Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854830 | XP_003615974.1 | 96.173 | 993 | 18 | 1 | 1 | 973 | 1 | 993 | 0.0 | 1929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854830 | sp|O24303|TI110_PEA | 85.341 | 996 | 123 | 4 | 1 | 973 | 1 | 996 | 0.0 | 1576 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854830 | G7KFK1 | 96.173 | 993 | 18 | 1 | 1 | 973 | 1 | 993 | 0.0 | 1929 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032120 | Msa0854830 | 0.806782 | 6.960414e-50 | -8.615850e-47 |
| Msa0120330 | Msa0854830 | 0.811673 | 6.223630e-51 | -8.615850e-47 |
| Msa0621120 | Msa0854830 | 0.814872 | 1.234529e-51 | -8.615850e-47 |
| Msa0638280 | Msa0854830 | 0.809422 | 1.907607e-50 | -8.615850e-47 |
| Msa0650090 | Msa0854830 | 0.800821 | 1.203744e-48 | -8.615850e-47 |
| Msa0677290 | Msa0854830 | 0.801469 | 8.872039e-49 | -8.615850e-47 |
| Msa0697400 | Msa0854830 | 0.810652 | 1.036263e-50 | -8.615850e-47 |
| Msa0702350 | Msa0854830 | 0.810959 | 8.891542e-51 | -8.615850e-47 |
| Msa0728280 | Msa0854830 | 0.820833 | 5.564512e-53 | -8.615850e-47 |
| Msa0728380 | Msa0854830 | 0.812088 | 5.055443e-51 | -8.615850e-47 |
| Msa0776480 | Msa0854830 | 0.821270 | 4.413417e-53 | -8.615850e-47 |
| Msa0777050 | Msa0854830 | 0.860154 | 2.517715e-63 | -8.615850e-47 |
| Msa0814150 | Msa0854830 | 0.811102 | 8.282130e-51 | -8.615850e-47 |
| Msa0833040 | Msa0854830 | 0.801497 | 8.755509e-49 | -8.615850e-47 |
| Msa0172330 | Msa0854830 | 0.823851 | 1.108456e-53 | -8.615850e-47 |
| Msa0203160 | Msa0854830 | 0.801946 | 7.083137e-49 | -8.615850e-47 |
| Msa0205850 | Msa0854830 | 0.806821 | 6.829285e-50 | -8.615850e-47 |
| Msa0226890 | Msa0854830 | 0.808275 | 3.354515e-50 | -8.615850e-47 |
| Msa0235890 | Msa0854830 | 0.824367 | 8.386668e-54 | -8.615850e-47 |
| Msa0376510 | Msa0854830 | 0.805791 | 1.125626e-49 | -8.615850e-47 |
| Msa0378080 | Msa0854830 | 0.801565 | 8.480161e-49 | -8.615850e-47 |
| Msa0425050 | Msa0854830 | 0.805849 | 1.094584e-49 | -8.615850e-47 |
| Msa0425940 | Msa0854830 | 0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0468160 | Msa0854830 | 0.830243 | 3.277253e-55 | -8.615850e-47 |
| Msa0470180 | Msa0854830 | 0.809575 | 1.768121e-50 | -8.615850e-47 |
| Msa0302000 | Msa0854830 | 0.801076 | 1.067901e-48 | -8.615850e-47 |
| Msa0349060 | Msa0854830 | 0.803463 | 3.444257e-49 | -8.615850e-47 |
| Msa0358170 | Msa0854830 | 0.802168 | 6.375336e-49 | -8.615850e-47 |
| Msa0518040 | Msa0854830 | 0.807353 | 5.267607e-50 | -8.615850e-47 |
| Msa0526660 | Msa0854830 | 0.812322 | 4.493085e-51 | -8.615850e-47 |
| Msa0526750 | Msa0854830 | 0.802546 | 5.329237e-49 | -8.615850e-47 |
| Msa0546840 | Msa0854830 | 0.851655 | 7.705120e-61 | -8.615850e-47 |
| Msa0564030 | Msa0854830 | 0.801598 | 8.350063e-49 | -8.615850e-47 |
| Msa0576690 | Msa0854830 | 0.836232 | 1.056005e-56 | -8.615850e-47 |
| Msa0577390 | Msa0854830 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa0854830 | Msa0877410 | 0.807229 | 5.598253e-50 | -8.615850e-47 |
| Msa0854830 | Msa0908050 | 0.802451 | 5.576401e-49 | -8.615850e-47 |
| Msa0854830 | Msa1065370 | 0.803314 | 3.697714e-49 | -8.615850e-47 |
| Msa0854830 | Msa1171690 | 0.810348 | 1.205602e-50 | -8.615850e-47 |
| Msa0854830 | Msa1176690 | 0.811314 | 7.450369e-51 | -8.615850e-47 |
| Msa0854830 | Msa1206020 | 0.804593 | 2.005174e-49 | -8.615850e-47 |
| Msa0854830 | Msa1210770 | 0.807885 | 4.062167e-50 | -8.615850e-47 |
| Msa0854830 | Msa1261010 | 0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0854830 | Msa1284520 | 0.804327 | 2.278059e-49 | -8.615850e-47 |
| Msa0854830 | Msa1328850 | 0.811424 | 7.051640e-51 | -8.615850e-47 |
| Msa0854830 | Msa1362510 | 0.813348 | 2.678682e-51 | -8.615850e-47 |
| Msa0854830 | Msa1382310 | 0.802960 | 4.376735e-49 | -8.615850e-47 |
| Msa0854830 | Msa1389950 | 0.812933 | 3.303943e-51 | -8.615850e-47 |
| Msa0854830 | Msa1390270 | 0.851753 | 7.225182e-61 | -8.615850e-47 |
| Msa0854830 | Msa1406040 | 0.804874 | 1.751428e-49 | -8.615850e-47 |
| Msa0854830 | Msa1420060 | 0.808761 | 2.641885e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854830 | MtrunA17_Chr5g0432311 | 96.173 | 993 | 18 | 1 | 1 | 973 | 1 | 993 | 0.0 | 1929 |
| Msa0854830 | MtrunA17_Chr3g0106891 | 72.116 | 997 | 241 | 7 | 1 | 973 | 1 | 984 | 0.0 | 1349 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854830 | AT1G06950.1 | 65.610 | 1009 | 306 | 8 | 1 | 973 | 13 | 1016 | 0.0 | 1298 |
Find 234 sgRNAs with CRISPR-Local
Find 520 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCAGTCCTGTCCCTTTC+TGG | 0.165335 | 5_4:-47666869 | None:intergenic |
| GGTAAGCTGCAGACGGAAAT+AGG | 0.192664 | 5_4:+47667136 | Msa0854830:CDS |
| AAGATTTGAAACTCCTTTAT+AGG | 0.204180 | 5_4:+47663570 | Msa0854830:CDS |
| TATGTGTCAAATATTGTATT+TGG | 0.206419 | 5_4:+47661443 | Msa0854830:CDS |
| GGCTCAATATGAAGCAAATT+AGG | 0.240776 | 5_4:+47667248 | Msa0854830:CDS |
| TGCAGATTCTGCATTACTTT+TGG | 0.246840 | 5_4:-47666603 | None:intergenic |
| TTGACACATATATCAACTTT+TGG | 0.251955 | 5_4:-47661430 | None:intergenic |
| CCTGGTGGGGAGGAGCTTAA+AGG | 0.260189 | 5_4:+47661021 | Msa0854830:CDS |
| GTCTTGCTGAGCAAGCTTTC+AGG | 0.264948 | 5_4:+47667053 | Msa0854830:CDS |
| TAGAGAGCATGTAAGGAAAT+TGG | 0.270879 | 5_4:+47662491 | Msa0854830:CDS |
| ATGTGTCAAATATTGTATTT+GGG | 0.277481 | 5_4:+47661444 | Msa0854830:CDS |
| CTCCACTGCAGCTGCACTTC+GGG | 0.281808 | 5_4:+47667793 | Msa0854830:CDS |
| ATCATCTTTAAGAGTAATTT+CGG | 0.288263 | 5_4:-47666843 | None:intergenic |
| GCTGCTGCTGTTGGTGTTGC+CGG | 0.308684 | 5_4:+47660329 | Msa0854830:CDS |
| ATATTCACCGTTAAACAAAA+TGG | 0.314233 | 5_4:-47667946 | None:intergenic |
| AAGAAATAATGGATGTTCAT+AGG | 0.316350 | 5_4:+47667029 | Msa0854830:CDS |
| ATTGGTTGAGGAAAATATTT+CGG | 0.317514 | 5_4:+47662509 | Msa0854830:CDS |
| GTGTTGAAGTTGGTGTTTAT+AGG | 0.317835 | 5_4:-47659962 | None:intergenic |
| TTCTTCCCTCAACAACTTGC+TGG | 0.319849 | 5_4:+47667631 | Msa0854830:CDS |
| AGATTTGAAACTCCTTTATA+GGG | 0.320836 | 5_4:+47663571 | Msa0854830:CDS |
| TGTTGAAGTTGGTGTTTATA+GGG | 0.328160 | 5_4:-47659961 | None:intergenic |
| TTCTTGACTTACTGTCTAAC+TGG | 0.328545 | 5_4:+47666902 | Msa0854830:CDS |
| TGGATCACTCTTCAAGTATA+TGG | 0.340774 | 5_4:-47667723 | None:intergenic |
| ATGTTACAACAAAGGTTTAT+CGG | 0.352381 | 5_4:+47664424 | Msa0854830:CDS |
| CTGAAACATATGCCCTATAA+AGG | 0.363061 | 5_4:-47663583 | None:intergenic |
| AATGACTGGCAAAGAAATAA+TGG | 0.365011 | 5_4:+47667018 | Msa0854830:CDS |
| ACTATCCAACTCGCTCATTC+AGG | 0.366476 | 5_4:+47667474 | Msa0854830:CDS |
| GCAATTGGTGCAGGGGTTGA+TGG | 0.368876 | 5_4:+47666356 | Msa0854830:CDS |
| TCAGGCAACGGCTTGAAGTT+GGG | 0.370852 | 5_4:+47661253 | Msa0854830:CDS |
| TACGGTCTCGGTTCAAGATT+CGG | 0.371920 | 5_4:+47660278 | Msa0854830:CDS |
| GAAGCAAATTAGGGAACTTA+AGG | 0.378789 | 5_4:+47667258 | Msa0854830:CDS |
| AAATCAGCTTGGTGGGATCC+TGG | 0.380180 | 5_4:+47666994 | Msa0854830:CDS |
| ACGAAAATGAAGAAGATAGA+AGG | 0.381599 | 5_4:-47659934 | None:intergenic |
| ATATGTACACCAGCAGCATC+TGG | 0.388081 | 5_4:-47661096 | None:intergenic |
| ACCTCCGCCGTCATCGTTGC+CGG | 0.388819 | 5_4:+47660239 | Msa0854830:CDS |
| TTGAGGAAATTGATGAAGAA+TGG | 0.392979 | 5_4:+47666747 | Msa0854830:CDS |
| GCTCAATATGAAGCAAATTA+GGG | 0.397939 | 5_4:+47667249 | Msa0854830:CDS |
| AATTTACCCACTAAAGAAAC+TGG | 0.401010 | 5_4:-47663411 | None:intergenic |
| GTCGTCGTTGAGTGCGTAAA+GGG | 0.406399 | 5_4:-47660079 | None:intergenic |
| CAAAGAACTTATAGAAAAGA+TGG | 0.406705 | 5_4:+47666805 | Msa0854830:CDS |
| GTTGCCGGCGCGGTTGCAGC+TGG | 0.406985 | 5_4:+47660254 | Msa0854830:CDS |
| CATCATCTTTCCTTCTACCT+TGG | 0.408279 | 5_4:+47661471 | Msa0854830:CDS |
| AGAAATAATGGATGTTCATA+GGG | 0.412819 | 5_4:+47667030 | Msa0854830:CDS |
| TTTCAGTCCTGGAGTGAGCC+AGG | 0.413395 | 5_4:+47663293 | Msa0854830:intron |
| TACCTTCACAGACACTTTCA+TGG | 0.414571 | 5_4:+47667669 | Msa0854830:CDS |
| TTCAGGCAACGGCTTGAAGT+TGG | 0.420546 | 5_4:+47661252 | Msa0854830:CDS |
| AGAGGAAATTATTGAAATTG+AGG | 0.427525 | 5_4:+47666730 | Msa0854830:CDS |
| TGAGGAGCTTGACAAGGTAT+TGG | 0.428586 | 5_4:+47663320 | Msa0854830:CDS |
| GGTGGGATCCTGGGAATGAC+TGG | 0.428723 | 5_4:+47667004 | Msa0854830:CDS |
| GTCTCGTCTGCAGTATCTGT+TGG | 0.433411 | 5_4:+47667760 | Msa0854830:CDS |
| TAGATTGTCAAGGATGCAAT+TGG | 0.433917 | 5_4:+47666341 | Msa0854830:intron |
| AAGTTGCGGCGGTTAATTTG+AGG | 0.440886 | 5_4:+47660390 | Msa0854830:CDS |
| TAGTCATGTAATGAAATGTT+TGG | 0.441564 | 5_4:+47667866 | Msa0854830:exon |
| TGAGGAAATTGATGAAGAAT+GGG | 0.444758 | 5_4:+47666748 | Msa0854830:CDS |
| TTAAAGGCGATGAGGTTGAT+AGG | 0.445336 | 5_4:+47661037 | Msa0854830:CDS |
| GGCGCGGTTGCAGCTGGATA+CGG | 0.448185 | 5_4:+47660260 | Msa0854830:CDS |
| GAAAATATTTCGGTGGCACT+TGG | 0.448405 | 5_4:+47662519 | Msa0854830:CDS |
| ATGGACAGTTGACGAAGGCC+AGG | 0.453747 | 5_4:+47667101 | Msa0854830:CDS |
| GGGTGAGGGTAGTAAAATGG+AGG | 0.453994 | 5_4:-47660057 | None:intergenic |
| AACTGAAGAACCAGCGAAAG+AGG | 0.454382 | 5_4:+47666712 | Msa0854830:CDS |
| TTCTGTGATTCCACCTGGTG+GGG | 0.456002 | 5_4:+47661008 | Msa0854830:CDS |
| TGTTGGTCCAGTTTCTTTAG+TGG | 0.457220 | 5_4:+47663404 | Msa0854830:CDS |
| ACTTGTTTAGAGAGCATGTA+AGG | 0.457297 | 5_4:+47662484 | Msa0854830:CDS |
| GAAGGAAGAGATGATGATGA+TGG | 0.457764 | 5_4:-47659916 | None:intergenic |
| GTCAAGGATGCAATTGGTGC+AGG | 0.458303 | 5_4:+47666347 | Msa0854830:CDS |
| GATCGCCTTGCCCGTGGTGT+TGG | 0.459583 | 5_4:+47663387 | Msa0854830:CDS |
| TTGAGTTACAGCTGTTTCAA+TGG | 0.460307 | 5_4:-47667221 | None:intergenic |
| TTCAAGTGGCGAGTTAGAAA+TGG | 0.464432 | 5_4:+47664467 | Msa0854830:CDS |
| TCAATAATTTCCTCTTTCGC+TGG | 0.467556 | 5_4:-47666722 | None:intergenic |
| CTGTGGTAGTTTGTTTGAAA+AGG | 0.468731 | 5_4:+47665423 | Msa0854830:CDS |
| TTTCTGTGATTCCACCTGGT+GGG | 0.469503 | 5_4:+47661007 | Msa0854830:CDS |
| GTAAGCTGCAGACGGAAATA+GGG | 0.469904 | 5_4:+47667137 | Msa0854830:CDS |
| GTTGGTCCAGTTTCTTTAGT+GGG | 0.470103 | 5_4:+47663405 | Msa0854830:CDS |
| CATCTCATTTAAGAATCATT+CGG | 0.470152 | 5_4:+47663359 | Msa0854830:CDS |
| CACATGGCTTGCGACTTACC+AGG | 0.471651 | 5_4:+47666417 | Msa0854830:CDS |
| GGCGGTCGTTGCGGTTGTGA+TGG | 0.472015 | 5_4:-47660155 | None:intergenic |
| CAGGCAACGGCTTGAAGTTG+GGG | 0.474475 | 5_4:+47661254 | Msa0854830:CDS |
| CGATGCTTCGAAATTGAAGA+AGG | 0.476839 | 5_4:+47660433 | Msa0854830:CDS |
| ATTGGTGGTGCTGCTGCTGT+TGG | 0.476987 | 5_4:+47660320 | Msa0854830:CDS |
| ATGCAGAATTGTGAGGGCTC+TGG | 0.481153 | 5_4:-47667910 | None:intergenic |
| TAAGAAGAGTTAAGCGTGGA+AGG | 0.481453 | 5_4:-47660026 | None:intergenic |
| GTTGCAGCTGGATACGGTCT+CGG | 0.485915 | 5_4:+47660266 | Msa0854830:CDS |
| AGATGCTGCTGGTGTACATA+TGG | 0.488428 | 5_4:+47661098 | Msa0854830:CDS |
| AGTAATATCTAATCTATCTC+TGG | 0.490904 | 5_4:-47667819 | None:intergenic |
| CTTGATGACCCAGATGCTGC+TGG | 0.492675 | 5_4:+47661087 | Msa0854830:CDS |
| GTTGCAAGTCTCGCCGGCAG+AGG | 0.493948 | 5_4:-47660218 | None:intergenic |
| TATTTCTAAATCAGCTTGGT+GGG | 0.495687 | 5_4:+47666987 | Msa0854830:CDS |
| AAACACGCTTCCAAGGTAGA+AGG | 0.497402 | 5_4:-47661481 | None:intergenic |
| TTATTGATGTTGAGATCTGA+TGG | 0.497653 | 5_4:-47667409 | None:intergenic |
| TTTCTTTGCCAGTCATTCCC+AGG | 0.499298 | 5_4:-47667012 | None:intergenic |
| TAAAGATGATCTTCCAGAAA+GGG | 0.505177 | 5_4:+47666856 | Msa0854830:CDS |
| TCGAGACCGACAAGTTCCTT+CGG | 0.510148 | 5_4:-47660176 | None:intergenic |
| TCTGCCAACGGATTTCAGCT+TGG | 0.510892 | 5_4:-47661864 | None:intergenic |
| AGGCGGATGTTGAGCAGCGT+CGG | 0.511635 | 5_4:+47661283 | Msa0854830:CDS |
| TGCTCTGTCTAGTGGGCGAA+TGG | 0.512745 | 5_4:+47663607 | Msa0854830:CDS |
| GTTTCAGATGCTCTGTCTAG+TGG | 0.513317 | 5_4:+47663599 | Msa0854830:CDS |
| GGCGGATGTTGAGCAGCGTC+GGG | 0.514275 | 5_4:+47661284 | Msa0854830:CDS |
| GAAGAGTAAAGTGTTGAAGT+TGG | 0.515361 | 5_4:-47659972 | None:intergenic |
| ACCTTCACAGACACTTTCAT+GGG | 0.515867 | 5_4:+47667670 | Msa0854830:CDS |
| CACAAGCCAGCAAGTTGTTG+AGG | 0.517371 | 5_4:-47667637 | None:intergenic |
| AAGGTTTATCGGAAACGACT+TGG | 0.518215 | 5_4:+47664435 | Msa0854830:CDS |
| GGCCTCTCAATATGCCTCTA+CGG | 0.518340 | 5_4:-47667889 | None:intergenic |
| TGGAGTGAGCCAGGTTGTTG+AGG | 0.520474 | 5_4:+47663302 | Msa0854830:CDS |
| TCTCGTCTGCAGTATCTGTT+GGG | 0.521111 | 5_4:+47667761 | Msa0854830:CDS |
| AATCAGCTTGGTGGGATCCT+GGG | 0.523507 | 5_4:+47666995 | Msa0854830:CDS |
| TGCGGTTGTGATGGAGAAGG+AGG | 0.528299 | 5_4:-47660146 | None:intergenic |
| ACTCCACTGCAGCTGCACTT+CGG | 0.529765 | 5_4:+47667792 | Msa0854830:CDS |
| TTCCCGAAGTGCAGCTGCAG+TGG | 0.530717 | 5_4:-47667795 | None:intergenic |
| TGCTACTGCACCGCAAGTTG+CGG | 0.530831 | 5_4:+47660376 | Msa0854830:CDS |
| CGTCGTCGTTGAGTGCGTAA+AGG | 0.530836 | 5_4:-47660080 | None:intergenic |
| GGTTGTGATGGAGAAGGAGG+GGG | 0.531353 | 5_4:-47660143 | None:intergenic |
| ATAGAAAAGATGGGAAAGCT+TGG | 0.531435 | 5_4:+47666815 | Msa0854830:CDS |
| TGAAGTTCACTGGCCTTCTG+TGG | 0.531691 | 5_4:-47664543 | None:intergenic |
| CCTTTAAGCTCCTCCCCACC+AGG | 0.533236 | 5_4:-47661021 | None:intergenic |
| TCAACAACCTGGCTCACTCC+AGG | 0.534836 | 5_4:-47663300 | None:intergenic |
| TGTGATTCCACCTGGTGGGG+AGG | 0.535122 | 5_4:+47661011 | Msa0854830:CDS |
| TTAAAGATGATCTTCCAGAA+AGG | 0.535172 | 5_4:+47666855 | Msa0854830:CDS |
| CTGGACCAACACCACGGGCA+AGG | 0.536065 | 5_4:-47663392 | None:intergenic |
| ATGATCTTCCAGAAAGGGAC+AGG | 0.536382 | 5_4:+47666861 | Msa0854830:CDS |
| TGCTATGTCTATTGCAAGCA+AGG | 0.536666 | 5_4:+47666445 | Msa0854830:CDS |
| TCAAGGATGCAATTGGTGCA+GGG | 0.538444 | 5_4:+47666348 | Msa0854830:CDS |
| ACAAGCCAGCAAGTTGTTGA+GGG | 0.538886 | 5_4:-47667636 | None:intergenic |
| TTTGTAATCTGAGCACCAAA+CGG | 0.540410 | 5_4:-47666941 | None:intergenic |
| GTATTTCTAAATCAGCTTGG+TGG | 0.543582 | 5_4:+47666986 | Msa0854830:CDS |
| CTTACCAAGCTGCTCCACCC+TGG | 0.543662 | 5_4:-47667119 | None:intergenic |
| GCCGGCAACGATGACGGCGG+AGG | 0.543864 | 5_4:-47660240 | None:intergenic |
| AACCGCGCCGGCAACGATGA+CGG | 0.545048 | 5_4:-47660246 | None:intergenic |
| CGCCGTCATCGTTGCCGGCG+CGG | 0.548778 | 5_4:+47660244 | Msa0854830:CDS |
| AGTTCCTTCGGCGGTCGTTG+CGG | 0.550065 | 5_4:-47660164 | None:intergenic |
| TTGCAAGTCTCGCCGGCAGA+GGG | 0.550489 | 5_4:-47660217 | None:intergenic |
| ATCAATAAAGAGAAAGCAAG+AGG | 0.550837 | 5_4:+47667424 | Msa0854830:CDS |
| GTTGATAGCTTTCAACACCT+TGG | 0.551606 | 5_4:+47666640 | Msa0854830:CDS |
| GCATGTAAGGAAATTGGTTG+AGG | 0.551866 | 5_4:+47662497 | Msa0854830:CDS |
| AGCATAAGCAGCAGCACCAC+CGG | 0.552378 | 5_4:-47660348 | None:intergenic |
| GCTGCTGTTGGTGTTGCCGG+TGG | 0.555431 | 5_4:+47660332 | Msa0854830:CDS |
| TTTCAAGGTCACTGAATCCC+AGG | 0.556554 | 5_4:+47661502 | Msa0854830:CDS |
| TTTATGTCGTCTTTCTGATG+AGG | 0.558994 | 5_4:+47662320 | Msa0854830:CDS |
| TATACCTGCATGAAGTTCAC+TGG | 0.559740 | 5_4:-47664553 | None:intergenic |
| CATGCTGTCTAAATCAACAT+TGG | 0.560444 | 5_4:-47667284 | None:intergenic |
| GGAAGTAGAAATGCTGCGAT+TGG | 0.561774 | 5_4:+47660302 | Msa0854830:CDS |
| TATGTATTTCTAAATCAGCT+TGG | 0.562599 | 5_4:+47666983 | Msa0854830:CDS |
| CAACTCGCTCATTCAGGCCG+TGG | 0.564393 | 5_4:+47667480 | Msa0854830:CDS |
| AAGGCCAGGGTGGAGCAGCT+TGG | 0.564575 | 5_4:+47667115 | Msa0854830:CDS |
| GCAGAGGGAGTTTATCGACT+AGG | 0.567578 | 5_4:-47660202 | None:intergenic |
| TGAAGTTGGGGACCGTGAGG+CGG | 0.567731 | 5_4:+47661266 | Msa0854830:CDS |
| ACAACCGCAACGACCGCCGA+AGG | 0.568911 | 5_4:+47660160 | Msa0854830:CDS |
| TTCAGCAATGTGTTGCTGAT+GGG | 0.569404 | 5_4:+47665308 | Msa0854830:CDS |
| AAGCTGAAATCCGTTGGCAG+AGG | 0.569924 | 5_4:+47661866 | Msa0854830:CDS |
| CAATGTTGATTTAGACAGCA+TGG | 0.572042 | 5_4:+47667285 | Msa0854830:CDS |
| GCGGAGGTTGCAAGTCTCGC+CGG | 0.573637 | 5_4:-47660224 | None:intergenic |
| AAAGAACTTATAGAAAAGAT+GGG | 0.574005 | 5_4:+47666806 | Msa0854830:CDS |
| GCGGTTGTGATGGAGAAGGA+GGG | 0.575624 | 5_4:-47660145 | None:intergenic |
| CTTCAGCAATGTGTTGCTGA+TGG | 0.577125 | 5_4:+47665307 | Msa0854830:CDS |
| CGACCGCCGAAGGAACTTGT+CGG | 0.577369 | 5_4:+47660170 | Msa0854830:CDS |
| TTTACTTGATGTTACAACAA+AGG | 0.577769 | 5_4:+47664416 | Msa0854830:CDS |
| TACTGCACCGCAAGTTGCGG+CGG | 0.578832 | 5_4:+47660379 | Msa0854830:CDS |
| GTATGACGTTGACAGAAAGA+TGG | 0.581764 | 5_4:+47663547 | Msa0854830:CDS |
| GGCCTTCGTCAACTGTCCAT+CGG | 0.583424 | 5_4:-47667098 | None:intergenic |
| TTTCAGATGCTCTGTCTAGT+GGG | 0.584078 | 5_4:+47663600 | Msa0854830:CDS |
| TGGACAGTTGACGAAGGCCA+GGG | 0.585664 | 5_4:+47667102 | Msa0854830:CDS |
| ATTGAAACAGCTGTAACTCA+AGG | 0.586467 | 5_4:+47667223 | Msa0854830:CDS |
| GACATAGATCGCCTTGCCCG+TGG | 0.586918 | 5_4:+47663381 | Msa0854830:CDS |
| TCAGCAATGTGTTGCTGATG+GGG | 0.591795 | 5_4:+47665309 | Msa0854830:CDS |
| TCTCTGTCTTAGTAGTGCCA+CGG | 0.592058 | 5_4:-47667497 | None:intergenic |
| GATGTGACTAGGATTCCGTT+TGG | 0.592667 | 5_4:+47666926 | Msa0854830:CDS |
| AAATTAACCGCCGCAACTTG+CGG | 0.593368 | 5_4:-47660386 | None:intergenic |
| TATGTACACCAGCAGCATCT+GGG | 0.593520 | 5_4:-47661095 | None:intergenic |
| GTGAGGGTAGTAAAATGGAG+GGG | 0.593697 | 5_4:-47660055 | None:intergenic |
| TAGATTAGATATTACTGCAG+AGG | 0.594847 | 5_4:+47667826 | Msa0854830:CDS |
| GGCCGTAGAGGCATATTGAG+AGG | 0.596328 | 5_4:+47667887 | Msa0854830:three_prime_UTR |
| AGCTTTCAGGCAACAAGCTG+AGG | 0.597008 | 5_4:+47667066 | Msa0854830:CDS |
| ACAGAGAAATCACAAGGGAG+TGG | 0.598045 | 5_4:+47667513 | Msa0854830:CDS |
| GTATCCAGCTGCAACCGCGC+CGG | 0.599354 | 5_4:-47660258 | None:intergenic |
| GCTGCTCAACATCCGCCTCA+CGG | 0.600168 | 5_4:-47661278 | None:intergenic |
| CTTGGTTGTAAATGAGTTGG+TGG | 0.600424 | 5_4:+47666658 | Msa0854830:CDS |
| GGTGAGGGTAGTAAAATGGA+GGG | 0.600906 | 5_4:-47660056 | None:intergenic |
| AGAAACTGGACCAACACCAC+GGG | 0.601009 | 5_4:-47663397 | None:intergenic |
| GCTTCCAAGCTGAAATCCGT+TGG | 0.603049 | 5_4:+47661860 | Msa0854830:CDS |
| AATAGACATAGCAGTCTCCC+TGG | 0.604418 | 5_4:-47666435 | None:intergenic |
| AGTAGAAATGCTGCGATTGG+TGG | 0.604979 | 5_4:+47660305 | Msa0854830:CDS |
| CACCTTGGTTGTAAATGAGT+TGG | 0.605022 | 5_4:+47666655 | Msa0854830:CDS |
| TGTCAAGCTCCTCAACAACC+TGG | 0.607294 | 5_4:-47663311 | None:intergenic |
| CAAACAATCACCTCTGCCAA+CGG | 0.607596 | 5_4:-47661876 | None:intergenic |
| AGTCGATAAACTCCCTCTGC+CGG | 0.609152 | 5_4:+47660205 | Msa0854830:CDS |
| ACTTTCATGGGAAGTGTCAG+AGG | 0.610928 | 5_4:+47667682 | Msa0854830:CDS |
| AAGGCCAGTGAACTTCATGC+AGG | 0.612338 | 5_4:+47664549 | Msa0854830:CDS |
| GTCTAACTGGTGATGTGACT+AGG | 0.614021 | 5_4:+47666915 | Msa0854830:CDS |
| ACCTTGAAAACACGCTTCCA+AGG | 0.615440 | 5_4:-47661488 | None:intergenic |
| TTATTCTTTATAGATTGTCA+AGG | 0.616284 | 5_4:+47666331 | Msa0854830:intron |
| GGTTGTTGAGGAGCTTGACA+AGG | 0.616569 | 5_4:+47663314 | Msa0854830:CDS |
| AATGAAATGTTTGGCCGTAG+AGG | 0.617169 | 5_4:+47667875 | Msa0854830:three_prime_UTR |
| CGGTTGTGATGGAGAAGGAG+GGG | 0.617708 | 5_4:-47660144 | None:intergenic |
| TATTGATGTTGAGATCTGAT+GGG | 0.617741 | 5_4:-47667408 | None:intergenic |
| ACCATCACTCCCAGATTGGT+AGG | 0.619109 | 5_4:+47661223 | Msa0854830:intron |
| CGTTGCGGTTGTGATGGAGA+AGG | 0.621487 | 5_4:-47660149 | None:intergenic |
| GGTTGAGGAAAATATTTCGG+TGG | 0.622652 | 5_4:+47662512 | Msa0854830:CDS |
| CACGGCCTGAATGAGCGAGT+TGG | 0.627450 | 5_4:-47667479 | None:intergenic |
| TGTGTAAGAAGAGTTAAGCG+TGG | 0.627780 | 5_4:-47660030 | None:intergenic |
| TTGAAACAGCTGTAACTCAA+GGG | 0.628422 | 5_4:+47667224 | Msa0854830:CDS |
| CAAGGATGCAATTGGTGCAG+GGG | 0.632500 | 5_4:+47666349 | Msa0854830:CDS |
| CTTGGACAGACTGTTTCAAG+TGG | 0.638180 | 5_4:+47664453 | Msa0854830:CDS |
| CACCAACTCATTTACAACCA+AGG | 0.641046 | 5_4:-47666657 | None:intergenic |
| GCAGCTTGGTAAGCTGCAGA+CGG | 0.643843 | 5_4:+47667129 | Msa0854830:CDS |
| TCCCATGAAAGTGTCTGTGA+AGG | 0.648189 | 5_4:-47667671 | None:intergenic |
| CGCGCCGGCAACGATGACGG+CGG | 0.650520 | 5_4:-47660243 | None:intergenic |
| CGTCGTTGAGTGCGTAAAGG+GGG | 0.651266 | 5_4:-47660077 | None:intergenic |
| TCGTCGTTGAGTGCGTAAAG+GGG | 0.652633 | 5_4:-47660078 | None:intergenic |
| TGGGCGAATGGAAGATAACA+AGG | 0.652972 | 5_4:+47663619 | Msa0854830:CDS |
| AAGAAGAGTTAAGCGTGGAA+GGG | 0.654083 | 5_4:-47660025 | None:intergenic |
| ACATGGCTTGCGACTTACCA+GGG | 0.655997 | 5_4:+47666418 | Msa0854830:CDS |
| TTAAGCTCCTCCCCACCAGG+TGG | 0.656741 | 5_4:-47661018 | None:intergenic |
| AAGAAACTGGACCAACACCA+CGG | 0.657219 | 5_4:-47663398 | None:intergenic |
| AGCCGATGGACAGTTGACGA+AGG | 0.657964 | 5_4:+47667096 | Msa0854830:CDS |
| GCTGCTTCAACAGTTTGTTG+AGG | 0.660211 | 5_4:-47665388 | None:intergenic |
| AGACCGACAAGTTCCTTCGG+CGG | 0.660554 | 5_4:-47660173 | None:intergenic |
| TCAGTAAGAAAAGCAGCACA+TGG | 0.663049 | 5_4:+47666401 | Msa0854830:CDS |
| ACTAAGACAGAGAAATCACA+AGG | 0.663500 | 5_4:+47667507 | Msa0854830:CDS |
| AGGTACTGGTGAGTTTGATG+AGG | 0.664047 | 5_4:+47667366 | Msa0854830:CDS |
| GAGTTGGTGGCAGACATCAA+AGG | 0.664140 | 5_4:+47666671 | Msa0854830:CDS |
| GAAATAATGGATGTTCATAG+GGG | 0.665094 | 5_4:+47667031 | Msa0854830:CDS |
| GCTTGAAGTTGGGGACCGTG+AGG | 0.681948 | 5_4:+47661263 | Msa0854830:CDS |
| TAGCGTCGGAGGAACATCGA+GGG | 0.683921 | 5_4:-47660118 | None:intergenic |
| TGTGTCAAATATTGTATTTG+GGG | 0.685103 | 5_4:+47661445 | Msa0854830:CDS |
| AAACAGCTGTAACTCAAGGG+AGG | 0.687824 | 5_4:+47667227 | Msa0854830:CDS |
| GCAGCTCATGCAGATATCTG+TGG | 0.690840 | 5_4:+47665406 | Msa0854830:CDS |
| GGTCTCGGTTCAAGATTCGG+AGG | 0.693448 | 5_4:+47660281 | Msa0854830:CDS |
| GGAGGAGCTTAAAGGCGATG+AGG | 0.699952 | 5_4:+47661029 | Msa0854830:CDS |
| TGCTGCTGGTGTACATATGG+AGG | 0.702321 | 5_4:+47661101 | Msa0854830:CDS |
| TGATGGGGAGCTCAATGATG+AGG | 0.702888 | 5_4:+47665324 | Msa0854830:CDS |
| AGGGGTTGATGGATATGATG+AGG | 0.706998 | 5_4:+47666367 | Msa0854830:CDS |
| ACAGTTGACGAAGGCCAGGG+TGG | 0.710614 | 5_4:+47667105 | Msa0854830:CDS |
| TTAGCGTCGGAGGAACATCG+AGG | 0.743791 | 5_4:-47660119 | None:intergenic |
| TATGTCTATTGCAAGCAAGG+CGG | 0.755283 | 5_4:+47666448 | Msa0854830:CDS |
| CTAAGACAGAGAAATCACAA+GGG | 0.779464 | 5_4:+47667508 | Msa0854830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTAATTGATTTTGAAT+TGG | + | chr5_4:47660560-47660579 | Msa0854830:intron | 10.0% |
| !! | CAATATTTATTTATTTAACA+TGG | - | chr5_4:47662683-47662702 | None:intergenic | 10.0% |
| !! | AATAAAAAAAATATGAACTT+AGG | - | chr5_4:47663140-47663159 | None:intergenic | 10.0% |
| !!! | AAGTTCATATTTTTTTTATT+TGG | + | chr5_4:47663140-47663159 | Msa0854830:intron | 10.0% |
| !! | TCAACATTTAAAAAAATATT+GGG | - | chr5_4:47663704-47663723 | None:intergenic | 10.0% |
| !! | TTCAACATTTAAAAAAATAT+TGG | - | chr5_4:47663705-47663724 | None:intergenic | 10.0% |
| !! | AATCAGTTAAAAAATATATT+TGG | + | chr5_4:47664366-47664385 | Msa0854830:CDS | 10.0% |
| !! | ATCAGTTAAAAAATATATTT+GGG | + | chr5_4:47664367-47664386 | Msa0854830:CDS | 10.0% |
| !!! | TAATTCTAAATAATTTTCTT+GGG | - | chr5_4:47664840-47664859 | None:intergenic | 10.0% |
| !!! | TTAATTCTAAATAATTTTCT+TGG | - | chr5_4:47664841-47664860 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTATGTTAGAAAA+AGG | + | chr5_4:47660537-47660556 | Msa0854830:intron | 15.0% |
| !! | TTATAAAAATGGTAAATACT+TGG | + | chr5_4:47661371-47661390 | Msa0854830:intron | 15.0% |
| !! | TTACAAAAAATTTAAGAGTT+TGG | + | chr5_4:47662114-47662133 | Msa0854830:intron | 15.0% |
| !!! | GTTTGTTTTTATTTACTTTA+TGG | + | chr5_4:47663450-47663469 | Msa0854830:intron | 15.0% |
| !!! | ATTAAATTTATTTTTGGTGT+AGG | + | chr5_4:47663518-47663537 | Msa0854830:intron | 15.0% |
| !! | TAAATATTCATAGAAAATGT+TGG | - | chr5_4:47663937-47663956 | None:intergenic | 15.0% |
| !! | AATTGAATGTATTTATAGTA+AGG | + | chr5_4:47664101-47664120 | Msa0854830:intron | 15.0% |
| !!! | TTTGAATTTTATCTTTTGTA+AGG | + | chr5_4:47664597-47664616 | Msa0854830:intron | 15.0% |
| !! | ATAAAAGGAAATATGAAATT+TGG | - | chr5_4:47665498-47665517 | None:intergenic | 15.0% |
| !!! | TATAATTTGTCATGAATTTA+TGG | + | chr5_4:47666002-47666021 | Msa0854830:intron | 15.0% |
| !! | TTATATATGATGATTCAAAT+AGG | + | chr5_4:47666498-47666517 | Msa0854830:intron | 15.0% |
| !!! | TTGATTTGTGAATTTTTTTC+AGG | + | chr5_4:47660583-47660602 | Msa0854830:intron | 20.0% |
| !!! | TCTGCAATTATGTTATTTTT+TGG | + | chr5_4:47660714-47660733 | Msa0854830:intron | 20.0% |
| !! | CAAGAACTTAATCTAAATAA+AGG | - | chr5_4:47660758-47660777 | None:intergenic | 20.0% |
| !!! | CTTTATTTAGATTAAGTTCT+TGG | + | chr5_4:47660756-47660775 | Msa0854830:intron | 20.0% |
| !! | TATGTGTCAAATATTGTATT+TGG | + | chr5_4:47661443-47661462 | Msa0854830:CDS | 20.0% |
| !! | ATGTGTCAAATATTGTATTT+GGG | + | chr5_4:47661444-47661463 | Msa0854830:CDS | 20.0% |
| !! | ATAGTAGAATAATTGTGTTT+AGG | + | chr5_4:47661603-47661622 | Msa0854830:intron | 20.0% |
| !! | ATGTTTATTACTATTAACAG+CGG | + | chr5_4:47661678-47661697 | Msa0854830:intron | 20.0% |
| !!! | TTTATAATTTTCTACTTCTC+TGG | + | chr5_4:47662364-47662383 | Msa0854830:intron | 20.0% |
| !!! | TTATAATTTTCTACTTCTCT+GGG | + | chr5_4:47662365-47662384 | Msa0854830:intron | 20.0% |
| !! | TTATTTAACAACAAGAGAAA+GGG | - | chr5_4:47662396-47662415 | None:intergenic | 20.0% |
| !! | ATTATTTAACAACAAGAGAA+AGG | - | chr5_4:47662397-47662416 | None:intergenic | 20.0% |
| !!! | TCTTGTTGTTAAATAATTCT+TGG | + | chr5_4:47662400-47662419 | Msa0854830:intron | 20.0% |
| !!! | CTTGTTGTTAAATAATTCTT+GGG | + | chr5_4:47662401-47662420 | Msa0854830:intron | 20.0% |
| !! | ATACAGAAAATGTTAAAGAA+AGG | - | chr5_4:47662969-47662988 | None:intergenic | 20.0% |
| !! | TTCTTTATAGTGAAAAAGAT+AGG | + | chr5_4:47663998-47664017 | Msa0854830:intron | 20.0% |
| !! | TCTTTATAGTGAAAAAGATA+GGG | + | chr5_4:47663999-47664018 | Msa0854830:intron | 20.0% |
| !!! | TTTTAGAGAATTTCAAAATC+AGG | - | chr5_4:47664183-47664202 | None:intergenic | 20.0% |
| !!! | TCATCAAATTTTCATGTTAT+TGG | - | chr5_4:47664231-47664250 | None:intergenic | 20.0% |
| !! | TTAAAAAATATATTTGGGCT+GGG | + | chr5_4:47664372-47664391 | Msa0854830:CDS | 20.0% |
| !! | CATAATCTCCTTAATTTAAT+GGG | - | chr5_4:47665030-47665049 | None:intergenic | 20.0% |
| !! | TCATAATCTCCTTAATTTAA+TGG | - | chr5_4:47665031-47665050 | None:intergenic | 20.0% |
| !! | AAACTAATCAAGGTTAATTA+TGG | + | chr5_4:47665050-47665069 | Msa0854830:intron | 20.0% |
| !! | AAGGTTAATTATGGAATAAT+GGG | + | chr5_4:47665059-47665078 | Msa0854830:intron | 20.0% |
| !! | ATGTATAATTCTTAATCGTA+AGG | + | chr5_4:47665119-47665138 | Msa0854830:intron | 20.0% |
| !!! | AAATTGTATTTCTGCATAAA+AGG | - | chr5_4:47665513-47665532 | None:intergenic | 20.0% |
| !!! | TCTACTTTCTATTTTGATAT+TGG | + | chr5_4:47665867-47665886 | Msa0854830:intron | 20.0% |
| !!! | CTATTTTGATATTGGTAATT+TGG | + | chr5_4:47665875-47665894 | Msa0854830:intron | 20.0% |
| !! | TAGGTTAAAAATAAAAATGG+CGG | - | chr5_4:47665952-47665971 | None:intergenic | 20.0% |
| !! | TCCTAGGTTAAAAATAAAAA+TGG | - | chr5_4:47665955-47665974 | None:intergenic | 20.0% |
| !! | TTATTCTTTATAGATTGTCA+AGG | + | chr5_4:47666331-47666350 | Msa0854830:intron | 20.0% |
| !! | AAAGAACTTATAGAAAAGAT+GGG | + | chr5_4:47666806-47666825 | Msa0854830:CDS | 20.0% |
| !!! | ATCATCTTTAAGAGTAATTT+CGG | - | chr5_4:47666846-47666865 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTAGATTTGTGAA+AGG | + | chr5_4:47667574-47667593 | Msa0854830:intron | 20.0% |
| !!! | TTTCTTTCCATTTTGTTTAA+CGG | + | chr5_4:47667939-47667958 | Msa0854830:three_prime_UTR | 20.0% |
| !!! | TTGTGAATTTTTTTCAGGTA+TGG | + | chr5_4:47660588-47660607 | Msa0854830:intron | 25.0% |
| ! | TCTAAATAAAGGAACTTTCA+TGG | - | chr5_4:47660747-47660766 | None:intergenic | 25.0% |
| !!! | CAACCATTTTTGAATTTGTA+GGG | + | chr5_4:47660852-47660871 | Msa0854830:intron | 25.0% |
| ! | GACTAAACTTAATTTAGCAT+AGG | + | chr5_4:47660903-47660922 | Msa0854830:intron | 25.0% |
| ! | TTAATTTAGCATAGGTGATA+AGG | + | chr5_4:47660911-47660930 | Msa0854830:intron | 25.0% |
| ! | ATTTGTATTTGAACTTGTCT+AGG | + | chr5_4:47660977-47660996 | Msa0854830:intron | 25.0% |
| !! | AAGACCTAAAGAATTTTTGA+AGG | - | chr5_4:47661070-47661089 | None:intergenic | 25.0% |
| ! | TTGCATATAATGCAAATTTG+AGG | + | chr5_4:47661139-47661158 | Msa0854830:intron | 25.0% |
| ! | TGCATATAATGCAAATTTGA+GGG | + | chr5_4:47661140-47661159 | Msa0854830:intron | 25.0% |
| !!! | ATTTGAGGGTATTTATTTTG+AGG | + | chr5_4:47661154-47661173 | Msa0854830:intron | 25.0% |
| !!! | CAAATATGGCAATTACTTTT+GGG | + | chr5_4:47661346-47661365 | Msa0854830:intron | 25.0% |
| !!! | ACTTTTGGGCTTTATAAAAA+TGG | + | chr5_4:47661360-47661379 | Msa0854830:intron | 25.0% |
| !! | TTGACACATATATCAACTTT+TGG | - | chr5_4:47661433-47661452 | None:intergenic | 25.0% |
| ! | TGTGTCAAATATTGTATTTG+GGG | + | chr5_4:47661445-47661464 | Msa0854830:CDS | 25.0% |
| ! | TATTTGTGATATGCAAGTTT+AGG | + | chr5_4:47661577-47661596 | Msa0854830:intron | 25.0% |
| ! | AAAATCAATTCTTCCATTTC+AGG | - | chr5_4:47661637-47661656 | None:intergenic | 25.0% |
| ! | GCTGTTAATAGTAATAAACA+TGG | - | chr5_4:47661679-47661698 | None:intergenic | 25.0% |
| ! | TTGACAATATTCCATTTAAC+AGG | + | chr5_4:47661799-47661818 | Msa0854830:intron | 25.0% |
| ! | ATTGTTTGATCAGTAATACT+TGG | + | chr5_4:47661891-47661910 | Msa0854830:intron | 25.0% |
| !!! | GCAAATTTTAGCTGTTAATA+AGG | + | chr5_4:47662217-47662236 | Msa0854830:intron | 25.0% |
| ! | GAAACTATTCATTAGACTTA+AGG | - | chr5_4:47662250-47662269 | None:intergenic | 25.0% |
| !! | TATAATTTTCTACTTCTCTG+GGG | + | chr5_4:47662366-47662385 | Msa0854830:intron | 25.0% |
| ! | ATTGGTTGAGGAAAATATTT+CGG | + | chr5_4:47662509-47662528 | Msa0854830:CDS | 25.0% |
| ! | GAATATTTGAAGAAAAACTG+AGG | - | chr5_4:47662577-47662596 | None:intergenic | 25.0% |
| !!! | TTCTTTACTTTTAAGTGATC+AGG | + | chr5_4:47662594-47662613 | Msa0854830:intron | 25.0% |
| ! | TTGTATGTATATACACACAT+GGG | - | chr5_4:47662799-47662818 | None:intergenic | 25.0% |
| ! | TTTGTATGTATATACACACA+TGG | - | chr5_4:47662800-47662819 | None:intergenic | 25.0% |
| ! | TAGATAATCTTGATCATACA+TGG | - | chr5_4:47662847-47662866 | None:intergenic | 25.0% |
| ! | CAAAACCATTCATTTACAAT+GGG | - | chr5_4:47662942-47662961 | None:intergenic | 25.0% |
| !!! | ACAACAATGCAAGTTTTATT+AGG | + | chr5_4:47663034-47663053 | Msa0854830:intron | 25.0% |
| !! | TTACTTAACTTTTGCAAATG+TGG | + | chr5_4:47663243-47663262 | Msa0854830:intron | 25.0% |
| ! | AAAACATAGTTGATTAGCAA+AGG | - | chr5_4:47663275-47663294 | None:intergenic | 25.0% |
| ! | CATCTCATTTAAGAATCATT+CGG | + | chr5_4:47663359-47663378 | Msa0854830:CDS | 25.0% |
| !!! | AAATTTATTTTTGGTGTAGG+AGG | + | chr5_4:47663521-47663540 | Msa0854830:intron | 25.0% |
| !! | AAGATTTGAAACTCCTTTAT+AGG | + | chr5_4:47663570-47663589 | Msa0854830:CDS | 25.0% |
| !! | AGATTTGAAACTCCTTTATA+GGG | + | chr5_4:47663571-47663590 | Msa0854830:CDS | 25.0% |
| !!! | ACTTTTTGAAAATCTGGATT+TGG | + | chr5_4:47663824-47663843 | Msa0854830:intron | 25.0% |
| !!! | CTTTTTGAAAATCTGGATTT+GGG | + | chr5_4:47663825-47663844 | Msa0854830:intron | 25.0% |
| ! | AATGTTGGATATTGTTTAGA+CGG | - | chr5_4:47663922-47663941 | None:intergenic | 25.0% |
| ! | TATAAAGAATCACAATTCCT+AGG | - | chr5_4:47663987-47664006 | None:intergenic | 25.0% |
| ! | CTTTATAGTGAAAAAGATAG+GGG | + | chr5_4:47664000-47664019 | Msa0854830:intron | 25.0% |
| !! | TTTTTACCACAACATTAACA+GGG | - | chr5_4:47664036-47664055 | None:intergenic | 25.0% |
| !! | ATTTTTACCACAACATTAAC+AGG | - | chr5_4:47664037-47664056 | None:intergenic | 25.0% |
| ! | GTTAAAAAATATATTTGGGC+TGG | + | chr5_4:47664371-47664390 | Msa0854830:CDS | 25.0% |
| ! | TTTACTTGATGTTACAACAA+AGG | + | chr5_4:47664416-47664435 | Msa0854830:CDS | 25.0% |
| ! | ATGTTACAACAAAGGTTTAT+CGG | + | chr5_4:47664424-47664443 | Msa0854830:CDS | 25.0% |
| !! | ATTTTATCTTTTGTAAGGTC+TGG | + | chr5_4:47664602-47664621 | Msa0854830:intron | 25.0% |
| ! | CAATTAAGCCCATTAAATTA+AGG | + | chr5_4:47665019-47665038 | Msa0854830:intron | 25.0% |
| ! | CAAGGTTAATTATGGAATAA+TGG | + | chr5_4:47665058-47665077 | Msa0854830:intron | 25.0% |
| ! | AGGTTAATTATGGAATAATG+GGG | + | chr5_4:47665060-47665079 | Msa0854830:intron | 25.0% |
| !! | CAATTGTGTATCTGTATTTT+TGG | + | chr5_4:47665166-47665185 | Msa0854830:intron | 25.0% |
| ! | AATGAATGACAAATTCGTTA+CGG | - | chr5_4:47665468-47665487 | None:intergenic | 25.0% |
| ! | GAGATTATGACTATTATTTG+TGG | + | chr5_4:47665554-47665573 | Msa0854830:intron | 25.0% |
| !!! | TCCTTATAGTTAGCTTTTAA+GGG | + | chr5_4:47665696-47665715 | Msa0854830:intron | 25.0% |
| ! | TGATAATTATCTAAGCACTA+GGG | - | chr5_4:47665728-47665747 | None:intergenic | 25.0% |
| ! | AGAAACCAAGACATAATAAA+AGG | - | chr5_4:47665817-47665836 | None:intergenic | 25.0% |
| !! | AAATAGAAAGTAGAAGTGTA+TGG | - | chr5_4:47665861-47665880 | None:intergenic | 25.0% |
| !!! | GCCATTTTTATTTTTAACCT+AGG | + | chr5_4:47665951-47665970 | Msa0854830:intron | 25.0% |
| ! | AATTAAAAAGTAGGTATCCT+AGG | - | chr5_4:47665971-47665990 | None:intergenic | 25.0% |
| ! | TGATAATCTAACTAATGAAC+AGG | - | chr5_4:47666164-47666183 | None:intergenic | 25.0% |
| ! | AGAGGAAATTATTGAAATTG+AGG | + | chr5_4:47666730-47666749 | Msa0854830:CDS | 25.0% |
| !! | TTTTCTATAAGTTCTTTGTC+AGG | - | chr5_4:47666803-47666822 | None:intergenic | 25.0% |
| ! | CAAAGAACTTATAGAAAAGA+TGG | + | chr5_4:47666805-47666824 | Msa0854830:CDS | 25.0% |
| !! | TATGTATTTCTAAATCAGCT+TGG | + | chr5_4:47666983-47667002 | Msa0854830:CDS | 25.0% |
| !!! | AAGAAATAATGGATGTTCAT+AGG | + | chr5_4:47667029-47667048 | Msa0854830:CDS | 25.0% |
| !!! | AGAAATAATGGATGTTCATA+GGG | + | chr5_4:47667030-47667049 | Msa0854830:CDS | 25.0% |
| ! | GAATATAACCACTACAAAAA+TGG | + | chr5_4:47667192-47667211 | Msa0854830:CDS | 25.0% |
| ! | AGTAATATCTAATCTATCTC+TGG | - | chr5_4:47667822-47667841 | None:intergenic | 25.0% |
| ! | TAGTCATGTAATGAAATGTT+TGG | + | chr5_4:47667866-47667885 | Msa0854830:exon | 25.0% |
| ! | ATATTCACCGTTAAACAAAA+TGG | - | chr5_4:47667949-47667968 | None:intergenic | 25.0% |
| ACGAAAATGAAGAAGATAGA+AGG | - | chr5_4:47659937-47659956 | None:intergenic | 30.0% | |
| !! | TGTTGAAGTTGGTGTTTATA+GGG | - | chr5_4:47659964-47659983 | None:intergenic | 30.0% |
| !! | GCAACCATTTTTGAATTTGT+AGG | + | chr5_4:47660851-47660870 | Msa0854830:intron | 30.0% |
| ! | CATTTTTGAATTTGTAGGGT+CGG | + | chr5_4:47660856-47660875 | Msa0854830:intron | 30.0% |
| TCCAAAGAAAAAACTTTACC+TGG | + | chr5_4:47660881-47660900 | Msa0854830:intron | 30.0% | |
| !!! | TCCAGGTAAAGTTTTTTCTT+TGG | - | chr5_4:47660885-47660904 | None:intergenic | 30.0% |
| TGCTAAATTAAGTTTAGTCC+AGG | - | chr5_4:47660902-47660921 | None:intergenic | 30.0% | |
| GATAAGGAGTTATGATGATT+TGG | + | chr5_4:47660927-47660946 | Msa0854830:intron | 30.0% | |
| GTCACCTTCAAAAATTCTTT+AGG | + | chr5_4:47661063-47661082 | Msa0854830:CDS | 30.0% | |
| TTGCATTATTGAGCCAAATA+TGG | + | chr5_4:47661332-47661351 | Msa0854830:intron | 30.0% | |
| CCAAAAGTAATTGCCATATT+TGG | - | chr5_4:47661348-47661367 | None:intergenic | 30.0% | |
| ! | CCAAATATGGCAATTACTTT+TGG | + | chr5_4:47661345-47661364 | Msa0854830:intron | 30.0% |
| AAATACAATTCACATTCCAC+AGG | - | chr5_4:47661562-47661581 | None:intergenic | 30.0% | |
| ! | TTAGGTGTATTTTCCTGAAA+TGG | + | chr5_4:47661621-47661640 | Msa0854830:intron | 30.0% |
| ! | TCTTCCAATTAAGGCATTAA+CGG | - | chr5_4:47662006-47662025 | None:intergenic | 30.0% |
| ACTTTAGCATCAGATGAAAA+CGG | - | chr5_4:47662140-47662159 | None:intergenic | 30.0% | |
| ! | AGCTTTTCTAGATCAAAATC+TGG | - | chr5_4:47662276-47662295 | None:intergenic | 30.0% |
| !!! | AATTTTGACTTTGTAGCTTG+CGG | + | chr5_4:47662458-47662477 | Msa0854830:intron | 30.0% |
| CAAAGATGAACACTAACAAT+GGG | - | chr5_4:47662739-47662758 | None:intergenic | 30.0% | |
| TCAAAGATGAACACTAACAA+TGG | - | chr5_4:47662740-47662759 | None:intergenic | 30.0% | |
| TAATCTTGATCATACATGGA+TGG | - | chr5_4:47662843-47662862 | None:intergenic | 30.0% | |
| CCAAAACCATTCATTTACAA+TGG | - | chr5_4:47662943-47662962 | None:intergenic | 30.0% | |
| ! | CCATTGTAAATGAATGGTTT+TGG | + | chr5_4:47662940-47662959 | Msa0854830:intron | 30.0% |
| TAATGAACAGCTATGAAACA+TGG | - | chr5_4:47663226-47663245 | None:intergenic | 30.0% | |
| AATTTACCCACTAAAGAAAC+TGG | - | chr5_4:47663414-47663433 | None:intergenic | 30.0% | |
| !! | ATGCAGACTTTTTGAAAATC+TGG | + | chr5_4:47663818-47663837 | Msa0854830:intron | 30.0% |
| ! | AACACATTTTACACATTCCT+AGG | + | chr5_4:47663967-47663986 | Msa0854830:intron | 30.0% |
| GAATGTATTTATAGTAAGGC+TGG | + | chr5_4:47664105-47664124 | Msa0854830:intron | 30.0% | |
| AAAATCAGGTAATTTGAGAG+TGG | - | chr5_4:47664169-47664188 | None:intergenic | 30.0% | |
| GAAGAATAGACTGTTATTAG+CGG | + | chr5_4:47664795-47664814 | Msa0854830:intron | 30.0% | |
| AAGAATAGACTGTTATTAGC+GGG | + | chr5_4:47664796-47664815 | Msa0854830:intron | 30.0% | |
| TTTATAGATGAGCAGTTTGT+AGG | - | chr5_4:47664920-47664939 | None:intergenic | 30.0% | |
| AATAAATGTGCAGCAATTGT+CGG | - | chr5_4:47664976-47664995 | None:intergenic | 30.0% | |
| GGAGATTATGAAACTAATCA+AGG | + | chr5_4:47665040-47665059 | Msa0854830:intron | 30.0% | |
| ! | TTAATTATGGAATAATGGGG+TGG | + | chr5_4:47665063-47665082 | Msa0854830:intron | 30.0% |
| TTTCAACATGACATGTTGAT+AGG | + | chr5_4:47665593-47665612 | Msa0854830:intron | 30.0% | |
| TTCAACATGACATGTTGATA+GGG | + | chr5_4:47665594-47665613 | Msa0854830:intron | 30.0% | |
| CTTAAAAGCTAACTATAAGG+AGG | - | chr5_4:47665697-47665716 | None:intergenic | 30.0% | |
| !!! | CTCCTTATAGTTAGCTTTTA+AGG | + | chr5_4:47665695-47665714 | Msa0854830:intron | 30.0% |
| ACCCTTAAAAGCTAACTATA+AGG | - | chr5_4:47665700-47665719 | None:intergenic | 30.0% | |
| !!! | TTATAGTTAGCTTTTAAGGG+TGG | + | chr5_4:47665699-47665718 | Msa0854830:intron | 30.0% |
| GATAATTATCTAAGCACTAG+GGG | - | chr5_4:47665727-47665746 | None:intergenic | 30.0% | |
| GTGATAATTATCTAAGCACT+AGG | - | chr5_4:47665729-47665748 | None:intergenic | 30.0% | |
| ATCACATTTCACATGTATAG+CGG | + | chr5_4:47665744-47665763 | Msa0854830:intron | 30.0% | |
| ! | TGTCACCTTTTATTATGTCT+TGG | + | chr5_4:47665809-47665828 | Msa0854830:intron | 30.0% |
| AGCAGACACAATTAAAAAGT+AGG | - | chr5_4:47665980-47665999 | None:intergenic | 30.0% | |
| CTCAAAACTGAAACTAGATA+TGG | + | chr5_4:47666034-47666053 | Msa0854830:intron | 30.0% | |
| TAGTAAGTAGAAGTAGATAC+AGG | - | chr5_4:47666136-47666155 | None:intergenic | 30.0% | |
| ! | TTGTTGATTACGTTGATATG+TGG | + | chr5_4:47666219-47666238 | Msa0854830:intron | 30.0% |
| AAGTAAAAACTTCCAATGTC+TGG | - | chr5_4:47666296-47666315 | None:intergenic | 30.0% | |
| !! | TGGTTCTTCAGTTTTAACAT+CGG | - | chr5_4:47666705-47666724 | None:intergenic | 30.0% |
| TTGAGGAAATTGATGAAGAA+TGG | + | chr5_4:47666747-47666766 | Msa0854830:CDS | 30.0% | |
| TGAGGAAATTGATGAAGAAT+GGG | + | chr5_4:47666748-47666767 | Msa0854830:CDS | 30.0% | |
| TTAAAGATGATCTTCCAGAA+AGG | + | chr5_4:47666855-47666874 | Msa0854830:CDS | 30.0% | |
| TAAAGATGATCTTCCAGAAA+GGG | + | chr5_4:47666856-47666875 | Msa0854830:CDS | 30.0% | |
| ! | TATTTCTAAATCAGCTTGGT+GGG | + | chr5_4:47666987-47667006 | Msa0854830:CDS | 30.0% |
| AATGACTGGCAAAGAAATAA+TGG | + | chr5_4:47667018-47667037 | Msa0854830:CDS | 30.0% | |
| !! | GAAATAATGGATGTTCATAG+GGG | + | chr5_4:47667031-47667050 | Msa0854830:CDS | 30.0% |
| GCTCAATATGAAGCAAATTA+GGG | + | chr5_4:47667249-47667268 | Msa0854830:CDS | 30.0% | |
| ACCATCTTCAAAAAAACTGT+TGG | + | chr5_4:47667328-47667347 | Msa0854830:CDS | 30.0% | |
| !!! | ACCAACAGTTTTTTTGAAGA+TGG | - | chr5_4:47667332-47667351 | None:intergenic | 30.0% |
| TATTGATGTTGAGATCTGAT+GGG | - | chr5_4:47667411-47667430 | None:intergenic | 30.0% | |
| TTATTGATGTTGAGATCTGA+TGG | - | chr5_4:47667412-47667431 | None:intergenic | 30.0% | |
| ATCAATAAAGAGAAAGCAAG+AGG | + | chr5_4:47667424-47667443 | Msa0854830:CDS | 30.0% | |
| TTGCTTATTGTCTACTTTAC+AGG | + | chr5_4:47667607-47667626 | Msa0854830:intron | 30.0% | |
| TAGATTAGATATTACTGCAG+AGG | + | chr5_4:47667826-47667845 | Msa0854830:CDS | 30.0% | |
| CAAAAAATGCAGAATTGTGA+GGG | - | chr5_4:47667919-47667938 | None:intergenic | 30.0% | |
| ACAAAAAATGCAGAATTGTG+AGG | - | chr5_4:47667920-47667939 | None:intergenic | 30.0% | |
| !! | GTGTTGAAGTTGGTGTTTAT+AGG | - | chr5_4:47659965-47659984 | None:intergenic | 35.0% |
| !! | GAAGAGTAAAGTGTTGAAGT+TGG | - | chr5_4:47659975-47659994 | None:intergenic | 35.0% |
| CGACCCTACAAATTCAAAAA+TGG | - | chr5_4:47660858-47660877 | None:intergenic | 35.0% | |
| GAAAAGTTTCCTACCAATCT+GGG | - | chr5_4:47661235-47661254 | None:intergenic | 35.0% | |
| TGAAAAGTTTCCTACCAATC+TGG | - | chr5_4:47661236-47661255 | None:intergenic | 35.0% | |
| ! | AGATTGGTAGGAAACTTTTC+AGG | + | chr5_4:47661235-47661254 | Msa0854830:intron | 35.0% |
| ! | TTTGGCTCAATAATGCAAGT+AGG | - | chr5_4:47661330-47661349 | None:intergenic | 35.0% |
| GAAGCAAGCAAAAATTACCT+GGG | - | chr5_4:47661522-47661541 | None:intergenic | 35.0% | |
| AGAAGCAAGCAAAAATTACC+TGG | - | chr5_4:47661523-47661542 | None:intergenic | 35.0% | |
| AGCTACTTCAACCTGTTAAA+TGG | - | chr5_4:47661813-47661832 | None:intergenic | 35.0% | |
| TTACCCGTTAATGCCTTAAT+TGG | + | chr5_4:47661999-47662018 | Msa0854830:intron | 35.0% | |
| ! | CTTCCAATTAAGGCATTAAC+GGG | - | chr5_4:47662005-47662024 | None:intergenic | 35.0% |
| ATGCCTTAATTGGAAGAGTT+TGG | + | chr5_4:47662009-47662028 | Msa0854830:intron | 35.0% | |
| TTTATGTCGTCTTTCTGATG+AGG | + | chr5_4:47662320-47662339 | Msa0854830:CDS | 35.0% | |
| ! | ACTTGTTTAGAGAGCATGTA+AGG | + | chr5_4:47662484-47662503 | Msa0854830:CDS | 35.0% |
| ! | TAGAGAGCATGTAAGGAAAT+TGG | + | chr5_4:47662491-47662510 | Msa0854830:CDS | 35.0% |
| TTTAAGTGATCAGGTCATTG+TGG | + | chr5_4:47662603-47662622 | Msa0854830:intron | 35.0% | |
| ! | TTTTGCAGCATTAACATGCA+AGG | - | chr5_4:47662653-47662672 | None:intergenic | 35.0% |
| CATGTTAATGCTGCAAAAGA+CGG | + | chr5_4:47662655-47662674 | Msa0854830:intron | 35.0% | |
| ACTAACAATGGGAAAACAGA+TGG | - | chr5_4:47662728-47662747 | None:intergenic | 35.0% | |
| TAATCCAACCTTACACGTAT+GGG | + | chr5_4:47662891-47662910 | Msa0854830:intron | 35.0% | |
| GCATACCCATTGTAAATGAA+TGG | + | chr5_4:47662934-47662953 | Msa0854830:intron | 35.0% | |
| !! | TCAACTATGTTTTTCAGTCC+TGG | + | chr5_4:47663282-47663301 | Msa0854830:intron | 35.0% |
| AAACAAACAGATACTCAGTC+AGG | - | chr5_4:47663438-47663457 | None:intergenic | 35.0% | |
| CTGAAACATATGCCCTATAA+AGG | - | chr5_4:47663586-47663605 | None:intergenic | 35.0% | |
| ATGGAAGATAACAAGGTAAG+TGG | + | chr5_4:47663626-47663645 | Msa0854830:intron | 35.0% | |
| ACTTTCAAGGGAATTTACTG+AGG | - | chr5_4:47663891-47663910 | None:intergenic | 35.0% | |
| !!! | ACGGAGTTTTTGACTTTCAA+GGG | - | chr5_4:47663903-47663922 | None:intergenic | 35.0% |
| ! | TAAGCTATAAGCTAGCTTCT+TGG | + | chr5_4:47664685-47664704 | Msa0854830:intron | 35.0% |
| !! | CTGTGGTAGTTTGTTTGAAA+AGG | + | chr5_4:47665423-47665442 | Msa0854830:CDS | 35.0% |
| TGTCATGTTGAAAACCACTA+TGG | - | chr5_4:47665586-47665605 | None:intergenic | 35.0% | |
| ! | TGATAGGGACTTGAGTATTT+TGG | + | chr5_4:47665609-47665628 | Msa0854830:intron | 35.0% |
| ! | GATAGGGACTTGAGTATTTT+GGG | + | chr5_4:47665610-47665629 | Msa0854830:intron | 35.0% |
| ! | ATAGGGACTTGAGTATTTTG+GGG | + | chr5_4:47665611-47665630 | Msa0854830:intron | 35.0% |
| ! | CAATGCTTGGAGTATTTAAG+TGG | + | chr5_4:47665661-47665680 | Msa0854830:intron | 35.0% |
| CATGTATAGCGGTTATTTGT+AGG | + | chr5_4:47665755-47665774 | Msa0854830:intron | 35.0% | |
| TTTGGTACAATGAGAAGTTC+TGG | + | chr5_4:47665893-47665912 | Msa0854830:intron | 35.0% | |
| GTCTACTAAACTTTACAGCT+TGG | - | chr5_4:47666198-47666217 | None:intergenic | 35.0% | |
| ACGTTGATATGTGGATAAAC+AGG | + | chr5_4:47666228-47666247 | Msa0854830:intron | 35.0% | |
| CGTTGATATGTGGATAAACA+GGG | + | chr5_4:47666229-47666248 | Msa0854830:intron | 35.0% | |
| TAGATTGTCAAGGATGCAAT+TGG | + | chr5_4:47666341-47666360 | Msa0854830:intron | 35.0% | |
| TGCTTTCATGACATCATTAC+AGG | + | chr5_4:47666538-47666557 | Msa0854830:intron | 35.0% | |
| ! | TGCAGATTCTGCATTACTTT+TGG | - | chr5_4:47666606-47666625 | None:intergenic | 35.0% |
| TCAATAATTTCCTCTTTCGC+TGG | - | chr5_4:47666725-47666744 | None:intergenic | 35.0% | |
| ATAGAAAAGATGGGAAAGCT+TGG | + | chr5_4:47666815-47666834 | Msa0854830:CDS | 35.0% | |
| TTCTTGACTTACTGTCTAAC+TGG | + | chr5_4:47666902-47666921 | Msa0854830:CDS | 35.0% | |
| TTTGTAATCTGAGCACCAAA+CGG | - | chr5_4:47666944-47666963 | None:intergenic | 35.0% | |
| ! | GTATTTCTAAATCAGCTTGG+TGG | + | chr5_4:47666986-47667005 | Msa0854830:CDS | 35.0% |
| ! | TTGAGTTACAGCTGTTTCAA+TGG | - | chr5_4:47667224-47667243 | None:intergenic | 35.0% |
| ATTGAAACAGCTGTAACTCA+AGG | + | chr5_4:47667223-47667242 | Msa0854830:CDS | 35.0% | |
| TTGAAACAGCTGTAACTCAA+GGG | + | chr5_4:47667224-47667243 | Msa0854830:CDS | 35.0% | |
| GGCTCAATATGAAGCAAATT+AGG | + | chr5_4:47667248-47667267 | Msa0854830:CDS | 35.0% | |
| GAAGCAAATTAGGGAACTTA+AGG | + | chr5_4:47667258-47667277 | Msa0854830:CDS | 35.0% | |
| CATGCTGTCTAAATCAACAT+TGG | - | chr5_4:47667287-47667306 | None:intergenic | 35.0% | |
| !! | CAATGTTGATTTAGACAGCA+TGG | + | chr5_4:47667285-47667304 | Msa0854830:CDS | 35.0% |
| !!! | GTTGGTGATATTTTCTCATC+AGG | + | chr5_4:47667346-47667365 | Msa0854830:CDS | 35.0% |
| ! | GATATTTTCTCATCAGGTAC+TGG | + | chr5_4:47667352-47667371 | Msa0854830:CDS | 35.0% |
| ACTAAGACAGAGAAATCACA+AGG | + | chr5_4:47667507-47667526 | Msa0854830:CDS | 35.0% | |
| CTAAGACAGAGAAATCACAA+GGG | + | chr5_4:47667508-47667527 | Msa0854830:CDS | 35.0% | |
| TGGATCACTCTTCAAGTATA+TGG | - | chr5_4:47667726-47667745 | None:intergenic | 35.0% | |
| ! | GAAGGAAGAGATGATGATGA+TGG | - | chr5_4:47659919-47659938 | None:intergenic | 40.0% |
| AAGAAGAGTTAAGCGTGGAA+GGG | - | chr5_4:47660028-47660047 | None:intergenic | 40.0% | |
| TAAGAAGAGTTAAGCGTGGA+AGG | - | chr5_4:47660029-47660048 | None:intergenic | 40.0% | |
| TGTGTAAGAAGAGTTAAGCG+TGG | - | chr5_4:47660033-47660052 | None:intergenic | 40.0% | |
| CGATGCTTCGAAATTGAAGA+AGG | + | chr5_4:47660433-47660452 | Msa0854830:CDS | 40.0% | |
| TATTGCACCACTTATGACGT+CGG | - | chr5_4:47660810-47660829 | None:intergenic | 40.0% | |
| ! | GTATTTTCTGTGATTCCACC+TGG | + | chr5_4:47661003-47661022 | Msa0854830:CDS | 40.0% |
| ! | TTAAAGGCGATGAGGTTGAT+AGG | + | chr5_4:47661037-47661056 | Msa0854830:CDS | 40.0% |
| AGTTTGTGTCTCAGTCTTAC+TGG | + | chr5_4:47661186-47661205 | Msa0854830:intron | 40.0% | |
| !! | GTAGGAAACTTTTCAGGCAA+CGG | + | chr5_4:47661241-47661260 | Msa0854830:CDS | 40.0% |
| CATCATCTTTCCTTCTACCT+TGG | + | chr5_4:47661471-47661490 | Msa0854830:CDS | 40.0% | |
| ! | ATTCTGATCTGAGATGGATG+TGG | + | chr5_4:47661702-47661721 | Msa0854830:intron | 40.0% |
| ! | TCATGCTTAGTCTTCATGTC+AGG | + | chr5_4:47661955-47661974 | Msa0854830:intron | 40.0% |
| GCACCAAACTCTTCCAATTA+AGG | - | chr5_4:47662015-47662034 | None:intergenic | 40.0% | |
| GCATGTAAGGAAATTGGTTG+AGG | + | chr5_4:47662497-47662516 | Msa0854830:CDS | 40.0% | |
| GGTTGAGGAAAATATTTCGG+TGG | + | chr5_4:47662512-47662531 | Msa0854830:CDS | 40.0% | |
| GAAAATATTTCGGTGGCACT+TGG | + | chr5_4:47662519-47662538 | Msa0854830:CDS | 40.0% | |
| !! | ATCTTTGAAGCATGCTTGCA+AGG | + | chr5_4:47662752-47662771 | Msa0854830:intron | 40.0% |
| CATACGTGTAAGGTTGGATT+AGG | - | chr5_4:47662892-47662911 | None:intergenic | 40.0% | |
| CTAATCCAACCTTACACGTA+TGG | + | chr5_4:47662890-47662909 | Msa0854830:intron | 40.0% | |
| AATCCAACCTTACACGTATG+GGG | + | chr5_4:47662892-47662911 | Msa0854830:intron | 40.0% | |
| GAGTCATCTCTTCGAAACAT+GGG | - | chr5_4:47663099-47663118 | None:intergenic | 40.0% | |
| TGAGTCATCTCTTCGAAACA+TGG | - | chr5_4:47663100-47663119 | None:intergenic | 40.0% | |
| AAAATATGAACTTAGGCGCG+AGG | - | chr5_4:47663133-47663152 | None:intergenic | 40.0% | |
| CATGCCAAAAACTTCTCACT+GGG | - | chr5_4:47663169-47663188 | None:intergenic | 40.0% | |
| ACATGCCAAAAACTTCTCAC+TGG | - | chr5_4:47663170-47663189 | None:intergenic | 40.0% | |
| TGTTGGTCCAGTTTCTTTAG+TGG | + | chr5_4:47663404-47663423 | Msa0854830:CDS | 40.0% | |
| GTTGGTCCAGTTTCTTTAGT+GGG | + | chr5_4:47663405-47663424 | Msa0854830:CDS | 40.0% | |
| GTATGACGTTGACAGAAAGA+TGG | + | chr5_4:47663547-47663566 | Msa0854830:CDS | 40.0% | |
| TTTCAGATGCTCTGTCTAGT+GGG | + | chr5_4:47663600-47663619 | Msa0854830:CDS | 40.0% | |
| AGAGCAAAATGATCGTCTGA+CGG | - | chr5_4:47663751-47663770 | None:intergenic | 40.0% | |
| AAACAGCTGAAGATATTGCC+TGG | - | chr5_4:47663778-47663797 | None:intergenic | 40.0% | |
| ATCTTCAGCTGTTTGTTCTG+AGG | + | chr5_4:47663784-47663803 | Msa0854830:intron | 40.0% | |
| TCTTCAGCTGTTTGTTCTGA+GGG | + | chr5_4:47663785-47663804 | Msa0854830:intron | 40.0% | |
| ! | GGGAAACATATTTCTGTGCT+TGG | + | chr5_4:47663845-47663864 | Msa0854830:intron | 40.0% |
| !!! | GACGGAGTTTTTGACTTTCA+AGG | - | chr5_4:47663904-47663923 | None:intergenic | 40.0% |
| CACAACATTAACAGGGAGTT+TGG | - | chr5_4:47664029-47664048 | None:intergenic | 40.0% | |
| CAAACTCCCTGTTAATGTTG+TGG | + | chr5_4:47664027-47664046 | Msa0854830:intron | 40.0% | |
| AAGGTTTATCGGAAACGACT+TGG | + | chr5_4:47664435-47664454 | Msa0854830:CDS | 40.0% | |
| TTCAAGTGGCGAGTTAGAAA+TGG | + | chr5_4:47664467-47664486 | Msa0854830:CDS | 40.0% | |
| ! | GCTCGTCACACAAATTTTGA+AGG | - | chr5_4:47664512-47664531 | None:intergenic | 40.0% |
| TATACCTGCATGAAGTTCAC+TGG | - | chr5_4:47664556-47664575 | None:intergenic | 40.0% | |
| ! | TTCAGCAATGTGTTGCTGAT+GGG | + | chr5_4:47665308-47665327 | Msa0854830:CDS | 40.0% |
| !! | ATTTGTGGTGTTGTCCATAG+TGG | + | chr5_4:47665569-47665588 | Msa0854830:intron | 40.0% |
| ! | ATCGAGTTGTATGCAATGCT+TGG | + | chr5_4:47665648-47665667 | Msa0854830:intron | 40.0% |
| CGGTTATTTGTAGGCTTGTA+GGG | + | chr5_4:47665764-47665783 | Msa0854830:intron | 40.0% | |
| GGTTATTTGTAGGCTTGTAG+GGG | + | chr5_4:47665765-47665784 | Msa0854830:intron | 40.0% | |
| ! | AGAAGTGTATGGCAAAGAGA+AGG | - | chr5_4:47665850-47665869 | None:intergenic | 40.0% |
| ! | AAATGGCGGAGATAACTTTC+CGG | - | chr5_4:47665938-47665957 | None:intergenic | 40.0% |
| GAGTCGAAACACACAATCTA+AGG | - | chr5_4:47666107-47666126 | None:intergenic | 40.0% | |
| GTATGTTTCAAGCCAGACAT+TGG | + | chr5_4:47666281-47666300 | Msa0854830:intron | 40.0% | |
| TCAGTAAGAAAAGCAGCACA+TGG | + | chr5_4:47666401-47666420 | Msa0854830:CDS | 40.0% | |
| TGCTATGTCTATTGCAAGCA+AGG | + | chr5_4:47666445-47666464 | Msa0854830:CDS | 40.0% | |
| TATGTCTATTGCAAGCAAGG+CGG | + | chr5_4:47666448-47666467 | Msa0854830:CDS | 40.0% | |
| TCATGACATCATTACAGGTG+AGG | + | chr5_4:47666543-47666562 | Msa0854830:intron | 40.0% | |
| !! | GTTGATAGCTTTCAACACCT+TGG | + | chr5_4:47666640-47666659 | Msa0854830:CDS | 40.0% |
| CACCTTGGTTGTAAATGAGT+TGG | + | chr5_4:47666655-47666674 | Msa0854830:CDS | 40.0% | |
| CACCAACTCATTTACAACCA+AGG | - | chr5_4:47666660-47666679 | None:intergenic | 40.0% | |
| ! | CTTGGTTGTAAATGAGTTGG+TGG | + | chr5_4:47666658-47666677 | Msa0854830:CDS | 40.0% |
| TACCTTCACAGACACTTTCA+TGG | + | chr5_4:47667669-47667688 | Msa0854830:CDS | 40.0% | |
| ACCTTCACAGACACTTTCAT+GGG | + | chr5_4:47667670-47667689 | Msa0854830:CDS | 40.0% | |
| AATGAAATGTTTGGCCGTAG+AGG | + | chr5_4:47667875-47667894 | Msa0854830:three_prime_UTR | 40.0% | |
| GTGAGGGTAGTAAAATGGAG+GGG | - | chr5_4:47660058-47660077 | None:intergenic | 45.0% | |
| GGTGAGGGTAGTAAAATGGA+GGG | - | chr5_4:47660059-47660078 | None:intergenic | 45.0% | |
| TACGGTCTCGGTTCAAGATT+CGG | + | chr5_4:47660278-47660297 | Msa0854830:CDS | 45.0% | |
| GGAAGTAGAAATGCTGCGAT+TGG | + | chr5_4:47660302-47660321 | Msa0854830:CDS | 45.0% | |
| AGTAGAAATGCTGCGATTGG+TGG | + | chr5_4:47660305-47660324 | Msa0854830:CDS | 45.0% | |
| AAATTAACCGCCGCAACTTG+CGG | - | chr5_4:47660389-47660408 | None:intergenic | 45.0% | |
| ! | AAGTTGCGGCGGTTAATTTG+AGG | + | chr5_4:47660390-47660409 | Msa0854830:CDS | 45.0% |
| ATTGCACCACTTATGACGTC+GGG | - | chr5_4:47660809-47660828 | None:intergenic | 45.0% | |
| ! | TTTTCTGTGATTCCACCTGG+TGG | + | chr5_4:47661006-47661025 | Msa0854830:CDS | 45.0% |
| TTTCTGTGATTCCACCTGGT+GGG | + | chr5_4:47661007-47661026 | Msa0854830:CDS | 45.0% | |
| TATGTACACCAGCAGCATCT+GGG | - | chr5_4:47661098-47661117 | None:intergenic | 45.0% | |
| ATATGTACACCAGCAGCATC+TGG | - | chr5_4:47661099-47661118 | None:intergenic | 45.0% | |
| AGATGCTGCTGGTGTACATA+TGG | + | chr5_4:47661098-47661117 | Msa0854830:CDS | 45.0% | |
| TGCACTGGAGAATCTCTCAA+TGG | - | chr5_4:47661404-47661423 | None:intergenic | 45.0% | |
| ATTGAGAGATTCTCCAGTGC+AGG | + | chr5_4:47661403-47661422 | Msa0854830:intron | 45.0% | |
| !!! | AACTTTTGGAATGCCTGCAC+TGG | - | chr5_4:47661419-47661438 | None:intergenic | 45.0% |
| AAACACGCTTCCAAGGTAGA+AGG | - | chr5_4:47661484-47661503 | None:intergenic | 45.0% | |
| !! | ACCTTGGAAGCGTGTTTTCA+AGG | + | chr5_4:47661487-47661506 | Msa0854830:CDS | 45.0% |
| ACCTTGAAAACACGCTTCCA+AGG | - | chr5_4:47661491-47661510 | None:intergenic | 45.0% | |
| TTTCAAGGTCACTGAATCCC+AGG | + | chr5_4:47661502-47661521 | Msa0854830:CDS | 45.0% | |
| CAATCGTTATGCTTGTCCTG+TGG | + | chr5_4:47661543-47661562 | Msa0854830:intron | 45.0% | |
| AGCGGTATTCTGATCTGAGA+TGG | + | chr5_4:47661696-47661715 | Msa0854830:intron | 45.0% | |
| CAAACAATCACCTCTGCCAA+CGG | - | chr5_4:47661879-47661898 | None:intergenic | 45.0% | |
| ATCCAACCTTACACGTATGG+GGG | + | chr5_4:47662893-47662912 | Msa0854830:intron | 45.0% | |
| !! | TATGGGGGCATTGGATGTTA+GGG | + | chr5_4:47662908-47662927 | Msa0854830:intron | 45.0% |
| ! | GACACCCAGTGAGAAGTTTT+TGG | + | chr5_4:47663162-47663181 | Msa0854830:intron | 45.0% |
| TGAGGAGCTTGACAAGGTAT+TGG | + | chr5_4:47663320-47663339 | Msa0854830:CDS | 45.0% | |
| AAGAAACTGGACCAACACCA+CGG | - | chr5_4:47663401-47663420 | None:intergenic | 45.0% | |
| GTTTCAGATGCTCTGTCTAG+TGG | + | chr5_4:47663599-47663618 | Msa0854830:CDS | 45.0% | |
| TGGGCGAATGGAAGATAACA+AGG | + | chr5_4:47663619-47663638 | Msa0854830:CDS | 45.0% | |
| ! | GATCATTTTGCTCTTCAGCC+AGG | + | chr5_4:47663757-47663776 | Msa0854830:intron | 45.0% |
| ! | CTTCAGCTGTTTGTTCTGAG+GGG | + | chr5_4:47663786-47663805 | Msa0854830:intron | 45.0% |
| CTTGGACAGACTGTTTCAAG+TGG | + | chr5_4:47664453-47664472 | Msa0854830:CDS | 45.0% | |
| !! | GCTGCATTTTGATCCACAGA+AGG | + | chr5_4:47664530-47664549 | Msa0854830:CDS | 45.0% |
| GTCTACCAGTCTGTTTGTCA+AGG | - | chr5_4:47664711-47664730 | None:intergenic | 45.0% | |
| ! | CTTCAGCAATGTGTTGCTGA+TGG | + | chr5_4:47665307-47665326 | Msa0854830:CDS | 45.0% |
| ! | TCAGCAATGTGTTGCTGATG+GGG | + | chr5_4:47665309-47665328 | Msa0854830:CDS | 45.0% |
| !! | GCTGCTTCAACAGTTTGTTG+AGG | - | chr5_4:47665391-47665410 | None:intergenic | 45.0% |
| CATTGCATACAACTCGATGC+GGG | - | chr5_4:47665646-47665665 | None:intergenic | 45.0% | |
| GCATTGCATACAACTCGATG+CGG | - | chr5_4:47665647-47665666 | None:intergenic | 45.0% | |
| GCGGTTATTTGTAGGCTTGT+AGG | + | chr5_4:47665763-47665782 | Msa0854830:intron | 45.0% | |
| ! | GCTTGTAGGGGTTTTCTTCA+GGG | + | chr5_4:47665777-47665796 | Msa0854830:intron | 45.0% |
| ! | GAGAAGTTCTGGCAAAGAGA+AGG | + | chr5_4:47665904-47665923 | Msa0854830:intron | 45.0% |
| CAAAGAGAAGGAAGAAGCTC+CGG | + | chr5_4:47665916-47665935 | Msa0854830:intron | 45.0% | |
| ! | ACACAATCTAAGGCCCTGTT+CGG | - | chr5_4:47666097-47666116 | None:intergenic | 45.0% |
| TCAAGGATGCAATTGGTGCA+GGG | + | chr5_4:47666348-47666367 | Msa0854830:CDS | 45.0% | |
| !! | AGGGGTTGATGGATATGATG+AGG | + | chr5_4:47666367-47666386 | Msa0854830:CDS | 45.0% |
| AATAGACATAGCAGTCTCCC+TGG | - | chr5_4:47666438-47666457 | None:intergenic | 45.0% | |
| AACTGAAGAACCAGCGAAAG+AGG | + | chr5_4:47666712-47666731 | Msa0854830:CDS | 45.0% | |
| ATGATCTTCCAGAAAGGGAC+AGG | + | chr5_4:47666861-47666880 | Msa0854830:CDS | 45.0% | |
| ! | GTCTAACTGGTGATGTGACT+AGG | + | chr5_4:47666915-47666934 | Msa0854830:CDS | 45.0% |
| GATGTGACTAGGATTCCGTT+TGG | + | chr5_4:47666926-47666945 | Msa0854830:CDS | 45.0% | |
| TTTCTTTGCCAGTCATTCCC+AGG | - | chr5_4:47667015-47667034 | None:intergenic | 45.0% | |
| GTAAGCTGCAGACGGAAATA+GGG | + | chr5_4:47667137-47667156 | Msa0854830:CDS | 45.0% | |
| AAACAGCTGTAACTCAAGGG+AGG | + | chr5_4:47667227-47667246 | Msa0854830:CDS | 45.0% | |
| !! | AGGTACTGGTGAGTTTGATG+AGG | + | chr5_4:47667366-47667385 | Msa0854830:CDS | 45.0% |
| ACTATCCAACTCGCTCATTC+AGG | + | chr5_4:47667474-47667493 | Msa0854830:CDS | 45.0% | |
| TCTCTGTCTTAGTAGTGCCA+CGG | - | chr5_4:47667500-47667519 | None:intergenic | 45.0% | |
| ACAGAGAAATCACAAGGGAG+TGG | + | chr5_4:47667513-47667532 | Msa0854830:CDS | 45.0% | |
| TTCTTCCCTCAACAACTTGC+TGG | + | chr5_4:47667631-47667650 | Msa0854830:CDS | 45.0% | |
| ACAAGCCAGCAAGTTGTTGA+GGG | - | chr5_4:47667639-47667658 | None:intergenic | 45.0% | |
| !! | TCCCATGAAAGTGTCTGTGA+AGG | - | chr5_4:47667674-47667693 | None:intergenic | 45.0% |
| !! | ACTTTCATGGGAAGTGTCAG+AGG | + | chr5_4:47667682-47667701 | Msa0854830:CDS | 45.0% |
| ! | CGAGACGATTTTTCTGGACT+TGG | - | chr5_4:47667746-47667765 | None:intergenic | 45.0% |
| ! | TGCAGACGAGACGATTTTTC+TGG | - | chr5_4:47667752-47667771 | None:intergenic | 45.0% |
| TCTCGTCTGCAGTATCTGTT+GGG | + | chr5_4:47667761-47667780 | Msa0854830:CDS | 45.0% | |
| !! | AAATTATAAAAGAAAAAAAA+AGG | - | chr5_4:47662354-47662373 | None:intergenic | 5.0% |
| !!! | ATAAATTTTATTAATTGAAA+AGG | + | chr5_4:47662435-47662454 | Msa0854830:intron | 5.0% |
| !!! | AGTTAAATTAAATTTATTTT+TGG | + | chr5_4:47663512-47663531 | Msa0854830:intron | 5.0% |
| GGGTGAGGGTAGTAAAATGG+AGG | - | chr5_4:47660060-47660079 | None:intergenic | 50.0% | |
| AGGGGGTGAGGGTAGTAAAA+TGG | - | chr5_4:47660063-47660082 | None:intergenic | 50.0% | |
| TCGTCGTTGAGTGCGTAAAG+GGG | - | chr5_4:47660081-47660100 | None:intergenic | 50.0% | |
| GTCGTCGTTGAGTGCGTAAA+GGG | - | chr5_4:47660082-47660101 | None:intergenic | 50.0% | |
| TCGAGACCGACAAGTTCCTT+CGG | - | chr5_4:47660179-47660198 | None:intergenic | 50.0% | |
| ! | GCAGAGGGAGTTTATCGACT+AGG | - | chr5_4:47660205-47660224 | None:intergenic | 50.0% |
| AGTCGATAAACTCCCTCTGC+CGG | + | chr5_4:47660205-47660224 | Msa0854830:CDS | 50.0% | |
| TGGTGTGAGCAAGCAAGATG+AGG | + | chr5_4:47660608-47660627 | Msa0854830:intron | 50.0% | |
| TTAGTCCCCGACGTCATAAG+TGG | + | chr5_4:47660800-47660819 | Msa0854830:intron | 50.0% | |
| TTGCACCACTTATGACGTCG+GGG | - | chr5_4:47660808-47660827 | None:intergenic | 50.0% | |
| TGGTGCAATAACGCGACATG+AGG | + | chr5_4:47660820-47660839 | Msa0854830:intron | 50.0% | |
| TTCTGTGATTCCACCTGGTG+GGG | + | chr5_4:47661008-47661027 | Msa0854830:CDS | 50.0% | |
| TGCTGCTGGTGTACATATGG+AGG | + | chr5_4:47661101-47661120 | Msa0854830:CDS | 50.0% | |
| TCTGGGAGTGATGGTCAACA+AGG | - | chr5_4:47661218-47661237 | None:intergenic | 50.0% | |
| GTTGACCATCACTCCCAGAT+TGG | + | chr5_4:47661219-47661238 | Msa0854830:intron | 50.0% | |
| ACCATCACTCCCAGATTGGT+AGG | + | chr5_4:47661223-47661242 | Msa0854830:intron | 50.0% | |
| TCCTACCAATCTGGGAGTGA+TGG | - | chr5_4:47661227-47661246 | None:intergenic | 50.0% | |
| TTCAGGCAACGGCTTGAAGT+TGG | + | chr5_4:47661252-47661271 | Msa0854830:CDS | 50.0% | |
| TCAGGCAACGGCTTGAAGTT+GGG | + | chr5_4:47661253-47661272 | Msa0854830:CDS | 50.0% | |
| GCTTCCAAGCTGAAATCCGT+TGG | + | chr5_4:47661860-47661879 | Msa0854830:CDS | 50.0% | |
| ! | TCTGCCAACGGATTTCAGCT+TGG | - | chr5_4:47661867-47661886 | None:intergenic | 50.0% |
| AAGCTGAAATCCGTTGGCAG+AGG | + | chr5_4:47661866-47661885 | Msa0854830:CDS | 50.0% | |
| !! | GTATGGGGGCATTGGATGTT+AGG | + | chr5_4:47662907-47662926 | Msa0854830:intron | 50.0% |
| !! | ATGGGGGCATTGGATGTTAG+GGG | + | chr5_4:47662909-47662928 | Msa0854830:intron | 50.0% |
| TGTCAAGCTCCTCAACAACC+TGG | - | chr5_4:47663314-47663333 | None:intergenic | 50.0% | |
| GGTTGTTGAGGAGCTTGACA+AGG | + | chr5_4:47663314-47663333 | Msa0854830:CDS | 50.0% | |
| AGAAACTGGACCAACACCAC+GGG | - | chr5_4:47663400-47663419 | None:intergenic | 50.0% | |
| AAATGATCGTCTGACGGAGG+AGG | - | chr5_4:47663745-47663764 | None:intergenic | 50.0% | |
| GCAAAATGATCGTCTGACGG+AGG | - | chr5_4:47663748-47663767 | None:intergenic | 50.0% | |
| !! | TGAAGTTCACTGGCCTTCTG+TGG | - | chr5_4:47664546-47664565 | None:intergenic | 50.0% |
| AAGGCCAGTGAACTTCATGC+AGG | + | chr5_4:47664549-47664568 | Msa0854830:CDS | 50.0% | |
| !! | CTTGGCCTTGACAAACAGAC+TGG | + | chr5_4:47664703-47664722 | Msa0854830:intron | 50.0% |
| TGATGGGGAGCTCAATGATG+AGG | + | chr5_4:47665324-47665343 | Msa0854830:CDS | 50.0% | |
| GCAGCTCATGCAGATATCTG+TGG | + | chr5_4:47665406-47665425 | Msa0854830:CDS | 50.0% | |
| ATACAACTCGATGCGGGACT+TGG | - | chr5_4:47665640-47665659 | None:intergenic | 50.0% | |
| ! | GGCTTGTAGGGGTTTTCTTC+AGG | + | chr5_4:47665776-47665795 | Msa0854830:intron | 50.0% |
| ! | ACAATCTAAGGCCCTGTTCG+GGG | - | chr5_4:47666095-47666114 | None:intergenic | 50.0% |
| ! | CACAATCTAAGGCCCTGTTC+GGG | - | chr5_4:47666096-47666115 | None:intergenic | 50.0% |
| GTCAAGGATGCAATTGGTGC+AGG | + | chr5_4:47666347-47666366 | Msa0854830:CDS | 50.0% | |
| CAAGGATGCAATTGGTGCAG+GGG | + | chr5_4:47666349-47666368 | Msa0854830:CDS | 50.0% | |
| ! | ACATGGCTTGCGACTTACCA+GGG | + | chr5_4:47666418-47666437 | Msa0854830:CDS | 50.0% |
| ! | AAGGCGGTGAGTGATTTGTC+AGG | + | chr5_4:47666464-47666483 | Msa0854830:intron | 50.0% |
| !! | GAGTTGGTGGCAGACATCAA+AGG | + | chr5_4:47666671-47666690 | Msa0854830:CDS | 50.0% |
| ACATCAGTCCTGTCCCTTTC+TGG | - | chr5_4:47666872-47666891 | None:intergenic | 50.0% | |
| ! | AAATCAGCTTGGTGGGATCC+TGG | + | chr5_4:47666994-47667013 | Msa0854830:CDS | 50.0% |
| ! | AATCAGCTTGGTGGGATCCT+GGG | + | chr5_4:47666995-47667014 | Msa0854830:CDS | 50.0% |
| GTCTTGCTGAGCAAGCTTTC+AGG | + | chr5_4:47667053-47667072 | Msa0854830:CDS | 50.0% | |
| AGCTTTCAGGCAACAAGCTG+AGG | + | chr5_4:47667066-47667085 | Msa0854830:CDS | 50.0% | |
| !! | GCTGAGGTACTTTTAGCCGA+TGG | + | chr5_4:47667082-47667101 | Msa0854830:CDS | 50.0% |
| GGTAAGCTGCAGACGGAAAT+AGG | + | chr5_4:47667136-47667155 | Msa0854830:CDS | 50.0% | |
| !!! | GGCAGCTGCCATTTTTGTAG+TGG | - | chr5_4:47667203-47667222 | None:intergenic | 50.0% |
| CACAAGCCAGCAAGTTGTTG+AGG | - | chr5_4:47667640-47667659 | None:intergenic | 50.0% | |
| GTCTCGTCTGCAGTATCTGT+TGG | + | chr5_4:47667760-47667779 | Msa0854830:CDS | 50.0% | |
| GGCCTCTCAATATGCCTCTA+CGG | - | chr5_4:47667892-47667911 | None:intergenic | 50.0% | |
| ATGCAGAATTGTGAGGGCTC+TGG | - | chr5_4:47667913-47667932 | None:intergenic | 50.0% | |
| TGAGTGCGTAAAGGGGGTGA+GGG | - | chr5_4:47660074-47660093 | None:intergenic | 55.0% | |
| TTGAGTGCGTAAAGGGGGTG+AGG | - | chr5_4:47660075-47660094 | None:intergenic | 55.0% | |
| CGTCGTTGAGTGCGTAAAGG+GGG | - | chr5_4:47660080-47660099 | None:intergenic | 55.0% | |
| CGTCGTCGTTGAGTGCGTAA+AGG | - | chr5_4:47660083-47660102 | None:intergenic | 55.0% | |
| ! | TAGCGTCGGAGGAACATCGA+GGG | - | chr5_4:47660121-47660140 | None:intergenic | 55.0% |
| ! | TTAGCGTCGGAGGAACATCG+AGG | - | chr5_4:47660122-47660141 | None:intergenic | 55.0% |
| ! | AGAAGGAGGGGGATTAGCGT+CGG | - | chr5_4:47660135-47660154 | None:intergenic | 55.0% |
| ! | GGTTGTGATGGAGAAGGAGG+GGG | - | chr5_4:47660146-47660165 | None:intergenic | 55.0% |
| ! | CGGTTGTGATGGAGAAGGAG+GGG | - | chr5_4:47660147-47660166 | None:intergenic | 55.0% |
| ! | GCGGTTGTGATGGAGAAGGA+GGG | - | chr5_4:47660148-47660167 | None:intergenic | 55.0% |
| ! | TGCGGTTGTGATGGAGAAGG+AGG | - | chr5_4:47660149-47660168 | None:intergenic | 55.0% |
| ! | CGTTGCGGTTGTGATGGAGA+AGG | - | chr5_4:47660152-47660171 | None:intergenic | 55.0% |
| AGACCGACAAGTTCCTTCGG+CGG | - | chr5_4:47660176-47660195 | None:intergenic | 55.0% | |
| GTTGCAGCTGGATACGGTCT+CGG | + | chr5_4:47660266-47660285 | Msa0854830:CDS | 55.0% | |
| GGTCTCGGTTCAAGATTCGG+AGG | + | chr5_4:47660281-47660300 | Msa0854830:CDS | 55.0% | |
| !! | ATTGGTGGTGCTGCTGCTGT+TGG | + | chr5_4:47660320-47660339 | Msa0854830:CDS | 55.0% |
| AGCATAAGCAGCAGCACCAC+CGG | - | chr5_4:47660351-47660370 | None:intergenic | 55.0% | |
| TGCTACTGCACCGCAAGTTG+CGG | + | chr5_4:47660376-47660395 | Msa0854830:CDS | 55.0% | |
| GGAGGAGCTTAAAGGCGATG+AGG | + | chr5_4:47661029-47661048 | Msa0854830:CDS | 55.0% | |
| ! | CTTGATGACCCAGATGCTGC+TGG | + | chr5_4:47661087-47661106 | Msa0854830:CDS | 55.0% |
| CAGGCAACGGCTTGAAGTTG+GGG | + | chr5_4:47661254-47661273 | Msa0854830:CDS | 55.0% | |
| TGCCCCCATACGTGTAAGGT+TGG | - | chr5_4:47662898-47662917 | None:intergenic | 55.0% | |
| CCAATGCCCCCATACGTGTA+AGG | - | chr5_4:47662902-47662921 | None:intergenic | 55.0% | |
| ! | CCTTACACGTATGGGGGCAT+TGG | + | chr5_4:47662899-47662918 | Msa0854830:intron | 55.0% |
| TTTCAGTCCTGGAGTGAGCC+AGG | + | chr5_4:47663293-47663312 | Msa0854830:intron | 55.0% | |
| TCAACAACCTGGCTCACTCC+AGG | - | chr5_4:47663303-47663322 | None:intergenic | 55.0% | |
| TGGAGTGAGCCAGGTTGTTG+AGG | + | chr5_4:47663302-47663321 | Msa0854830:CDS | 55.0% | |
| ! | TGCTCTGTCTAGTGGGCGAA+TGG | + | chr5_4:47663607-47663626 | Msa0854830:CDS | 55.0% |
| AACCAGAAACCACCCCGAAC+AGG | + | chr5_4:47666080-47666099 | Msa0854830:intron | 55.0% | |
| ACCAGAAACCACCCCGAACA+GGG | + | chr5_4:47666081-47666100 | Msa0854830:intron | 55.0% | |
| GCAATTGGTGCAGGGGTTGA+TGG | + | chr5_4:47666356-47666375 | Msa0854830:CDS | 55.0% | |
| ! | CACATGGCTTGCGACTTACC+AGG | + | chr5_4:47666417-47666436 | Msa0854830:CDS | 55.0% |
| AGCCGATGGACAGTTGACGA+AGG | + | chr5_4:47667096-47667115 | Msa0854830:CDS | 55.0% | |
| GGCCTTCGTCAACTGTCCAT+CGG | - | chr5_4:47667101-47667120 | None:intergenic | 55.0% | |
| ATGGACAGTTGACGAAGGCC+AGG | + | chr5_4:47667101-47667120 | Msa0854830:CDS | 55.0% | |
| TGGACAGTTGACGAAGGCCA+GGG | + | chr5_4:47667102-47667121 | Msa0854830:CDS | 55.0% | |
| GCAGCTTGGTAAGCTGCAGA+CGG | + | chr5_4:47667129-47667148 | Msa0854830:CDS | 55.0% | |
| ACTCCACTGCAGCTGCACTT+CGG | + | chr5_4:47667792-47667811 | Msa0854830:CDS | 55.0% | |
| ! | GGCCGTAGAGGCATATTGAG+AGG | + | chr5_4:47667887-47667906 | Msa0854830:three_prime_UTR | 55.0% |
| AGTTCCTTCGGCGGTCGTTG+CGG | - | chr5_4:47660167-47660186 | None:intergenic | 60.0% | |
| CGACCGCCGAAGGAACTTGT+CGG | + | chr5_4:47660170-47660189 | Msa0854830:CDS | 60.0% | |
| TTGCAAGTCTCGCCGGCAGA+GGG | - | chr5_4:47660220-47660239 | None:intergenic | 60.0% | |
| !! | GCTGCTGCTGTTGGTGTTGC+CGG | + | chr5_4:47660329-47660348 | Msa0854830:CDS | 60.0% |
| TACTGCACCGCAAGTTGCGG+CGG | + | chr5_4:47660379-47660398 | Msa0854830:CDS | 60.0% | |
| TGTGATTCCACCTGGTGGGG+AGG | + | chr5_4:47661011-47661030 | Msa0854830:CDS | 60.0% | |
| TTAAGCTCCTCCCCACCAGG+TGG | - | chr5_4:47661021-47661040 | None:intergenic | 60.0% | |
| CCTTTAAGCTCCTCCCCACC+AGG | - | chr5_4:47661024-47661043 | None:intergenic | 60.0% | |
| CCTGGTGGGGAGGAGCTTAA+AGG | + | chr5_4:47661021-47661040 | Msa0854830:CDS | 60.0% | |
| GCTTGAAGTTGGGGACCGTG+AGG | + | chr5_4:47661263-47661282 | Msa0854830:CDS | 60.0% | |
| TGAAGTTGGGGACCGTGAGG+CGG | + | chr5_4:47661266-47661285 | Msa0854830:CDS | 60.0% | |
| GCTGCTCAACATCCGCCTCA+CGG | - | chr5_4:47661281-47661300 | None:intergenic | 60.0% | |
| AGGCGGATGTTGAGCAGCGT+CGG | + | chr5_4:47661283-47661302 | Msa0854830:CDS | 60.0% | |
| GACATAGATCGCCTTGCCCG+TGG | + | chr5_4:47663381-47663400 | Msa0854830:CDS | 60.0% | |
| ! | ATCTAAGGCCCTGTTCGGGG+TGG | - | chr5_4:47666092-47666111 | None:intergenic | 60.0% |
| GGTGGGATCCTGGGAATGAC+TGG | + | chr5_4:47667004-47667023 | Msa0854830:CDS | 60.0% | |
| ACAGTTGACGAAGGCCAGGG+TGG | + | chr5_4:47667105-47667124 | Msa0854830:CDS | 60.0% | |
| CTTACCAAGCTGCTCCACCC+TGG | - | chr5_4:47667122-47667141 | None:intergenic | 60.0% | |
| CACGGCCTGAATGAGCGAGT+TGG | - | chr5_4:47667482-47667501 | None:intergenic | 60.0% | |
| CAACTCGCTCATTCAGGCCG+TGG | + | chr5_4:47667480-47667499 | Msa0854830:CDS | 60.0% | |
| CTCCACTGCAGCTGCACTTC+GGG | + | chr5_4:47667793-47667812 | Msa0854830:CDS | 60.0% | |
| TTCCCGAAGTGCAGCTGCAG+TGG | - | chr5_4:47667798-47667817 | None:intergenic | 60.0% | |
| ! | AGGAGGGGGATTAGCGTCGG+AGG | - | chr5_4:47660132-47660151 | None:intergenic | 65.0% |
| GGCGGTCGTTGCGGTTGTGA+TGG | - | chr5_4:47660158-47660177 | None:intergenic | 65.0% | |
| ACAACCGCAACGACCGCCGA+AGG | + | chr5_4:47660160-47660179 | Msa0854830:CDS | 65.0% | |
| GTTGCAAGTCTCGCCGGCAG+AGG | - | chr5_4:47660221-47660240 | None:intergenic | 65.0% | |
| GCGGAGGTTGCAAGTCTCGC+CGG | - | chr5_4:47660227-47660246 | None:intergenic | 65.0% | |
| ACCTCCGCCGTCATCGTTGC+CGG | + | chr5_4:47660239-47660258 | Msa0854830:CDS | 65.0% | |
| ! | AACCGCGCCGGCAACGATGA+CGG | - | chr5_4:47660249-47660268 | None:intergenic | 65.0% |
| GTATCCAGCTGCAACCGCGC+CGG | - | chr5_4:47660261-47660280 | None:intergenic | 65.0% | |
| GGCGCGGTTGCAGCTGGATA+CGG | + | chr5_4:47660260-47660279 | Msa0854830:CDS | 65.0% | |
| !! | GCTGCTGTTGGTGTTGCCGG+TGG | + | chr5_4:47660332-47660351 | Msa0854830:CDS | 65.0% |
| GGCGGATGTTGAGCAGCGTC+GGG | + | chr5_4:47661284-47661303 | Msa0854830:CDS | 65.0% | |
| GATCGCCTTGCCCGTGGTGT+TGG | + | chr5_4:47663387-47663406 | Msa0854830:CDS | 65.0% | |
| CTGGACCAACACCACGGGCA+AGG | - | chr5_4:47663395-47663414 | None:intergenic | 65.0% | |
| GCCCTGTTCGGGGTGGTTTC+TGG | - | chr5_4:47666085-47666104 | None:intergenic | 65.0% | |
| AAGGCCAGGGTGGAGCAGCT+TGG | + | chr5_4:47667115-47667134 | Msa0854830:CDS | 65.0% | |
| ! | GCCGGCAACGATGACGGCGG+AGG | - | chr5_4:47660243-47660262 | None:intergenic | 75.0% |
| ! | CGCGCCGGCAACGATGACGG+CGG | - | chr5_4:47660246-47660265 | None:intergenic | 75.0% |
| CGCCGTCATCGTTGCCGGCG+CGG | + | chr5_4:47660244-47660263 | Msa0854830:CDS | 75.0% | |
| GTTGCCGGCGCGGTTGCAGC+TGG | + | chr5_4:47660254-47660273 | Msa0854830:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 47659864 | 47668118 | 47659864 | ID=Msa0854830;Name=Msa0854830 |
| chr5_4 | mRNA | 47659864 | 47668118 | 47659864 | ID=Msa0854830-mRNA-1;Parent=Msa0854830;Name=Msa0854830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=156|0.92|1|1|1|1|14|250|973 |
| chr5_4 | exon | 47659864 | 47660480 | 47659864 | ID=Msa0854830-mRNA-1:exon:15000;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47660999 | 47661122 | 47660999 | ID=Msa0854830-mRNA-1:exon:15001;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47661237 | 47661305 | 47661237 | ID=Msa0854830-mRNA-1:exon:15002;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47661425 | 47661523 | 47661425 | ID=Msa0854830-mRNA-1:exon:15003;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47661821 | 47661887 | 47661821 | ID=Msa0854830-mRNA-1:exon:15004;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47662277 | 47662341 | 47662277 | ID=Msa0854830-mRNA-1:exon:15005;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47662474 | 47662568 | 47662474 | ID=Msa0854830-mRNA-1:exon:15006;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47663299 | 47663426 | 47663299 | ID=Msa0854830-mRNA-1:exon:15007;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47663540 | 47663640 | 47663540 | ID=Msa0854830-mRNA-1:exon:15008;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47664354 | 47664570 | 47664354 | ID=Msa0854830-mRNA-1:exon:15009;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47665290 | 47665444 | 47665290 | ID=Msa0854830-mRNA-1:exon:15010;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47666344 | 47666469 | 47666344 | ID=Msa0854830-mRNA-1:exon:15011;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47666560 | 47667534 | 47666560 | ID=Msa0854830-mRNA-1:exon:15012;Parent=Msa0854830-mRNA-1 |
| chr5_4 | exon | 47667629 | 47668118 | 47667629 | ID=Msa0854830-mRNA-1:exon:15013;Parent=Msa0854830-mRNA-1 |
| chr5_4 | five_prime_UTR | 47659864 | 47660019 | 47659864 | ID=Msa0854830-mRNA-1:five_prime_utr;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47660020 | 47660480 | 47660020 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47660999 | 47661122 | 47660999 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47661237 | 47661305 | 47661237 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47661425 | 47661523 | 47661425 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47661821 | 47661887 | 47661821 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47662277 | 47662341 | 47662277 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47662474 | 47662568 | 47662474 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47663299 | 47663426 | 47663299 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47663540 | 47663640 | 47663540 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47664354 | 47664570 | 47664354 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47665290 | 47665444 | 47665290 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47666344 | 47666469 | 47666344 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47666560 | 47667534 | 47666560 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | CDS | 47667629 | 47667868 | 47667629 | ID=Msa0854830-mRNA-1:cds;Parent=Msa0854830-mRNA-1 |
| chr5_4 | three_prime_UTR | 47667869 | 47668118 | 47667869 | ID=Msa0854830-mRNA-1:three_prime_utr;Parent=Msa0854830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
