACGCGGCAT+GGG | 0.543576 | 4_1:-68888273 | Msa0567610:CDS |
| TCTAAGAGGTAGGTTGACTT+GGG | 0.544283 | 4_1:-68888475 | Msa0567610:CDS |
| ATCAAAATACTCAGAAGCAT+TGG | 0.544343 | 4_1:-68886872 | Msa0567610:CDS |
| AATGCTACAGAATGTAGAGT+TGG | 0.544804 | 4_1:+68885655 | Msa0567600:intron |
| GATATGGGAAATGATGGAAT+TGG | 0.544935 | 4_1:-68886409 | Msa0567610:CDS |
| CACAAGCTTATGACATGCTA+GGG | 0.553569 | 4_1:-68886684 | Msa0567610:CDS |
| TTGTCATCAGAAGCTTGGTA+GGG | 0.554096 | 4_1:-68888046 | Msa0567610:CDS |
| TGCTGCTTGGTTATTTCGAG+AGG | 0.554603 | 4_1:-68886530 | Msa0567610:CDS |
| TAACAAAACTACCTGGCATG+TGG | 0.556418 | 4_1:-68888122 | Msa0567610:CDS |
| AACAAAACTACCTGGCATGT+GGG | 0.557380 | 4_1:-68888121 | Msa0567610:CDS |
| ACAAGACCACCCCACATGCC+AGG | 0.559253 | 4_1:+68888111 | None:intergenic |
| AGTCTAGGAAGGCCGAGGAA+TGG | 0.560531 | 4_1:-68888236 | Msa0567610:CDS |
| GAAATAGTTGGCGGAGATCG+GGG | 0.562521 | 4_1:+68889746 | None:intergenic |
| TAACACTGAAGCGAAATAGT+TGG | 0.562725 | 4_1:+68889734 | None:intergenic |
| CAAGATTGCATCGAGACACA+AGG | 0.563325 | 4_1:-68887081 | Msa0567610:CDS |
| AGTTGTTCTCTATAGCAATC+GGG | 0.563923 | 4_1:-68886818 | Msa0567610:CDS |
| CGGAAAGTGGAAACATGAGA+TGG | 0.566239 | 4_1:+68889915 | None:intergenic |
| TCGCACTAAAGAACAGATAG+AGG | 0.568924 | 4_1:-68887034 | Msa0567610:CDS |
| AGAGATTCAATTGAATTCAA+CGG | 0.568983 | 4_1:+68889689 | None:intergenic |
| CTTGCGGAGATTACAACTCT+AGG | 0.571036 | 4_1:-68887144 | Msa0567610:CDS |
| TGTTCCAAAGACCACTGATA+GGG | 0.571674 | 4_1:+68888724 | None:intergenic |
| AATCTCTCTCACTCTCTCAC+AGG | 0.572570 | 4_1:-68889673 | Msa0567610:intron |
| ATCTTGAAGAACACTGACAA+TGG | 0.574244 | 4_1:+68887098 | None:intergenic |
| TGTCATCAGAAGCTTGGTAG+GGG | 0.574943 | 4_1:-68888045 | Msa0567610:CDS |
| TAGTTGAGCTTCTAAGAGGT+AGG | 0.575441 | 4_1:-68888485 | Msa0567610:CDS |
| GTCTGTGGAGACATAGTGCA+CGG | 0.575568 | 4_1:+68886743 | None:intergenic |
| GGCGTCCATAATCAGGGTGA+CGG | 0.576294 | 4_1:-68886490 | Msa0567610:CDS |
| CACTGAAGCGAAATAGTTGG+CGG | 0.577667 | 4_1:+68889737 | None:intergenic |
| GCAGAAAGTTCTGTGCATGC+TGG | 0.577817 | 4_1:-68888522 | Msa0567610:CDS |
| CACTGTGATCTTCTTACACG+CGG | 0.580191 | 4_1:-68888279 | Msa0567610:CDS |
| TGACACAAAAGAAGCATCCT+GGG | 0.582906 | 4_1:+68888835 | None:intergenic |
| AATTCTTGCTTGCATATGGT+AGG | 0.583132 | 4_1:+68888147 | None:intergenic |
| GGGTGTGTTTACTACCCGAC+AGG | 0.584271 | 4_1:+68889936 | None:intergenic |
| CGAGAGGCAGCTGTTAAGCA+TGG | 0.584903 | 4_1:-68886514 | Msa0567610:CDS |
| GGTTGACTTGGGTTGAGCAG+AGG | 0.586421 | 4_1:-68888464 | Msa0567610:CDS |
| TACACTTGACACAAAATATG+GGG | 0.587633 | 4_1:+68885508 | Msa0567600:intron |
| CTTAGAAGCTCAACTAAAGG+AGG | 0.588830 | 4_1:+68888492 | None:intergenic |
| GAAGAGACCAACATTGCAGT+TGG | 0.590523 | 4_1:+68888208 | None:intergenic |
| CATGGTGGCGTCCATAATCA+GGG | 0.591600 | 4_1:-68886496 | Msa0567610:CDS |
| AAGCATGGATAAAGTTTCAT+CGG | 0.592980 | 4_1:-68888868 | Msa0567610:exon |
| GCGGTGTTGAAATGGAGTCT+AGG | 0.598414 | 4_1:-68888251 | Msa0567610:CDS |
| CAGTTGGCTAGCCCATTCCT+CGG | 0.603223 | 4_1:+68888224 | None:intergenic |
| CTTCCGTGTCAAGATGATGA+TGG | 0.604349 | 4_1:-68888756 | Msa0567610:CDS |
| TTGCATCGAGACACAAGGGT+CGG | 0.605332 | 4_1:-68887076 | Msa0567610:CDS |
| TGTTGAAATGGAGTCTAGGA+AGG | 0.605706 | 4_1:-68888247 | Msa0567610:CDS |
| GTGTCCTATGAGATCCAAGA+AGG | 0.606913 | 4_1:-68886845 | Msa0567610:CDS |
| ACAATGCTTCAATAATTCCA+GGG | 0.608618 | 4_1:+68888007 | None:intergenic |
| AGAAGAACCTTGACTTGACA+TGG | 0.608964 | 4_1:-68885742 | Msa0567610:three_prime_UTR |
| GTGTGAATAAACTATTTCCA+AGG | 0.609966 | 4_1:+68888335 | None:intergenic |
| TTTCCCACTTTAGCCAGTCA+CGG | 0.611995 | 4_1:-68888396 | Msa0567610:CDS |
| TGAATACAATGTGCAACTTG+TGG | 0.612893 | 4_1:-68885766 | Msa0567610:three_prime_UTR |
| ACAAAACTACCTGGCATGTG+GGG | 0.615879 | 4_1:-68888120 | Msa0567610:CDS |
| GGTCAGGTTCTCCCTATCAG+TGG | 0.617990 | 4_1:-68888735 | Msa0567610:CDS |
| ATGTCTGCTCTCATATGGAA+AGG | 0.618281 | 4_1:-68888645 | Msa0567610:CDS |
| AATGGAGTCTAGGAAGGCCG+AGG | 0.620005 | 4_1:-68888241 | Msa0567610:CDS |
| GGAACAGTGAAGTGTCCTGT+CGG | 0.622731 | 4_1:-68889951 | Msa0567610:five_prime_UTR |
| AGGATTACCATGTCAAGTCA+AGG | 0.624459 | 4_1:+68885735 | Msa0567600:CDS |
| GAGAGAAGAGATGAAGACAA+CGG | 0.625849 | 4_1:+68889895 | None:intergenic |
| GCATCACTTATGGCAGCCAA+AGG | 0.625977 | 4_1:+68886769 | None:intergenic |
| TCACCGTGACTGGCTAAAGT+GGG | 0.627571 | 4_1:+68888393 | None:intergenic |
| GAGATCAGGATCATTTGACT+GGG | 0.629493 | 4_1:+68886612 | None:intergenic |
| AAATAGTTGGCGGAGATCGG+GGG | 0.630110 | 4_1:+68889747 | None:intergenic |
| AAGGACTGAAGAATCGACGC+TGG | 0.632880 | 4_1:-68888626 | Msa0567610:CDS |
| GGAAAGTGGAAACATGAGAT+GGG | 0.633440 | 4_1:+68889916 | None:intergenic |
| TGGTCCAGAGACTGATGACT+CGG | 0.634939 | 4_1:-68886455 | Msa0567610:CDS |
| AAACTACCTGGCATGTGGGG+TGG | 0.640971 | 4_1:-68888117 | Msa0567610:CDS |
| TGGTCTTTGGAACACAGCAA+TGG | 0.643301 | 4_1:-68888715 | Msa0567610:CDS |
| GAATTTCTAACAAAACTACC+TGG | 0.643669 | 4_1:-68888129 | Msa0567610:CDS |
| ATGGGAAAAGAATATGCCCA+AGG | 0.649974 | 4_1:-68886983 | Msa0567610:CDS |
| GTCCATAATCAGGGTGACGG+TGG | 0.652767 | 4_1:-68886487 | Msa0567610:CDS |
| TCATCGGACTGTCCATACCC+AGG | 0.655137 | 4_1:-68888852 | Msa0567610:CDS |
| CTAGAGTTGTAATCTCCGCA+AGG | 0.661496 | 4_1:+68887145 | None:intergenic |
| GCCTGCATTAGTTGACCTTG+CGG | 0.662681 | 4_1:-68887160 | Msa0567610:CDS |
| AGATCCAAATACATGTCACA+AGG | 0.671859 | 4_1:-68887917 | Msa0567610:intron |
| TCTGTGGAGACATAGTGCAC+GGG | 0.677330 | 4_1:+68886744 | None:intergenic |
| GAGGCAGCTGTTAAGCATGG+TGG | 0.678228 | 4_1:-68886511 | Msa0567610:CDS |
| GTCATGCCAAAAGTCTCTGG+AGG | 0.684030 | 4_1:-68886711 | Msa0567610:CDS |
| GCAGGAGAACATTTGCACCA+AGG | 0.684152 | 4_1:+68885711 | Msa0567600:CDS |
| AAGATTGCATCGAGACACAA+GGG | 0.684193 | 4_1:-68887080 | Msa0567610:CDS |
| CATGACGATTGACAGGTCTG+TGG | 0.690518 | 4_1:+68886728 | None:intergenic |
| TGACCATCATCATCTTGACA+CGG | 0.697231 | 4_1:+68888753 | None:intergenic |
| TCAACTAGTCAATTCACACA+AGG | 0.715456 | 4_1:+68888918 | None:intergenic |
| GGAATTGGCGATGATGACGA+CGG | 0.760960 | 4_1:-68886394 | Msa0567610:CDS |
| ATGATCCTGATCTCTCACTG+AGG | 0.765682 | 4_1:-68886603 | Msa0567610:CDS |
| AATTGACTAGTTGATCTGTG+AGG | 0.769276 | 4_1:-68888909 | Msa0567610:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATAAAACAAAGAA+AGG | + | chr4_1:68887853-68887872 | None:intergenic | 10.0% |
| !!! | ATATTATTTTATTGTGAAAA+TGG | - | chr4_1:68889489-68889508 | Msa0567610:intron | 10.0% |
| !! | AAATCTTAACCTAATAAAAA+TGG | - | chr4_1:68885467-68885486 | Msa0567610:three_prime_UTR | 15.0% |
| !! | AAGTAAATATGTAAAATCAT+AGG | - | chr4_1:68886017-68886036 | Msa0567610:intron | 15.0% |
| !! | ATGTAATTCAAACTTAATTT+GGG | - | chr4_1:68886195-68886214 | Msa0567610:intron | 15.0% |
| !!! | ATATTTTTTAGCAAAGAAAT+TGG | - | chr4_1:68886219-68886238 | Msa0567610:intron | 15.0% |
| !!! | AATAAGGAATGTATATATTT+TGG | + | chr4_1:68886736-68886755 | None:intergenic | 15.0% |
| !! | ATTCATTTAGAAATAAAAGT+AGG | - | chr4_1:68887667-68887686 | Msa0567610:intron | 15.0% |
| !! | TGTGATTATATATATTACTT+TGG | - | chr4_1:68889080-68889099 | Msa0567610:intron | 15.0% |
| !!! | GATAAGAATTATTTAAAGTT+TGG | + | chr4_1:68889317-68889336 | None:intergenic | 15.0% |
| !! | ATATAACAAAATATTGCAAT+AGG | + | chr4_1:68889473-68889492 | None:intergenic | 15.0% |
| !!! | TGTGATATTTTTGTCAATTT+CGG | + | chr4_1:68885540-68885559 | Msa0567600:intron | 20.0% |
| !! | TGAAAATTTATCGAATATTC+TGG | + | chr4_1:68885938-68885957 | None:intergenic | 20.0% |
| !!! | TATTGAAACATTTGATGATT+TGG | - | chr4_1:68886064-68886083 | Msa0567610:intron | 20.0% |
| !!! | ATTGAAACATTTGATGATTT+GGG | - | chr4_1:68886065-68886084 | Msa0567610:intron | 20.0% |
| !! | GATGTAATTCAAACTTAATT+TGG | - | chr4_1:68886194-68886213 | Msa0567610:intron | 20.0% |
| !! | ACTTTAATTCATCTAGAAAT+TGG | - | chr4_1:68887596-68887615 | Msa0567610:intron | 20.0% |
| !! | ATTAAACTAAAAACCAAACA+TGG | + | chr4_1:68887984-68888003 | None:intergenic | 20.0% |
| !! | TAGGACAAAACTTTAATAAA+AGG | - | chr4_1:68888985-68889004 | Msa0567610:intron | 20.0% |
| !! | TTTCAATTAATAATTTCCTG+CGG | - | chr4_1:68889011-68889030 | Msa0567610:intron | 20.0% |
| !! | AATATATATAATCACAAGCA+GGG | + | chr4_1:68889076-68889095 | None:intergenic | 20.0% |
| !! | TAATATATATAATCACAAGC+AGG | + | chr4_1:68889077-68889096 | None:intergenic | 20.0% |
| !! | GATTATATATATTACTTTGG+CGG | - | chr4_1:68889083-68889102 | Msa0567610:intron | 20.0% |
| !! | ATTATATATATTACTTTGGC+GGG | - | chr4_1:68889084-68889103 | Msa0567610:intron | 20.0% |
| !!! | AAGTTTCCTTTTTGTATTTT+TGG | - | chr4_1:68889885-68889904 | Msa0567610:five_prime_UTR | 20.0% |
| !!! | TTTTGATTAGTCAACATATT+TGG | - | chr4_1:68889957-68889976 | Msa0567610:five_prime_UTR | 20.0% |
| !!! | TATCATCGTCCATTTTTATT+AGG | + | chr4_1:68885479-68885498 | Msa0567600:intron | 25.0% |
| ! | TGACAAAAATATCACAAACT+TGG | - | chr4_1:68885544-68885563 | Msa0567610:three_prime_UTR | 25.0% |
| ! | AGAGATTCAATTGAATTCAA+CGG | + | chr4_1:68885639-68885658 | Msa0567600:intron | 25.0% |
| ! | AAAAAAAGTGAATGCTAGAT+TGG | + | chr4_1:68885715-68885734 | Msa0567600:CDS | 25.0% |
| !!! | ACTTTTTTTTTTGTTGCCAT+TGG | - | chr4_1:68885726-68885745 | Msa0567610:three_prime_UTR | 25.0% |
| ! | ACAACAAAAATGACAATAAC+TGG | + | chr4_1:68886259-68886278 | None:intergenic | 25.0% |
| !! | TTTACCAATATGTTGATAGA+AGG | - | chr4_1:68887014-68887033 | Msa0567610:CDS | 25.0% |
| !!! | TAATTGCTTTGCTTTTAAAC+CGG | - | chr4_1:68887147-68887166 | Msa0567610:CDS | 25.0% |
| ! | CATCTAAAAACATTGATGTA+TGG | - | chr4_1:68887889-68887908 | Msa0567610:intron | 25.0% |
| ! | ATGAAAGCAATGATCAAATA+AGG | + | chr4_1:68888034-68888053 | None:intergenic | 25.0% |
| ! | TATGTAGGTAATTGATAAAG+TGG | - | chr4_1:68888141-68888160 | Msa0567610:CDS | 25.0% |
| ! | TTAATATGTAGATCTTCCTT+GGG | + | chr4_1:68888361-68888380 | None:intergenic | 25.0% |
| ! | AATATTTCCAGATGAGAAAA+GGG | + | chr4_1:68888422-68888441 | None:intergenic | 25.0% |
| ! | AAATATTTCCAGATGAGAAA+AGG | + | chr4_1:68888423-68888442 | None:intergenic | 25.0% |
| ! | GTTAGCAAAAGAAAGTTTAT+TGG | - | chr4_1:68888663-68888682 | Msa0567610:CDS | 25.0% |
| ! | AAAAAGAAAGTGAAATGTTG+AGG | + | chr4_1:68889274-68889293 | None:intergenic | 25.0% |
| !!! | TTGTTCTAAAAACACACTTT+AGG | - | chr4_1:68889444-68889463 | Msa0567610:intron | 25.0% |
| ! | TTACACTTGACACAAAATAT+GGG | + | chr4_1:68889821-68889840 | None:intergenic | 25.0% |
| ! | TTTACACTTGACACAAAATA+TGG | + | chr4_1:68889822-68889841 | None:intergenic | 25.0% |
| !! | GTGTAAAAAATTGCAAGTTT+TGG | - | chr4_1:68889835-68889854 | Msa0567610:five_prime_UTR | 25.0% |
| ! | AAACTGCCAAAAATACAAAA+AGG | + | chr4_1:68889894-68889913 | None:intergenic | 25.0% |
| ! | TAACGAACTCAAGATAATTT+AGG | + | chr4_1:68889936-68889955 | None:intergenic | 25.0% |
| GTAACAAGAAAAAGTTGCAA+CGG | + | chr4_1:68885617-68885636 | Msa0567600:intron | 30.0% | |
| GTAGTGACTTATTTATAGCT+AGG | - | chr4_1:68885868-68885887 | Msa0567610:intron | 30.0% | |
| ! | CTAGATTTTATACGTCGAAA+AGG | + | chr4_1:68886285-68886304 | None:intergenic | 30.0% |
| GACGTATAAAATCTAGAGAT+GGG | - | chr4_1:68886289-68886308 | Msa0567610:intron | 30.0% | |
| TATAAAATCTAGAGATGGGT+TGG | - | chr4_1:68886293-68886312 | Msa0567610:intron | 30.0% | |
| ACTGCATATAAGTAACATAC+TGG | + | chr4_1:68886360-68886379 | None:intergenic | 30.0% | |
| !!! | ACTTATATGCAGTTTTGAAG+TGG | - | chr4_1:68886367-68886386 | Msa0567610:CDS | 30.0% |
| AAGCATGGATAAAGTTTCAT+CGG | - | chr4_1:68886457-68886476 | Msa0567610:CDS | 30.0% | |
| ATGATATGAGCTGCATAATA+AGG | + | chr4_1:68886752-68886771 | None:intergenic | 30.0% | |
| TATTATGCAGCTCATATCAT+TGG | - | chr4_1:68886752-68886771 | Msa0567610:CDS | 30.0% | |
| TTCTTCCATATTCATTGTGT+AGG | + | chr4_1:68886780-68886799 | None:intergenic | 30.0% | |
| GTGTGAATAAACTATTTCCA+AGG | + | chr4_1:68886993-68887012 | None:intergenic | 30.0% | |
| ! | TTAGCCTTCTATCAACATAT+TGG | + | chr4_1:68887021-68887040 | None:intergenic | 30.0% |
| TAGAAATTCTTGCTTGCATA+TGG | + | chr4_1:68887185-68887204 | None:intergenic | 30.0% | |
| GAATTTCTAACAAAACTACC+TGG | - | chr4_1:68887196-68887215 | Msa0567610:intron | 30.0% | |
| ACAATGCTTCAATAATTCCA+GGG | + | chr4_1:68887321-68887340 | None:intergenic | 30.0% | |
| TTTACCTTGTGACATGTATT+TGG | + | chr4_1:68887415-68887434 | None:intergenic | 30.0% | |
| ! | AAGAGTGCAAATGAATACAT+TGG | + | chr4_1:68887489-68887508 | None:intergenic | 30.0% |
| ATTTGCACTCTTGAACATTA+AGG | - | chr4_1:68887497-68887516 | Msa0567610:intron | 30.0% | |
| ATGTATATATCTCGTAGTGA+AGG | + | chr4_1:68887733-68887752 | None:intergenic | 30.0% | |
| ! | TTCTGTTTCTTAGTGTGAAA+AGG | - | chr4_1:68887777-68887796 | Msa0567610:intron | 30.0% |
| CTTAAACTTAGTTATCACTG+CGG | - | chr4_1:68887948-68887967 | Msa0567610:CDS | 30.0% | |
| AAAGCAATGATCAAATAAGG+AGG | + | chr4_1:68888031-68888050 | None:intergenic | 30.0% | |
| ATTTGTTTACTTTAACGCCT+TGG | - | chr4_1:68888111-68888130 | Msa0567610:CDS | 30.0% | |
| TACCTACATAATATATGCCA+AGG | + | chr4_1:68888131-68888150 | None:intergenic | 30.0% | |
| TTCGAAGCAGAGATTAAAAT+GGG | - | chr4_1:68888324-68888343 | Msa0567610:CDS | 30.0% | |
| CTTAATATGTAGATCTTCCT+TGG | + | chr4_1:68888362-68888381 | None:intergenic | 30.0% | |
| TTCTCATCTGGAAATATTTC+TGG | - | chr4_1:68888424-68888443 | Msa0567610:CDS | 30.0% | |
| ! | ATCAAAATACTCAGAAGCAT+TGG | - | chr4_1:68888453-68888472 | Msa0567610:CDS | 30.0% |
| TTTCAAAGATGCAAATCCAT+TGG | + | chr4_1:68889128-68889147 | None:intergenic | 30.0% | |
| TGCAAGTAGAGAACATAATA+TGG | + | chr4_1:68889204-68889223 | None:intergenic | 30.0% | |
| !! | TGTAGAAAGCAACTTGTTTT+CGG | + | chr4_1:68889417-68889436 | None:intergenic | 30.0% |
| ! | GAAATCAAAGTGTCAAAACA+AGG | + | chr4_1:68889522-68889541 | None:intergenic | 30.0% |
| TATCAGTCGTTTATTGTAAG+TGG | - | chr4_1:68889707-68889726 | Msa0567610:five_prime_UTR | 30.0% | |
| ! | CTAAAAGTGACTACAGTTTT+TGG | - | chr4_1:68889734-68889753 | Msa0567610:five_prime_UTR | 30.0% |
| TACACTTGACACAAAATATG+GGG | + | chr4_1:68889820-68889839 | None:intergenic | 30.0% | |
| TAACACTGAAGCGAAATAGT+TGG | + | chr4_1:68885594-68885613 | Msa0567600:intron | 35.0% | |
| GAACTTGAATTGACTAAACG+TGG | - | chr4_1:68885835-68885854 | Msa0567610:intron | 35.0% | |
| ! | GTTTCTTACACTCACTGTTT+TGG | - | chr4_1:68885988-68886007 | Msa0567610:intron | 35.0% |
| CGACGTATAAAATCTAGAGA+TGG | - | chr4_1:68886288-68886307 | Msa0567610:intron | 35.0% | |
| TCAACTAGTCAATTCACACA+AGG | + | chr4_1:68886410-68886429 | None:intergenic | 35.0% | |
| ! | AATTGACTAGTTGATCTGTG+AGG | - | chr4_1:68886416-68886435 | Msa0567610:CDS | 35.0% |
| GATGAAACTTTATCCATGCT+TGG | + | chr4_1:68886458-68886477 | None:intergenic | 35.0% | |
| ! | ATGCTTCTTTTGTGTCATGA+AGG | - | chr4_1:68886496-68886515 | Msa0567610:CDS | 35.0% |
| TCTATGAATTCAGGGTCATT+CGG | + | chr4_1:68886641-68886660 | None:intergenic | 35.0% | |
| TGGTTCCTACACAATGAATA+TGG | - | chr4_1:68886772-68886791 | Msa0567610:CDS | 35.0% | |
| CATATGGTAGGAAGAAATTC+CGG | + | chr4_1:68887169-68887188 | None:intergenic | 35.0% | |
| AATTCTTGCTTGCATATGGT+AGG | + | chr4_1:68887181-68887200 | None:intergenic | 35.0% | |
| GTTAATGAAAATTCACCAGC+TGG | - | chr4_1:68887235-68887254 | Msa0567610:intron | 35.0% | |
| ACAATTTGTCATCAGAAGCT+TGG | - | chr4_1:68887274-68887293 | Msa0567610:intron | 35.0% | |
| CACAATGCTTCAATAATTCC+AGG | + | chr4_1:68887322-68887341 | None:intergenic | 35.0% | |
| TTCAGATGATTGGCAGTATA+TGG | - | chr4_1:68887357-68887376 | Msa0567610:intron | 35.0% | |
| ! | TGGCTATTGATTGTCTTCTA+TGG | - | chr4_1:68887377-68887396 | Msa0567610:intron | 35.0% |
| AGATCCAAATACATGTCACA+AGG | - | chr4_1:68887408-68887427 | Msa0567610:intron | 35.0% | |
| GAACAAATGCAAGGTTACAA+AGG | + | chr4_1:68887438-68887457 | None:intergenic | 35.0% | |
| ! | AAATTGGCTTAGCATGTGAA+TGG | - | chr4_1:68887612-68887631 | Msa0567610:intron | 35.0% |
| ! | CAGTCTGTAGCTTTTCATTT+AGG | - | chr4_1:68887701-68887720 | Msa0567610:intron | 35.0% |
| TATATACATATCACACCGCT+TGG | - | chr4_1:68887744-68887763 | Msa0567610:intron | 35.0% | |
| ACTCAACAGTCTACAGAAAT+CGG | + | chr4_1:68888067-68888086 | None:intergenic | 35.0% | |
| CTAGGTGATCATAAAAAGCT+TGG | - | chr4_1:68888199-68888218 | Msa0567610:CDS | 35.0% | |
| ATCTTGAAGAACACTGACAA+TGG | + | chr4_1:68888230-68888249 | None:intergenic | 35.0% | |
| GTTCGAAGCAGAGATTAAAA+TGG | - | chr4_1:68888323-68888342 | Msa0567610:CDS | 35.0% | |
| GGAAGATCTACATATTAAGC+AGG | - | chr4_1:68888363-68888382 | Msa0567610:CDS | 35.0% | |
| GAGTTGTTCTCTATAGCAAT+CGG | - | chr4_1:68888506-68888525 | Msa0567610:CDS | 35.0% | |
| AGTTGTTCTCTATAGCAATC+GGG | - | chr4_1:68888507-68888526 | Msa0567610:CDS | 35.0% | |
| ACAGCTAGTGAAAGTGATAT+GGG | - | chr4_1:68888901-68888920 | Msa0567610:five_prime_UTR | 35.0% | |
| GAAAGTGATATGGGAAATGA+TGG | - | chr4_1:68888910-68888929 | Msa0567610:five_prime_UTR | 35.0% | |
| ! | GATATGGGAAATGATGGAAT+TGG | - | chr4_1:68888916-68888935 | Msa0567610:five_prime_UTR | 35.0% |
| ATATATATTACTTTGGCGGG+TGG | - | chr4_1:68889087-68889106 | Msa0567610:intron | 35.0% | |
| ! | TATATATTACTTTGGCGGGT+GGG | - | chr4_1:68889088-68889107 | Msa0567610:intron | 35.0% |
| TATGTGACGAGTAGAGTATA+AGG | - | chr4_1:68889170-68889189 | Msa0567610:intron | 35.0% | |
| ACATTTCCAGTGTTCTTGTT+GGG | + | chr4_1:68889386-68889405 | None:intergenic | 35.0% | |
| TACATTTCCAGTGTTCTTGT+TGG | + | chr4_1:68889387-68889406 | None:intergenic | 35.0% | |
| !! | GTAGAAAGCAACTTGTTTTC+GGG | + | chr4_1:68889416-68889435 | None:intergenic | 35.0% |
| TTGTATTCATGCTTTATGCC+TGG | + | chr4_1:68889548-68889567 | None:intergenic | 35.0% | |
| TGAATACAATGTGCAACTTG+TGG | - | chr4_1:68889559-68889578 | Msa0567610:intron | 35.0% | |
| AATGCTACAGAATGTAGAGT+TGG | + | chr4_1:68889673-68889692 | None:intergenic | 35.0% | |
| TTGGAGAACTACATGACATT+TGG | - | chr4_1:68889854-68889873 | Msa0567610:five_prime_UTR | 35.0% | |
| GGAAAGTGGAAACATGAGAT+GGG | + | chr4_1:68885412-68885431 | Msa0567600:intron | 40.0% | |
| GAGAGAAGAGATGAAGACAA+CGG | + | chr4_1:68885433-68885452 | Msa0567600:intron | 40.0% | |
| TTTGTTGCCATTGGAGAAGT+AGG | - | chr4_1:68885735-68885754 | Msa0567610:three_prime_UTR | 40.0% | |
| CTACTAACCTACTTCTCCAA+TGG | + | chr4_1:68885745-68885764 | Msa0567600:CDS | 40.0% | |
| TTCTGGCACAAGAAGTCAAA+CGG | + | chr4_1:68885921-68885940 | None:intergenic | 40.0% | |
| TCTACTTCCAGTTTCAATGC+TGG | - | chr4_1:68886094-68886113 | Msa0567610:intron | 40.0% | |
| TGAAGTGGTTTACTTGCTTG+AGG | - | chr4_1:68886382-68886401 | Msa0567610:CDS | 40.0% | |
| CTGTTGTAATTGACCAAGCA+TGG | - | chr4_1:68886442-68886461 | Msa0567610:CDS | 40.0% | |
| !! | TGACACAAAAGAAGCATCCT+GGG | + | chr4_1:68886493-68886512 | None:intergenic | 40.0% |
| !! | ATGACACAAAAGAAGCATCC+TGG | + | chr4_1:68886494-68886513 | None:intergenic | 40.0% |
| TGACCATCATCATCTTGACA+CGG | + | chr4_1:68886575-68886594 | None:intergenic | 40.0% | |
| TGTTCCAAAGACCACTGATA+GGG | + | chr4_1:68886604-68886623 | None:intergenic | 40.0% | |
| TTCCCAGCTCTATGAATTCA+GGG | + | chr4_1:68886649-68886668 | None:intergenic | 40.0% | |
| ATTCCCAGCTCTATGAATTC+AGG | + | chr4_1:68886650-68886669 | None:intergenic | 40.0% | |
| AATGCATGTCTGCTCTCATA+TGG | - | chr4_1:68886675-68886694 | Msa0567610:CDS | 40.0% | |
| ATGTCTGCTCTCATATGGAA+AGG | - | chr4_1:68886680-68886699 | Msa0567610:CDS | 40.0% | |
| CTTAGAAGCTCAACTAAAGG+AGG | + | chr4_1:68886836-68886855 | None:intergenic | 40.0% | |
| CCTCTTAGAAGCTCAACTAA+AGG | + | chr4_1:68886839-68886858 | None:intergenic | 40.0% | |
| CCTTTAGTTGAGCTTCTAAG+AGG | - | chr4_1:68886836-68886855 | Msa0567610:CDS | 40.0% | |
| ! | TAGTTGAGCTTCTAAGAGGT+AGG | - | chr4_1:68886840-68886859 | Msa0567610:CDS | 40.0% |
| ! | TTCTAAGAGGTAGGTTGACT+TGG | - | chr4_1:68886849-68886868 | Msa0567610:CDS | 40.0% |
| ! | TCTAAGAGGTAGGTTGACTT+GGG | - | chr4_1:68886850-68886869 | Msa0567610:CDS | 40.0% |
| CCAAGGAACTCATTGCTAAT+TGG | + | chr4_1:68886976-68886995 | None:intergenic | 40.0% | |
| CCAATTAGCAATGAGTTCCT+TGG | - | chr4_1:68886973-68886992 | Msa0567610:CDS | 40.0% | |
| TGTTGAAATGGAGTCTAGGA+AGG | - | chr4_1:68887078-68887097 | Msa0567610:CDS | 40.0% | |
| TAACAAAACTACCTGGCATG+TGG | - | chr4_1:68887203-68887222 | Msa0567610:intron | 40.0% | |
| AACAAAACTACCTGGCATGT+GGG | - | chr4_1:68887204-68887223 | Msa0567610:intron | 40.0% | |
| GAAAATTCACCAGCTGGTAT+TGG | - | chr4_1:68887241-68887260 | Msa0567610:intron | 40.0% | |
| CTTAATAAGCCAATACCAGC+TGG | + | chr4_1:68887253-68887272 | None:intergenic | 40.0% | |
| TTTGTCATCAGAAGCTTGGT+AGG | - | chr4_1:68887278-68887297 | Msa0567610:intron | 40.0% | |
| TTGTCATCAGAAGCTTGGTA+GGG | - | chr4_1:68887279-68887298 | Msa0567610:intron | 40.0% | |
| TGTAACCTTGCATTTGTTCC+TGG | - | chr4_1:68887439-68887458 | Msa0567610:intron | 40.0% | |
| CAGAAATATGTCACACCAAG+CGG | + | chr4_1:68887762-68887781 | None:intergenic | 40.0% | |
| TCATGATTCAGCTCATGTGT+AGG | - | chr4_1:68887922-68887941 | Msa0567610:CDS | 40.0% | |
| ACTGTTGAGTTCTCTTCACT+AGG | - | chr4_1:68888077-68888096 | Msa0567610:CDS | 40.0% | |
| CTGTTGAGTTCTCTTCACTA+GGG | - | chr4_1:68888078-68888097 | Msa0567610:CDS | 40.0% | |
| CGCCTTGGCATATATTATGT+AGG | - | chr4_1:68888126-68888145 | Msa0567610:CDS | 40.0% | |
| AAGATTGCATCGAGACACAA+GGG | - | chr4_1:68888245-68888264 | Msa0567610:CDS | 40.0% | |
| TCGCACTAAAGAACAGATAG+AGG | - | chr4_1:68888291-68888310 | Msa0567610:CDS | 40.0% | |
| ATGGGAAAAGAATATGCCCA+AGG | - | chr4_1:68888342-68888361 | Msa0567610:CDS | 40.0% | |
| ! | GGAAATTCCCTTTTCTCATC+TGG | - | chr4_1:68888412-68888431 | Msa0567610:CDS | 40.0% |
| ! | TCTTTTGCTGCAACAACCTT+TGG | - | chr4_1:68888540-68888559 | Msa0567610:CDS | 40.0% |
| CACAAGCTTATGACATGCTA+GGG | - | chr4_1:68888641-68888660 | Msa0567610:CDS | 40.0% | |
| GAGATCAGGATCATTTGACT+GGG | + | chr4_1:68888716-68888735 | None:intergenic | 40.0% | |
| AGAGATCAGGATCATTTGAC+TGG | + | chr4_1:68888717-68888736 | None:intergenic | 40.0% | |
| AACTAATCGCTCAGCGTAAT+CGG | + | chr4_1:68888761-68888780 | None:intergenic | 40.0% | |
| GACAGCTAGTGAAAGTGATA+TGG | - | chr4_1:68888900-68888919 | Msa0567610:five_prime_UTR | 40.0% | |
| ATTGGAATAACGACGATGAC+AGG | - | chr4_1:68888956-68888975 | Msa0567610:intron | 40.0% | |
| !! | ACTGATAAAAGCATTACCGC+AGG | + | chr4_1:68889030-68889049 | None:intergenic | 40.0% |
| ! | ATATATTACTTTGGCGGGTG+GGG | - | chr4_1:68889089-68889108 | Msa0567610:intron | 40.0% |
| TCGATCAACATGACTCTTAC+AGG | - | chr4_1:68889230-68889249 | Msa0567610:intron | 40.0% | |
| ! | CAACTTGAAGTGTTTGTGTG+TGG | - | chr4_1:68889336-68889355 | Msa0567610:intron | 40.0% |
| AGTGTTTGTGTGTGGTCAAA+TGG | - | chr4_1:68889344-68889363 | Msa0567610:intron | 40.0% | |
| TATTGTCCCAACAAGAACAC+TGG | - | chr4_1:68889377-68889396 | Msa0567610:intron | 40.0% | |
| ATTCATGCTTTATGCCTGGA+GGG | + | chr4_1:68889544-68889563 | None:intergenic | 40.0% | |
| TATTCATGCTTTATGCCTGG+AGG | + | chr4_1:68889545-68889564 | None:intergenic | 40.0% | |
| ! | AGAAGAACCTTGACTTGACA+TGG | - | chr4_1:68889583-68889602 | Msa0567610:intron | 40.0% |
| AGGATTACCATGTCAAGTCA+AGG | + | chr4_1:68889593-68889612 | None:intergenic | 40.0% | |
| TTGACATGGTAATCCTTCCT+TGG | - | chr4_1:68889597-68889616 | Msa0567610:intron | 40.0% | |
| TATGGGGAGAACGACAAAAA+TGG | + | chr4_1:68889804-68889823 | None:intergenic | 40.0% | |
| GAGAACTACATGACATTTGG+AGG | - | chr4_1:68889857-68889876 | Msa0567610:five_prime_UTR | 40.0% | |
| CGGAAAGTGGAAACATGAGA+TGG | + | chr4_1:68885413-68885432 | Msa0567600:intron | 45.0% | |
| GAGATGAAGACAACGGAAAG+TGG | + | chr4_1:68885426-68885445 | Msa0567600:intron | 45.0% | |
| CACTGAAGCGAAATAGTTGG+CGG | + | chr4_1:68885591-68885610 | Msa0567600:intron | 45.0% | |
| AATCTCTCTCACTCTCTCAC+AGG | - | chr4_1:68885652-68885671 | Msa0567610:three_prime_UTR | 45.0% | |
| !!! | CTTACACTCACTGTTTTGGC+TGG | - | chr4_1:68885992-68886011 | Msa0567610:intron | 45.0% |
| !! | CAAAAGAAGCATCCTGGGTA+TGG | + | chr4_1:68886488-68886507 | None:intergenic | 45.0% |
| CTTCCGTGTCAAGATGATGA+TGG | - | chr4_1:68886569-68886588 | Msa0567610:CDS | 45.0% | |
| !! | GTGTCAAGATGATGATGGTC+AGG | - | chr4_1:68886574-68886593 | Msa0567610:CDS | 45.0% |
| TTCTCCCTATCAGTGGTCTT+TGG | - | chr4_1:68886597-68886616 | Msa0567610:CDS | 45.0% | |
| GTGTTCCAAAGACCACTGAT+AGG | + | chr4_1:68886605-68886624 | None:intergenic | 45.0% | |
| !! | TGGTCTTTGGAACACAGCAA+TGG | - | chr4_1:68886610-68886629 | Msa0567610:CDS | 45.0% |
| TGACCCTGAATTCATAGAGC+TGG | - | chr4_1:68886643-68886662 | Msa0567610:CDS | 45.0% | |
| GACCCTGAATTCATAGAGCT+GGG | - | chr4_1:68886644-68886663 | Msa0567610:CDS | 45.0% | |
| AGGGTAGCAGTTAGAGCTTT+GGG | - | chr4_1:68886881-68886900 | Msa0567610:CDS | 45.0% | |
| TTTCCCACTTTAGCCAGTCA+CGG | - | chr4_1:68886929-68886948 | Msa0567610:CDS | 45.0% | |
| CACTGTGATCTTCTTACACG+CGG | - | chr4_1:68887046-68887065 | Msa0567610:CDS | 45.0% | |
| GAAGAGACCAACATTGCAGT+TGG | + | chr4_1:68887120-68887139 | None:intergenic | 45.0% | |
| ACAAAACTACCTGGCATGTG+GGG | - | chr4_1:68887205-68887224 | Msa0567610:intron | 45.0% | |
| TGTCATCAGAAGCTTGGTAG+GGG | - | chr4_1:68887280-68887299 | Msa0567610:intron | 45.0% | |
| TTGCTCGCTCTTCAGATGAT+TGG | - | chr4_1:68887347-68887366 | Msa0567610:intron | 45.0% | |
| CAGAACCAGGAACAAATGCA+AGG | + | chr4_1:68887447-68887466 | None:intergenic | 45.0% | |
| ! | GGAACTCTACTGACTGTCTT+AGG | - | chr4_1:68887518-68887537 | Msa0567610:intron | 45.0% |
| CTGTCTTAGGCATGAATGCT+TGG | - | chr4_1:68887531-68887550 | Msa0567610:intron | 45.0% | |
| TGCTTGGCTTAGCATGTGAA+TGG | - | chr4_1:68887547-68887566 | Msa0567610:intron | 45.0% | |
| CGGCAATTGCTAACCATGTT+TGG | - | chr4_1:68887968-68887987 | Msa0567610:CDS | 45.0% | |
| CTAGAGTTGTAATCTCCGCA+AGG | + | chr4_1:68888183-68888202 | None:intergenic | 45.0% | |
| CTTGCGGAGATTACAACTCT+AGG | - | chr4_1:68888181-68888200 | Msa0567610:CDS | 45.0% | |
| CAAGATTGCATCGAGACACA+AGG | - | chr4_1:68888244-68888263 | Msa0567610:CDS | 45.0% | |
| GTGTCCTATGAGATCCAAGA+AGG | - | chr4_1:68888480-68888499 | Msa0567610:CDS | 45.0% | |
| CTCTCCTTCTTGGATCTCAT+AGG | + | chr4_1:68888487-68888506 | None:intergenic | 45.0% | |
| GAGAACAACTCTCTCCTTCT+TGG | + | chr4_1:68888497-68888516 | None:intergenic | 45.0% | |
| ! | CTTTTGGCATGACGATTGAC+AGG | + | chr4_1:68888607-68888626 | None:intergenic | 45.0% |
| ATCGTCATGCCAAAAGTCTC+TGG | - | chr4_1:68888611-68888630 | Msa0567610:CDS | 45.0% | |
| GCACAAGCTTATGACATGCT+AGG | - | chr4_1:68888640-68888659 | Msa0567610:CDS | 45.0% | |
| ATGATCCTGATCTCTCACTG+AGG | - | chr4_1:68888722-68888741 | Msa0567610:CDS | 45.0% | |
| ! | TTTTGCCTCAGTGAGAGATC+AGG | + | chr4_1:68888730-68888749 | None:intergenic | 45.0% |
| ACTAATCGCTCAGCGTAATC+GGG | + | chr4_1:68888760-68888779 | None:intergenic | 45.0% | |
| ! | TGCTGCTTGGTTATTTCGAG+AGG | - | chr4_1:68888795-68888814 | Msa0567610:CDS | 45.0% |
| ! | GGTGACGGTGGTGATATATA+TGG | - | chr4_1:68888850-68888869 | Msa0567610:CDS | 45.0% |
| ! | AGAGACTGATGACTCGGAAT+GGG | - | chr4_1:68888876-68888895 | Msa0567610:exon | 45.0% |
| CGACGATGACAGGAAAGAAT+AGG | - | chr4_1:68888966-68888985 | Msa0567610:intron | 45.0% | |
| TGTGTGTGGTCAAATGGTTG+TGG | - | chr4_1:68889350-68889369 | Msa0567610:intron | 45.0% | |
| ! | TGACACTTTGATTTCCCTCC+AGG | - | chr4_1:68889527-68889546 | Msa0567610:intron | 45.0% |
| GAGAACATTTGCACCAAGGA+AGG | + | chr4_1:68889613-68889632 | None:intergenic | 45.0% | |
| TGTAGAGTTGGAACAGTCAC+AGG | + | chr4_1:68889661-68889680 | None:intergenic | 45.0% | |
| GACAGGACACTTCACTGTTC+CGG | + | chr4_1:68885375-68885394 | Msa0567600:intron | 50.0% | |
| ! | GGAACAGTGAAGTGTCCTGT+CGG | - | chr4_1:68885374-68885393 | Msa0567610:three_prime_UTR | 50.0% |
| ! | GAACAGTGAAGTGTCCTGTC+GGG | - | chr4_1:68885375-68885394 | Msa0567610:three_prime_UTR | 50.0% |
| AAATAGTTGGCGGAGATCGG+GGG | + | chr4_1:68885581-68885600 | Msa0567600:intron | 50.0% | |
| GAAATAGTTGGCGGAGATCG+GGG | + | chr4_1:68885582-68885601 | Msa0567600:intron | 50.0% | |
| CGAAATAGTTGGCGGAGATC+GGG | + | chr4_1:68885583-68885602 | Msa0567600:intron | 50.0% | |
| GCGAAATAGTTGGCGGAGAT+CGG | + | chr4_1:68885584-68885603 | Msa0567600:intron | 50.0% | |
| TCCAGTTTCAATGCTGGTGC+AGG | - | chr4_1:68886100-68886119 | Msa0567610:intron | 50.0% | |
| ! | TCCTGCACCAGCATTGAAAC+TGG | + | chr4_1:68886104-68886123 | None:intergenic | 50.0% |
| ACACTTGCTCTGCGTTTGCT+TGG | + | chr4_1:68886530-68886549 | None:intergenic | 50.0% | |
| AAGGACTGAAGAATCGACGC+TGG | - | chr4_1:68886699-68886718 | Msa0567610:CDS | 50.0% | |
| GCAGAAAGTTCTGTGCATGC+TGG | - | chr4_1:68886803-68886822 | Msa0567610:CDS | 50.0% | |
| !! | GTTGACTTGGGTTGAGCAGA+GGG | - | chr4_1:68886862-68886881 | Msa0567610:CDS | 50.0% |
| GAGGGTAGCAGTTAGAGCTT+TGG | - | chr4_1:68886880-68886899 | Msa0567610:CDS | 50.0% | |
| ! | GGCTAAAGTGGGAAAAGTGC+TGG | + | chr4_1:68886924-68886943 | None:intergenic | 50.0% |
| ! | TCACCGTGACTGGCTAAAGT+GGG | + | chr4_1:68886935-68886954 | None:intergenic | 50.0% |
| ! | TTCACCGTGACTGGCTAAAG+TGG | + | chr4_1:68886936-68886955 | None:intergenic | 50.0% |
| CTCGAGAATTTCACCGTGAC+TGG | + | chr4_1:68886945-68886964 | None:intergenic | 50.0% | |
| TGATCTTCTTACACGCGGCA+TGG | - | chr4_1:68887051-68887070 | Msa0567610:CDS | 50.0% | |
| GATCTTCTTACACGCGGCAT+GGG | - | chr4_1:68887052-68887071 | Msa0567610:CDS | 50.0% | |
| ! | GCGGTGTTGAAATGGAGTCT+AGG | - | chr4_1:68887074-68887093 | Msa0567610:CDS | 50.0% |
| ATTCCAGGGCAACTAGCAAC+AGG | + | chr4_1:68887307-68887326 | None:intergenic | 50.0% | |
| CCAGTTGAAGTAGCAGAACC+AGG | + | chr4_1:68887460-68887479 | None:intergenic | 50.0% | |
| !! | CCTGGTTCTGCTACTTCAAC+TGG | - | chr4_1:68887457-68887476 | Msa0567610:intron | 50.0% |
| CAGTCTACAGAAATCGGTGC+TGG | + | chr4_1:68888061-68888080 | None:intergenic | 50.0% | |
| GCCTGCATTAGTTGACCTTG+CGG | - | chr4_1:68888165-68888184 | Msa0567610:CDS | 50.0% | |
| TCCGCAAGGTCAACTAATGC+AGG | + | chr4_1:68888169-68888188 | None:intergenic | 50.0% | |
| TTGCATCGAGACACAAGGGT+CGG | - | chr4_1:68888249-68888268 | Msa0567610:CDS | 50.0% | |
| TATTAAGCAGGCTGCAGCAC+TGG | - | chr4_1:68888375-68888394 | Msa0567610:CDS | 50.0% | |
| !! | GCACTGGTTGTCAAGCTTGA+AGG | - | chr4_1:68888391-68888410 | Msa0567610:CDS | 50.0% |
| GCATCACTTATGGCAGCCAA+AGG | + | chr4_1:68888559-68888578 | None:intergenic | 50.0% | |
| TGCACGGGTAGCATCACTTA+TGG | + | chr4_1:68888569-68888588 | None:intergenic | 50.0% | |
| TCTGTGGAGACATAGTGCAC+GGG | + | chr4_1:68888584-68888603 | None:intergenic | 50.0% | |
| GTCTGTGGAGACATAGTGCA+CGG | + | chr4_1:68888585-68888604 | None:intergenic | 50.0% | |
| CATGACGATTGACAGGTCTG+TGG | + | chr4_1:68888600-68888619 | None:intergenic | 50.0% | |
| GTCATGCCAAAAGTCTCTGG+AGG | - | chr4_1:68888614-68888633 | Msa0567610:CDS | 50.0% | |
| ! | CATGGTGGCGTCCATAATCA+GGG | - | chr4_1:68888829-68888848 | Msa0567610:CDS | 50.0% |
| TGGTCCAGAGACTGATGACT+CGG | - | chr4_1:68888870-68888889 | Msa0567610:exon | 50.0% | |
| CATTCCGAGTCATCAGTCTC+TGG | + | chr4_1:68888877-68888896 | None:intergenic | 50.0% | |
| ! | CAGAGACTGATGACTCGGAA+TGG | - | chr4_1:68888875-68888894 | Msa0567610:exon | 50.0% |
| ! | GGAATTGGCGATGATGACGA+CGG | - | chr4_1:68888931-68888950 | Msa0567610:five_prime_UTR | 50.0% |
| !! | GGGATTGGCTAGCATACCAA+TGG | - | chr4_1:68889109-68889128 | Msa0567610:intron | 50.0% |
| GCAGGAGAACATTTGCACCA+AGG | + | chr4_1:68889617-68889636 | None:intergenic | 50.0% | |
| CAACTCTGCTTCGTTCATGC+AGG | + | chr4_1:68889635-68889654 | None:intergenic | 50.0% | |
| CTGCATGAACGAAGCAGAGT+TGG | - | chr4_1:68889633-68889652 | Msa0567610:intron | 50.0% | |
| GGGTGTGTTTACTACCCGAC+AGG | + | chr4_1:68885392-68885411 | Msa0567600:intron | 55.0% | |
| TCATCGGACTGTCCATACCC+AGG | - | chr4_1:68886473-68886492 | Msa0567610:CDS | 55.0% | |
| GGTCAGGTTCTCCCTATCAG+TGG | - | chr4_1:68886590-68886609 | Msa0567610:CDS | 55.0% | |
| !! | GGTTGACTTGGGTTGAGCAG+AGG | - | chr4_1:68886861-68886880 | Msa0567610:CDS | 55.0% |
| AATGGAGTCTAGGAAGGCCG+AGG | - | chr4_1:68887084-68887103 | Msa0567610:CDS | 55.0% | |
| AGTCTAGGAAGGCCGAGGAA+TGG | - | chr4_1:68887089-68887108 | Msa0567610:CDS | 55.0% | |
| GTCTAGGAAGGCCGAGGAAT+GGG | - | chr4_1:68887090-68887109 | Msa0567610:CDS | 55.0% | |
| ! | CAGTTGGCTAGCCCATTCCT+CGG | + | chr4_1:68887104-68887123 | None:intergenic | 55.0% |
| !! | GGGCTAGCCAACTGCAATGT+TGG | - | chr4_1:68887110-68887129 | Msa0567610:CDS | 55.0% |
| AAACTACCTGGCATGTGGGG+TGG | - | chr4_1:68887208-68887227 | Msa0567610:intron | 55.0% | |
| TGCATCGAGACACAAGGGTC+GGG | - | chr4_1:68888250-68888269 | Msa0567610:CDS | 55.0% | |
| ! | TGCTCGCCTCCAGAGACTTT+TGG | + | chr4_1:68888623-68888642 | None:intergenic | 55.0% |
| ! | AGAAGCAGATGCGTGCTGCT+TGG | - | chr4_1:68888782-68888801 | Msa0567610:CDS | 55.0% |
| CGAGAGGCAGCTGTTAAGCA+TGG | - | chr4_1:68888811-68888830 | Msa0567610:CDS | 55.0% | |
| GAGGCAGCTGTTAAGCATGG+TGG | - | chr4_1:68888814-68888833 | Msa0567610:CDS | 55.0% | |
| ! | GCATGGTGGCGTCCATAATC+AGG | - | chr4_1:68888828-68888847 | Msa0567610:CDS | 55.0% |
| GGCGTCCATAATCAGGGTGA+CGG | - | chr4_1:68888835-68888854 | Msa0567610:CDS | 55.0% | |
| ! | GTCCATAATCAGGGTGACGG+TGG | - | chr4_1:68888838-68888857 | Msa0567610:CDS | 55.0% |
| CACCACCGTCACCCTGATTA+TGG | + | chr4_1:68888843-68888862 | None:intergenic | 55.0% | |
| ! | GCGATGATGACGACGGTGAT+TGG | - | chr4_1:68888938-68888957 | Msa0567610:five_prime_UTR | 55.0% |
| ! | TTACTTTGGCGGGTGGGGAT+TGG | - | chr4_1:68889094-68889113 | Msa0567610:intron | 55.0% |
| CTTCTTACACGCGGCATGGG+CGG | - | chr4_1:68887055-68887074 | Msa0567610:CDS | 60.0% | |
| ! | CGGCATGGGCGGTGTTGAAA+TGG | - | chr4_1:68887066-68887085 | Msa0567610:CDS | 60.0% |
| ACAAGACCACCCCACATGCC+AGG | + | chr4_1:68887217-68887236 | None:intergenic | 60.0% | |
| GGACCTGTTGCTAGTTGCCC+TGG | - | chr4_1:68887301-68887320 | Msa0567610:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 68885366 | 68889981 | 68885366 | ID=Msa0567610;Name=Msa0567610 |
| chr4_1 | mRNA | 68885366 | 68889981 | 68885366 | ID=Msa0567610-mRNA-1;Parent=Msa0567610;Name=Msa0567610-mRNA-1;_AED=0.00;_eAED=0.00;_QI=390|1|1|1|0.33|0|4|452|602 |
| chr4_1 | exon | 68885366 | 68885798 | 68885366 | ID=Msa0567610-mRNA-1:exon:22920;Parent=Msa0567610-mRNA-1 |
| chr4_1 | exon | 68886341 | 68887199 | 68886341 | ID=Msa0567610-mRNA-1:exon:22919;Parent=Msa0567610-mRNA-1 |
| chr4_1 | exon | 68887918 | 68888968 | 68887918 | ID=Msa0567610-mRNA-1:exon:22918;Parent=Msa0567610-mRNA-1 |
| chr4_1 | exon | 68889674 | 68889981 | 68889674 | ID=Msa0567610-mRNA-1:exon:22917;Parent=Msa0567610-mRNA-1 |
| chr4_1 | five_prime_UTR | 68889674 | 68889981 | 68889674 | ID=Msa0567610-mRNA-1:five_prime_utr;Parent=Msa0567610-mRNA-1 |
| chr4_1 | five_prime_UTR | 68888887 | 68888968 | 68888887 | ID=Msa0567610-mRNA-1:five_prime_utr;Parent=Msa0567610-mRNA-1 |
| chr4_1 | CDS | 68887918 | 68888886 | 68887918 | ID=Msa0567610-mRNA-1:cds;Parent=Msa0567610-mRNA-1 |
| chr4_1 | CDS | 68886360 | 68887199 | 68886360 | ID=Msa0567610-mRNA-1:cds;Parent=Msa0567610-mRNA-1 |
| chr4_1 | three_prime_UTR | 68886341 | 68886359 | 68886341 | ID=Msa0567610-mRNA-1:three_prime_utr;Parent=Msa0567610-mRNA-1 |
| chr4_1 | three_prime_UTR | 68885366 | 68885798 | 68885366 | ID=Msa0567610-mRNA-1:three_prime_utr;Parent=Msa0567610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
