AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0758650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0758650 MtrunA17_Chr5g0406741 97.658 427 9 1 1 426 1 427 0.0 868
Msa0758650 MtrunA17_Chr8g0370671 71.694 431 110 4 4 426 5 431 0.0 622
Msa0758650 MtrunA17_Chr7g0255771 46.763 278 137 3 154 423 182 456 3.70e-84 265
Msa0758650 MtrunA17_Chr5g0441371 46.494 271 142 3 154 422 148 417 1.22e-78 249
Msa0758650 MtrunA17_Chr8g0357001 47.679 237 118 2 143 379 464 694 4.73e-64 218
Msa0758650 MtrunA17_Chr1g0148681 40.074 272 155 4 154 418 140 410 6.93e-60 201
Msa0758650 MtrunA17_Chr3g0138431 40.959 271 152 4 155 418 198 467 5.50e-57 194
Msa0758650 MtrunA17_Chr3g0125051 37.847 288 161 8 144 419 216 497 2.84e-56 193
Msa0758650 MtrunA17_Chr2g0332171 41.975 243 132 5 145 379 195 436 7.37e-53 184
Msa0758650 MtrunA17_Chr3g0125041 36.429 280 167 6 155 424 228 506 1.77e-51 181
Msa0758650 MtrunA17_Chr2g0332181 37.413 286 167 5 136 410 129 413 1.62e-50 176
Msa0758650 MtrunA17_Chr1g0152871 36.398 261 156 4 164 414 84 344 6.12e-48 167
Msa0758650 MtrunA17_Chr3g0134401 34.263 251 158 3 171 414 74 324 1.50e-43 155
Msa0758650 MtrunA17_Chr3g0102851 39.648 227 126 5 169 388 30 252 4.90e-42 150
Msa0758650 MtrunA17_Chr3g0134411 33.984 256 160 4 168 414 88 343 3.35e-41 150
Msa0758650 MtrunA17_Chr3g0134421 34.387 253 157 4 171 414 84 336 1.77e-39 145
Msa0758650 MtrunA17_Chr3g0134441 35.246 244 139 5 169 398 62 300 2.19e-39 144
Msa0758650 MtrunA17_Chr3g0103471 36.726 226 132 5 169 387 20 241 6.90e-37 136
Msa0758650 MtrunA17_Chr3g0102861 36.283 226 133 5 169 387 20 241 1.01e-35 132
Msa0758650 MtrunA17_Chr3g0102621 35.193 233 140 5 162 387 19 247 7.02e-35 130
Msa0758650 MtrunA17_Chr3g0134431 32.203 236 138 5 175 405 13 231 1.03e-28 113
Msa0758650 MtrunA17_Chr6g0462981 34.363 259 146 9 170 421 45 286 3.06e-28 113
Msa0758650 MtrunA17_Chr3g0102631 38.286 175 101 3 221 388 1 175 5.49e-28 110
Msa0758650 MtrunA17_Chr3g0102651 38.286 175 101 3 221 388 1 175 5.49e-28 110
Msa0758650 MtrunA17_Chr3g0102661 38.286 175 101 3 221 388 1 175 5.49e-28 110
Msa0758650 MtrunA17_Chr3g0102671 38.286 175 101 3 221 388 1 175 5.49e-28 110
Msa0758650 MtrunA17_Chr6g0462911 31.325 249 156 6 170 414 45 282 6.10e-27 110
Msa0758650 MtrunA17_Chr5g0398791 34.302 172 108 2 170 337 2 172 2.63e-24 99.0
Msa0758650 MtrunA17_Chr5g0418901 46.914 81 43 0 225 305 7 87 4.31e-20 84.7
Msa0758650 MtrunA17_Chr1g0161581 32.979 188 111 3 173 354 336 514 2.25e-16 81.3
Msa0758650 MtrunA17_Chr2g0277271 49.123 57 29 0 208 264 33 89 3.47e-12 62.4
Msa0758650 MtrunA17_Chr3g0134781 28.571 119 82 1 198 313 61 179 8.71e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0758650 AT1G20610.1 59.453 402 155 5 25 423 33 429 1.21e-169 483
Msa0758650 AT1G76310.1 58.314 439 158 11 1 423 1 430 5.38e-169 481
Msa0758650 AT1G76310.3 54.818 467 158 12 1 423 1 458 2.28e-162 465
Msa0758650 AT2G17620.1 59.662 414 141 8 21 423 25 423 2.12e-159 456
Msa0758650 AT4G35620.1 59.048 420 138 10 21 425 27 427 9.40e-150 432
Msa0758650 AT1G76310.2 57.937 378 137 9 16 380 19 387 9.63e-144 415
Msa0758650 AT4G35620.2 59.091 374 120 9 21 380 27 381 1.99e-130 381
Msa0758650 AT1G76310.4 56.740 319 116 9 16 321 19 328 1.06e-111 332
Msa0758650 AT3G11520.1 39.241 395 213 8 50 425 26 412 5.31e-87 271
Msa0758650 AT1G20590.1 69.364 173 53 0 229 401 63 235 6.62e-86 263
Msa0758650 AT5G06150.1 37.116 423 222 9 26 423 30 433 3.09e-85 268
Msa0758650 AT2G26760.1 46.183 262 138 3 150 409 109 369 2.09e-78 248
Msa0758650 AT1G16330.1 44.444 279 153 1 140 418 366 642 5.03e-78 254
Msa0758650 AT3G11520.2 39.714 350 184 8 50 380 26 367 4.89e-76 242
Msa0758650 AT4G37490.1 44.718 284 150 4 146 423 140 422 6.35e-76 243
Msa0758650 AT1G77390.1 39.405 269 155 4 154 415 162 429 2.30e-59 200
Msa0758650 AT5G25380.3 33.690 374 230 8 50 414 59 423 7.89e-58 196
Msa0758650 AT5G25380.1 33.690 374 230 8 50 414 59 423 7.89e-58 196
Msa0758650 AT5G25380.4 34.656 378 227 9 50 414 59 429 3.71e-57 194
Msa0758650 AT5G25380.2 33.604 369 227 8 50 409 59 418 9.94e-57 192
Msa0758650 AT5G11300.1 42.379 269 147 4 154 415 156 423 1.97e-56 192
Msa0758650 AT5G43080.2 37.548 261 160 3 156 414 73 332 3.41e-55 187
Msa0758650 AT5G06150.2 37.195 328 160 10 26 328 30 336 5.27e-55 186
Msa0758650 AT1G44110.1 37.050 278 167 4 145 415 169 445 1.57e-54 188
Msa0758650 AT1G47210.2 39.552 268 152 5 156 414 88 354 1.00e-53 183
Msa0758650 AT5G43080.1 36.842 266 160 4 156 414 73 337 5.16e-53 181
Msa0758650 AT1G15570.1 39.700 267 153 4 155 414 173 438 5.69e-53 183
Msa0758650 AT1G80370.1 39.700 267 153 4 155 414 182 447 6.97e-53 184
Msa0758650 AT5G11300.2 45.946 222 112 4 154 368 156 376 6.41e-52 180
Msa0758650 AT1G47220.1 39.925 268 151 5 156 414 42 308 6.52e-52 177
Msa0758650 AT1G47230.1 36.154 260 157 4 164 414 88 347 7.16e-48 168
Msa0758650 AT1G47230.2 36.015 261 157 5 164 414 88 348 3.56e-46 163
Msa0758650 AT1G34460.2 31.987 297 155 6 26 318 142 395 2.07e-37 142
Msa0758650 AT1G34460.4 31.987 297 155 6 26 318 142 395 2.07e-37 142
Msa0758650 AT1G34460.9 32.209 326 163 11 8 318 102 384 2.46e-37 142
Msa0758650 AT1G34460.6 33.000 300 151 9 26 318 142 398 4.04e-37 141
Msa0758650 AT1G34460.3 33.000 300 151 9 26 318 142 398 4.04e-37 141
Msa0758650 AT1G34460.8 33.000 300 151 9 26 318 142 398 4.04e-37 141
Msa0758650 AT1G34460.1 33.000 300 151 9 26 318 142 398 4.04e-37 141
Msa0758650 AT1G34460.5 33.000 300 151 9 26 318 142 398 5.58e-37 141
Msa0758650 AT1G34460.7 33.000 300 151 9 26 318 142 398 6.10e-37 141
Msa0758650 AT1G14750.1 33.696 184 119 2 202 382 385 568 8.04e-21 95.5
Msa0758650 AT1G14750.3 33.696 184 119 2 202 382 385 568 8.55e-21 95.5
Msa0758650 AT1G47210.1 44.762 105 54 3 156 257 88 191 1.12e-20 89.7
Msa0758650 AT1G14750.2 33.696 184 119 2 202 382 217 400 1.63e-20 93.6
Msa0758650 AT1G14750.4 33.696 184 118 3 202 382 217 399 2.11e-19 90.1

Find 103 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATGCCCTTCTTCTTCT+AGG 0.109853 5_2:+13988449 Msa0758650:five_prime_UTR
AAACAATTAACTTTCATAAA+TGG 0.119270 5_2:+13992056 Msa0758650:three_prime_UTR
CAGAGAATGCTCTAGTTTAA+TGG 0.170801 5_2:+13991874 Msa0758650:intron
CCATTTCCAGAACTTCTTTC+CGG 0.210345 5_2:-13990807 None:intergenic
TTTCATGAGAAGGTTCTTAA+AGG 0.288446 5_2:+13991089 Msa0758650:CDS
GGGTGTGATTAATCAGAATT+TGG 0.301953 5_2:+13988729 Msa0758650:CDS
AAATCAAGTTCAAATGGATT+TGG 0.306924 5_2:+13989544 Msa0758650:CDS
AACAATTAACTTTCATAAAT+GGG 0.326556 5_2:+13992057 Msa0758650:three_prime_UTR
TGGTCTAGTGGCAATGCTTT+TGG 0.334805 5_2:+13990714 Msa0758650:CDS
GCTGGGACAGGGAAACTTAC+AGG 0.335251 5_2:+13991914 Msa0758650:CDS
GTTCCCATTGAACATAATAA+TGG 0.345729 5_2:+13992241 Msa0758650:three_prime_UTR
CTGTGTTTCACCAAACTATA+TGG 0.349277 5_2:+13990335 Msa0758650:CDS
CATTTCCAGAACTTCTTTCC+GGG 0.354928 5_2:-13990806 None:intergenic
ATTTCCATTATTATGTTCAA+TGG 0.354955 5_2:-13992245 None:intergenic
TGAAAGGATGAGAGCTATAC+TGG 0.375881 5_2:+13990377 Msa0758650:CDS
TTCTCCAGAAGAAAACTTGC+TGG 0.376232 5_2:-13991989 None:intergenic
TATCAAACCTTCAAAATTTG+TGG 0.395715 5_2:-13988557 None:intergenic
ATGGGAATTTACTAATACTA+AGG 0.400084 5_2:+13992117 Msa0758650:three_prime_UTR
AGTTGAGATGGAGGATATCA+TGG 0.409043 5_2:+13989776 Msa0758650:CDS
TGCTCTAAAGCCATTGGCAC+TGG 0.419967 5_2:-13989613 None:intergenic
GCAAGAGGGTCATTTGCATC+AGG 0.421294 5_2:-13989825 None:intergenic
TTAGCAAAATCAAGTTCAAA+TGG 0.429857 5_2:+13989538 Msa0758650:CDS
TAAGCAACTTGGGTTGCAAT+GGG 0.430023 5_2:+13992093 Msa0758650:three_prime_UTR
GGGGTGTCAATGTCCATAAC+AGG 0.441867 5_2:-13989804 None:intergenic
TCTGTTTGCTCTAAAGCCAT+TGG 0.446717 5_2:-13989619 None:intergenic
TTTCCATTATTATGTTCAAT+GGG 0.449092 5_2:-13992244 None:intergenic
CTAGTGATGGGTCGATGAAC+CGG 0.449551 5_2:-13988941 None:intergenic
TGAGAAGAAACAAGCGGATC+CGG 0.456269 5_2:+13988922 Msa0758650:CDS
CTTATAGGAGGAAGTTGAGA+TGG 0.464867 5_2:+13989764 Msa0758650:intron
AATTGCTGTGCCATATAGTT+TGG 0.468094 5_2:-13990345 None:intergenic
TATCATGGAAGAGCCTGTTA+TGG 0.468278 5_2:+13989791 Msa0758650:CDS
GGGTTAGATTCTAGAAAGGT+TGG 0.473549 5_2:+13988688 Msa0758650:CDS
ATCAAACCTTCAAAATTTGT+GGG 0.477220 5_2:-13988556 None:intergenic
GGCACTGGCTGATCCTCCAC+TGG 0.480548 5_2:-13989598 None:intergenic
GAGTTGATCTTCAGAGTAGT+TGG 0.480770 5_2:-13991402 None:intergenic
GTTGACTTTCACAAGAAGGC+TGG 0.486106 5_2:+13991896 Msa0758650:CDS
TTTCACAAGAAGGCTGGGAC+AGG 0.486235 5_2:+13991902 Msa0758650:CDS
AACTTGGGTTGCAATGGGGA+TGG 0.488491 5_2:+13992098 Msa0758650:three_prime_UTR
ACAGCTCAATGCACTATGTA+TGG 0.490108 5_2:+13991344 Msa0758650:CDS
AAGAATGTTGTAAGCAACTT+GGG 0.494197 5_2:+13992083 Msa0758650:three_prime_UTR
CCGGAAAGAAGTTCTGGAAA+TGG 0.494858 5_2:+13990807 Msa0758650:CDS
GGGCAAAACAGAAGAGCATT+GGG 0.497902 5_2:+13988709 Msa0758650:CDS
AGGAGGGTTAGATTCTAGAA+AGG 0.500876 5_2:+13988684 Msa0758650:intron
GGTTAGATTCTAGAAAGGTT+GGG 0.502394 5_2:+13988689 Msa0758650:CDS
TAAGAATGTTGTAAGCAACT+TGG 0.502923 5_2:+13992082 Msa0758650:three_prime_UTR
ATACACCCGGAAAGAAGTTC+TGG 0.504153 5_2:+13990801 Msa0758650:CDS
ACTTGGGTTGCAATGGGGAT+GGG 0.504185 5_2:+13992099 Msa0758650:three_prime_UTR
CGATCTGATTCGCTATGCAT+TGG 0.506937 5_2:-13989643 None:intergenic
TCTGGAGAATGAGTTGTAGC+TGG 0.507872 5_2:+13992003 Msa0758650:exon
ACTGGTTGACTGGCTTATTG+AGG 0.508362 5_2:+13990395 Msa0758650:CDS
TGGGCAAAACAGAAGAGCAT+TGG 0.511695 5_2:+13988708 Msa0758650:CDS
GCTTCAGTTGGTTGGTCTAG+TGG 0.512653 5_2:+13990702 Msa0758650:CDS
TGGAAGATCCTAGAAGAAGA+AGG 0.516609 5_2:-13988457 None:intergenic
AATCAGAATTTGGTTGTGGA+AGG 0.518311 5_2:+13988739 Msa0758650:CDS
ATCAATTCCTCACCTAGTGA+TGG 0.523848 5_2:-13988954 None:intergenic
AATGGTTGACTTTCACAAGA+AGG 0.528684 5_2:+13991892 Msa0758650:CDS
AGAAAGAAGCTTCAGTTGGT+TGG 0.531223 5_2:+13990694 Msa0758650:CDS
GCAGCGGCAGCTAGTTGAGA+AGG 0.533466 5_2:-13991314 None:intergenic
TTGTTAACAACACAAGGATA+AGG 0.536421 5_2:-13988766 None:intergenic
ATAGGAGGAAGTTGAGATGG+AGG 0.543444 5_2:+13989767 Msa0758650:intron
CGGTTCATCGACCCATCACT+AGG 0.545956 5_2:+13988942 Msa0758650:CDS
GAACCTTCTCATGAAAACAT+AGG 0.546868 5_2:-13991082 None:intergenic
GATTAATCAGAATTTGGTTG+TGG 0.548543 5_2:+13988735 Msa0758650:CDS
AATCATTAGTAGCTAAGCTA+TGG 0.551986 5_2:-13992026 None:intergenic
ATCCTTGTGTTGTTAACAAG+AGG 0.554542 5_2:+13988770 Msa0758650:CDS
GGAGGATCAGCCAGTGCCAA+TGG 0.555755 5_2:+13989603 Msa0758650:CDS
CTCATGAAAACATAGGCTGT+TGG 0.556150 5_2:-13991075 None:intergenic
CTCTTACTACAGAAAAGTTG+AGG 0.560855 5_2:+13989875 Msa0758650:CDS
TGAGAGCTATACTGGTTGAC+TGG 0.562836 5_2:+13990385 Msa0758650:CDS
CTGGGACAGGGAAACTTACA+GGG 0.564816 5_2:+13991915 Msa0758650:CDS
AGCAATTTGACATTAATGAA+AGG 0.565905 5_2:+13990361 Msa0758650:CDS
TCCTTGTGTTGTTAACAAGA+GGG 0.566377 5_2:+13988771 Msa0758650:CDS
TTGAATAGGGAACTACCAAA+AGG 0.566910 5_2:+13989509 Msa0758650:intron
CAAGAGGGTCATTTGCATCA+GGG 0.569803 5_2:-13989824 None:intergenic
TTGACTTTCACAAGAAGGCT+GGG 0.569949 5_2:+13991897 Msa0758650:CDS
GAAGTTTCAGTGCCTGTGGT+TGG 0.581724 5_2:+13990751 Msa0758650:CDS
GTAAGCAACTTGGGTTGCAA+TGG 0.583489 5_2:+13992092 Msa0758650:three_prime_UTR
GGAAGATCCTAGAAGAAGAA+GGG 0.583641 5_2:-13988456 None:intergenic
GGTAAGAAAGAAGCTTCAGT+TGG 0.588907 5_2:+13990690 Msa0758650:CDS
TCAATTCCTCACCTAGTGAT+GGG 0.589190 5_2:-13988953 None:intergenic
CATGAGAAGGTTCTTAAAGG+CGG 0.594323 5_2:+13991092 Msa0758650:CDS
AAGAGGGTCATTTGCATCAG+GGG 0.596917 5_2:-13989823 None:intergenic
ATATATTCAGCAACTGCAAG+AGG 0.601219 5_2:-13989840 None:intergenic
GGAAACTTACAGGGGCACAT+AGG 0.604588 5_2:+13991924 Msa0758650:CDS
GCATAGCGAATCAGATCGGA+TGG 0.604904 5_2:+13989648 Msa0758650:CDS
TCAAACCTTCAAAATTTGTG+GGG 0.605336 5_2:-13988555 None:intergenic
GCCCTCTTGTTAACAACACA+AGG 0.607827 5_2:-13988772 None:intergenic
GACAAGTAAAACACTGAGTG+AGG 0.608578 5_2:-13992150 None:intergenic
AGAATTAGATCTCCAACCAC+AGG 0.618555 5_2:-13990763 None:intergenic
CAATGCATAGCGAATCAGAT+CGG 0.621608 5_2:+13989644 Msa0758650:CDS
TATCAGACAGAGCATACACC+CGG 0.634548 5_2:+13990788 Msa0758650:CDS
AGTGGAGTAAGACATGTGAA+TGG 0.637958 5_2:+13991375 Msa0758650:CDS
TTCACAAGAAGGCTGGGACA+GGG 0.640634 5_2:+13991903 Msa0758650:CDS
TGAGGAAGTTTCAGTGCCTG+TGG 0.654299 5_2:+13990747 Msa0758650:CDS
TATATTCAGCAACTGCAAGA+GGG 0.655321 5_2:-13989839 None:intergenic
TGATGAACACAAGCCAGTGG+AGG 0.670864 5_2:+13989585 Msa0758650:CDS
GAAACAATGTCTCATGCATG+AGG 0.677202 5_2:-13990624 None:intergenic
CTATGTATGGTGTCAAACAG+TGG 0.683237 5_2:+13991357 Msa0758650:CDS
TTGAGCTGTATAGACAGCAG+CGG 0.686693 5_2:-13991330 None:intergenic
TGATGATGAACACAAGCCAG+TGG 0.720589 5_2:+13989582 Msa0758650:CDS
TGTTTGTGAGAAGAAACAAG+CGG 0.747744 5_2:+13988916 Msa0758650:CDS
AAGCAACTTGGGTTGCAATG+GGG 0.774444 5_2:+13992094 Msa0758650:three_prime_UTR
TGGGACAGGGAAACTTACAG+GGG 0.785422 5_2:+13991916 Msa0758650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATAATTGAATTTAA+TGG + chr5_2:13990033-13990052 Msa0758650:intron 10.0%
!! AAAGATTGAAAATTTCAAAA+TGG + chr5_2:13988616-13988635 Msa0758650:intron 15.0%
!! AAGATTGAAAATTTCAAAAT+GGG + chr5_2:13988617-13988636 Msa0758650:intron 15.0%
!!! TTAATTGTTTTTGTGATAAT+AGG + chr5_2:13988664-13988683 Msa0758650:intron 15.0%
!!! AATATCTTTGTTTTTTCTTA+TGG - chr5_2:13989043-13989062 None:intergenic 15.0%
!!! ATTTGGATTTTATTTCAAAT+GGG + chr5_2:13989936-13989955 Msa0758650:intron 15.0%
!!! GTTTTTTCTCAAATTATTAT+AGG - chr5_2:13990018-13990037 None:intergenic 15.0%
!! ATTAGTTATTGAAATTTGAT+TGG - chr5_2:13990289-13990308 None:intergenic 15.0%
!! CTAGTTATGATAAAAAAAAA+TGG - chr5_2:13991171-13991190 None:intergenic 15.0%
!! ACTATATAAAAAAAAGGTTA+TGG - chr5_2:13991794-13991813 None:intergenic 15.0%
!! AAACAATTAACTTTCATAAA+TGG + chr5_2:13992056-13992075 Msa0758650:three_prime_UTR 15.0%
!! AACAATTAACTTTCATAAAT+GGG + chr5_2:13992057-13992076 Msa0758650:three_prime_UTR 15.0%
!!! AGGTTTGATAATGATTTTTA+TGG + chr5_2:13988570-13988589 Msa0758650:intron 20.0%
!!! GGTTTGATAATGATTTTTAT+GGG + chr5_2:13988571-13988590 Msa0758650:intron 20.0%
!!! ATAATGATTTTTATGGGATT+TGG + chr5_2:13988577-13988596 Msa0758650:intron 20.0%
!! GAAATTCAAATTACACTAAA+GGG - chr5_2:13989008-13989027 None:intergenic 20.0%
!! AGAAATTCAAATTACACTAA+AGG - chr5_2:13989009-13989028 None:intergenic 20.0%
!! TTTAGTGTAATTTGAATTTC+TGG + chr5_2:13989008-13989027 Msa0758650:intron 20.0%
!! TCTTGATTTACTGTTATATT+AGG + chr5_2:13989356-13989375 Msa0758650:intron 20.0%
!! CAACAACTAAAATTTGAAAA+AGG - chr5_2:13989727-13989746 None:intergenic 20.0%
!!! TATCAAATAATTGGTCTTAT+AGG + chr5_2:13989749-13989768 Msa0758650:intron 20.0%
!!! CATTTGGATTTTATTTCAAA+TGG + chr5_2:13989935-13989954 Msa0758650:intron 20.0%
!! GAGAGAATTTCAATATTAAT+TGG - chr5_2:13990267-13990286 None:intergenic 20.0%
!! ATTAATCCTATATTTAATCC+AGG - chr5_2:13990477-13990496 None:intergenic 20.0%
!! AGTGATCATTATCAATATTT+GGG - chr5_2:13990564-13990583 None:intergenic 20.0%
!! AAGTGATCATTATCAATATT+TGG - chr5_2:13990565-13990584 None:intergenic 20.0%
!! CAATATTAAGATTAAGGTTT+AGG - chr5_2:13990944-13990963 None:intergenic 20.0%
!! AAACCTTAATCTTAATATTG+CGG + chr5_2:13990944-13990963 Msa0758650:intron 20.0%
!! TATGATAAAAAAAAATGGCA+TGG - chr5_2:13991166-13991185 None:intergenic 20.0%
!! GTATTTGTAATTAGTAACTA+TGG - chr5_2:13991199-13991218 None:intergenic 20.0%
!! ATATAACAAAATGACATCAT+AGG + chr5_2:13991723-13991742 Msa0758650:intron 20.0%
!! TATAACAAAATGACATCATA+GGG + chr5_2:13991724-13991743 Msa0758650:intron 20.0%
!! TTTCCATTATTATGTTCAAT+GGG - chr5_2:13992247-13992266 None:intergenic 20.0%
!! ATTTCCATTATTATGTTCAA+TGG - chr5_2:13992248-13992267 None:intergenic 20.0%
!!! TTCCATTTTTTTTTCCTTCA+AGG + chr5_2:13988418-13988437 Msa0758650:five_prime_UTR 25.0%
! ATCCTTGAAGGAAAAAAAAA+TGG - chr5_2:13988423-13988442 None:intergenic 25.0%
!!! GATCTTCCAATTTTTTTTGT+GGG + chr5_2:13988471-13988490 Msa0758650:five_prime_UTR 25.0%
! ATCAAACCTTCAAAATTTGT+GGG - chr5_2:13988559-13988578 None:intergenic 25.0%
! TATCAAACCTTCAAAATTTG+TGG - chr5_2:13988560-13988579 None:intergenic 25.0%
!!! ATTGTTTTTGTGATAATAGG+AGG + chr5_2:13988667-13988686 Msa0758650:intron 25.0%
!!! TTGTTTTTGTGATAATAGGA+GGG + chr5_2:13988668-13988687 Msa0758650:intron 25.0%
! ATTCACAATCACAAAAAGAA+GGG - chr5_2:13988833-13988852 None:intergenic 25.0%
! AATTCACAATCACAAAAAGA+AGG - chr5_2:13988834-13988853 None:intergenic 25.0%
!!! TGTGAATTTGTTTTCTTTTG+TGG + chr5_2:13988846-13988865 Msa0758650:intron 25.0%
!! TTGTTTTCTTTTGTGGTTTT+TGG + chr5_2:13988853-13988872 Msa0758650:intron 25.0%
!!! TGGTTTTTGGTTTTGATTTA+TGG + chr5_2:13988866-13988885 Msa0758650:intron 25.0%
!! GAATTGATGATTTAAGTTTC+TGG + chr5_2:13988969-13988988 Msa0758650:intron 25.0%
!! TGTAATTTGAATTTCTGGAT+TGG + chr5_2:13989013-13989032 Msa0758650:intron 25.0%
! TTGAGATAAGTGTTTGAATT+TGG + chr5_2:13989061-13989080 Msa0758650:intron 25.0%
!!! ATGCTACATAGTTTTTGATT+TGG - chr5_2:13989099-13989118 None:intergenic 25.0%
!! AAGTTTTGCTAAAATGATGA+TGG + chr5_2:13989328-13989347 Msa0758650:intron 25.0%
! TGATTTACTGTTATATTAGG+AGG + chr5_2:13989359-13989378 Msa0758650:intron 25.0%
! AATGTAGCAAAATTTCACAA+AGG - chr5_2:13989442-13989461 None:intergenic 25.0%
! CATTCAAAATCTTAGTCAAA+AGG - chr5_2:13989478-13989497 None:intergenic 25.0%
!! TTGACTAAGATTTTGAATGT+TGG + chr5_2:13989479-13989498 Msa0758650:intron 25.0%
!! TGACTAAGATTTTGAATGTT+GGG + chr5_2:13989480-13989499 Msa0758650:intron 25.0%
! TTAGCAAAATCAAGTTCAAA+TGG + chr5_2:13989538-13989557 Msa0758650:CDS 25.0%
!! AAATCAAGTTCAAATGGATT+TGG + chr5_2:13989544-13989563 Msa0758650:CDS 25.0%
!! GTTGTTGACTATCAAATAAT+TGG + chr5_2:13989740-13989759 Msa0758650:intron 25.0%
! TATTTCAAATGGGATATATG+AGG + chr5_2:13989946-13989965 Msa0758650:intron 25.0%
! TCTAATTAGTGAGAGAATTT+AGG - chr5_2:13990194-13990213 None:intergenic 25.0%
! ATAAAAGTGATATACTCCTA+TGG - chr5_2:13990217-13990236 None:intergenic 25.0%
! AGCAATTTGACATTAATGAA+AGG + chr5_2:13990361-13990380 Msa0758650:CDS 25.0%
!!! CAAGTCAATAGCATTTTTTA+AGG - chr5_2:13990451-13990470 None:intergenic 25.0%
! TGATCATTATCAATATTTGG+GGG - chr5_2:13990562-13990581 None:intergenic 25.0%
! GTGATCATTATCAATATTTG+GGG - chr5_2:13990563-13990582 None:intergenic 25.0%
!! CAATCTTATAGACAGATTTT+TGG + chr5_2:13990654-13990673 Msa0758650:CDS 25.0%
!! ATTTGTGTGTAAAATTTTGC+AGG + chr5_2:13991011-13991030 Msa0758650:intron 25.0%
! AAATGGCATGGAAATATATT+AGG - chr5_2:13991154-13991173 None:intergenic 25.0%
! ATGGGAATTTACTAATACTA+AGG + chr5_2:13992117-13992136 Msa0758650:three_prime_UTR 25.0%
ATGAAAAAGAAGATCCTTGA+AGG - chr5_2:13988435-13988454 None:intergenic 30.0%
!!! GGATCTTCCAATTTTTTTTG+TGG + chr5_2:13988470-13988489 Msa0758650:five_prime_UTR 30.0%
ACACAACCCACAAAAAAAAT+TGG - chr5_2:13988480-13988499 None:intergenic 30.0%
! GAAGAAAATGAAGTTTTCTG+AGG + chr5_2:13988516-13988535 Msa0758650:exon 30.0%
TCAAACCTTCAAAATTTGTG+GGG - chr5_2:13988558-13988577 None:intergenic 30.0%
GATTAATCAGAATTTGGTTG+TGG + chr5_2:13988735-13988754 Msa0758650:CDS 30.0%
TTGTTAACAACACAAGGATA+AGG - chr5_2:13988769-13988788 None:intergenic 30.0%
!!! TGGTTTTGATTTATGGTTTG+TGG + chr5_2:13988873-13988892 Msa0758650:intron 30.0%
!!! GGTTTTGATTTATGGTTTGT+GGG + chr5_2:13988874-13988893 Msa0758650:intron 30.0%
!! GATGATTTAAGTTTCTGGTT+TGG + chr5_2:13988974-13988993 Msa0758650:intron 30.0%
! GCATTGACAATTCAGATTAT+TGG + chr5_2:13989115-13989134 Msa0758650:intron 30.0%
! TTTAACCACATCTGATAATG+TGG - chr5_2:13989170-13989189 None:intergenic 30.0%
!! TCATTTTAGCAAAACTTGCA+TGG - chr5_2:13989325-13989344 None:intergenic 30.0%
! GACTAAGATTTTGAATGTTG+GGG + chr5_2:13989481-13989500 Msa0758650:intron 30.0%
! TTTTGCTAAGTTTGACCTTT+TGG - chr5_2:13989527-13989546 None:intergenic 30.0%
!! CAAATAATTGGTCTTATAGG+AGG + chr5_2:13989752-13989771 Msa0758650:intron 30.0%
AGAACACTTATCTGATCATT+TGG + chr5_2:13989919-13989938 Msa0758650:intron 30.0%
AAATGCTTCCATTGACATTA+GGG - chr5_2:13990116-13990135 None:intergenic 30.0%
TAAATGCTTCCATTGACATT+AGG - chr5_2:13990117-13990136 None:intergenic 30.0%
TTGCATCCTGGATTAAATAT+AGG + chr5_2:13990468-13990487 Msa0758650:intron 30.0%
TTATCAATATTTGGGGGAAA+TGG - chr5_2:13990556-13990575 None:intergenic 30.0%
!! TAAGATGACTGCAGTTTTAA+AGG - chr5_2:13990865-13990884 None:intergenic 30.0%
!! TCGTCGGAATTTTTAGAAAA+AGG - chr5_2:13990979-13990998 None:intergenic 30.0%
TTTCATGAGAAGGTTCTTAA+AGG + chr5_2:13991089-13991108 Msa0758650:CDS 30.0%
AATCATTAGTAGCTAAGCTA+TGG - chr5_2:13992029-13992048 None:intergenic 30.0%
TAAGAATGTTGTAAGCAACT+TGG + chr5_2:13992082-13992101 Msa0758650:three_prime_UTR 30.0%
AAGAATGTTGTAAGCAACTT+GGG + chr5_2:13992083-13992102 Msa0758650:three_prime_UTR 30.0%
GTTCCCATTGAACATAATAA+TGG + chr5_2:13992241-13992260 Msa0758650:three_prime_UTR 30.0%
! AACAACCCCACAAATTTTGA+AGG + chr5_2:13988550-13988569 Msa0758650:CDS 35.0%
! GGTTAGATTCTAGAAAGGTT+GGG + chr5_2:13988689-13988708 Msa0758650:CDS 35.0%
GGGTGTGATTAATCAGAATT+TGG + chr5_2:13988729-13988748 Msa0758650:CDS 35.0%
AATCAGAATTTGGTTGTGGA+AGG + chr5_2:13988739-13988758 Msa0758650:CDS 35.0%
! ATCCTTGTGTTGTTAACAAG+AGG + chr5_2:13988770-13988789 Msa0758650:CDS 35.0%
! TCCTTGTGTTGTTAACAAGA+GGG + chr5_2:13988771-13988790 Msa0758650:CDS 35.0%
TGTTTGTGAGAAGAAACAAG+CGG + chr5_2:13988916-13988935 Msa0758650:CDS 35.0%
GTGACATGTAGATGTAGATA+CGG - chr5_2:13989229-13989248 None:intergenic 35.0%
GTATCTACATCTACATGTCA+CGG + chr5_2:13989228-13989247 Msa0758650:intron 35.0%
CACAAAAACAACTAATGCTG+AGG + chr5_2:13989402-13989421 Msa0758650:CDS 35.0%
ATGTTGGGGTCAATTTGAAT+AGG + chr5_2:13989495-13989514 Msa0758650:intron 35.0%
TGTTGGGGTCAATTTGAATA+GGG + chr5_2:13989496-13989515 Msa0758650:intron 35.0%
TTGAATAGGGAACTACCAAA+AGG + chr5_2:13989509-13989528 Msa0758650:intron 35.0%
TATATTCAGCAACTGCAAGA+GGG - chr5_2:13989842-13989861 None:intergenic 35.0%
ATATATTCAGCAACTGCAAG+AGG - chr5_2:13989843-13989862 None:intergenic 35.0%
CTCTTACTACAGAAAAGTTG+AGG + chr5_2:13989875-13989894 Msa0758650:CDS 35.0%
CAGAAAAGTTGAGGTACATT+TGG + chr5_2:13989884-13989903 Msa0758650:intron 35.0%
TCTCTCACTAATTAGACCAT+AGG + chr5_2:13990198-13990217 Msa0758650:intron 35.0%
CTGTGTTTCACCAAACTATA+TGG + chr5_2:13990335-13990354 Msa0758650:CDS 35.0%
AATTGCTGTGCCATATAGTT+TGG - chr5_2:13990348-13990367 None:intergenic 35.0%
TTAAGGCATAGTGATTCAGA+AGG - chr5_2:13990434-13990453 None:intergenic 35.0%
ATTTGTCATGCACCTGAAAA+GGG - chr5_2:13990600-13990619 None:intergenic 35.0%
AATTTGTCATGCACCTGAAA+AGG - chr5_2:13990601-13990620 None:intergenic 35.0%
!! ATTTTTGGAAAAGCAGTCTG+TGG + chr5_2:13990669-13990688 Msa0758650:CDS 35.0%
! CAGTCATCTTACATTTTCTG+CGG + chr5_2:13990874-13990893 Msa0758650:intron 35.0%
GGTGACATTGAAAATCTTTG+TGG + chr5_2:13990895-13990914 Msa0758650:intron 35.0%
CTGCCGCAATATTAAGATTA+AGG - chr5_2:13990950-13990969 None:intergenic 35.0%
AAATCTCAGTTACTTGTCGT+CGG - chr5_2:13990995-13991014 None:intergenic 35.0%
! GTGTAAAATTTTGCAGGAGA+AGG + chr5_2:13991017-13991036 Msa0758650:intron 35.0%
GAACCTTCTCATGAAAACAT+AGG - chr5_2:13991085-13991104 None:intergenic 35.0%
! TCTAGTTCCAACTAAATCGA+AGG + chr5_2:13991453-13991472 Msa0758650:intron 35.0%
GAATAAGCCTTCGATTTAGT+TGG - chr5_2:13991463-13991482 None:intergenic 35.0%
! CAGAGAATGCTCTAGTTTAA+TGG + chr5_2:13991874-13991893 Msa0758650:intron 35.0%
! AATGGTTGACTTTCACAAGA+AGG + chr5_2:13991892-13991911 Msa0758650:CDS 35.0%
TTTCATGCCCTTCTTCTTCT+AGG + chr5_2:13988449-13988468 Msa0758650:five_prime_UTR 40.0%
GGAAGATCCTAGAAGAAGAA+GGG - chr5_2:13988459-13988478 None:intergenic 40.0%
TGGAAGATCCTAGAAGAAGA+AGG - chr5_2:13988460-13988479 None:intergenic 40.0%
! AGGAGGGTTAGATTCTAGAA+AGG + chr5_2:13988684-13988703 Msa0758650:intron 40.0%
! GGGTTAGATTCTAGAAAGGT+TGG + chr5_2:13988688-13988707 Msa0758650:CDS 40.0%
TCAATTCCTCACCTAGTGAT+GGG - chr5_2:13988956-13988975 None:intergenic 40.0%
ATCAATTCCTCACCTAGTGA+TGG - chr5_2:13988957-13988976 None:intergenic 40.0%
!! TCTGTTTGCTCTAAAGCCAT+TGG - chr5_2:13989622-13989641 None:intergenic 40.0%
CAATGCATAGCGAATCAGAT+CGG + chr5_2:13989644-13989663 Msa0758650:CDS 40.0%
CTTATAGGAGGAAGTTGAGA+TGG + chr5_2:13989764-13989783 Msa0758650:intron 40.0%
AGTTGAGATGGAGGATATCA+TGG + chr5_2:13989776-13989795 Msa0758650:CDS 40.0%
TATCATGGAAGAGCCTGTTA+TGG + chr5_2:13989791-13989810 Msa0758650:CDS 40.0%
TGAAAGGATGAGAGCTATAC+TGG + chr5_2:13990377-13990396 Msa0758650:CDS 40.0%
!! AATGCTATTGACTTGCATCC+TGG + chr5_2:13990456-13990475 Msa0758650:intron 40.0%
! GTTTTGCATGAACCCTTTTC+AGG + chr5_2:13990585-13990604 Msa0758650:intron 40.0%
GAAACAATGTCTCATGCATG+AGG - chr5_2:13990627-13990646 None:intergenic 40.0%
GGTAAGAAAGAAGCTTCAGT+TGG + chr5_2:13990690-13990709 Msa0758650:CDS 40.0%
AGAAAGAAGCTTCAGTTGGT+TGG + chr5_2:13990694-13990713 Msa0758650:CDS 40.0%
AGAATTAGATCTCCAACCAC+AGG - chr5_2:13990766-13990785 None:intergenic 40.0%
CATTTCCAGAACTTCTTTCC+GGG - chr5_2:13990809-13990828 None:intergenic 40.0%
CCATTTCCAGAACTTCTTTC+CGG - chr5_2:13990810-13990829 None:intergenic 40.0%
! AATTTTGCAGGAGAAGGTGA+TGG + chr5_2:13991023-13991042 Msa0758650:intron 40.0%
CTCATGAAAACATAGGCTGT+TGG - chr5_2:13991078-13991097 None:intergenic 40.0%
! CAGCCTATGTTTTCATGAGA+AGG + chr5_2:13991079-13991098 Msa0758650:CDS 40.0%
CATGAGAAGGTTCTTAAAGG+CGG + chr5_2:13991092-13991111 Msa0758650:CDS 40.0%
ACAGCTCAATGCACTATGTA+TGG + chr5_2:13991344-13991363 Msa0758650:CDS 40.0%
! CTATGTATGGTGTCAAACAG+TGG + chr5_2:13991357-13991376 Msa0758650:CDS 40.0%
AGTGGAGTAAGACATGTGAA+TGG + chr5_2:13991375-13991394 Msa0758650:CDS 40.0%
! GAGTTGATCTTCAGAGTAGT+TGG - chr5_2:13991405-13991424 None:intergenic 40.0%
AAAACTATGCGCAATTGCGT+TGG + chr5_2:13991495-13991514 Msa0758650:intron 40.0%
GAGATCAAAAGACTATGCGT+CGG + chr5_2:13991647-13991666 Msa0758650:intron 40.0%
TTGACTTTCACAAGAAGGCT+GGG + chr5_2:13991897-13991916 Msa0758650:CDS 40.0%
! TGAACCAGCAAGTTTTCTTC+TGG + chr5_2:13991985-13992004 Msa0758650:CDS 40.0%
TTCTCCAGAAGAAAACTTGC+TGG - chr5_2:13991992-13992011 None:intergenic 40.0%
! TAAGCAACTTGGGTTGCAAT+GGG + chr5_2:13992093-13992112 Msa0758650:three_prime_UTR 40.0%
GACAAGTAAAACACTGAGTG+AGG - chr5_2:13992153-13992172 None:intergenic 40.0%
! TGGGCAAAACAGAAGAGCAT+TGG + chr5_2:13988708-13988727 Msa0758650:CDS 45.0%
!! GGGCAAAACAGAAGAGCATT+GGG + chr5_2:13988709-13988728 Msa0758650:CDS 45.0%
GCCCTCTTGTTAACAACACA+AGG - chr5_2:13988775-13988794 None:intergenic 45.0%
! ATGGTTTGTGGGTGTATCAC+AGG + chr5_2:13988885-13988904 Msa0758650:intron 45.0%
TGAGAAGAAACAAGCGGATC+CGG + chr5_2:13988922-13988941 Msa0758650:CDS 45.0%
! CACATCTGATAATGTGGCGT+CGG - chr5_2:13989164-13989183 None:intergenic 45.0%
! TGATGATGAACACAAGCCAG+TGG + chr5_2:13989582-13989601 Msa0758650:CDS 45.0%
! CGATCTGATTCGCTATGCAT+TGG - chr5_2:13989646-13989665 None:intergenic 45.0%
ATAGGAGGAAGTTGAGATGG+AGG + chr5_2:13989767-13989786 Msa0758650:intron 45.0%
AAGAGGGTCATTTGCATCAG+GGG - chr5_2:13989826-13989845 None:intergenic 45.0%
CAAGAGGGTCATTTGCATCA+GGG - chr5_2:13989827-13989846 None:intergenic 45.0%
CTATGTGTCAGTGTGGTGTA+TGG - chr5_2:13989992-13990011 None:intergenic 45.0%
TAGGTGTCTATGTGTCAGTG+TGG - chr5_2:13989999-13990018 None:intergenic 45.0%
TGGTTGAGCCCTAATGTCAA+TGG + chr5_2:13990105-13990124 Msa0758650:intron 45.0%
! TGAGAGCTATACTGGTTGAC+TGG + chr5_2:13990385-13990404 Msa0758650:CDS 45.0%
!! ACTGGTTGACTGGCTTATTG+AGG + chr5_2:13990395-13990414 Msa0758650:CDS 45.0%
! TGGTCTAGTGGCAATGCTTT+TGG + chr5_2:13990714-13990733 Msa0758650:CDS 45.0%
! GCTTTTGGCATGCAAGTATG+AGG + chr5_2:13990729-13990748 Msa0758650:CDS 45.0%
TATCAGACAGAGCATACACC+CGG + chr5_2:13990788-13990807 Msa0758650:CDS 45.0%
ATACACCCGGAAAGAAGTTC+TGG + chr5_2:13990801-13990820 Msa0758650:CDS 45.0%
!! CCGGAAAGAAGTTCTGGAAA+TGG + chr5_2:13990807-13990826 Msa0758650:CDS 45.0%
! TAGCAGCTCAAGCTGTTTCA+TGG - chr5_2:13991240-13991259 None:intergenic 45.0%
TTGAGCTGTATAGACAGCAG+CGG - chr5_2:13991333-13991352 None:intergenic 45.0%
! GTTGACTTTCACAAGAAGGC+TGG + chr5_2:13991896-13991915 Msa0758650:CDS 45.0%
TCTGGAGAATGAGTTGTAGC+TGG + chr5_2:13992003-13992022 Msa0758650:exon 45.0%
! GTAAGCAACTTGGGTTGCAA+TGG + chr5_2:13992092-13992111 Msa0758650:three_prime_UTR 45.0%
! AAGCAACTTGGGTTGCAATG+GGG + chr5_2:13992094-13992113 Msa0758650:three_prime_UTR 45.0%
!! ATAATAACTATATAAAAAAA+AGG - chr5_2:13991800-13991819 None:intergenic 5.0%
!! CTAGTGATGGGTCGATGAAC+CGG - chr5_2:13988944-13988963 None:intergenic 50.0%
CGACGCCACATTATCAGATG+TGG + chr5_2:13989162-13989181 Msa0758650:intron 50.0%
TGATGAACACAAGCCAGTGG+AGG + chr5_2:13989585-13989604 Msa0758650:CDS 50.0%
!! TGCTCTAAAGCCATTGGCAC+TGG - chr5_2:13989616-13989635 None:intergenic 50.0%
GCATAGCGAATCAGATCGGA+TGG + chr5_2:13989648-13989667 Msa0758650:CDS 50.0%
! GGGGTGTCAATGTCCATAAC+AGG - chr5_2:13989807-13989826 None:intergenic 50.0%
GCAAGAGGGTCATTTGCATC+AGG - chr5_2:13989828-13989847 None:intergenic 50.0%
ACATTAGGGCTCAACCAGAG+TGG - chr5_2:13990102-13990121 None:intergenic 50.0%
!! GCTTCAGTTGGTTGGTCTAG+TGG + chr5_2:13990702-13990721 Msa0758650:CDS 50.0%
TGAGGAAGTTTCAGTGCCTG+TGG + chr5_2:13990747-13990766 Msa0758650:CDS 50.0%
GAAGTTTCAGTGCCTGTGGT+TGG + chr5_2:13990751-13990770 Msa0758650:CDS 50.0%
TTTCACAAGAAGGCTGGGAC+AGG + chr5_2:13991902-13991921 Msa0758650:CDS 50.0%
TTCACAAGAAGGCTGGGACA+GGG + chr5_2:13991903-13991922 Msa0758650:CDS 50.0%
CTGGGACAGGGAAACTTACA+GGG + chr5_2:13991915-13991934 Msa0758650:CDS 50.0%
TGGGACAGGGAAACTTACAG+GGG + chr5_2:13991916-13991935 Msa0758650:CDS 50.0%
! GGAAACTTACAGGGGCACAT+AGG + chr5_2:13991924-13991943 Msa0758650:CDS 50.0%
! AACTTGGGTTGCAATGGGGA+TGG + chr5_2:13992098-13992117 Msa0758650:three_prime_UTR 50.0%
! ACTTGGGTTGCAATGGGGAT+GGG + chr5_2:13992099-13992118 Msa0758650:three_prime_UTR 50.0%
CGGTTCATCGACCCATCACT+AGG + chr5_2:13988942-13988961 Msa0758650:CDS 55.0%
CATCGACCCATCACTAGGTG+AGG + chr5_2:13988947-13988966 Msa0758650:intron 55.0%
CACGGTGTCTCTGTCATGTC+AGG + chr5_2:13989246-13989265 Msa0758650:intron 55.0%
ACACCTGTCCACATCCACTC+TGG + chr5_2:13990085-13990104 Msa0758650:intron 55.0%
CAACCAGAGTGGATGTGGAC+AGG - chr5_2:13990091-13990110 None:intergenic 55.0%
GCTGGGACAGGGAAACTTAC+AGG + chr5_2:13991914-13991933 Msa0758650:CDS 55.0%
GGAGGATCAGCCAGTGCCAA+TGG + chr5_2:13989603-13989622 Msa0758650:CDS 60.0%
GGGCTCAACCAGAGTGGATG+TGG - chr5_2:13990096-13990115 None:intergenic 60.0%
GCAGCGGCAGCTAGTTGAGA+AGG - chr5_2:13991317-13991336 None:intergenic 60.0%
!! GGCACTGGCTGATCCTCCAC+TGG - chr5_2:13989601-13989620 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 13988373 13992303 13988373 ID=Msa0758650;Name=Msa0758650
chr5_2 mRNA 13988373 13992303 13988373 ID=Msa0758650-mRNA-1;Parent=Msa0758650;Name=Msa0758650-mRNA-1;_AED=0.11;_eAED=0.11;_QI=150|1|1|1|1|1|11|282|427
chr5_2 exon 13988373 13988571 13988373 ID=Msa0758650-mRNA-1:exon:6311;Parent=Msa0758650-mRNA-1
chr5_2 exon 13988686 13988803 13988686 ID=Msa0758650-mRNA-1:exon:6312;Parent=Msa0758650-mRNA-1
chr5_2 exon 13988907 13988963 13988907 ID=Msa0758650-mRNA-1:exon:6313;Parent=Msa0758650-mRNA-1
chr5_2 exon 13989378 13989423 13989378 ID=Msa0758650-mRNA-1:exon:6314;Parent=Msa0758650-mRNA-1
chr5_2 exon 13989517 13989669 13989517 ID=Msa0758650-mRNA-1:exon:6315;Parent=Msa0758650-mRNA-1
chr5_2 exon 13989771 13989896 13989771 ID=Msa0758650-mRNA-1:exon:6316;Parent=Msa0758650-mRNA-1
chr5_2 exon 13990327 13990416 13990327 ID=Msa0758650-mRNA-1:exon:6317;Parent=Msa0758650-mRNA-1
chr5_2 exon 13990607 13990828 13990607 ID=Msa0758650-mRNA-1:exon:6318;Parent=Msa0758650-mRNA-1
chr5_2 exon 13991033 13991131 13991033 ID=Msa0758650-mRNA-1:exon:6319;Parent=Msa0758650-mRNA-1
chr5_2 exon 13991248 13991426 13991248 ID=Msa0758650-mRNA-1:exon:6320;Parent=Msa0758650-mRNA-1
chr5_2 exon 13991877 13992303 13991877 ID=Msa0758650-mRNA-1:exon:6321;Parent=Msa0758650-mRNA-1
chr5_2 five_prime_UTR 13988373 13988522 13988373 ID=Msa0758650-mRNA-1:five_prime_utr;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13988523 13988571 13988523 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13988686 13988803 13988686 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13988907 13988963 13988907 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13989378 13989423 13989378 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13989517 13989669 13989517 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13989771 13989896 13989771 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13990327 13990416 13990327 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13990607 13990828 13990607 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13991033 13991131 13991033 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13991248 13991426 13991248 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 CDS 13991877 13992021 13991877 ID=Msa0758650-mRNA-1:cds;Parent=Msa0758650-mRNA-1
chr5_2 three_prime_UTR 13992022 13992303 13992022 ID=Msa0758650-mRNA-1:three_prime_utr;Parent=Msa0758650-mRNA-1
Gene Sequence

>Msa0758650

ATGAAGTTTTCTGAGGAGAATGTTTCTAACAACCCCACAAATTTTGAAGGAGGGTTAGATTCTAGAAAGGTTGGGCAAAACAGAAGAGCATTGGGTGTGATTAATCAGAATTTGGTTGTGGAAGGACGTCCTTATCCTTGTGTTGTTAACAAGAGGGCATTGTCAGAGAGAAATGATGTTTGTGAGAAGAAACAAGCGGATCCGGTTCATCGACCCATCACTAGGAGGTTTGCTGCAAAGATTGCTAACACAAAAACAACTAATGCTGAGGGAACTACCAAAAGGTCAAACTTAGCAAAATCAAGTTCAAATGGATTTGGAGATTTCATATTTGTTGATGATGAACACAAGCCAGTGGAGGATCAGCCAGTGCCAATGGCTTTAGAGCAAACAGAACCAATGCATAGCGAATCAGATCGGATGGAGGAAGTTGAGATGGAGGATATCATGGAAGAGCCTGTTATGGACATTGACACCCCTGATGCAAATGACCCTCTTGCAGTTGCTGAATATATCGAAGATCTTTACTCTTACTACAGAAAAGTTGAGAGTACTAGCTGTGTTTCACCAAACTATATGGCACAGCAATTTGACATTAATGAAAGGATGAGAGCTATACTGGTTGACTGGCTTATTGAGGTGCATGACAAATTCGACCTCATGCATGAGACATTGTTTCTCACTGTCAATCTTATAGACAGATTTTTGGAAAAGCAGTCTGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTGGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCAGTGCCTGTGGTTGGAGATCTAATTCTTATATCAGACAGAGCATACACCCGGAAAGAAGTTCTGGAAATGGAGAAGGTGATGGTCAATGCATTGAAGTTTAACATATCTGTGCCAACAGCCTATGTTTTCATGAGAAGGTTCTTAAAGGCGGCTCAAGCAGACAGAAAACTTGAGCTGCTAGCTTTCTTCTTGATTGAGCTATCTCTTGTAGAATATGCAATGTTGAAGTTCTCTCCTTCTCAACTAGCTGCCGCTGCTGTCTATACAGCTCAATGCACTATGTATGGTGTCAAACAGTGGAGTAAGACATGTGAATGGCACACCAACTACTCTGAAGATCAACTCTTAGAATGCTCTAGTTTAATGGTTGACTTTCACAAGAAGGCTGGGACAGGGAAACTTACAGGGGCACATAGGAAGTATTGCACATCAAAATTTAGCTATACTGCGAAATGTGAACCAGCAAGTTTTCTTCTGGAGAATGAGTTGTAG

Protein sequence

>Msa0758650

MKFSEENVSNNPTNFEGGLDSRKVGQNRRALGVINQNLVVEGRPYPCVVNKRALSERNDVCEKKQADPVHRPITRRFAAKIANTKTTNAEGTTKRSNLAKSSSNGFGDFIFVDDEHKPVEDQPVPMALEQTEPMHSESDRMEEVEMEDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTSCVSPNYMAQQFDINERMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRKLELLAFFLIELSLVEYAMLKFSPSQLAAAAVYTAQCTMYGVKQWSKTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRKYCTSKFSYTAKCEPASFLLENEL*