Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547110 | XP_024636166.1 | 88.539 | 349 | 4 | 4 | 1 | 313 | 1 | 349 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547110 | sp|F4IHS9|UXT1_ARATH | 69.741 | 347 | 66 | 5 | 1 | 313 | 1 | 342 | 3.40e-163 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547110 | A0A072ULS8 | 88.539 | 349 | 4 | 4 | 1 | 313 | 1 | 349 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0193850 | Msa0547110 | 0.850847 | 1.303338e-60 | -8.615850e-47 |
| Msa0235710 | Msa0547110 | 0.811815 | 5.798070e-51 | -8.615850e-47 |
| Msa0392380 | Msa0547110 | 0.804657 | 1.944240e-49 | -8.615850e-47 |
| Msa0440320 | Msa0547110 | 0.810729 | 9.971989e-51 | -8.615850e-47 |
| Msa0282220 | Msa0547110 | 0.815888 | 7.340239e-52 | -8.615850e-47 |
| Msa0314170 | Msa0547110 | 0.855335 | 6.758312e-62 | -8.615850e-47 |
| Msa0487500 | Msa0547110 | 0.804296 | 2.312281e-49 | -8.615850e-47 |
| Msa0547110 | Msa0688820 | 0.806297 | 8.809247e-50 | -8.615850e-47 |
| Msa0547110 | Msa0968350 | 0.801516 | 8.680212e-49 | -8.615850e-47 |
| Msa0547110 | Msa1078930 | 0.805490 | 1.301479e-49 | -8.615850e-47 |
| Msa0547110 | Msa1123930 | 0.803739 | 3.019450e-49 | -8.615850e-47 |
| Msa0547110 | Msa1130430 | 0.815248 | 1.018909e-51 | -8.615850e-47 |
| Msa0547110 | Msa1340700 | 0.813307 | 2.734956e-51 | -8.615850e-47 |
| Msa0547110 | Msa1426070 | 0.808578 | 2.891597e-50 | -8.615850e-47 |
| Msa0547110 | Msa1436420 | 0.820119 | 8.114756e-53 | -8.615850e-47 |
| Msa0547110 | Msa1445050 | 0.800719 | 1.263306e-48 | -8.615850e-47 |
| Msa0547110 | Msa1446110 | 0.820529 | 6.535664e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547110 | MtrunA17_Chr4g0028931 | 88.539 | 349 | 4 | 4 | 1 | 313 | 1 | 349 | 0.0 | 595 |
| Msa0547110 | MtrunA17_Chr2g0326791 | 75.000 | 348 | 49 | 5 | 1 | 311 | 1 | 347 | 3.12e-179 | 498 |
| Msa0547110 | MtrunA17_Chr6g0467391 | 76.752 | 314 | 46 | 3 | 1 | 287 | 1 | 314 | 1.33e-166 | 465 |
| Msa0547110 | MtrunA17_Chr6g0467371 | 76.752 | 314 | 46 | 3 | 1 | 287 | 1 | 314 | 1.33e-166 | 465 |
| Msa0547110 | MtrunA17_Chr3g0128951 | 58.790 | 347 | 106 | 4 | 1 | 310 | 1 | 347 | 1.96e-127 | 367 |
| Msa0547110 | MtrunA17_Chr3g0128961 | 56.286 | 350 | 97 | 3 | 1 | 294 | 1 | 350 | 6.50e-119 | 346 |
| Msa0547110 | MtrunA17_Chr1g0157501 | 36.634 | 303 | 161 | 4 | 13 | 284 | 14 | 316 | 8.77e-45 | 155 |
| Msa0547110 | MtrunA17_Chr8g0383381 | 32.927 | 328 | 187 | 6 | 12 | 307 | 15 | 341 | 1.17e-44 | 155 |
| Msa0547110 | MtrunA17_Chr3g0129401 | 34.000 | 300 | 170 | 4 | 6 | 278 | 10 | 308 | 9.28e-44 | 152 |
| Msa0547110 | MtrunA17_Chr5g0393381 | 36.877 | 301 | 159 | 5 | 6 | 276 | 9 | 308 | 5.43e-42 | 148 |
| Msa0547110 | MtrunA17_Chr1g0201531 | 34.130 | 293 | 166 | 3 | 13 | 278 | 16 | 308 | 8.36e-41 | 144 |
| Msa0547110 | MtrunA17_Chr2g0298931 | 26.599 | 297 | 184 | 5 | 22 | 288 | 66 | 358 | 1.02e-22 | 97.1 |
| Msa0547110 | MtrunA17_Chr5g0446851 | 25.075 | 335 | 216 | 6 | 10 | 313 | 55 | 385 | 1.40e-20 | 91.3 |
| Msa0547110 | MtrunA17_Chr2g0307091 | 23.235 | 340 | 198 | 14 | 22 | 312 | 25 | 350 | 1.77e-14 | 73.2 |
| Msa0547110 | MtrunA17_Chr7g0270591 | 24.928 | 345 | 204 | 10 | 4 | 310 | 8 | 335 | 1.43e-13 | 70.5 |
| Msa0547110 | MtrunA17_Chr3g0137921 | 23.034 | 356 | 219 | 10 | 1 | 310 | 1 | 347 | 5.01e-13 | 68.9 |
| Msa0547110 | MtrunA17_Chr3g0114581 | 23.077 | 312 | 198 | 8 | 22 | 293 | 26 | 335 | 9.10e-13 | 68.2 |
| Msa0547110 | MtrunA17_Chr1g0160071 | 22.968 | 283 | 183 | 6 | 20 | 269 | 23 | 303 | 6.03e-12 | 65.5 |
| Msa0547110 | MtrunA17_Chr4g0063601 | 24.756 | 307 | 194 | 14 | 22 | 308 | 25 | 314 | 1.86e-11 | 63.9 |
| Msa0547110 | MtrunA17_Chr1g0149401 | 26.966 | 178 | 118 | 4 | 102 | 270 | 165 | 339 | 4.61e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547110 | AT2G28315.1 | 69.741 | 347 | 66 | 5 | 1 | 313 | 1 | 342 | 3.46e-164 | 461 |
| Msa0547110 | AT2G28315.2 | 74.671 | 304 | 51 | 2 | 1 | 278 | 1 | 304 | 2.05e-159 | 447 |
| Msa0547110 | AT1G06890.4 | 60.177 | 339 | 94 | 3 | 1 | 313 | 1 | 324 | 2.65e-127 | 367 |
| Msa0547110 | AT1G06890.3 | 60.177 | 339 | 94 | 3 | 1 | 313 | 1 | 324 | 2.66e-127 | 367 |
| Msa0547110 | AT1G06890.2 | 60.177 | 339 | 94 | 3 | 1 | 313 | 1 | 324 | 3.91e-127 | 367 |
| Msa0547110 | AT1G06890.1 | 60.177 | 339 | 94 | 3 | 1 | 313 | 1 | 324 | 3.91e-127 | 367 |
| Msa0547110 | AT2G30460.1 | 61.585 | 328 | 92 | 3 | 1 | 294 | 1 | 328 | 5.96e-127 | 367 |
| Msa0547110 | AT2G30460.2 | 61.585 | 328 | 92 | 3 | 1 | 294 | 1 | 328 | 5.96e-127 | 367 |
| Msa0547110 | AT2G30460.3 | 57.929 | 309 | 92 | 5 | 21 | 294 | 2 | 307 | 5.85e-115 | 335 |
| Msa0547110 | AT2G30460.6 | 57.929 | 309 | 92 | 5 | 21 | 294 | 2 | 307 | 5.85e-115 | 335 |
| Msa0547110 | AT2G30460.5 | 57.929 | 309 | 92 | 5 | 21 | 294 | 2 | 307 | 5.85e-115 | 335 |
| Msa0547110 | AT2G30460.4 | 60.987 | 223 | 61 | 2 | 1 | 197 | 1 | 223 | 2.39e-76 | 237 |
| Msa0547110 | AT5G42420.1 | 36.012 | 336 | 183 | 6 | 5 | 310 | 9 | 342 | 2.67e-50 | 170 |
| Msa0547110 | AT4G39390.3 | 32.602 | 319 | 185 | 4 | 12 | 303 | 16 | 331 | 1.47e-48 | 165 |
| Msa0547110 | AT4G39390.1 | 32.602 | 319 | 185 | 4 | 12 | 303 | 20 | 335 | 2.18e-48 | 165 |
| Msa0547110 | AT4G39390.2 | 32.602 | 319 | 185 | 4 | 12 | 303 | 20 | 335 | 2.18e-48 | 165 |
| Msa0547110 | AT1G21070.1 | 35.197 | 304 | 169 | 3 | 3 | 278 | 7 | 310 | 1.49e-47 | 163 |
| Msa0547110 | AT4G09810.1 | 32.399 | 321 | 187 | 4 | 13 | 306 | 16 | 333 | 2.72e-47 | 162 |
| Msa0547110 | AT1G76670.2 | 34.667 | 300 | 168 | 3 | 6 | 277 | 9 | 308 | 1.02e-44 | 155 |
| Msa0547110 | AT1G76670.1 | 34.667 | 300 | 168 | 3 | 6 | 277 | 9 | 308 | 1.02e-44 | 155 |
| Msa0547110 | AT1G34020.2 | 31.329 | 316 | 187 | 4 | 18 | 306 | 21 | 333 | 2.21e-44 | 154 |
| Msa0547110 | AT1G34020.1 | 31.329 | 316 | 187 | 4 | 18 | 306 | 21 | 333 | 2.21e-44 | 154 |
| Msa0547110 | AT1G34020.3 | 31.329 | 316 | 187 | 4 | 18 | 306 | 21 | 333 | 2.21e-44 | 154 |
| Msa0547110 | AT5G42420.2 | 34.516 | 310 | 156 | 7 | 5 | 310 | 9 | 275 | 8.14e-41 | 144 |
| Msa0547110 | AT4G09810.2 | 32.530 | 249 | 138 | 4 | 85 | 306 | 31 | 276 | 1.58e-36 | 132 |
| Msa0547110 | AT4G09810.3 | 33.333 | 207 | 112 | 2 | 13 | 193 | 16 | 222 | 1.57e-26 | 105 |
| Msa0547110 | AT5G57100.1 | 27.241 | 290 | 177 | 5 | 14 | 273 | 67 | 352 | 4.40e-25 | 104 |
| Msa0547110 | AT5G55950.4 | 25.078 | 319 | 195 | 7 | 22 | 310 | 8 | 312 | 2.58e-21 | 92.8 |
| Msa0547110 | AT5G55950.1 | 24.773 | 331 | 205 | 7 | 10 | 310 | 56 | 372 | 3.11e-21 | 93.6 |
| Msa0547110 | AT5G55950.3 | 24.675 | 308 | 188 | 7 | 33 | 310 | 1 | 294 | 2.09e-18 | 84.7 |
| Msa0547110 | AT5G57100.2 | 25.417 | 240 | 145 | 5 | 10 | 219 | 63 | 298 | 6.16e-15 | 74.3 |
| Msa0547110 | AT4G32390.1 | 23.099 | 355 | 219 | 9 | 1 | 309 | 1 | 347 | 3.24e-14 | 72.8 |
| Msa0547110 | AT5G25400.1 | 24.159 | 327 | 200 | 11 | 22 | 309 | 29 | 346 | 3.22e-13 | 69.7 |
| Msa0547110 | AT5G57100.3 | 29.268 | 164 | 92 | 3 | 10 | 149 | 63 | 226 | 3.94e-13 | 68.9 |
| Msa0547110 | AT2G25520.1 | 23.955 | 359 | 212 | 12 | 1 | 310 | 1 | 347 | 3.98e-13 | 69.7 |
| Msa0547110 | AT5G11230.1 | 23.939 | 330 | 202 | 9 | 22 | 311 | 29 | 349 | 5.77e-12 | 66.2 |
| Msa0547110 | AT5G57100.4 | 26.994 | 163 | 109 | 2 | 117 | 273 | 79 | 237 | 1.64e-11 | 64.3 |
| Msa0547110 | AT5G55950.2 | 24.583 | 240 | 147 | 5 | 10 | 219 | 56 | 291 | 3.45e-11 | 63.5 |
| Msa0547110 | AT4G32272.1 | 30.220 | 182 | 107 | 5 | 102 | 270 | 165 | 339 | 5.25e-11 | 63.2 |
| Msa0547110 | AT4G32272.2 | 30.220 | 182 | 107 | 5 | 102 | 270 | 180 | 354 | 5.84e-11 | 63.2 |
| Msa0547110 | AT1G21870.1 | 23.488 | 281 | 180 | 6 | 22 | 269 | 26 | 304 | 7.56e-11 | 62.8 |
Find 72 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACTGAAAGGAACATTAT+TGG | 0.175320 | 4_1:+39862482 | Msa0547110:CDS |
| GCAGCAATTCTCTTTGTTTC+AGG | 0.186376 | 4_1:+39861868 | Msa0547110:CDS |
| TTGGACTTGAGAAGAATTTC+AGG | 0.194385 | 4_1:+39859791 | Msa0547110:five_prime_UTR |
| TCTCTATTCTTCTTACTTGT+TGG | 0.215453 | 4_1:+39861388 | Msa0547110:CDS |
| CTCAAGACTTGTCTTGTTCT+AGG | 0.234530 | 4_1:+39862431 | Msa0547110:CDS |
| ACTTGTCTTGTTCTAGGATT+TGG | 0.249840 | 4_1:+39862437 | Msa0547110:CDS |
| TTCATTGAGTTTATGTTTGT+TGG | 0.255758 | 4_1:-39859675 | None:intergenic |
| TTTAGCACCTTTCTAGTAAT+AGG | 0.278992 | 4_1:+39862371 | Msa0547110:CDS |
| TCTTCTCTCTTTCTCTCTCT+TGG | 0.280407 | 4_1:+39859772 | Msa0547110:five_prime_UTR |
| CAATTCCATTGGATTCTATC+AGG | 0.280510 | 4_1:+39860604 | Msa0547110:CDS |
| AAAACCAAGATTGCTCATTA+AGG | 0.290101 | 4_1:-39860313 | None:intergenic |
| TAGACTATAATGCATCTAAT+TGG | 0.296692 | 4_1:+39859495 | Msa0547110:five_prime_UTR |
| TGAGTTTATGTTTGTTGGTT+TGG | 0.307355 | 4_1:-39859670 | None:intergenic |
| GTTCTCTTGAGTGCAGAAAT+AGG | 0.307448 | 4_1:-39862540 | None:intergenic |
| AGTAGTAGTGACTATCTTAT+TGG | 0.314064 | 4_1:-39859750 | None:intergenic |
| GTAGTAGTGACTATCTTATT+GGG | 0.324549 | 4_1:-39859749 | None:intergenic |
| ACATGGACATTAAGATTTCA+TGG | 0.332488 | 4_1:-39859592 | None:intergenic |
| ACTTACAAGTTGGCATTTGA+TGG | 0.352879 | 4_1:+39860448 | Msa0547110:CDS |
| ATGATATGACAAAATATAAC+TGG | 0.354195 | 4_1:-39862945 | None:intergenic |
| ATAGAGAGAGTTTAATATTC+CGG | 0.359278 | 4_1:-39861372 | None:intergenic |
| CATTGACACATGATGTTGTT+TGG | 0.363350 | 4_1:-39862995 | None:intergenic |
| AAAGCCTTAATGAGCAATCT+TGG | 0.364932 | 4_1:+39860309 | Msa0547110:CDS |
| CCCAACACTTGATATGTTAC+TGG | 0.372610 | 4_1:-39862404 | None:intergenic |
| TTCTTCTTACTTGTTGGAGT+TGG | 0.376842 | 4_1:+39861394 | Msa0547110:CDS |
| AAATATATTGGTGGCAAAGA+TGG | 0.379539 | 4_1:+39860203 | Msa0547110:exon |
| AGCCTTGGCTTCAATTCCAT+TGG | 0.380768 | 4_1:+39860593 | Msa0547110:CDS |
| AAGATCTTTCATAATATTTG+TGG | 0.396669 | 4_1:+39862815 | Msa0547110:three_prime_UTR |
| TTCCAACAAAATTGAGTTGA+AGG | 0.414250 | 4_1:-39861435 | None:intergenic |
| ATGACAGTCTTCATGTCAAC+AGG | 0.417274 | 4_1:-39860524 | None:intergenic |
| AGTCTTCATGTCAACAGGTT+TGG | 0.432306 | 4_1:-39860519 | None:intergenic |
| GGATTTCTCAACTTGAGCCT+TGG | 0.433359 | 4_1:+39860578 | Msa0547110:CDS |
| CTTTGTTTCAGGCCCTCTTG+TGG | 0.448438 | 4_1:+39861879 | Msa0547110:CDS |
| TCTACGTTTCAATCTGTTTG+AGG | 0.451737 | 4_1:+39860496 | Msa0547110:CDS |
| CAAATATTCTCCTCTTGTCT+TGG | 0.453651 | 4_1:+39861936 | Msa0547110:CDS |
| AATATATTGGTGGCAAAGAT+GGG | 0.455967 | 4_1:+39860204 | Msa0547110:exon |
| TAATGTTCCTTTCAGTGAAA+GGG | 0.465034 | 4_1:-39862478 | None:intergenic |
| ATTCTAAATGGTGTCTCCAT+TGG | 0.473165 | 4_1:+39860557 | Msa0547110:CDS |
| TTTCAGGCCCTCTTGTGGAT+CGG | 0.483362 | 4_1:+39861884 | Msa0547110:CDS |
| CCAGTAACATATCAAGTGTT+GGG | 0.487472 | 4_1:+39862404 | Msa0547110:CDS |
| ATAATGTTCCTTTCAGTGAA+AGG | 0.490738 | 4_1:-39862479 | None:intergenic |
| AAGAGAATTGCTGCTTGGAA+TGG | 0.498395 | 4_1:-39861859 | None:intergenic |
| GATAGCTAGAAGTGAAAGAA+TGG | 0.517732 | 4_1:-39861458 | None:intergenic |
| TCCAGTAACATATCAAGTGT+TGG | 0.519813 | 4_1:+39862403 | Msa0547110:CDS |
| TGGTGCACTATTCCTTTCTG+TGG | 0.529063 | 4_1:+39860257 | Msa0547110:CDS |
| TCCTTTCAGTGAAAGGGTCA+TGG | 0.532382 | 4_1:-39862472 | None:intergenic |
| TCCATGACCCTTTCACTGAA+AGG | 0.541368 | 4_1:+39862471 | Msa0547110:CDS |
| ACAACACATACCTTATACAA+AGG | 0.541517 | 4_1:-39859841 | None:intergenic |
| AAACAAAGAGAATTGCTGCT+TGG | 0.548746 | 4_1:-39861864 | None:intergenic |
| GGCTTTGTTGCATATGACAA+TGG | 0.551399 | 4_1:-39860292 | None:intergenic |
| ACATTACTTACCAAGACAAG+AGG | 0.560103 | 4_1:-39861946 | None:intergenic |
| GCTATCATAACAACATGTGT+TGG | 0.567567 | 4_1:+39861475 | Msa0547110:CDS |
| CAGCCACAACACTTACAAGT+TGG | 0.572331 | 4_1:+39860438 | Msa0547110:intron |
| ATCCAATGGAATTGAAGCCA+AGG | 0.586597 | 4_1:-39860595 | None:intergenic |
| AATTTGATTTACACTAAACA+AGG | 0.586605 | 4_1:-39862863 | None:intergenic |
| TGAAACGTAGAGCCACATGA+AGG | 0.588235 | 4_1:-39860484 | None:intergenic |
| AGACAGAAGAAGCCACAGAA+AGG | 0.589376 | 4_1:-39860269 | None:intergenic |
| GCTCAAGTTGAGAAATCCAA+TGG | 0.598682 | 4_1:-39860573 | None:intergenic |
| CTGCTTGGAATGGAGCAGAC+TGG | 0.603506 | 4_1:-39861849 | None:intergenic |
| GTAAACCTGATAGAATCCAA+TGG | 0.616739 | 4_1:-39860609 | None:intergenic |
| TGACAAAATATAACTGGACA+AGG | 0.621656 | 4_1:-39862939 | None:intergenic |
| GATGAGATGTTAAAATCATG+AGG | 0.622736 | 4_1:-39859528 | None:intergenic |
| CTAGAACAAGACAAGTCTTG+AGG | 0.626745 | 4_1:-39862430 | None:intergenic |
| GTTAGCATCCGATCCACAAG+AGG | 0.641060 | 4_1:-39861892 | None:intergenic |
| TAGTAGTGACTATCTTATTG+GGG | 0.643043 | 4_1:-39859748 | None:intergenic |
| CATAACATAAAATTAACACA+TGG | 0.656642 | 4_1:-39859609 | None:intergenic |
| GAACAAGACAAGTCTTGAGG+TGG | 0.660929 | 4_1:-39862427 | None:intergenic |
| GAAACGTAGAGCCACATGAA+GGG | 0.662091 | 4_1:-39860483 | None:intergenic |
| ATGCCAACTTGTAAGTGTTG+TGG | 0.665045 | 4_1:-39860441 | None:intergenic |
| GACAAAATATAACTGGACAA+GGG | 0.681720 | 4_1:-39862938 | None:intergenic |
| TGAGTCTAAGAAATCAAACA+AGG | 0.682301 | 4_1:+39862750 | Msa0547110:CDS |
| TTAGCATCCGATCCACAAGA+GGG | 0.706454 | 4_1:-39861891 | None:intergenic |
| AGACTGGTAGAGAAGTTGTG+TGG | 0.708746 | 4_1:-39861833 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAATTCCTATTTATA+AGG | - | chr4_1:39859937-39859956 | None:intergenic | 10.0% |
| !! | ATTAATATATTTATTACTAG+TGG | - | chr4_1:39860650-39860669 | None:intergenic | 10.0% |
| !! | TGTTAAAAAAAAATATGTAT+CGG | - | chr4_1:39862093-39862112 | None:intergenic | 10.0% |
| !! | GAATCTTGAAAAAAATATAT+TGG | + | chr4_1:39860191-39860210 | Msa0547110:five_prime_UTR | 15.0% |
| !!! | TTATTTTTGTCACATTAATT+TGG | + | chr4_1:39860413-39860432 | Msa0547110:intron | 15.0% |
| !! | TATACATAAACACTTAATTT+AGG | + | chr4_1:39861724-39861743 | Msa0547110:intron | 15.0% |
| !! | ATACATAAACACTTAATTTA+GGG | + | chr4_1:39861725-39861744 | Msa0547110:intron | 15.0% |
| !! | CATTACATTAGTATTAATTA+GGG | - | chr4_1:39861986-39862005 | None:intergenic | 15.0% |
| !! | GTTAAAAAAAAATATGTATC+GGG | - | chr4_1:39862092-39862111 | None:intergenic | 15.0% |
| !!! | TTGAATTTAACTTTATGTAT+TGG | - | chr4_1:39862121-39862140 | None:intergenic | 15.0% |
| !!! | TATCTTTGATTATATTTTTC+AGG | + | chr4_1:39862660-39862679 | Msa0547110:intron | 15.0% |
| !! | CATAACATAAAATTAACACA+TGG | - | chr4_1:39859612-39859631 | None:intergenic | 20.0% |
| !! | CTTCTACATCAAAAATAAAA+AGG | + | chr4_1:39859706-39859725 | Msa0547110:five_prime_UTR | 20.0% |
| !!! | TTTTAATTCTCCTTTGTATA+AGG | + | chr4_1:39859831-39859850 | Msa0547110:five_prime_UTR | 20.0% |
| !! | AGCATTTATTCCTTATAAAT+AGG | + | chr4_1:39859924-39859943 | Msa0547110:intron | 20.0% |
| !! | TGAACACAAAAAAAATTGAA+AGG | - | chr4_1:39860104-39860123 | None:intergenic | 20.0% |
| !! | TCTTGAAAAAAATATATTGG+TGG | + | chr4_1:39860194-39860213 | Msa0547110:five_prime_UTR | 20.0% |
| !!! | GTACTTTTCATGATAAAAAA+TGG | + | chr4_1:39860377-39860396 | Msa0547110:intron | 20.0% |
| !! | AATATTAACATGCTAACAAT+AGG | - | chr4_1:39861530-39861549 | None:intergenic | 20.0% |
| !! | CCATTACATTAGTATTAATT+AGG | - | chr4_1:39861987-39862006 | None:intergenic | 20.0% |
| !! | CCTAATTAATACTAATGTAA+TGG | + | chr4_1:39861984-39862003 | Msa0547110:intron | 20.0% |
| !!! | AATTTAACTTTATGTATTGG+TGG | - | chr4_1:39862118-39862137 | None:intergenic | 20.0% |
| !! | AAGATCTTTCATAATATTTG+TGG | + | chr4_1:39862815-39862834 | Msa0547110:three_prime_UTR | 20.0% |
| !!! | AATTTGATTTACACTAAACA+AGG | - | chr4_1:39862866-39862885 | None:intergenic | 20.0% |
| !! | ATGATATGACAAAATATAAC+TGG | - | chr4_1:39862948-39862967 | None:intergenic | 20.0% |
| !!! | ACATGTTACAAAAAAGTGTT+TGG | + | chr4_1:39859458-39859477 | Msa0547110:five_prime_UTR | 25.0% |
| ! | TAGACTATAATGCATCTAAT+TGG | + | chr4_1:39859495-39859514 | Msa0547110:five_prime_UTR | 25.0% |
| !!! | TTCTTCTTTTTTGCTTCAAA+TGG | + | chr4_1:39859635-39859654 | Msa0547110:five_prime_UTR | 25.0% |
| ! | TTCATTGAGTTTATGTTTGT+TGG | - | chr4_1:39859678-39859697 | None:intergenic | 25.0% |
| !! | TCAATTCCTTAATTTGACTT+TGG | + | chr4_1:39859957-39859976 | Msa0547110:intron | 25.0% |
| ! | GGATATGCATAAAATAAGTA+TGG | - | chr4_1:39859989-39860008 | None:intergenic | 25.0% |
| ! | ACTAATTACTCATGGTTTAT+AGG | - | chr4_1:39860010-39860029 | None:intergenic | 25.0% |
| ! | ACAAGTAAACTAATTACTCA+TGG | - | chr4_1:39860018-39860037 | None:intergenic | 25.0% |
| ! | CAAAAATGATAATTACCGAA+TGG | - | chr4_1:39860339-39860358 | None:intergenic | 25.0% |
| ! | AATATTGATACATGCATCAA+AGG | - | chr4_1:39860703-39860722 | None:intergenic | 25.0% |
| !!! | CACTTATTTTCAATATCACT+AGG | - | chr4_1:39861292-39861311 | None:intergenic | 25.0% |
| ! | ATAGAGAGAGTTTAATATTC+CGG | - | chr4_1:39861375-39861394 | None:intergenic | 25.0% |
| ! | GAACATTAAAGGATACAATT+TGG | - | chr4_1:39861501-39861520 | None:intergenic | 25.0% |
| !!! | TAATGTAATGGATAACTAGA+AGG | + | chr4_1:39861996-39862015 | Msa0547110:intron | 25.0% |
| !! | TGTTTTTCCTATTACTAGAA+AGG | - | chr4_1:39862381-39862400 | None:intergenic | 25.0% |
| !!! | ATAAATTCACCACTTTTGAA+TGG | + | chr4_1:39862697-39862716 | Msa0547110:CDS | 25.0% |
| !!! | ATGTTTTTACCATTCAAAAG+TGG | - | chr4_1:39862709-39862728 | None:intergenic | 25.0% |
| !! | ACTTTTGAATGGTAAAAACA+TGG | + | chr4_1:39862708-39862727 | Msa0547110:CDS | 25.0% |
| !!! | GTTATTTTAATGTTCACTCA+GGG | + | chr4_1:39862837-39862856 | Msa0547110:three_prime_UTR | 25.0% |
| !! | AGTTTTACATCATCATTCAA+AGG | - | chr4_1:39863023-39863042 | None:intergenic | 25.0% |
| GATGAGATGTTAAAATCATG+AGG | - | chr4_1:39859531-39859550 | None:intergenic | 30.0% | |
| ACATGGACATTAAGATTTCA+TGG | - | chr4_1:39859595-39859614 | None:intergenic | 30.0% | |
| ! | TGAGTTTATGTTTGTTGGTT+TGG | - | chr4_1:39859673-39859692 | None:intergenic | 30.0% |
| ! | TTATTGGGGAATGCAATTTT+TGG | - | chr4_1:39859737-39859756 | None:intergenic | 30.0% |
| TAGTAGTGACTATCTTATTG+GGG | - | chr4_1:39859751-39859770 | None:intergenic | 30.0% | |
| GTAGTAGTGACTATCTTATT+GGG | - | chr4_1:39859752-39859771 | None:intergenic | 30.0% | |
| AGTAGTAGTGACTATCTTAT+TGG | - | chr4_1:39859753-39859772 | None:intergenic | 30.0% | |
| ACAACACATACCTTATACAA+AGG | - | chr4_1:39859844-39859863 | None:intergenic | 30.0% | |
| TTGCTACCAAAGTCAAATTA+AGG | - | chr4_1:39859966-39859985 | None:intergenic | 30.0% | |
| ! | AAATATATTGGTGGCAAAGA+TGG | + | chr4_1:39860203-39860222 | Msa0547110:exon | 30.0% |
| ! | AATATATTGGTGGCAAAGAT+GGG | + | chr4_1:39860204-39860223 | Msa0547110:exon | 30.0% |
| AGAGATGTCAAAAACTCAAT+TGG | + | chr4_1:39860227-39860246 | Msa0547110:CDS | 30.0% | |
| GAGATGTCAAAAACTCAATT+GGG | + | chr4_1:39860228-39860247 | Msa0547110:CDS | 30.0% | |
| AGATGTCAAAAACTCAATTG+GGG | + | chr4_1:39860229-39860248 | Msa0547110:CDS | 30.0% | |
| AAAACCAAGATTGCTCATTA+AGG | - | chr4_1:39860316-39860335 | None:intergenic | 30.0% | |
| !! | ATGCTTTTTGGCATTCTAAA+TGG | + | chr4_1:39860545-39860564 | Msa0547110:CDS | 30.0% |
| CAAATAAAATCTTGACCCAA+AGG | + | chr4_1:39860976-39860995 | Msa0547110:intron | 30.0% | |
| ATGCATACCAATGTTTCAAT+CGG | - | chr4_1:39861024-39861043 | None:intergenic | 30.0% | |
| ATTGAAAATAAGTGTGACCA+TGG | + | chr4_1:39861298-39861317 | Msa0547110:intron | 30.0% | |
| TCTCTATTCTTCTTACTTGT+TGG | + | chr4_1:39861388-39861407 | Msa0547110:CDS | 30.0% | |
| !! | TTCCAACAAAATTGAGTTGA+AGG | - | chr4_1:39861438-39861457 | None:intergenic | 30.0% |
| ATAGGAAGACAGAACATTAA+AGG | - | chr4_1:39861512-39861531 | None:intergenic | 30.0% | |
| ! | TTTGATGATTTAACTACTCG+TGG | + | chr4_1:39861549-39861568 | Msa0547110:intron | 30.0% |
| TTAGGGCTTGAAAGTTAAAA+AGG | + | chr4_1:39861742-39861761 | Msa0547110:intron | 30.0% | |
| ! | GATGAAAGTCTGAAATACAA+AGG | - | chr4_1:39862318-39862337 | None:intergenic | 30.0% |
| ! | TTTAGCACCTTTCTAGTAAT+AGG | + | chr4_1:39862371-39862390 | Msa0547110:CDS | 30.0% |
| TAATGTTCCTTTCAGTGAAA+GGG | - | chr4_1:39862481-39862500 | None:intergenic | 30.0% | |
| ATAATGTTCCTTTCAGTGAA+AGG | - | chr4_1:39862482-39862501 | None:intergenic | 30.0% | |
| TTCACTGAAAGGAACATTAT+TGG | + | chr4_1:39862482-39862501 | Msa0547110:CDS | 30.0% | |
| GAGAAACTATGTGAGAAAAA+TGG | - | chr4_1:39862617-39862636 | None:intergenic | 30.0% | |
| TAAAAACATGGATGAGGAAA+AGG | + | chr4_1:39862720-39862739 | Msa0547110:CDS | 30.0% | |
| TGAGTCTAAGAAATCAAACA+AGG | + | chr4_1:39862750-39862769 | Msa0547110:CDS | 30.0% | |
| !!! | GGTTATTTTAATGTTCACTC+AGG | + | chr4_1:39862836-39862855 | Msa0547110:three_prime_UTR | 30.0% |
| GACAAAATATAACTGGACAA+GGG | - | chr4_1:39862941-39862960 | None:intergenic | 30.0% | |
| TGACAAAATATAACTGGACA+AGG | - | chr4_1:39862942-39862961 | None:intergenic | 30.0% | |
| TTGGACTTGAGAAGAATTTC+AGG | + | chr4_1:39859791-39859810 | Msa0547110:five_prime_UTR | 35.0% | |
| GATGTCAAAAACTCAATTGG+GGG | + | chr4_1:39860230-39860249 | Msa0547110:CDS | 35.0% | |
| AAAACTCAATTGGGGGTTAT+TGG | + | chr4_1:39860237-39860256 | Msa0547110:CDS | 35.0% | |
| AAAGCCTTAATGAGCAATCT+TGG | + | chr4_1:39860309-39860328 | Msa0547110:CDS | 35.0% | |
| !! | AGCAATCTTGGTTTTCCATT+CGG | + | chr4_1:39860321-39860340 | Msa0547110:CDS | 35.0% |
| ! | ACTTACAAGTTGGCATTTGA+TGG | + | chr4_1:39860448-39860467 | Msa0547110:CDS | 35.0% |
| TCTACGTTTCAATCTGTTTG+AGG | + | chr4_1:39860496-39860515 | Msa0547110:CDS | 35.0% | |
| ! | ATGAAGACTGTCATGCTTTT+TGG | + | chr4_1:39860533-39860552 | Msa0547110:CDS | 35.0% |
| ATTCTAAATGGTGTCTCCAT+TGG | + | chr4_1:39860557-39860576 | Msa0547110:CDS | 35.0% | |
| CAATTCCATTGGATTCTATC+AGG | + | chr4_1:39860604-39860623 | Msa0547110:CDS | 35.0% | |
| GTAAACCTGATAGAATCCAA+TGG | - | chr4_1:39860612-39860631 | None:intergenic | 35.0% | |
| ATTGGCTAAATTGGATGGTT+CGG | - | chr4_1:39860738-39860757 | None:intergenic | 35.0% | |
| GTTCAATTGGCTAAATTGGA+TGG | - | chr4_1:39860743-39860762 | None:intergenic | 35.0% | |
| AAGCAGGCTGCAAAATAATT+GGG | - | chr4_1:39860798-39860817 | None:intergenic | 35.0% | |
| !! | TGCTTGAAACGGATTGAATT+GGG | + | chr4_1:39860813-39860832 | Msa0547110:intron | 35.0% |
| GGATTGAATTGGGGTTAAAT+CGG | + | chr4_1:39860823-39860842 | Msa0547110:intron | 35.0% | |
| TTGTTGATCATCCTGTTCAA+CGG | + | chr4_1:39860936-39860955 | Msa0547110:intron | 35.0% | |
| ATCGAATTGGTGAAACCTTT+GGG | - | chr4_1:39860994-39861013 | None:intergenic | 35.0% | |
| !! | GTTTCTAGCATAACTGTGAA+TGG | - | chr4_1:39861223-39861242 | None:intergenic | 35.0% |
| ! | TTTTCCTAAAGAAGCAGTTC+AGG | + | chr4_1:39861245-39861264 | Msa0547110:intron | 35.0% |
| TAAGCAATTTAGCATGACCA+TGG | - | chr4_1:39861318-39861337 | None:intergenic | 35.0% | |
| ! | ATTTTACTACTATGTGCAGC+CGG | + | chr4_1:39861353-39861372 | Msa0547110:intron | 35.0% |
| ! | TTCTTCTTACTTGTTGGAGT+TGG | + | chr4_1:39861394-39861413 | Msa0547110:CDS | 35.0% |
| ! | GACCTTCAACTCAATTTTGT+TGG | + | chr4_1:39861433-39861452 | Msa0547110:CDS | 35.0% |
| GATAGCTAGAAGTGAAAGAA+TGG | - | chr4_1:39861461-39861480 | None:intergenic | 35.0% | |
| GCTATCATAACAACATGTGT+TGG | + | chr4_1:39861475-39861494 | Msa0547110:CDS | 35.0% | |
| AAACAAAGAGAATTGCTGCT+TGG | - | chr4_1:39861867-39861886 | None:intergenic | 35.0% | |
| ! | GTATGCAAAGACATTTTGCT+TGG | - | chr4_1:39861917-39861936 | None:intergenic | 35.0% |
| CAAATATTCTCCTCTTGTCT+TGG | + | chr4_1:39861936-39861955 | Msa0547110:CDS | 35.0% | |
| ACATTACTTACCAAGACAAG+AGG | - | chr4_1:39861949-39861968 | None:intergenic | 35.0% | |
| TCCAGTAACATATCAAGTGT+TGG | + | chr4_1:39862403-39862422 | Msa0547110:CDS | 35.0% | |
| CCAGTAACATATCAAGTGTT+GGG | + | chr4_1:39862404-39862423 | Msa0547110:CDS | 35.0% | |
| !! | ACTTGTCTTGTTCTAGGATT+TGG | + | chr4_1:39862437-39862456 | Msa0547110:CDS | 35.0% |
| ! | GGAATACTAGTAGCAGTTTT+TGG | + | chr4_1:39862503-39862522 | Msa0547110:CDS | 35.0% |
| !! | ACTAGTAGCAGTTTTTGGAA+TGG | + | chr4_1:39862508-39862527 | Msa0547110:CDS | 35.0% |
| !!! | CTAGTAGCAGTTTTTGGAAT+GGG | + | chr4_1:39862509-39862528 | Msa0547110:CDS | 35.0% |
| AAAATTACCTGAGACGACAA+AGG | - | chr4_1:39862590-39862609 | None:intergenic | 35.0% | |
| GAATGGTAAAAACATGGATG+AGG | + | chr4_1:39862714-39862733 | Msa0547110:CDS | 35.0% | |
| CATTGACACATGATGTTGTT+TGG | - | chr4_1:39862998-39863017 | None:intergenic | 35.0% | |
| TCTTCTCTCTTTCTCTCTCT+TGG | + | chr4_1:39859772-39859791 | Msa0547110:five_prime_UTR | 40.0% | |
| GCATGTCTTTATGTTCCACT+TGG | + | chr4_1:39859890-39859909 | Msa0547110:intron | 40.0% | |
| TGCTACTAGTACTAACCAAG+TGG | - | chr4_1:39859908-39859927 | None:intergenic | 40.0% | |
| !! | GGCTTTGTTGCATATGACAA+TGG | - | chr4_1:39860295-39860314 | None:intergenic | 40.0% |
| ! | ATGCCAACTTGTAAGTGTTG+TGG | - | chr4_1:39860444-39860463 | None:intergenic | 40.0% |
| !! | TACTTTTTGCACCCTTCATG+TGG | + | chr4_1:39860472-39860491 | Msa0547110:CDS | 40.0% |
| AGTCTTCATGTCAACAGGTT+TGG | - | chr4_1:39860522-39860541 | None:intergenic | 40.0% | |
| ATGACAGTCTTCATGTCAAC+AGG | - | chr4_1:39860527-39860546 | None:intergenic | 40.0% | |
| !! | GCTCAAGTTGAGAAATCCAA+TGG | - | chr4_1:39860576-39860595 | None:intergenic | 40.0% |
| ATCCAATGGAATTGAAGCCA+AGG | - | chr4_1:39860598-39860617 | None:intergenic | 40.0% | |
| CTCGGTTCAATTGGCTAAAT+TGG | - | chr4_1:39860747-39860766 | None:intergenic | 40.0% | |
| TAGCCAATTGAACCGAGAAT+CGG | + | chr4_1:39860750-39860769 | Msa0547110:intron | 40.0% | |
| ! | TAACCGATTCTCGGTTCAAT+TGG | - | chr4_1:39860756-39860775 | None:intergenic | 40.0% |
| CAAGCAGGCTGCAAAATAAT+TGG | - | chr4_1:39860799-39860818 | None:intergenic | 40.0% | |
| ! | ATTTTGCAGCCTGCTTGAAA+CGG | + | chr4_1:39860802-39860821 | Msa0547110:intron | 40.0% |
| CAATTCAATCCGTTTCAAGC+AGG | - | chr4_1:39860814-39860833 | None:intergenic | 40.0% | |
| !! | CTGCTTGAAACGGATTGAAT+TGG | + | chr4_1:39860812-39860831 | Msa0547110:intron | 40.0% |
| !! | GCTTGAAACGGATTGAATTG+GGG | + | chr4_1:39860814-39860833 | Msa0547110:intron | 40.0% |
| GAATTGGGGTTAAATCGGTT+TGG | + | chr4_1:39860828-39860847 | Msa0547110:intron | 40.0% | |
| GATCGAATTGGTGAAACCTT+TGG | - | chr4_1:39860995-39861014 | None:intergenic | 40.0% | |
| GGTTTCACCAATTCGATCTT+CGG | + | chr4_1:39860997-39861016 | Msa0547110:intron | 40.0% | |
| GTTACCTGAACTGCTTCTTT+AGG | - | chr4_1:39861252-39861271 | None:intergenic | 40.0% | |
| AAACTGTTTGCGAGAGCTTA+TGG | + | chr4_1:39861612-39861631 | Msa0547110:intron | 40.0% | |
| AAGTTATCCGAGAGAGCTTA+TGG | - | chr4_1:39861656-39861675 | None:intergenic | 40.0% | |
| ! | AAGAGAATTGCTGCTTGGAA+TGG | - | chr4_1:39861862-39861881 | None:intergenic | 40.0% |
| ! | GCAGCAATTCTCTTTGTTTC+AGG | + | chr4_1:39861868-39861887 | Msa0547110:CDS | 40.0% |
| CCCAACACTTGATATGTTAC+TGG | - | chr4_1:39862407-39862426 | None:intergenic | 40.0% | |
| CTAGAACAAGACAAGTCTTG+AGG | - | chr4_1:39862433-39862452 | None:intergenic | 40.0% | |
| ! | CTCAAGACTTGTCTTGTTCT+AGG | + | chr4_1:39862431-39862450 | Msa0547110:CDS | 40.0% |
| GTTCTCTTGAGTGCAGAAAT+AGG | - | chr4_1:39862543-39862562 | None:intergenic | 40.0% | |
| !!! | GGGGAATGCAATTTTTGGTG+TGG | - | chr4_1:39859732-39859751 | None:intergenic | 45.0% |
| CATAAAGACATGCTGCATGC+AGG | - | chr4_1:39859883-39859902 | None:intergenic | 45.0% | |
| TGGTGCACTATTCCTTTCTG+TGG | + | chr4_1:39860257-39860276 | Msa0547110:CDS | 45.0% | |
| AGACAGAAGAAGCCACAGAA+AGG | - | chr4_1:39860272-39860291 | None:intergenic | 45.0% | |
| ! | CAACTTGTAAGTGTTGTGGC+TGG | - | chr4_1:39860440-39860459 | None:intergenic | 45.0% |
| CAGCCACAACACTTACAAGT+TGG | + | chr4_1:39860438-39860457 | Msa0547110:intron | 45.0% | |
| GAAACGTAGAGCCACATGAA+GGG | - | chr4_1:39860486-39860505 | None:intergenic | 45.0% | |
| TGAAACGTAGAGCCACATGA+AGG | - | chr4_1:39860487-39860506 | None:intergenic | 45.0% | |
| GGATTTCTCAACTTGAGCCT+TGG | + | chr4_1:39860578-39860597 | Msa0547110:CDS | 45.0% | |
| AGCCTTGGCTTCAATTCCAT+TGG | + | chr4_1:39860593-39860612 | Msa0547110:CDS | 45.0% | |
| TGAACCGAGAATCGGTTAGT+TGG | + | chr4_1:39860758-39860777 | Msa0547110:intron | 45.0% | |
| ! | CTGACCAACTAACCGATTCT+CGG | - | chr4_1:39860765-39860784 | None:intergenic | 45.0% |
| ! | GAATCGGTTAGTTGGTCAGT+TGG | + | chr4_1:39860766-39860785 | Msa0547110:intron | 45.0% |
| !! | GGGTTAAATCGGTTTGGTTG+CGG | + | chr4_1:39860834-39860853 | Msa0547110:intron | 45.0% |
| TTGGTTGCGGTAGATTCAAC+TGG | + | chr4_1:39860847-39860866 | Msa0547110:intron | 45.0% | |
| TTGATCATCCTGTTCAACGG+TGG | + | chr4_1:39860939-39860958 | Msa0547110:intron | 45.0% | |
| CAGTTTAACCACCGTTGAAC+AGG | - | chr4_1:39860950-39860969 | None:intergenic | 45.0% | |
| AATCGGACCGAAGATCGAAT+TGG | - | chr4_1:39861007-39861026 | None:intergenic | 45.0% | |
| CTTCGGTCCGATTGAAACAT+TGG | + | chr4_1:39861014-39861033 | Msa0547110:intron | 45.0% | |
| GACAAGTCCATAAGCTCTCT+CGG | + | chr4_1:39861646-39861665 | Msa0547110:intron | 45.0% | |
| AGACTGGTAGAGAAGTTGTG+TGG | - | chr4_1:39861836-39861855 | None:intergenic | 45.0% | |
| TTAGCATCCGATCCACAAGA+GGG | - | chr4_1:39861894-39861913 | None:intergenic | 45.0% | |
| ! | GTCGTGTTAGTTTCAGACAC+TGG | - | chr4_1:39862070-39862089 | None:intergenic | 45.0% |
| GAACAAGACAAGTCTTGAGG+TGG | - | chr4_1:39862430-39862449 | None:intergenic | 45.0% | |
| TCCATGACCCTTTCACTGAA+AGG | + | chr4_1:39862471-39862490 | Msa0547110:CDS | 45.0% | |
| TCCTTTCAGTGAAAGGGTCA+TGG | - | chr4_1:39862475-39862494 | None:intergenic | 45.0% | |
| ATTACCTGAGACGACAAAGG+AGG | - | chr4_1:39862587-39862606 | None:intergenic | 45.0% | |
| !! | AGTAATAAATATATTAATTA+TGG | + | chr4_1:39860652-39860671 | Msa0547110:intron | 5.0% |
| !! | AAAAAAATGTTAAAAATATT+TGG | + | chr4_1:39860676-39860695 | Msa0547110:intron | 5.0% |
| !!! | TAAAAAGATATATTTAAAAT+AGG | - | chr4_1:39860909-39860928 | None:intergenic | 5.0% |
| ! | CTTTGTTTCAGGCCCTCTTG+TGG | + | chr4_1:39861879-39861898 | Msa0547110:CDS | 50.0% |
| TTTCAGGCCCTCTTGTGGAT+CGG | + | chr4_1:39861884-39861903 | Msa0547110:CDS | 50.0% | |
| GTTAGCATCCGATCCACAAG+AGG | - | chr4_1:39861895-39861914 | None:intergenic | 50.0% | |
| CTGCTTGGAATGGAGCAGAC+TGG | - | chr4_1:39861852-39861871 | None:intergenic | 55.0% | |
| CGATCCTCCTTTGTCGTCTC+AGG | + | chr4_1:39862580-39862599 | Msa0547110:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 39859434 | 39863071 | 39859434 | ID=Msa0547110;Name=Msa0547110 |
| chr4_1 | mRNA | 39859434 | 39863071 | 39859434 | ID=Msa0547110-mRNA-1;Parent=Msa0547110;Name=Msa0547110-mRNA-1;_AED=0.15;_eAED=0.15;_QI=452|0.57|0.62|1|0.28|0.25|8|285|313 |
| chr4_1 | exon | 39859434 | 39859852 | 39859434 | ID=Msa0547110-mRNA-1:exon:10156;Parent=Msa0547110-mRNA-1 |
| chr4_1 | exon | 39860189 | 39860342 | 39860189 | ID=Msa0547110-mRNA-1:exon:10157;Parent=Msa0547110-mRNA-1 |
| chr4_1 | exon | 39860441 | 39860625 | 39860441 | ID=Msa0547110-mRNA-1:exon:10158;Parent=Msa0547110-mRNA-1 |
| chr4_1 | exon | 39861259 | 39861266 | 39861259 | ID=Msa0547110-mRNA-1:exon:10159;Parent=Msa0547110-mRNA-1 |
| chr4_1 | exon | 39861372 | 39861504 | 39861372 | ID=Msa0547110-mRNA-1:exon:10160;Parent=Msa0547110-mRNA-1 |
| chr4_1 | exon | 39861814 | 39861957 | 39861814 | ID=Msa0547110-mRNA-1:exon:10161;Parent=Msa0547110-mRNA-1 |
| chr4_1 | exon | 39862329 | 39862574 | 39862329 | ID=Msa0547110-mRNA-1:exon:10162;Parent=Msa0547110-mRNA-1 |
| chr4_1 | exon | 39862682 | 39863071 | 39862682 | ID=Msa0547110-mRNA-1:exon:10163;Parent=Msa0547110-mRNA-1 |
| chr4_1 | five_prime_UTR | 39859434 | 39859852 | 39859434 | ID=Msa0547110-mRNA-1:five_prime_utr;Parent=Msa0547110-mRNA-1 |
| chr4_1 | five_prime_UTR | 39860189 | 39860221 | 39860189 | ID=Msa0547110-mRNA-1:five_prime_utr;Parent=Msa0547110-mRNA-1 |
| chr4_1 | CDS | 39860222 | 39860342 | 39860222 | ID=Msa0547110-mRNA-1:cds;Parent=Msa0547110-mRNA-1 |
| chr4_1 | CDS | 39860441 | 39860625 | 39860441 | ID=Msa0547110-mRNA-1:cds;Parent=Msa0547110-mRNA-1 |
| chr4_1 | CDS | 39861259 | 39861266 | 39861259 | ID=Msa0547110-mRNA-1:cds;Parent=Msa0547110-mRNA-1 |
| chr4_1 | CDS | 39861372 | 39861504 | 39861372 | ID=Msa0547110-mRNA-1:cds;Parent=Msa0547110-mRNA-1 |
| chr4_1 | CDS | 39861814 | 39861957 | 39861814 | ID=Msa0547110-mRNA-1:cds;Parent=Msa0547110-mRNA-1 |
| chr4_1 | CDS | 39862329 | 39862574 | 39862329 | ID=Msa0547110-mRNA-1:cds;Parent=Msa0547110-mRNA-1 |
| chr4_1 | CDS | 39862682 | 39862786 | 39862682 | ID=Msa0547110-mRNA-1:cds;Parent=Msa0547110-mRNA-1 |
| chr4_1 | three_prime_UTR | 39862787 | 39863071 | 39862787 | ID=Msa0547110-mRNA-1:three_prime_utr;Parent=Msa0547110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
