Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1340700 | XP_003594882.2 | 99.234 | 1044 | 8 | 0 | 1 | 1044 | 1 | 1044 | 0.0 | 2161 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1340700 | sp|Q84JA6|CESA4_ARATH | 76.880 | 1064 | 211 | 8 | 1 | 1044 | 1 | 1049 | 0.0 | 1665 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1340700 | G7INF0 | 99.234 | 1044 | 8 | 0 | 1 | 1044 | 1 | 1044 | 0.0 | 2161 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0040660 | Msa1340700 | 0.850933 | 1.232538e-60 | -8.615850e-47 |
Msa0071860 | Msa1340700 | 0.804101 | 2.539220e-49 | -8.615850e-47 |
Msa0081250 | Msa1340700 | 0.815068 | 1.117211e-51 | -8.615850e-47 |
Msa0629600 | Msa1340700 | 0.869301 | 3.430895e-66 | -8.615850e-47 |
Msa0642950 | Msa1340700 | 0.876075 | 1.862997e-68 | -8.615850e-47 |
Msa0667370 | Msa1340700 | 0.873418 | 1.493185e-67 | -8.615850e-47 |
Msa0688820 | Msa1340700 | 0.849520 | 3.067612e-60 | -8.615850e-47 |
Msa0783980 | Msa1340700 | 0.822854 | 1.895851e-53 | -8.615850e-47 |
Msa0818710 | Msa1340700 | 0.844858 | 5.828026e-59 | -8.615850e-47 |
Msa0173780 | Msa1340700 | 0.808277 | 3.352023e-50 | -8.615850e-47 |
Msa0184680 | Msa1340700 | 0.804408 | 2.191913e-49 | -8.615850e-47 |
Msa0193850 | Msa1340700 | 0.909993 | 3.077808e-82 | -8.615850e-47 |
Msa0199960 | Msa1340700 | 0.896737 | 2.767217e-76 | -8.615850e-47 |
Msa0211030 | Msa1340700 | 0.804863 | 1.761390e-49 | -8.615850e-47 |
Msa0227950 | Msa1340700 | 0.812858 | 3.431170e-51 | -8.615850e-47 |
Msa0235710 | Msa1340700 | 0.877284 | 7.111978e-69 | -8.615850e-47 |
Msa1227990 | Msa1340700 | 0.802476 | 5.509489e-49 | -8.615850e-47 |
Msa1264570 | Msa1340700 | 0.904917 | 7.428564e-80 | -8.615850e-47 |
Msa1327650 | Msa1340700 | 0.847795 | 9.226691e-60 | -8.615850e-47 |
Msa1340700 | Msa1412710 | 0.816229 | 6.158168e-52 | -8.615850e-47 |
Msa1340700 | Msa1426070 | 0.861020 | 1.375655e-63 | -8.615850e-47 |
Msa1340700 | Msa1430750 | 0.883685 | 3.638533e-71 | -8.615850e-47 |
Msa1340700 | Msa1436420 | 0.925662 | 1.354184e-90 | -8.615850e-47 |
Msa1340700 | Msa1444190 | 0.800661 | 1.298132e-48 | -8.615850e-47 |
Msa1340700 | Msa1445050 | 0.856079 | 4.098485e-62 | -8.615850e-47 |
Msa1340700 | Msa1446110 | 0.838871 | 2.222637e-57 | -8.615850e-47 |
Msa0389500 | Msa1340700 | 0.854455 | 1.217313e-61 | -8.615850e-47 |
Msa0392380 | Msa1340700 | 0.831601 | 1.521542e-55 | -8.615850e-47 |
Msa0440320 | Msa1340700 | 0.824957 | 6.089380e-54 | -8.615850e-47 |
Msa1037550 | Msa1340700 | 0.845951 | 2.947315e-59 | -8.615850e-47 |
Msa1063500 | Msa1340700 | 0.810846 | 9.410005e-51 | -8.615850e-47 |
Msa1078930 | Msa1340700 | 0.857833 | 1.246985e-62 | -8.615850e-47 |
Msa1106500 | Msa1340700 | 0.818214 | 2.202919e-52 | -8.615850e-47 |
Msa0242490 | Msa1340700 | 0.898473 | 5.129192e-77 | -8.615850e-47 |
Msa0243600 | Msa1340700 | 0.915843 | 3.633469e-85 | -8.615850e-47 |
Msa0274440 | Msa1340700 | 0.869954 | 2.102145e-66 | -8.615850e-47 |
Msa0280690 | Msa1340700 | 0.890826 | 6.932106e-74 | -8.615850e-47 |
Msa0282220 | Msa1340700 | 0.925933 | 9.366025e-91 | -8.615850e-47 |
Msa0300210 | Msa1340700 | 0.812493 | 4.124784e-51 | -8.615850e-47 |
Msa0314170 | Msa1340700 | 0.922001 | 1.733562e-88 | -8.615850e-47 |
Msa0319940 | Msa1340700 | 0.888783 | 4.344575e-73 | -8.615850e-47 |
Msa0333070 | Msa1340700 | 0.810751 | 9.864568e-51 | -8.615850e-47 |
Msa1123930 | Msa1340700 | 0.870458 | 1.437296e-66 | -8.615850e-47 |
Msa1130430 | Msa1340700 | 0.844977 | 5.411569e-59 | -8.615850e-47 |
Msa1131290 | Msa1340700 | 0.828677 | 7.869536e-55 | -8.615850e-47 |
Msa1169230 | Msa1340700 | 0.842334 | 2.755481e-58 | -8.615850e-47 |
Msa1170830 | Msa1340700 | 0.815194 | 1.047668e-51 | -8.615850e-47 |
Msa1222590 | Msa1340700 | 0.887158 | 1.824630e-72 | -8.615850e-47 |
Msa0487500 | Msa1340700 | 0.827323 | 1.667042e-54 | -8.615850e-47 |
Msa0514170 | Msa1340700 | 0.808809 | 2.581098e-50 | -8.615850e-47 |
Msa0546800 | Msa1340700 | 0.829142 | 6.075046e-55 | -8.615850e-47 |
Msa0547110 | Msa1340700 | 0.813307 | 2.734956e-51 | -8.615850e-47 |
Msa0968350 | Msa1340700 | 0.861737 | 8.314487e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1340700 | MtrunA17_Chr2g0296991 | 99.234 | 1044 | 8 | 0 | 1 | 1044 | 1 | 1044 | 0.0 | 2161 |
Msa1340700 | MtrunA17_Chr3g0088821 | 63.745 | 1084 | 309 | 9 | 28 | 1044 | 12 | 1078 | 0.0 | 1414 |
Msa1340700 | MtrunA17_Chr4g0073711 | 65.084 | 1074 | 299 | 12 | 7 | 1044 | 5 | 1038 | 0.0 | 1409 |
Msa1340700 | MtrunA17_Chr1g0201731 | 61.725 | 1113 | 338 | 13 | 1 | 1044 | 3 | 1096 | 0.0 | 1386 |
Msa1340700 | MtrunA17_Chr8g0352231 | 63.192 | 1084 | 315 | 9 | 28 | 1044 | 12 | 1078 | 0.0 | 1384 |
Msa1340700 | MtrunA17_Chr1g0183381 | 71.690 | 929 | 201 | 8 | 119 | 1044 | 35 | 904 | 0.0 | 1365 |
Msa1340700 | MtrunA17_Chr2g0284211 | 65.260 | 1019 | 295 | 13 | 31 | 1039 | 3 | 972 | 0.0 | 1341 |
Msa1340700 | MtrunA17_Chr8g0383701 | 69.653 | 893 | 246 | 4 | 161 | 1044 | 219 | 1095 | 0.0 | 1335 |
Msa1340700 | MtrunA17_Chr8g0383701 | 71.429 | 63 | 18 | 0 | 33 | 95 | 35 | 97 | 9.62e-23 | 105 |
Msa1340700 | MtrunA17_Chr8g0379241 | 63.178 | 1032 | 317 | 12 | 32 | 1044 | 4 | 991 | 0.0 | 1324 |
Msa1340700 | MtrunA17_Chr3g0137951 | 69.299 | 899 | 237 | 11 | 163 | 1044 | 211 | 1087 | 0.0 | 1296 |
Msa1340700 | MtrunA17_Chr3g0137951 | 45.161 | 93 | 46 | 1 | 7 | 94 | 5 | 97 | 4.39e-23 | 106 |
Msa1340700 | MtrunA17_Chr3g0078671 | 57.934 | 1065 | 405 | 8 | 5 | 1044 | 3 | 1049 | 0.0 | 1259 |
Msa1340700 | MtrunA17_Chr7g0267731 | 65.028 | 895 | 280 | 6 | 163 | 1044 | 112 | 986 | 0.0 | 1204 |
Msa1340700 | MtrunA17_Chr8g0364641 | 54.771 | 1048 | 393 | 14 | 7 | 1044 | 5 | 981 | 0.0 | 1175 |
Msa1340700 | MtrunA17_Chr4g0039801 | 47.883 | 921 | 354 | 17 | 187 | 1027 | 254 | 1128 | 0.0 | 841 |
Msa1340700 | MtrunA17_Chr5g0410641 | 42.134 | 1087 | 477 | 21 | 23 | 1027 | 91 | 1107 | 0.0 | 835 |
Msa1340700 | MtrunA17_Chr1g0165411 | 42.444 | 1072 | 464 | 27 | 27 | 1033 | 110 | 1093 | 0.0 | 801 |
Msa1340700 | MtrunA17_Chr1g0165421 | 42.222 | 1080 | 479 | 25 | 20 | 1027 | 111 | 1117 | 0.0 | 799 |
Msa1340700 | MtrunA17_Chr7g0269741 | 46.703 | 910 | 355 | 15 | 202 | 1027 | 293 | 1156 | 0.0 | 798 |
Msa1340700 | MtrunA17_Chr2g0297351 | 45.788 | 926 | 368 | 18 | 186 | 1027 | 135 | 1010 | 0.0 | 785 |
Msa1340700 | MtrunA17_Chr7g0274751 | 41.348 | 890 | 305 | 21 | 187 | 1027 | 77 | 798 | 0.0 | 608 |
Msa1340700 | MtrunA17_Chr4g0025201 | 32.982 | 758 | 402 | 14 | 251 | 997 | 49 | 711 | 1.53e-118 | 381 |
Msa1340700 | MtrunA17_Chr2g0322361 | 31.760 | 784 | 424 | 20 | 251 | 1018 | 52 | 740 | 7.88e-109 | 356 |
Msa1340700 | MtrunA17_Chr2g0322341 | 44.590 | 305 | 156 | 4 | 252 | 556 | 52 | 343 | 3.86e-81 | 268 |
Msa1340700 | MtrunA17_Chr2g0322371 | 43.314 | 344 | 175 | 6 | 251 | 593 | 47 | 371 | 4.32e-80 | 277 |
Msa1340700 | MtrunA17_Chr2g0322371 | 29.008 | 393 | 251 | 10 | 644 | 1024 | 356 | 732 | 7.17e-40 | 159 |
Msa1340700 | MtrunA17_Chr3g0102541 | 40.171 | 351 | 196 | 6 | 243 | 590 | 44 | 383 | 2.07e-79 | 275 |
Msa1340700 | MtrunA17_Chr3g0102541 | 35.714 | 224 | 137 | 3 | 708 | 928 | 409 | 628 | 4.63e-36 | 147 |
Msa1340700 | MtrunA17_Chr3g0102531 | 38.503 | 374 | 214 | 8 | 221 | 590 | 21 | 382 | 3.23e-79 | 274 |
Msa1340700 | MtrunA17_Chr3g0102531 | 36.161 | 224 | 136 | 3 | 708 | 928 | 408 | 627 | 6.22e-36 | 146 |
Msa1340700 | MtrunA17_Chr3g0102551 | 37.240 | 384 | 214 | 9 | 221 | 590 | 23 | 393 | 2.97e-78 | 272 |
Msa1340700 | MtrunA17_Chr3g0102551 | 31.596 | 307 | 192 | 9 | 722 | 1015 | 428 | 729 | 1.10e-35 | 145 |
Msa1340700 | MtrunA17_Chr1g0186381 | 37.000 | 400 | 219 | 8 | 200 | 590 | 4 | 379 | 1.80e-73 | 258 |
Msa1340700 | MtrunA17_Chr1g0186381 | 26.124 | 356 | 238 | 8 | 683 | 1021 | 390 | 737 | 8.27e-36 | 146 |
Msa1340700 | MtrunA17_Chr2g0322351 | 41.226 | 359 | 189 | 8 | 238 | 593 | 37 | 376 | 2.12e-72 | 255 |
Msa1340700 | MtrunA17_Chr2g0322351 | 31.871 | 342 | 217 | 8 | 684 | 1018 | 395 | 727 | 6.14e-44 | 171 |
Msa1340700 | MtrunA17_Chr4g0046401 | 36.702 | 376 | 211 | 8 | 222 | 590 | 24 | 379 | 4.44e-71 | 251 |
Msa1340700 | MtrunA17_Chr4g0046401 | 31.899 | 395 | 251 | 10 | 631 | 1018 | 347 | 730 | 4.61e-45 | 174 |
Msa1340700 | MtrunA17_Chr3g0095791 | 34.865 | 370 | 204 | 7 | 221 | 588 | 18 | 352 | 2.42e-67 | 240 |
Msa1340700 | MtrunA17_Chr3g0095791 | 27.829 | 327 | 225 | 5 | 684 | 1003 | 368 | 690 | 1.52e-35 | 145 |
Msa1340700 | MtrunA17_Chr2g0307191 | 33.598 | 378 | 207 | 7 | 222 | 593 | 19 | 358 | 1.27e-63 | 229 |
Msa1340700 | MtrunA17_Chr2g0307191 | 26.300 | 327 | 224 | 6 | 687 | 1003 | 372 | 691 | 2.62e-32 | 134 |
Msa1340700 | MtrunA17_Chr2g0298581 | 34.409 | 372 | 212 | 7 | 222 | 593 | 19 | 358 | 1.57e-63 | 229 |
Msa1340700 | MtrunA17_Chr2g0298581 | 28.221 | 326 | 223 | 5 | 684 | 1002 | 369 | 690 | 1.19e-35 | 145 |
Msa1340700 | MtrunA17_Chr3g0077511 | 33.515 | 367 | 212 | 5 | 222 | 588 | 19 | 353 | 1.51e-62 | 226 |
Msa1340700 | MtrunA17_Chr3g0077511 | 26.190 | 336 | 232 | 8 | 677 | 1003 | 365 | 693 | 2.40e-32 | 135 |
Msa1340700 | MtrunA17_Chr2g0322331 | 31.165 | 369 | 239 | 7 | 660 | 1018 | 8 | 371 | 9.64e-51 | 184 |
Msa1340700 | MtrunA17_Chr0c03g0490021 | 68.033 | 122 | 38 | 1 | 875 | 995 | 1 | 122 | 2.60e-47 | 165 |
Msa1340700 | MtrunA17_Chr3g0126641 | 39.592 | 245 | 88 | 8 | 532 | 756 | 6 | 210 | 9.24e-42 | 152 |
Msa1340700 | MtrunA17_Chr7g0252781 | 64.706 | 85 | 27 | 2 | 962 | 1044 | 6 | 89 | 9.08e-31 | 116 |
Msa1340700 | MtrunA17_Chr8g0355061 | 81.481 | 54 | 10 | 0 | 875 | 928 | 1 | 54 | 1.18e-26 | 103 |
Msa1340700 | MtrunA17_Chr2g0307241 | 35.000 | 160 | 95 | 3 | 222 | 381 | 19 | 169 | 1.44e-26 | 108 |
Msa1340700 | MtrunA17_Chr3g0094861 | 47.423 | 97 | 46 | 1 | 6 | 97 | 1 | 97 | 9.68e-24 | 103 |
Msa1340700 | MtrunA17_Chr7g0267741 | 59.322 | 59 | 24 | 0 | 33 | 91 | 5 | 63 | 2.00e-22 | 91.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1340700 | AT5G44030.1 | 76.880 | 1064 | 211 | 8 | 1 | 1044 | 1 | 1049 | 0.0 | 1665 |
Msa1340700 | AT5G44030.2 | 75.206 | 1093 | 207 | 9 | 1 | 1044 | 1 | 1078 | 0.0 | 1656 |
Msa1340700 | AT5G05170.1 | 64.958 | 1073 | 302 | 11 | 28 | 1044 | 11 | 1065 | 0.0 | 1425 |
Msa1340700 | AT5G09870.1 | 62.799 | 1086 | 340 | 9 | 4 | 1044 | 2 | 1068 | 0.0 | 1412 |
Msa1340700 | AT5G17420.1 | 65.449 | 1068 | 293 | 14 | 7 | 1044 | 5 | 1026 | 0.0 | 1406 |
Msa1340700 | AT5G64740.1 | 62.113 | 1098 | 343 | 12 | 4 | 1044 | 2 | 1083 | 0.0 | 1399 |
Msa1340700 | AT2G21770.1 | 61.650 | 1103 | 343 | 12 | 4 | 1044 | 2 | 1086 | 0.0 | 1395 |
Msa1340700 | AT4G32410.1 | 62.407 | 1080 | 330 | 13 | 7 | 1029 | 5 | 1065 | 0.0 | 1385 |
Msa1340700 | AT4G39350.1 | 61.783 | 1099 | 344 | 14 | 4 | 1044 | 2 | 1082 | 0.0 | 1357 |
Msa1340700 | AT2G25540.1 | 61.090 | 1064 | 352 | 12 | 9 | 1029 | 1 | 1045 | 0.0 | 1353 |
Msa1340700 | AT4G18780.1 | 65.396 | 1023 | 277 | 13 | 31 | 1031 | 3 | 970 | 0.0 | 1345 |
Msa1340700 | AT5G44030.3 | 82.987 | 770 | 119 | 2 | 287 | 1044 | 1 | 770 | 0.0 | 1330 |
Msa1340700 | AT5G16910.1 | 43.945 | 1090 | 498 | 25 | 3 | 1027 | 90 | 1131 | 0.0 | 845 |
Msa1340700 | AT3G03050.1 | 43.704 | 1080 | 451 | 24 | 31 | 1027 | 126 | 1131 | 0.0 | 841 |
Msa1340700 | AT1G02730.1 | 46.732 | 918 | 360 | 18 | 202 | 1032 | 298 | 1173 | 0.0 | 796 |
Msa1340700 | AT2G33100.2 | 46.718 | 914 | 383 | 17 | 184 | 1027 | 145 | 1024 | 0.0 | 794 |
Msa1340700 | AT2G33100.1 | 46.718 | 914 | 383 | 17 | 184 | 1027 | 145 | 1024 | 0.0 | 794 |
Msa1340700 | AT1G32180.1 | 47.201 | 911 | 364 | 17 | 194 | 1025 | 94 | 966 | 0.0 | 791 |
Msa1340700 | AT1G32180.2 | 47.201 | 911 | 364 | 17 | 194 | 1025 | 94 | 966 | 0.0 | 791 |
Msa1340700 | AT4G38190.1 | 43.546 | 643 | 259 | 18 | 20 | 598 | 99 | 701 | 9.99e-151 | 478 |
Msa1340700 | AT4G38190.1 | 50.459 | 327 | 157 | 3 | 704 | 1027 | 768 | 1092 | 1.89e-107 | 361 |
Msa1340700 | AT1G55850.1 | 38.571 | 420 | 218 | 9 | 182 | 590 | 1 | 391 | 1.40e-79 | 276 |
Msa1340700 | AT1G55850.1 | 31.392 | 309 | 188 | 7 | 722 | 1015 | 420 | 719 | 5.79e-37 | 150 |
Msa1340700 | AT2G32530.1 | 40.701 | 371 | 192 | 9 | 226 | 590 | 24 | 372 | 4.86e-77 | 269 |
Msa1340700 | AT2G32530.1 | 28.732 | 355 | 217 | 6 | 670 | 999 | 385 | 728 | 6.85e-35 | 144 |
Msa1340700 | AT4G15320.3 | 41.129 | 372 | 194 | 8 | 222 | 590 | 23 | 372 | 6.58e-77 | 269 |
Msa1340700 | AT4G15320.3 | 27.628 | 409 | 245 | 12 | 626 | 996 | 334 | 729 | 1.50e-29 | 127 |
Msa1340700 | AT4G15320.5 | 41.129 | 372 | 194 | 8 | 222 | 590 | 23 | 372 | 8.44e-77 | 268 |
Msa1340700 | AT4G15320.5 | 27.628 | 409 | 245 | 12 | 626 | 996 | 334 | 729 | 1.32e-29 | 127 |
Msa1340700 | AT4G15320.2 | 29.654 | 752 | 418 | 22 | 206 | 932 | 10 | 675 | 1.04e-76 | 269 |
Msa1340700 | AT2G32620.2 | 41.787 | 347 | 178 | 7 | 250 | 593 | 50 | 375 | 1.40e-75 | 259 |
Msa1340700 | AT2G32620.2 | 35.484 | 124 | 79 | 1 | 677 | 799 | 392 | 515 | 1.03e-17 | 88.6 |
Msa1340700 | AT2G32540.1 | 40.936 | 342 | 182 | 6 | 250 | 590 | 50 | 372 | 8.90e-75 | 263 |
Msa1340700 | AT2G32540.1 | 26.757 | 370 | 238 | 7 | 678 | 1023 | 393 | 753 | 4.81e-35 | 144 |
Msa1340700 | AT2G32620.3 | 41.787 | 347 | 178 | 7 | 250 | 593 | 50 | 375 | 1.17e-74 | 259 |
Msa1340700 | AT2G32620.3 | 33.333 | 216 | 128 | 5 | 677 | 885 | 392 | 598 | 6.65e-27 | 117 |
Msa1340700 | AT4G15320.4 | 40.420 | 381 | 199 | 9 | 222 | 590 | 23 | 387 | 1.51e-74 | 263 |
Msa1340700 | AT4G15320.4 | 27.628 | 409 | 245 | 12 | 626 | 996 | 349 | 744 | 1.80e-29 | 126 |
Msa1340700 | AT4G24010.1 | 36.500 | 400 | 223 | 9 | 220 | 605 | 25 | 407 | 1.89e-73 | 259 |
Msa1340700 | AT4G24010.1 | 32.542 | 295 | 187 | 5 | 714 | 1001 | 415 | 704 | 3.51e-41 | 163 |
Msa1340700 | AT2G32620.1 | 41.787 | 347 | 178 | 7 | 250 | 593 | 50 | 375 | 2.08e-73 | 259 |
Msa1340700 | AT2G32620.1 | 30.659 | 349 | 206 | 8 | 677 | 999 | 392 | 730 | 3.24e-35 | 144 |
Msa1340700 | AT2G32610.1 | 39.459 | 370 | 199 | 8 | 229 | 593 | 27 | 376 | 4.86e-73 | 258 |
Msa1340700 | AT2G32610.1 | 30.214 | 374 | 225 | 10 | 677 | 1023 | 393 | 757 | 1.26e-35 | 146 |
Msa1340700 | AT4G15290.1 | 41.570 | 344 | 177 | 7 | 250 | 590 | 50 | 372 | 1.43e-72 | 256 |
Msa1340700 | AT4G15290.1 | 28.409 | 352 | 220 | 9 | 670 | 997 | 385 | 728 | 7.81e-29 | 124 |
Msa1340700 | AT4G23990.1 | 38.056 | 360 | 195 | 7 | 258 | 605 | 83 | 426 | 1.56e-71 | 253 |
Msa1340700 | AT4G23990.1 | 32.203 | 295 | 189 | 4 | 709 | 997 | 430 | 719 | 4.52e-42 | 166 |
Msa1340700 | AT4G24000.1 | 36.573 | 391 | 215 | 9 | 220 | 602 | 22 | 387 | 8.13e-71 | 251 |
Msa1340700 | AT4G24000.1 | 29.245 | 318 | 212 | 6 | 710 | 1019 | 402 | 714 | 5.06e-40 | 159 |
Msa1340700 | AT4G15320.1 | 28.517 | 789 | 422 | 24 | 206 | 932 | 10 | 718 | 6.09e-70 | 250 |
Msa1340700 | AT2G32620.4 | 43.197 | 294 | 149 | 6 | 303 | 593 | 1 | 279 | 5.14e-64 | 230 |
Msa1340700 | AT2G32620.4 | 30.659 | 349 | 206 | 8 | 677 | 999 | 296 | 634 | 2.01e-35 | 144 |
Msa1340700 | AT4G23990.2 | 32.203 | 295 | 189 | 4 | 709 | 997 | 216 | 505 | 1.49e-42 | 164 |
Msa1340700 | AT4G23990.2 | 41.038 | 212 | 111 | 5 | 406 | 605 | 3 | 212 | 3.09e-39 | 154 |
Msa1340700 | AT4G24000.2 | 29.245 | 318 | 212 | 6 | 710 | 1019 | 210 | 522 | 1.33e-40 | 158 |
Msa1340700 | AT4G24000.2 | 42.365 | 203 | 101 | 5 | 406 | 602 | 3 | 195 | 1.57e-40 | 158 |
Find 257 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTGCTAGTATTTGGTTTA+TGG | 0.085548 | tig0004309:-47727 | Msa1340700:CDS |
CATTTATATCCTTTCCTTAA+AGG | 0.086991 | tig0004309:-47327 | Msa1340700:CDS |
GGAAGCTATTCTTTGCATTT+TGG | 0.114246 | tig0004309:-47359 | Msa1340700:CDS |
GGTTCATGGGGACCTTTATT+TGG | 0.143466 | tig0004309:-47381 | Msa1340700:CDS |
TTACAGATTGGATGGATTTA+TGG | 0.144892 | tig0004309:-48608 | Msa1340700:intron |
TCCTTTCCTTAAAGGTCTTA+TGG | 0.163420 | tig0004309:-47319 | Msa1340700:CDS |
TCATTAAAGGCTAACCTTTA+TGG | 0.173844 | tig0004309:+52211 | None:intergenic |
GCTTCAACTTTGATGGAAAA+TGG | 0.218969 | tig0004309:-48868 | Msa1340700:CDS |
TGACCAACCTTGCTAGTATT+TGG | 0.222976 | tig0004309:-47734 | Msa1340700:CDS |
ATCATTCTTCATTCATCTAA+TGG | 0.229710 | tig0004309:-46950 | Msa1340700:three_prime_UTR |
CCCTTGAAAGCAGGCCTCTT+TGG | 0.236229 | tig0004309:+48515 | None:intergenic |
CATCAAATCTCTGAGGAAAT+TGG | 0.249063 | tig0004309:+49425 | None:intergenic |
GTTACCTTGTATTTGTATAT+AGG | 0.255608 | tig0004309:-47053 | Msa1340700:three_prime_UTR |
GGAAAACATATTCAGAGTTT+TGG | 0.267793 | tig0004309:-46982 | Msa1340700:three_prime_UTR |
GGTGGAGAAACGAGCAATTC+TGG | 0.274690 | tig0004309:-47635 | Msa1340700:CDS |
GAGATTGGATATAAGGAAAA+TGG | 0.279794 | tig0004309:-52348 | Msa1340700:CDS |
TTACCTTGTATTTGTATATA+GGG | 0.283973 | tig0004309:-47052 | Msa1340700:three_prime_UTR |
CTTATAATCTTGAACATTGT+TGG | 0.290135 | tig0004309:-47444 | Msa1340700:CDS |
ACAGTGTTTGCTGTTATAAT+AGG | 0.293094 | tig0004309:+50944 | None:intergenic |
CCTTTCCTTAAAGGTCTTAT+GGG | 0.294922 | tig0004309:-47318 | Msa1340700:CDS |
TTTCATTGCTTCAACTTTGA+TGG | 0.301562 | tig0004309:-48875 | Msa1340700:CDS |
TACTTGACCAGTTTCCAAAA+TGG | 0.303353 | tig0004309:-51090 | Msa1340700:CDS |
CGTGAAATATACACAAGTTT+TGG | 0.307427 | tig0004309:+49746 | None:intergenic |
AAGATAGTTACAAAGAAAAT+AGG | 0.308596 | tig0004309:+52662 | None:intergenic |
AACATTGTTGGCGTTGTTGC+TGG | 0.315186 | tig0004309:-47432 | Msa1340700:CDS |
GGTACTTTGGTCAATCCTTT+TGG | 0.315619 | tig0004309:-47268 | Msa1340700:CDS |
CGTGTGATTGGTAACCATTT+TGG | 0.316333 | tig0004309:+51076 | None:intergenic |
TTTATTAAGCTTGATGGTAT+TGG | 0.323023 | tig0004309:+51253 | None:intergenic |
ATTGTACAAGAAGAAGAAAA+TGG | 0.323047 | tig0004309:-49043 | Msa1340700:CDS |
TATCAGTAATATGTGAAATA+TGG | 0.326812 | tig0004309:-51129 | Msa1340700:CDS |
CAATTTCCTCAGAGATTTGA+TGG | 0.327211 | tig0004309:-49424 | Msa1340700:CDS |
TGATCATCCAGGGATGATTC+AGG | 0.330657 | tig0004309:-50073 | Msa1340700:intron |
CAAGTTCTGAGGTGGGCTTT+AGG | 0.332278 | tig0004309:-48458 | Msa1340700:CDS |
TGAACTTACCAAAGCATTCA+TGG | 0.336973 | tig0004309:+49682 | None:intergenic |
TCTAGTTACTGGAAAGGATT+TGG | 0.337645 | tig0004309:-51540 | Msa1340700:intron |
CAACAAAAGCAACACCATTT+AGG | 0.338739 | tig0004309:+49129 | None:intergenic |
CATATGATGCATACCCTCTA+TGG | 0.339528 | tig0004309:-51156 | Msa1340700:CDS |
TAAAGTGAAAATTAATGCTT+TGG | 0.341344 | tig0004309:-50172 | Msa1340700:CDS |
TGGTGATGAGATTGGATATA+AGG | 0.347713 | tig0004309:-52355 | Msa1340700:CDS |
TATGGATTTATTAAGCTTGA+TGG | 0.349119 | tig0004309:+51247 | None:intergenic |
AAGAATAGCTTCCCAAATAA+AGG | 0.352215 | tig0004309:+47369 | None:intergenic |
CATGATTAACATCGCGGTTC+TGG | 0.353057 | tig0004309:+51832 | None:intergenic |
CATGTGATTGTTGGCCTAAA+TGG | 0.354180 | tig0004309:-49143 | Msa1340700:CDS |
CTGAAGCAAGACAACCATTA+TGG | 0.362755 | tig0004309:-51285 | Msa1340700:CDS |
GCCAAAGAGGCCTGCTTTCA+AGG | 0.364451 | tig0004309:-48516 | Msa1340700:CDS |
CAACAATCACATGTCATCTT+TGG | 0.369790 | tig0004309:+49153 | None:intergenic |
TGTCCGTTGTGGTATGGTTA+TGG | 0.372975 | tig0004309:-48407 | Msa1340700:CDS |
TTTCTTGTGATGTGGATAAC+CGG | 0.375178 | tig0004309:+49712 | None:intergenic |
TAGCATGTAACTTTCTCAAC+AGG | 0.376511 | tig0004309:+50896 | None:intergenic |
GTTCATGGGGACCTTTATTT+GGG | 0.383016 | tig0004309:-47380 | Msa1340700:CDS |
TGAGAAGATTGATTACTTGA+AGG | 0.383639 | tig0004309:-50744 | Msa1340700:CDS |
GAAAAGAGTTATATAAGAAA+TGG | 0.388285 | tig0004309:+52707 | None:intergenic |
ATCAATATGAAAGGGCTTGA+TGG | 0.397080 | tig0004309:-49264 | Msa1340700:CDS |
ACACCACATTGTTTGAGAAT+AGG | 0.398730 | tig0004309:+47186 | None:intergenic |
CCTTTCTTGCCTAAGCAAAC+TGG | 0.407328 | tig0004309:-47210 | Msa1340700:CDS |
CTTTGGCTTCTTGCCATCCA+TGG | 0.408055 | tig0004309:-52642 | Msa1340700:exon |
TCAACAGGCGAAAGCTGGTT+TGG | 0.409455 | tig0004309:+51004 | None:intergenic |
GATTGATTACTTGAAGGATA+AGG | 0.410133 | tig0004309:-50738 | Msa1340700:CDS |
TCTTCATCTCCAACCACTCT+TGG | 0.410877 | tig0004309:+51921 | None:intergenic |
TTCCTAATGGATCCTCAACT+TGG | 0.415846 | tig0004309:-49466 | Msa1340700:CDS |
AGAGGCCATGTGCTTCCTAA+TGG | 0.416719 | tig0004309:-49479 | Msa1340700:CDS |
CAAAGAAAATAGGAGTTAGA+AGG | 0.419930 | tig0004309:+52672 | None:intergenic |
GAAGAAACCTGAGGAGGGTT+GGG | 0.420141 | tig0004309:-50136 | Msa1340700:CDS |
GAGAGTTATATCTCTTCAAA+TGG | 0.425206 | tig0004309:-47494 | Msa1340700:CDS |
GCAGCAGATGATGCTGAATT+CGG | 0.427332 | tig0004309:-47516 | Msa1340700:CDS |
GTCTCATCACAATTACTATT+CGG | 0.429695 | tig0004309:+51224 | None:intergenic |
AGTGAAAATTAATGCTTTGG+TGG | 0.430004 | tig0004309:-50169 | Msa1340700:CDS |
AACGAGCAATTCTGGGTGAT+TGG | 0.430664 | tig0004309:-47627 | Msa1340700:CDS |
CGCCATTGTCCGTTGTGGTA+TGG | 0.434378 | tig0004309:-48413 | Msa1340700:CDS |
TTGTACAAGAAGAAGAAAAT+GGG | 0.437828 | tig0004309:-49042 | Msa1340700:CDS |
ACTCGCTATAAGCGCCATAA+AGG | 0.437891 | tig0004309:-52225 | Msa1340700:intron |
CTTCTTTCCTTGACAAAAGT+AGG | 0.439949 | tig0004309:+50710 | None:intergenic |
CGAGTTTGTGGTGATGAGAT+TGG | 0.440581 | tig0004309:-52363 | Msa1340700:CDS |
AGGGTAGTCAACAGAAAGTA+TGG | 0.443321 | tig0004309:+50916 | None:intergenic |
ACAACGGACAATGGCGACTA+AGG | 0.443705 | tig0004309:+48420 | None:intergenic |
CTACTCCAGCTAGAACTTTG+AGG | 0.444405 | tig0004309:+47565 | None:intergenic |
CTAAAGCCCACCTCAGAACT+TGG | 0.446566 | tig0004309:+48459 | None:intergenic |
CCAGTTTGCTTAGGCAAGAA+AGG | 0.446921 | tig0004309:+47210 | None:intergenic |
TCGAAAATATGTCGAGTTTG+TGG | 0.446971 | tig0004309:-52375 | Msa1340700:CDS |
GATTGTGTATTTGTGCCTTC+AGG | 0.451007 | tig0004309:+48838 | None:intergenic |
AGCCATGGTGTTTGTGGCCA+TGG | 0.451283 | tig0004309:+52625 | None:intergenic |
TCATAACAAGGTTTACAAAC+AGG | 0.451635 | tig0004309:+52291 | None:intergenic |
ATCCACCAGTTTCTGAGAAA+AGG | 0.453691 | tig0004309:-49176 | Msa1340700:CDS |
GCCACAACTTATGTTATGAA+TGG | 0.454463 | tig0004309:+48801 | None:intergenic |
TGCATAACCCAACCCTCCTC+AGG | 0.454891 | tig0004309:+50129 | None:intergenic |
CTCCTACTATTGTGGTACTT+TGG | 0.456509 | tig0004309:-47281 | Msa1340700:CDS |
AAGTAAGTTTCGCGTGTGAT+TGG | 0.458994 | tig0004309:+51064 | None:intergenic |
TTAACAGTGGTAGTGGTTCA+TGG | 0.459246 | tig0004309:-47395 | Msa1340700:CDS |
GTTCAAATCTTATAGATAAA+CGG | 0.461821 | tig0004309:+51038 | None:intergenic |
TTGTCTGTTGAACACAGTTC+CGG | 0.467556 | tig0004309:+49215 | None:intergenic |
TCCCAAGTTGAGGATCCATT+AGG | 0.467898 | tig0004309:+49464 | None:intergenic |
GAGATTGAAGAAGGACTTGA+AGG | 0.469245 | tig0004309:-48970 | Msa1340700:CDS |
GTGGAGAAACGAGCAATTCT+GGG | 0.469735 | tig0004309:-47634 | Msa1340700:CDS |
ATTGGAACTTTGCGCCATAA+TGG | 0.473762 | tig0004309:+51271 | None:intergenic |
GAAGAAGAAAATGGGAGGAA+AGG | 0.474217 | tig0004309:-49034 | Msa1340700:CDS |
ACTAAAGTATCTTGAGAGGT+TGG | 0.474662 | tig0004309:-48378 | Msa1340700:CDS |
CCGGTGTACTCGAGCTTCGA+TGG | 0.475657 | tig0004309:-47680 | Msa1340700:CDS |
ATCACAATTACTATTCGGTA+TGG | 0.477874 | tig0004309:+51229 | None:intergenic |
AGAATAGGACCAGTTTGCTT+AGG | 0.480129 | tig0004309:+47201 | None:intergenic |
CAGGTATACTTAGGAAGTGC+TGG | 0.480378 | tig0004309:-49797 | Msa1340700:CDS |
TGAAGAAACCTGAGGAGGGT+TGG | 0.480922 | tig0004309:-50137 | Msa1340700:CDS |
AGCCGGTGCCATGAATGCTT+TGG | 0.481275 | tig0004309:-49690 | Msa1340700:intron |
CCCATAAGACCTTTAAGGAA+AGG | 0.481887 | tig0004309:+47318 | None:intergenic |
ATGAGAAAATTGATGCCAAA+AGG | 0.481962 | tig0004309:+47253 | None:intergenic |
AGGCACAAATACACAATCAT+TGG | 0.484166 | tig0004309:-48833 | Msa1340700:CDS |
AAAGGGCTTGATGGTATTCA+AGG | 0.486974 | tig0004309:-49255 | Msa1340700:CDS |
GATGAAGATGAGAACCTTGA+TGG | 0.487365 | tig0004309:-51906 | Msa1340700:CDS |
GTCTTATGGGAAAACAAAAC+AGG | 0.491114 | tig0004309:-47305 | Msa1340700:CDS |
CAATCGAGATTCAACATGAA+TGG | 0.491170 | tig0004309:+49535 | None:intergenic |
TTGGCTTTGCAGGTATACTT+AGG | 0.492259 | tig0004309:-49806 | Msa1340700:intron |
TACTGGAAAGGATTTGGAAG+GGG | 0.493586 | tig0004309:-51534 | Msa1340700:CDS |
GAAGCGATTCGGTCAGTCTC+CGG | 0.496950 | tig0004309:-48899 | Msa1340700:CDS |
TATCATAGATCAATATGAAA+GGG | 0.497012 | tig0004309:-49272 | Msa1340700:intron |
TTCAAGATTATAAGAGTGGT+TGG | 0.497240 | tig0004309:+47453 | None:intergenic |
CCAGCTGTGTGTCTCCTCAC+TGG | 0.497566 | tig0004309:-48293 | Msa1340700:CDS |
AAATACACAATCATTGGTTA+AGG | 0.498004 | tig0004309:-48827 | Msa1340700:CDS |
CAAGCCAGCCATGGTGTTTG+TGG | 0.498990 | tig0004309:+52619 | None:intergenic |
AATTAATGCTTTGGTGGCAA+AGG | 0.499303 | tig0004309:-50163 | Msa1340700:CDS |
TTCAACAGACAAGCATTGTA+TGG | 0.499531 | tig0004309:-49204 | Msa1340700:CDS |
AAAGTTGAAGCAATGAAAAC+CGG | 0.500806 | tig0004309:+48880 | None:intergenic |
GGAAAGGATTATGTTAGAAA+AGG | 0.500881 | tig0004309:-49018 | Msa1340700:CDS |
CTTCTGAGTTTGCTCGAAGG+TGG | 0.500934 | tig0004309:-50823 | Msa1340700:CDS |
CCCTGCAGGTTGTCCAAGAG+TGG | 0.501687 | tig0004309:-51934 | Msa1340700:intron |
GATTATGTTAGAAAAGGATC+TGG | 0.501904 | tig0004309:-49012 | Msa1340700:CDS |
ATAATAGGCGGTTCTTTCAA+AGG | 0.504517 | tig0004309:+50959 | None:intergenic |
GGTTTCCTCAAAGTTCTAGC+TGG | 0.504559 | tig0004309:-47570 | Msa1340700:CDS |
CACCTATCAATCTGTCAGAT+AGG | 0.504559 | tig0004309:-48487 | Msa1340700:CDS |
TAACAGTGGTAGTGGTTCAT+GGG | 0.506583 | tig0004309:-47394 | Msa1340700:CDS |
TTCGATGAAGATTTATTGGT+AGG | 0.507280 | tig0004309:+52393 | None:intergenic |
AACCTTGTTATGAGTATGAA+AGG | 0.511222 | tig0004309:-52281 | Msa1340700:CDS |
CAGAGTTTCTTCCCAAGTTG+AGG | 0.511245 | tig0004309:+49454 | None:intergenic |
ATGCTGAGAAGTTGTGAAAG+AGG | 0.512498 | tig0004309:-47160 | Msa1340700:exon |
ATTACTGATATGAGCCATAG+AGG | 0.513695 | tig0004309:+51142 | None:intergenic |
GACCAAAGTACCACAATAGT+AGG | 0.513830 | tig0004309:+47279 | None:intergenic |
ACCATGGCTGGCTTGATCAC+CGG | 0.514768 | tig0004309:-52611 | Msa1340700:CDS |
CTCCTTTCATACTCATAACA+AGG | 0.514862 | tig0004309:+52279 | None:intergenic |
CCAAAGAGGCCTGCTTTCAA+GGG | 0.515156 | tig0004309:-48515 | Msa1340700:CDS |
GAAGATTTATTGGTAGGAGG+AGG | 0.517338 | tig0004309:+52399 | None:intergenic |
GATCTCGAAGAGATTGAAGA+AGG | 0.520250 | tig0004309:-48979 | Msa1340700:CDS |
ATGGCCACAAACACCATGGC+TGG | 0.521203 | tig0004309:-52623 | Msa1340700:CDS |
TGATTATTTACAGGAAAGTG+TGG | 0.521337 | tig0004309:-51703 | Msa1340700:intron |
GATGAAGATTTATTGGTAGG+AGG | 0.523558 | tig0004309:+52396 | None:intergenic |
AACAACACTCGTGATCATCC+AGG | 0.524459 | tig0004309:-50084 | Msa1340700:CDS |
TTCTGAGTTTGCTCGAAGGT+GGG | 0.525003 | tig0004309:-50822 | Msa1340700:CDS |
AAACATCAACAGGCGAAAGC+TGG | 0.527228 | tig0004309:+50999 | None:intergenic |
AGCCAAACCTGAATCATCCC+TGG | 0.527343 | tig0004309:+50066 | None:intergenic |
AAACCAAATACTAGCAAGGT+TGG | 0.528295 | tig0004309:+47731 | None:intergenic |
CAGTATATTGCATGCCAAAG+AGG | 0.531421 | tig0004309:-48529 | Msa1340700:CDS |
AAGTAATACTCAGGTGCCCT+TGG | 0.532424 | tig0004309:+50770 | None:intergenic |
GTGGAGTTGCGATCGAAGAC+TGG | 0.533884 | tig0004309:-47656 | Msa1340700:CDS |
CAAGATGGAACTCCATGGCC+TGG | 0.534501 | tig0004309:-50108 | Msa1340700:CDS |
AGCAAAGGGATTGAAGTGAA+TGG | 0.537457 | tig0004309:+48332 | None:intergenic |
CTTCAAAATCATCTCCATCA+AGG | 0.538355 | tig0004309:+51892 | None:intergenic |
AATTCTACAGCAATGAAGAA+TGG | 0.538923 | tig0004309:-51505 | Msa1340700:CDS |
GGTGCAGACCCCTTGAAAGC+AGG | 0.540302 | tig0004309:+48506 | None:intergenic |
GGTCCAGTGTATGTCGGTAC+CGG | 0.540339 | tig0004309:-49234 | Msa1340700:CDS |
CATATGCAGGTGTTAAGATA+CGG | 0.542764 | tig0004309:+51173 | None:intergenic |
TACCAAAGCATTCATGGCAC+CGG | 0.544211 | tig0004309:+49688 | None:intergenic |
GAGTACACCGGTTAAAATGA+TGG | 0.544212 | tig0004309:+47692 | None:intergenic |
CTATGAAGAGAAGACTGACT+GGG | 0.547237 | tig0004309:-48779 | Msa1340700:CDS |
GCTATGAAGAGAAGACTGAC+TGG | 0.547807 | tig0004309:-48780 | Msa1340700:CDS |
TCTATAAGATTTGAACGTGA+AGG | 0.548818 | tig0004309:-51031 | Msa1340700:CDS |
AACCTATCTGACAGATTGAT+AGG | 0.549050 | tig0004309:+48485 | None:intergenic |
GATGCTATTAACAGTGGTAG+TGG | 0.549146 | tig0004309:-47402 | Msa1340700:CDS |
CAAAGATGACATGTGATTGT+TGG | 0.550852 | tig0004309:-49152 | Msa1340700:CDS |
GCAGGTTGTCCAAGAGTGGT+TGG | 0.550939 | tig0004309:-51930 | Msa1340700:intron |
AATGTTCAAGATTATAAGAG+TGG | 0.552442 | tig0004309:+47449 | None:intergenic |
GGAAACGGAAGAAGAAAGCT+AGG | 0.553815 | tig0004309:+51194 | None:intergenic |
TGATCACGAGTGTTGTTACC+AGG | 0.553861 | tig0004309:+50090 | None:intergenic |
TTCTTGTGATGTGGATAACC+GGG | 0.553939 | tig0004309:+49713 | None:intergenic |
CGAGTGTTGTTACCAGGCCA+TGG | 0.554027 | tig0004309:+50096 | None:intergenic |
AACCATACCACAACGGACAA+TGG | 0.554382 | tig0004309:+48411 | None:intergenic |
GAAGACTGACTGGGGAAAAG+AGG | 0.554814 | tig0004309:-48770 | Msa1340700:intron |
CAAGGAAAGAAGGTCTATGA+AGG | 0.554936 | tig0004309:-50699 | Msa1340700:intron |
TTAAGATGCACTGCAGAGGA+TGG | 0.556703 | tig0004309:-48556 | Msa1340700:CDS |
TCATCATGATGATTCTTGAC+CGG | 0.558168 | tig0004309:+51861 | None:intergenic |
GGTACTCATCTTCTTCACCT+TGG | 0.558311 | tig0004309:+51408 | None:intergenic |
AAATATGGTTTGCACTGTCA+TGG | 0.559125 | tig0004309:-51114 | Msa1340700:CDS |
TTGTGCAGTATGCAAGCAAA+GGG | 0.561163 | tig0004309:+48318 | None:intergenic |
TTATCATAGATCAATATGAA+AGG | 0.562567 | tig0004309:-49273 | Msa1340700:intron |
AATCTCTTCGAGATCAAACA+TGG | 0.564981 | tig0004309:+48987 | None:intergenic |
GTTACTGGAAAGGATTTGGA+AGG | 0.565772 | tig0004309:-51536 | Msa1340700:CDS |
GTACTCGAGCTTCGATGGAG+TGG | 0.567634 | tig0004309:-47675 | Msa1340700:CDS |
AAAGTATAGTATTGAACCAA+GGG | 0.568992 | tig0004309:-50786 | Msa1340700:CDS |
ATGAGTATGAAAGGAGTGAA+GGG | 0.569105 | tig0004309:-52272 | Msa1340700:CDS |
GCCATTCATAACATAAGTTG+TGG | 0.569594 | tig0004309:-48802 | Msa1340700:CDS |
GAGGGTTGGGTTATGCAAGA+TGG | 0.571841 | tig0004309:-50123 | Msa1340700:CDS |
TTACTGGAAAGGATTTGGAA+GGG | 0.572590 | tig0004309:-51535 | Msa1340700:CDS |
GAGCAATTCTGGGTGATTGG+AGG | 0.572765 | tig0004309:-47624 | Msa1340700:CDS |
AGAGGGTATGCATCATATGC+AGG | 0.574991 | tig0004309:+51160 | None:intergenic |
GCACCGGCTTTCTTGTGATG+TGG | 0.578097 | tig0004309:+49704 | None:intergenic |
GGTTGCACCAAGTTCTGAGG+TGG | 0.578879 | tig0004309:-48466 | Msa1340700:CDS |
TGAAGTGAATGGATAAACAA+TGG | 0.580549 | tig0004309:+48343 | None:intergenic |
GGCTCTGAAGAAACCTGAGG+AGG | 0.581450 | tig0004309:-50142 | Msa1340700:CDS |
TATGAGTATGAAAGGAGTGA+AGG | 0.581494 | tig0004309:-52273 | Msa1340700:CDS |
AAGATTATAAGAGTGGTTGG+TGG | 0.581930 | tig0004309:+47456 | None:intergenic |
GTGTTTGCTGTTATAATAGG+CGG | 0.582570 | tig0004309:+50947 | None:intergenic |
TGCACTAGACGTGGAAGGCA+AGG | 0.582661 | tig0004309:-49774 | Msa1340700:CDS |
AAACAGGACTCCTACTATTG+TGG | 0.584032 | tig0004309:-47289 | Msa1340700:CDS |
ATGGTGTTTGTGGCCATGGA+TGG | 0.585266 | tig0004309:+52629 | None:intergenic |
AAGTGCTGGTGCACTAGACG+TGG | 0.585858 | tig0004309:-49783 | Msa1340700:CDS |
TTCTCATTAAAGTAATACTC+AGG | 0.586653 | tig0004309:+50761 | None:intergenic |
TCCTAATGGATCCTCAACTT+GGG | 0.587879 | tig0004309:-49465 | Msa1340700:CDS |
CCAGTGAGGAGACACACAGC+TGG | 0.588398 | tig0004309:+48293 | None:intergenic |
GCCGGTGATCAAGCCAGCCA+TGG | 0.592740 | tig0004309:+52610 | None:intergenic |
TTATAGCGAGTGTTGCATTG+AGG | 0.596029 | tig0004309:+52237 | None:intergenic |
ACATGCTATGTATCAGATGA+TGG | 0.599208 | tig0004309:-50881 | Msa1340700:CDS |
AGAGTTATATAAGAAATGGT+AGG | 0.603357 | tig0004309:+52711 | None:intergenic |
AAAAGTATAGTATTGAACCA+AGG | 0.604899 | tig0004309:-50787 | Msa1340700:CDS |
TATCCACATCACAAGAAAGC+CGG | 0.606549 | tig0004309:-49707 | Msa1340700:CDS |
GTTCCGGTACCGACATACAC+TGG | 0.608801 | tig0004309:+49231 | None:intergenic |
GAGTTGCGATCGAAGACTGG+TGG | 0.608941 | tig0004309:-47653 | Msa1340700:CDS |
CCATCGAAGCTCGAGTACAC+CGG | 0.609136 | tig0004309:+47680 | None:intergenic |
ATTGTGCAGTATGCAAGCAA+AGG | 0.610701 | tig0004309:+48317 | None:intergenic |
CAGGTGTTAAGATACGGAAA+CGG | 0.615839 | tig0004309:+51179 | None:intergenic |
AAACTTCTGAGTTTGCTCGA+AGG | 0.618206 | tig0004309:-50826 | Msa1340700:CDS |
TGAGAAATGAGAATTAGAGC+CGG | 0.621491 | tig0004309:+52592 | None:intergenic |
GTTGCACCAAGTTCTGAGGT+GGG | 0.622152 | tig0004309:-48465 | Msa1340700:CDS |
GGATTTAAGATGCACTGCAG+AGG | 0.622405 | tig0004309:-48560 | Msa1340700:CDS |
GAAAACTAAAGTATCTTGAG+AGG | 0.624033 | tig0004309:-48382 | Msa1340700:CDS |
CCATAAACCAAATACTAGCA+AGG | 0.627526 | tig0004309:+47727 | None:intergenic |
TTAGTCGCCATTGTCCGTTG+TGG | 0.629096 | tig0004309:-48418 | Msa1340700:CDS |
TAACCCTATATACAAATACA+AGG | 0.632084 | tig0004309:+47049 | None:intergenic |
TTACTGATATGAGCCATAGA+GGG | 0.633860 | tig0004309:+51143 | None:intergenic |
ACAACACTCGTGATCATCCA+GGG | 0.637841 | tig0004309:-50083 | Msa1340700:CDS |
ATAGGTTGCACCAAGTTCTG+AGG | 0.641361 | tig0004309:-48469 | Msa1340700:CDS |
TACAAGAAGAAGAAAATGGG+AGG | 0.643239 | tig0004309:-49039 | Msa1340700:CDS |
CAAAGAGGCCTGCTTTCAAG+GGG | 0.644794 | tig0004309:-48514 | Msa1340700:CDS |
ATCCATGGCCACAAACACCA+TGG | 0.646471 | tig0004309:-52627 | Msa1340700:exon |
CAATAGCAAGGCTATTAGAG+AGG | 0.646495 | tig0004309:-49497 | Msa1340700:CDS |
GCTCTGAAGAAACCTGAGGA+GGG | 0.646838 | tig0004309:-50141 | Msa1340700:CDS |
GAAAATGGAGGACTTCCTGA+AGG | 0.649098 | tig0004309:-48853 | Msa1340700:CDS |
AACAGTGGTAGTGGTTCATG+GGG | 0.650444 | tig0004309:-47393 | Msa1340700:CDS |
TCAACTTTGATGGAAAATGG+AGG | 0.650813 | tig0004309:-48865 | Msa1340700:CDS |
TTATGCAAGATGGAACTCCA+TGG | 0.651144 | tig0004309:-50113 | Msa1340700:CDS |
GAGAGGTCTGCTGAACAAAG+AGG | 0.652698 | tig0004309:-51444 | Msa1340700:CDS |
GAACCGCGATGTTAATCATG+TGG | 0.654400 | tig0004309:-51829 | Msa1340700:intron |
TTTCTCACATGACTCTGATG+AGG | 0.654483 | tig0004309:-52576 | Msa1340700:intron |
ATTCAAGGTCCAGTGTATGT+CGG | 0.656666 | tig0004309:-49240 | Msa1340700:CDS |
GTCTCTGATGCTATTAACAG+TGG | 0.659427 | tig0004309:-47408 | Msa1340700:CDS |
AAAGTAAGGCAAGAAAAGAG+AGG | 0.661249 | tig0004309:-51461 | Msa1340700:CDS |
GGTCTGCTGAACAAAGAGGA+TGG | 0.663433 | tig0004309:-51440 | Msa1340700:CDS |
CCGTTGTGGTATGGTTATGG+AGG | 0.665569 | tig0004309:-48404 | Msa1340700:CDS |
GCTGGTGCACTAGACGTGGA+AGG | 0.667350 | tig0004309:-49779 | Msa1340700:CDS |
AGAAGGACTTGAAGGGTACG+AGG | 0.671874 | tig0004309:-48962 | Msa1340700:CDS |
TCACTACATCAACAATAGCA+AGG | 0.673996 | tig0004309:-49509 | Msa1340700:CDS |
AGGATCCATTAGGAAGCACA+TGG | 0.676227 | tig0004309:+49474 | None:intergenic |
AGCATGTAACTTTCTCAACA+GGG | 0.684136 | tig0004309:+50897 | None:intergenic |
AGATTGAAGAAGGACTTGAA+GGG | 0.687955 | tig0004309:-48969 | Msa1340700:CDS |
TCAATACCATCAAATCTCTG+AGG | 0.692117 | tig0004309:+49418 | None:intergenic |
AAAGGCTCTGAAGAAACCTG+AGG | 0.698711 | tig0004309:-50145 | Msa1340700:CDS |
GAATGATGAACTTTCCAGTG+AGG | 0.701254 | tig0004309:+48279 | None:intergenic |
GGTCCTATTCTCAAACAATG+TGG | 0.702569 | tig0004309:-47189 | Msa1340700:CDS |
TATGAAGAGAAGACTGACTG+GGG | 0.708217 | tig0004309:-48778 | Msa1340700:CDS |
GAGGATGGTAAAGAAGACCA+AGG | 0.711593 | tig0004309:-51425 | Msa1340700:CDS |
CCTCCATAACCATACCACAA+CGG | 0.716274 | tig0004309:+48404 | None:intergenic |
TTACCACATGATTAACATCG+CGG | 0.717547 | tig0004309:+51826 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTAGAAAATAACATTA+TGG | + | tig0004309:47493-47512 | None:intergenic | 10.0% |
!!! | TAAAGATATGATTTTATTTT+TGG | - | tig0004309:48923-48942 | Msa1340700:CDS | 10.0% |
!! | AAACAGTTTATATATAATTT+AGG | - | tig0004309:49732-49751 | Msa1340700:CDS | 10.0% |
!! | ATAACAAAAAGTTTCATTAA+AGG | + | tig0004309:47397-47416 | None:intergenic | 15.0% |
!! | AAGATTATATGATTATTTAC+AGG | - | tig0004309:47880-47899 | Msa1340700:intron | 15.0% |
!!! | ATACTATACTTTTTACAAAA+AGG | + | tig0004309:48798-48817 | None:intergenic | 15.0% |
!!! | TTTTCATTATCTTACAATTA+AGG | - | tig0004309:49583-49602 | Msa1340700:intron | 15.0% |
!! | GAAATTTCACTTAAAAAAAA+TGG | - | tig0004309:50280-50299 | Msa1340700:intron | 15.0% |
!!! | TTGTAACTATTGTTAATTTT+TGG | - | tig0004309:52588-52607 | Msa1340700:CDS | 15.0% |
!!! | TGTAACTATTGTTAATTTTT+GGG | - | tig0004309:52589-52608 | Msa1340700:CDS | 15.0% |
!! | GAAAAGAGTTATATAAGAAA+TGG | + | tig0004309:46888-46907 | None:intergenic | 20.0% |
!! | AAGATAGTTACAAAGAAAAT+AGG | + | tig0004309:46933-46952 | None:intergenic | 20.0% |
!!! | ATTTTCTTTGTAACTATCTT+TGG | - | tig0004309:46933-46952 | Msa1340700:three_prime_UTR | 20.0% |
!!! | ATCTTTTCTTTCTTTCATTT+TGG | - | tig0004309:47044-47063 | Msa1340700:three_prime_UTR | 20.0% |
!! | AATGCTTTATAAAACAAACT+AGG | + | tig0004309:47124-47143 | None:intergenic | 20.0% |
!!! | TAGTTTGTTTTATAAAGCAT+TGG | - | tig0004309:47123-47142 | Msa1340700:three_prime_UTR | 20.0% |
!!! | TATTTTCGATGAAGATTTAT+TGG | + | tig0004309:47206-47225 | None:intergenic | 20.0% |
!! | TGAAATTAACAGAAATGAAT+CGG | - | tig0004309:47824-47843 | Msa1340700:intron | 20.0% |
!!! | AGTCTTTTCAAAATTATACA+AGG | + | tig0004309:47967-47986 | None:intergenic | 20.0% |
!! | ATGATGAACAATTTGTATAA+TGG | + | tig0004309:48015-48034 | None:intergenic | 20.0% |
!! | TTTACCTTATTATTACAGTA+TGG | - | tig0004309:48284-48303 | Msa1340700:CDS | 20.0% |
!! | TATCAGTAATATGTGAAATA+TGG | - | tig0004309:48463-48482 | Msa1340700:CDS | 20.0% |
!! | GTTCAAATCTTATAGATAAA+CGG | + | tig0004309:48557-48576 | None:intergenic | 20.0% |
!!! | TGGTTTTGTTTTCTTATTTT+AGG | - | tig0004309:48943-48962 | Msa1340700:CDS | 20.0% |
!! | ACATAAACATCTTATATCAT+AGG | + | tig0004309:49190-49209 | None:intergenic | 20.0% |
!! | TAAAGTGAAAATTAATGCTT+TGG | - | tig0004309:49420-49439 | Msa1340700:CDS | 20.0% |
!!! | AATTTGTTGATTTGAAGTTA+AGG | + | tig0004309:50257-50276 | None:intergenic | 20.0% |
!! | ATGATAAAAACAACGTTTAA+TGG | + | tig0004309:50306-50325 | None:intergenic | 20.0% |
!! | TTATCATAGATCAATATGAA+AGG | - | tig0004309:50319-50338 | Msa1340700:intron | 20.0% |
!! | TATCATAGATCAATATGAAA+GGG | - | tig0004309:50320-50339 | Msa1340700:intron | 20.0% |
!!! | GACATTTTTTAATACTCTAA+AGG | + | tig0004309:51621-51640 | None:intergenic | 20.0% |
!!! | AGAGTATTAAAAAATGTCTA+TGG | - | tig0004309:51623-51642 | Msa1340700:intron | 20.0% |
!!! | TTTATATCCATCATTTTAAC+CGG | - | tig0004309:51893-51912 | Msa1340700:CDS | 20.0% |
!!! | ATCAATTTTCTCATTGATTT+GGG | - | tig0004309:52348-52367 | Msa1340700:CDS | 20.0% |
!! | TTACCTTGTATTTGTATATA+GGG | - | tig0004309:52540-52559 | Msa1340700:intron | 20.0% |
!!! | TTCTTTCTTTCATTTTGGTT+TGG | - | tig0004309:47049-47068 | Msa1340700:three_prime_UTR | 25.0% |
! | AAAATACTTGCACTAGTAAA+TGG | - | tig0004309:47507-47526 | Msa1340700:CDS | 25.0% |
!! | TTTTAAATACCGAATCAGAT+TGG | + | tig0004309:47607-47626 | None:intergenic | 25.0% |
! | TATTAGAAGTGATAACTTAC+AGG | + | tig0004309:48208-48227 | None:intergenic | 25.0% |
!! | TTTATTAAGCTTGATGGTAT+TGG | + | tig0004309:48342-48361 | None:intergenic | 25.0% |
! | TATGGATTTATTAAGCTTGA+TGG | + | tig0004309:48348-48367 | None:intergenic | 25.0% |
!!! | TATGCTTTTGTTTGATTGTT+TGG | - | tig0004309:48740-48759 | Msa1340700:intron | 25.0% |
!! | AAAAGTATAGTATTGAACCA+AGG | - | tig0004309:48805-48824 | Msa1340700:CDS | 25.0% |
!! | AAAGTATAGTATTGAACCAA+GGG | - | tig0004309:48806-48825 | Msa1340700:CDS | 25.0% |
! | TTCTCATTAAAGTAATACTC+AGG | + | tig0004309:48834-48853 | None:intergenic | 25.0% |
!!! | TTCTTATTTTAGGCTTTGTT+TGG | - | tig0004309:48953-48972 | Msa1340700:CDS | 25.0% |
! | AACACACAAAAGTTACTATA+AGG | + | tig0004309:49370-49389 | None:intergenic | 25.0% |
! | ATAAAGCAATAACAAGTTAG+AGG | + | tig0004309:49559-49578 | None:intergenic | 25.0% |
!!! | ACTGTTTCTATATACCATTA+TGG | + | tig0004309:49719-49738 | None:intergenic | 25.0% |
!!! | TTGAATTCTTTAATTTGTGC+AGG | - | tig0004309:49944-49963 | Msa1340700:intron | 25.0% |
! | ATTGTACAAGAAGAAGAAAA+TGG | - | tig0004309:50549-50568 | Msa1340700:intron | 25.0% |
! | TTGTACAAGAAGAAGAAAAT+GGG | - | tig0004309:50550-50569 | Msa1340700:intron | 25.0% |
!! | AAATACACAATCATTGGTTA+AGG | - | tig0004309:50765-50784 | Msa1340700:CDS | 25.0% |
! | GATATAGTAATTGTTAGAAC+AGG | + | tig0004309:50934-50953 | None:intergenic | 25.0% |
!! | ATATGTTTTCCATTACAGAT+TGG | - | tig0004309:50972-50991 | Msa1340700:CDS | 25.0% |
! | TGATTACAAGAAATTGATAG+AGG | + | tig0004309:51353-51372 | None:intergenic | 25.0% |
! | TTGTGTTCTTTGTAATATCA+AGG | - | tig0004309:51732-51751 | Msa1340700:intron | 25.0% |
! | AATAGCATCAATAATCTCAA+AGG | + | tig0004309:51789-51808 | None:intergenic | 25.0% |
! | AATGTTCAAGATTATAAGAG+TGG | + | tig0004309:52146-52165 | None:intergenic | 25.0% |
! | CTTATAATCTTGAACATTGT+TGG | - | tig0004309:52148-52167 | Msa1340700:intron | 25.0% |
! | CATTTATATCCTTTCCTTAA+AGG | - | tig0004309:52265-52284 | Msa1340700:CDS | 25.0% |
!!! | CATCAATTTTCTCATTGATT+TGG | - | tig0004309:52347-52366 | Msa1340700:CDS | 25.0% |
! | GTTACCTTGTATTTGTATAT+AGG | - | tig0004309:52539-52558 | Msa1340700:intron | 25.0% |
! | TAACCCTATATACAAATACA+AGG | + | tig0004309:52546-52565 | None:intergenic | 25.0% |
! | ATCATTCTTCATTCATCTAA+TGG | - | tig0004309:52642-52661 | Msa1340700:exon | 25.0% |
CAAAGAAAATAGGAGTTAGA+AGG | + | tig0004309:46923-46942 | None:intergenic | 30.0% | |
TTCGATGAAGATTTATTGGT+AGG | + | tig0004309:47202-47221 | None:intergenic | 30.0% | |
GAGATTGGATATAAGGAAAA+TGG | - | tig0004309:47244-47263 | Msa1340700:CDS | 30.0% | |
TCATAACAAGGTTTACAAAC+AGG | + | tig0004309:47304-47323 | None:intergenic | 30.0% | |
! | AACCTTGTTATGAGTATGAA+AGG | - | tig0004309:47311-47330 | Msa1340700:CDS | 30.0% |
TCATTAAAGGCTAACCTTTA+TGG | + | tig0004309:47384-47403 | None:intergenic | 30.0% | |
AGTAAATGGTGAAATGTGAT+TGG | - | tig0004309:47521-47540 | Msa1340700:CDS | 30.0% | |
!! | TGATTTTGAAGATGAGTTTC+CGG | - | tig0004309:47712-47731 | Msa1340700:CDS | 30.0% |
TGATTATTTACAGGAAAGTG+TGG | - | tig0004309:47889-47908 | Msa1340700:intron | 30.0% | |
AATTCTACAGCAATGAAGAA+TGG | - | tig0004309:48087-48106 | Msa1340700:intron | 30.0% | |
GAGTAGAAAAATGGAAAGTA+AGG | - | tig0004309:48117-48136 | Msa1340700:intron | 30.0% | |
TCAGCCATACTGTAATAATA+AGG | + | tig0004309:48291-48310 | None:intergenic | 30.0% | |
ATCACAATTACTATTCGGTA+TGG | + | tig0004309:48366-48385 | None:intergenic | 30.0% | |
GTCTCATCACAATTACTATT+CGG | + | tig0004309:48371-48390 | None:intergenic | 30.0% | |
TCTATAAGATTTGAACGTGA+AGG | - | tig0004309:48561-48580 | Msa1340700:CDS | 30.0% | |
GAACTAACAAAAACATCAAC+AGG | + | tig0004309:48606-48625 | None:intergenic | 30.0% | |
!! | ACAGTGTTTGCTGTTATAAT+AGG | + | tig0004309:48651-48670 | None:intergenic | 30.0% |
TGAGAAGATTGATTACTTGA+AGG | - | tig0004309:48848-48867 | Msa1340700:CDS | 30.0% | |
GATTGATTACTTGAAGGATA+AGG | - | tig0004309:48854-48873 | Msa1340700:CDS | 30.0% | |
ATAAACACTTGAACTACGTA+TGG | + | tig0004309:49134-49153 | None:intergenic | 30.0% | |
TCAAATAAGTCAATCCGAAT+AGG | - | tig0004309:49164-49183 | Msa1340700:CDS | 30.0% | |
TCTTATATCATAGGCCTATT+CGG | + | tig0004309:49181-49200 | None:intergenic | 30.0% | |
AGTGAAAATTAATGCTTTGG+TGG | - | tig0004309:49423-49442 | Msa1340700:CDS | 30.0% | |
ATCCAAACACTTAGCAAATA+AGG | + | tig0004309:49633-49652 | None:intergenic | 30.0% | |
! | CGTGAAATATACACAAGTTT+TGG | + | tig0004309:49849-49868 | None:intergenic | 30.0% |
ACCAAATCAAAAAAGAAGTC+AGG | - | tig0004309:50499-50518 | Msa1340700:intron | 30.0% | |
!!! | TCCTGACTTCTTTTTTGATT+TGG | + | tig0004309:50503-50522 | None:intergenic | 30.0% |
AAAAAGAAGTCAGGAACAAA+TGG | - | tig0004309:50508-50527 | Msa1340700:intron | 30.0% | |
GGAAAGGATTATGTTAGAAA+AGG | - | tig0004309:50574-50593 | Msa1340700:intron | 30.0% | |
GATTATGTTAGAAAAGGATC+TGG | - | tig0004309:50580-50599 | Msa1340700:intron | 30.0% | |
AAAAATTTCGAGAAGCGATT+CGG | - | tig0004309:50682-50701 | Msa1340700:intron | 30.0% | |
AAAGTTGAAGCAATGAAAAC+CGG | + | tig0004309:50715-50734 | None:intergenic | 30.0% | |
TTTCATTGCTTCAACTTTGA+TGG | - | tig0004309:50717-50736 | Msa1340700:CDS | 30.0% | |
TTTGCTTGGATATGAAACTA+GGG | - | tig0004309:50906-50925 | Msa1340700:CDS | 30.0% | |
TAAATCCATCCAATCTGTAA+TGG | + | tig0004309:50984-51003 | None:intergenic | 30.0% | |
! | TTACAGATTGGATGGATTTA+TGG | - | tig0004309:50984-51003 | Msa1340700:CDS | 30.0% |
! | GAAAACTAAAGTATCTTGAG+AGG | - | tig0004309:51210-51229 | Msa1340700:CDS | 30.0% |
TGAAGTGAATGGATAAACAA+TGG | + | tig0004309:51252-51271 | None:intergenic | 30.0% | |
ATGCTATCAACGCTTAATTA+AGG | + | tig0004309:51437-51456 | None:intergenic | 30.0% | |
AACAACTTATTAAGCTCTCT+AGG | + | tig0004309:51534-51553 | None:intergenic | 30.0% | |
!!! | CTCTAAAGGTCTATTTTGAT+TGG | + | tig0004309:51607-51626 | None:intergenic | 30.0% |
GAGAGTTATATCTCTTCAAA+TGG | - | tig0004309:52098-52117 | Msa1340700:intron | 30.0% | |
TTCAAGATTATAAGAGTGGT+TGG | + | tig0004309:52142-52161 | None:intergenic | 30.0% | |
AAGAATAGCTTCCCAAATAA+AGG | + | tig0004309:52226-52245 | None:intergenic | 30.0% | |
! | GAAGCTATTCTTTGCATTTT+GGG | - | tig0004309:52234-52253 | Msa1340700:CDS | 30.0% |
ATGAGAAAATTGATGCCAAA+AGG | + | tig0004309:52342-52361 | None:intergenic | 30.0% | |
!!! | TTTTCTCATTGATTTGGGTT+AGG | - | tig0004309:52353-52372 | Msa1340700:CDS | 30.0% |
! | GGAAAACATATTCAGAGTTT+TGG | - | tig0004309:52610-52629 | Msa1340700:CDS | 30.0% |
TGAGAAATGAGAATTAGAGC+CGG | + | tig0004309:47003-47022 | None:intergenic | 35.0% | |
GATGAAGATTTATTGGTAGG+AGG | + | tig0004309:47199-47218 | None:intergenic | 35.0% | |
TCGAAAATATGTCGAGTTTG+TGG | - | tig0004309:47217-47236 | Msa1340700:CDS | 35.0% | |
! | TGGTGATGAGATTGGATATA+AGG | - | tig0004309:47237-47256 | Msa1340700:CDS | 35.0% |
CTCCTTTCATACTCATAACA+AGG | + | tig0004309:47316-47335 | None:intergenic | 35.0% | |
TATGAGTATGAAAGGAGTGA+AGG | - | tig0004309:47319-47338 | Msa1340700:CDS | 35.0% | |
ATGAGTATGAAAGGAGTGAA+GGG | - | tig0004309:47320-47339 | Msa1340700:CDS | 35.0% | |
AAATACCGAATCAGATTGGA+CGG | + | tig0004309:47603-47622 | None:intergenic | 35.0% | |
CTTCAAAATCATCTCCATCA+AGG | + | tig0004309:47703-47722 | None:intergenic | 35.0% | |
TCATCATGATGATTCTTGAC+CGG | + | tig0004309:47734-47753 | None:intergenic | 35.0% | |
TTACCACATGATTAACATCG+CGG | + | tig0004309:47769-47788 | None:intergenic | 35.0% | |
!!! | TTGCATACTTTTTCTTCAGC+AGG | - | tig0004309:47929-47948 | Msa1340700:intron | 35.0% |
!!! | CTCTACTGTTTTCTAGTTAC+TGG | - | tig0004309:48041-48060 | Msa1340700:intron | 35.0% |
!!! | CTGTTTTCTAGTTACTGGAA+AGG | - | tig0004309:48046-48065 | Msa1340700:intron | 35.0% |
TCTAGTTACTGGAAAGGATT+TGG | - | tig0004309:48052-48071 | Msa1340700:intron | 35.0% | |
TTACTGGAAAGGATTTGGAA+GGG | - | tig0004309:48057-48076 | Msa1340700:intron | 35.0% | |
GGCAAGAAAGAGTAGAAAAA+TGG | - | tig0004309:48108-48127 | Msa1340700:intron | 35.0% | |
AAAGTAAGGCAAGAAAAGAG+AGG | - | tig0004309:48131-48150 | Msa1340700:intron | 35.0% | |
CATATGCAGGTGTTAAGATA+CGG | + | tig0004309:48422-48441 | None:intergenic | 35.0% | |
TTACTGATATGAGCCATAGA+GGG | + | tig0004309:48452-48471 | None:intergenic | 35.0% | |
ATTACTGATATGAGCCATAG+AGG | + | tig0004309:48453-48472 | None:intergenic | 35.0% | |
! | AAATATGGTTTGCACTGTCA+TGG | - | tig0004309:48478-48497 | Msa1340700:CDS | 35.0% |
TACTTGACCAGTTTCCAAAA+TGG | - | tig0004309:48502-48521 | Msa1340700:CDS | 35.0% | |
!! | TTGGTAACCATTTTGGAAAC+TGG | + | tig0004309:48512-48531 | None:intergenic | 35.0% |
ATAATAGGCGGTTCTTTCAA+AGG | + | tig0004309:48636-48655 | None:intergenic | 35.0% | |
!! | GTGTTTGCTGTTATAATAGG+CGG | + | tig0004309:48648-48667 | None:intergenic | 35.0% |
AGCATGTAACTTTCTCAACA+GGG | + | tig0004309:48698-48717 | None:intergenic | 35.0% | |
TAGCATGTAACTTTCTCAAC+AGG | + | tig0004309:48699-48718 | None:intergenic | 35.0% | |
ACATGCTATGTATCAGATGA+TGG | - | tig0004309:48711-48730 | Msa1340700:intron | 35.0% | |
CTTCTTTCCTTGACAAAAGT+AGG | + | tig0004309:48885-48904 | None:intergenic | 35.0% | |
!! | CTACTTTTGTCAAGGAAAGA+AGG | - | tig0004309:48883-48902 | Msa1340700:CDS | 35.0% |
GATGTTTATGTAAGCTATCC+TGG | - | tig0004309:49199-49218 | Msa1340700:CDS | 35.0% | |
CTAGTTTACATAAACTCTCC+AGG | + | tig0004309:49220-49239 | None:intergenic | 35.0% | |
AGACTCTTTCAGAGAGTTTA+TGG | + | tig0004309:49278-49297 | None:intergenic | 35.0% | |
!! | ACTTTTGTGTGTTTGTTGCA+TGG | - | tig0004309:49377-49396 | Msa1340700:CDS | 35.0% |
! | AATTAATGCTTTGGTGGCAA+AGG | - | tig0004309:49429-49448 | Msa1340700:CDS | 35.0% |
! | CACCTTATTTGCTAAGTGTT+TGG | - | tig0004309:49628-49647 | Msa1340700:intron | 35.0% |
TTGTGAAACGAAGCTGAAAA+GGG | + | tig0004309:49691-49710 | None:intergenic | 35.0% | |
GTTTCACAAGGTTACCATAA+TGG | - | tig0004309:49702-49721 | Msa1340700:CDS | 35.0% | |
GTGAAGTTTACACACTGATA+TGG | - | tig0004309:49754-49773 | Msa1340700:CDS | 35.0% | |
TTTCTTGTGATGTGGATAAC+CGG | + | tig0004309:49883-49902 | None:intergenic | 35.0% | |
! | TGAACTTACCAAAGCATTCA+TGG | + | tig0004309:49913-49932 | None:intergenic | 35.0% |
!! | TGTTTTTGTCTGTCCTCAAA+AGG | - | tig0004309:50005-50024 | Msa1340700:intron | 35.0% |
CAATCGAGATTCAACATGAA+TGG | + | tig0004309:50060-50079 | None:intergenic | 35.0% | |
TCACTACATCAACAATAGCA+AGG | - | tig0004309:50083-50102 | Msa1340700:CDS | 35.0% | |
! | CATCAAATCTCTGAGGAAAT+TGG | + | tig0004309:50170-50189 | None:intergenic | 35.0% |
CAATTTCCTCAGAGATTTGA+TGG | - | tig0004309:50168-50187 | Msa1340700:CDS | 35.0% | |
TCAATACCATCAAATCTCTG+AGG | + | tig0004309:50177-50196 | None:intergenic | 35.0% | |
ATCAATATGAAAGGGCTTGA+TGG | - | tig0004309:50328-50347 | Msa1340700:intron | 35.0% | |
! | TTCAACAGACAAGCATTGTA+TGG | - | tig0004309:50388-50407 | Msa1340700:intron | 35.0% |
CAACAATCACATGTCATCTT+TGG | + | tig0004309:50442-50461 | None:intergenic | 35.0% | |
CAAAGATGACATGTGATTGT+TGG | - | tig0004309:50440-50459 | Msa1340700:intron | 35.0% | |
CAACAAAAGCAACACCATTT+AGG | + | tig0004309:50466-50485 | None:intergenic | 35.0% | |
!!! | AAATGGTGTTGCTTTTGTTG+TGG | - | tig0004309:50466-50485 | Msa1340700:intron | 35.0% |
TACAAGAAGAAGAAAATGGG+AGG | - | tig0004309:50553-50572 | Msa1340700:intron | 35.0% | |
AATCTCTTCGAGATCAAACA+TGG | + | tig0004309:50608-50627 | None:intergenic | 35.0% | |
AGATTGAAGAAGGACTTGAA+GGG | - | tig0004309:50623-50642 | Msa1340700:intron | 35.0% | |
GCTTCAACTTTGATGGAAAA+TGG | - | tig0004309:50724-50743 | Msa1340700:CDS | 35.0% | |
TCAACTTTGATGGAAAATGG+AGG | - | tig0004309:50727-50746 | Msa1340700:CDS | 35.0% | |
AGGCACAAATACACAATCAT+TGG | - | tig0004309:50759-50778 | Msa1340700:CDS | 35.0% | |
GCCATTCATAACATAAGTTG+TGG | - | tig0004309:50790-50809 | Msa1340700:CDS | 35.0% | |
GCCACAACTTATGTTATGAA+TGG | + | tig0004309:50794-50813 | None:intergenic | 35.0% | |
! | GATTTTCTTGAAGCTTTGCT+TGG | - | tig0004309:50892-50911 | Msa1340700:CDS | 35.0% |
CTTTGCTTGGATATGAAACT+AGG | - | tig0004309:50905-50924 | Msa1340700:CDS | 35.0% | |
! | GTTTTCCATTACAGATTGGA+TGG | - | tig0004309:50976-50995 | Msa1340700:CDS | 35.0% |
!!! | GTCACAGAAGATATTTTGAC+TGG | - | tig0004309:51011-51030 | Msa1340700:CDS | 35.0% |
AACCTATCTGACAGATTGAT+AGG | + | tig0004309:51110-51129 | None:intergenic | 35.0% | |
! | ACTAAAGTATCTTGAGAGGT+TGG | - | tig0004309:51214-51233 | Msa1340700:CDS | 35.0% |
! | TTAAGGTGTTAGTCCAGATA+GGG | + | tig0004309:51420-51439 | None:intergenic | 35.0% |
! | ATTAAGGTGTTAGTCCAGAT+AGG | + | tig0004309:51421-51440 | None:intergenic | 35.0% |
AAACCAAATACTAGCAAGGT+TGG | + | tig0004309:51864-51883 | None:intergenic | 35.0% | |
! | CATCTTTTTGCAGTGTTTCA+AGG | - | tig0004309:52001-52020 | Msa1340700:intron | 35.0% |
AAGATTATAAGAGTGGTTGG+TGG | + | tig0004309:52139-52158 | None:intergenic | 35.0% | |
! | GGAAGCTATTCTTTGCATTT+TGG | - | tig0004309:52233-52252 | Msa1340700:CDS | 35.0% |
TCCTTTCCTTAAAGGTCTTA+TGG | - | tig0004309:52273-52292 | Msa1340700:CDS | 35.0% | |
! | CCTTTCCTTAAAGGTCTTAT+GGG | - | tig0004309:52274-52293 | Msa1340700:CDS | 35.0% |
! | GTTTTCCCATAAGACCTTTA+AGG | + | tig0004309:52282-52301 | None:intergenic | 35.0% |
GTCTTATGGGAAAACAAAAC+AGG | - | tig0004309:52287-52306 | Msa1340700:CDS | 35.0% | |
ACACCACATTGTTTGAGAAT+AGG | + | tig0004309:52409-52428 | None:intergenic | 35.0% | |
TTTCTCACATGACTCTGATG+AGG | - | tig0004309:47016-47035 | Msa1340700:three_prime_UTR | 40.0% | |
CCAACAAGACATTCTGATCA+TGG | + | tig0004309:47094-47113 | None:intergenic | 40.0% | |
CCATGATCAGAATGTCTTGT+TGG | - | tig0004309:47091-47110 | Msa1340700:three_prime_UTR | 40.0% | |
GAAGATTTATTGGTAGGAGG+AGG | + | tig0004309:47196-47215 | None:intergenic | 40.0% | |
! | GGAAAATGGAGAGCTTTTTG+TGG | - | tig0004309:47258-47277 | Msa1340700:CDS | 40.0% |
! | TTATAGCGAGTGTTGCATTG+AGG | + | tig0004309:47358-47377 | None:intergenic | 40.0% |
GATGAAGATGAGAACCTTGA+TGG | - | tig0004309:47686-47705 | Msa1340700:CDS | 40.0% | |
!! | ACTTTTTCTTCAGCAGGAAG+TGG | - | tig0004309:47935-47954 | Msa1340700:intron | 40.0% |
GTTACTGGAAAGGATTTGGA+AGG | - | tig0004309:48056-48075 | Msa1340700:intron | 40.0% | |
TACTGGAAAGGATTTGGAAG+GGG | - | tig0004309:48058-48077 | Msa1340700:intron | 40.0% | |
CTGAAGCAAGACAACCATTA+TGG | - | tig0004309:48307-48326 | Msa1340700:CDS | 40.0% | |
ATTGGAACTTTGCGCCATAA+TGG | + | tig0004309:48324-48343 | None:intergenic | 40.0% | |
CAGGTGTTAAGATACGGAAA+CGG | + | tig0004309:48416-48435 | None:intergenic | 40.0% | |
CATATGATGCATACCCTCTA+TGG | - | tig0004309:48436-48455 | Msa1340700:CDS | 40.0% | |
!! | CGTGTGATTGGTAACCATTT+TGG | + | tig0004309:48519-48538 | None:intergenic | 40.0% |
AAGTAAGTTTCGCGTGTGAT+TGG | + | tig0004309:48531-48550 | None:intergenic | 40.0% | |
AGGGTAGTCAACAGAAAGTA+TGG | + | tig0004309:48679-48698 | None:intergenic | 40.0% | |
! | AAACTTCTGAGTTTGCTCGA+AGG | - | tig0004309:48766-48785 | Msa1340700:intron | 40.0% |
CAAGGAAAGAAGGTCTATGA+AGG | - | tig0004309:48893-48912 | Msa1340700:CDS | 40.0% | |
TTATGCAAGATGGAACTCCA+TGG | - | tig0004309:49479-49498 | Msa1340700:CDS | 40.0% | |
!! | TAAGGTGCTATTGTTGTGTG+TGG | + | tig0004309:49615-49634 | None:intergenic | 40.0% |
CTTGTGAAACGAAGCTGAAA+AGG | + | tig0004309:49692-49711 | None:intergenic | 40.0% | |
! | CTTTTCAGCTTCGTTTCACA+AGG | - | tig0004309:49690-49709 | Msa1340700:intron | 40.0% |
TTACACACTGATATGGCTCA+TGG | - | tig0004309:49761-49780 | Msa1340700:CDS | 40.0% | |
!! | TTGGCTTTGCAGGTATACTT+AGG | - | tig0004309:49786-49805 | Msa1340700:CDS | 40.0% |
ATTTCACGTGAAAAACGTCC+CGG | - | tig0004309:49861-49880 | Msa1340700:intron | 40.0% | |
TTCTTGTGATGTGGATAACC+GGG | + | tig0004309:49882-49901 | None:intergenic | 40.0% | |
TATCCACATCACAAGAAAGC+CGG | - | tig0004309:49885-49904 | Msa1340700:intron | 40.0% | |
CAATAGCAAGGCTATTAGAG+AGG | - | tig0004309:50095-50114 | Msa1340700:CDS | 40.0% | |
! | TTCCTAATGGATCCTCAACT+TGG | - | tig0004309:50126-50145 | Msa1340700:CDS | 40.0% |
! | TCCTAATGGATCCTCAACTT+GGG | - | tig0004309:50127-50146 | Msa1340700:CDS | 40.0% |
! | AAAGGGCTTGATGGTATTCA+AGG | - | tig0004309:50337-50356 | Msa1340700:intron | 40.0% |
ATTCAAGGTCCAGTGTATGT+CGG | - | tig0004309:50352-50371 | Msa1340700:intron | 40.0% | |
TTGTCTGTTGAACACAGTTC+CGG | + | tig0004309:50380-50399 | None:intergenic | 40.0% | |
! | ATCCACCAGTTTCTGAGAAA+AGG | - | tig0004309:50416-50435 | Msa1340700:intron | 40.0% |
!! | TTTGGCCTTTTCTCAGAAAC+TGG | + | tig0004309:50424-50443 | None:intergenic | 40.0% |
! | CATGTGATTGTTGGCCTAAA+TGG | - | tig0004309:50449-50468 | Msa1340700:intron | 40.0% |
!!! | GTTGCTTTTGTTGTGGTTCA+AGG | - | tig0004309:50473-50492 | Msa1340700:intron | 40.0% |
GAAGAAGAAAATGGGAGGAA+AGG | - | tig0004309:50558-50577 | Msa1340700:intron | 40.0% | |
GATCTCGAAGAGATTGAAGA+AGG | - | tig0004309:50613-50632 | Msa1340700:intron | 40.0% | |
GAGATTGAAGAAGGACTTGA+AGG | - | tig0004309:50622-50641 | Msa1340700:intron | 40.0% | |
GATTGTGTATTTGTGCCTTC+AGG | + | tig0004309:50757-50776 | None:intergenic | 40.0% | |
CTATGAAGAGAAGACTGACT+GGG | - | tig0004309:50813-50832 | Msa1340700:CDS | 40.0% | |
TATGAAGAGAAGACTGACTG+GGG | - | tig0004309:50814-50833 | Msa1340700:CDS | 40.0% | |
CAGTATATTGCATGCCAAAG+AGG | - | tig0004309:51063-51082 | Msa1340700:CDS | 40.0% | |
CACCTATCAATCTGTCAGAT+AGG | - | tig0004309:51105-51124 | Msa1340700:CDS | 40.0% | |
AGCAAAGGGATTGAAGTGAA+TGG | + | tig0004309:51263-51282 | None:intergenic | 40.0% | |
TTGTGCAGTATGCAAGCAAA+GGG | + | tig0004309:51277-51296 | None:intergenic | 40.0% | |
ATTGTGCAGTATGCAAGCAA+AGG | + | tig0004309:51278-51297 | None:intergenic | 40.0% | |
GAATGATGAACTTTCCAGTG+AGG | + | tig0004309:51316-51335 | None:intergenic | 40.0% | |
GATAGAGGTGAACTTACAGT+AGG | + | tig0004309:51338-51357 | None:intergenic | 40.0% | |
AGTTAGAGCAACCTCAATTG+AGG | + | tig0004309:51704-51723 | None:intergenic | 40.0% | |
TGACCAACCTTGCTAGTATT+TGG | - | tig0004309:51858-51877 | Msa1340700:CDS | 40.0% | |
! | GAGTACACCGGTTAAAATGA+TGG | + | tig0004309:51903-51922 | None:intergenic | 40.0% |
GTCTCTGATGCTATTAACAG+TGG | - | tig0004309:52184-52203 | Msa1340700:intron | 40.0% | |
GATGCTATTAACAGTGGTAG+TGG | - | tig0004309:52190-52209 | Msa1340700:intron | 40.0% | |
!! | TTAACAGTGGTAGTGGTTCA+TGG | - | tig0004309:52197-52216 | Msa1340700:intron | 40.0% |
!! | TAACAGTGGTAGTGGTTCAT+GGG | - | tig0004309:52198-52217 | Msa1340700:intron | 40.0% |
! | GTTCATGGGGACCTTTATTT+GGG | - | tig0004309:52212-52231 | Msa1340700:intron | 40.0% |
! | CCCATAAGACCTTTAAGGAA+AGG | + | tig0004309:52277-52296 | None:intergenic | 40.0% |
AAACAGGACTCCTACTATTG+TGG | - | tig0004309:52303-52322 | Msa1340700:CDS | 40.0% | |
CTCCTACTATTGTGGTACTT+TGG | - | tig0004309:52311-52330 | Msa1340700:CDS | 40.0% | |
! | GACCAAAGTACCACAATAGT+AGG | + | tig0004309:52316-52335 | None:intergenic | 40.0% |
! | GGTACTTTGGTCAATCCTTT+TGG | - | tig0004309:52324-52343 | Msa1340700:CDS | 40.0% |
! | AGAATAGGACCAGTTTGCTT+AGG | + | tig0004309:52394-52413 | None:intergenic | 40.0% |
GGTCCTATTCTCAAACAATG+TGG | - | tig0004309:52403-52422 | Msa1340700:CDS | 40.0% | |
ATGCTGAGAAGTTGTGAAAG+AGG | - | tig0004309:52432-52451 | Msa1340700:intron | 40.0% | |
! | CGAGTTTGTGGTGATGAGAT+TGG | - | tig0004309:47229-47248 | Msa1340700:CDS | 45.0% |
ACTCGCTATAAGCGCCATAA+AGG | - | tig0004309:47367-47386 | Msa1340700:CDS | 45.0% | |
CTCATCCGTCCAATCTGATT+CGG | - | tig0004309:47595-47614 | Msa1340700:CDS | 45.0% | |
TCTTCATCTCCAACCACTCT+TGG | + | tig0004309:47674-47693 | None:intergenic | 45.0% | |
CATGATTAACATCGCGGTTC+TGG | + | tig0004309:47763-47782 | None:intergenic | 45.0% | |
GAACCGCGATGTTAATCATG+TGG | - | tig0004309:47763-47782 | Msa1340700:intron | 45.0% | |
GAGGATGGTAAAGAAGACCA+AGG | - | tig0004309:48167-48186 | Msa1340700:intron | 45.0% | |
GGTACTCATCTTCTTCACCT+TGG | + | tig0004309:48187-48206 | None:intergenic | 45.0% | |
GGAAACGGAAGAAGAAAGCT+AGG | + | tig0004309:48401-48420 | None:intergenic | 45.0% | |
! | AGAGGGTATGCATCATATGC+AGG | + | tig0004309:48435-48454 | None:intergenic | 45.0% |
AAACATCAACAGGCGAAAGC+TGG | + | tig0004309:48596-48615 | None:intergenic | 45.0% | |
! | TTCTGAGTTTGCTCGAAGGT+GGG | - | tig0004309:48770-48789 | Msa1340700:intron | 45.0% |
AAGTAATACTCAGGTGCCCT+TGG | + | tig0004309:48825-48844 | None:intergenic | 45.0% | |
!! | GGTTGAGCCTACTTTTGTCA+AGG | - | tig0004309:48875-48894 | Msa1340700:CDS | 45.0% |
CTCTCATAGACACTAAGTGC+TGG | + | tig0004309:49347-49366 | None:intergenic | 45.0% | |
!! | AAAGGCTCTGAAGAAACCTG+AGG | - | tig0004309:49447-49466 | Msa1340700:CDS | 45.0% |
! | TGATCACGAGTGTTGTTACC+AGG | + | tig0004309:49505-49524 | None:intergenic | 45.0% |
AACAACACTCGTGATCATCC+AGG | - | tig0004309:49508-49527 | Msa1340700:CDS | 45.0% | |
ACAACACTCGTGATCATCCA+GGG | - | tig0004309:49509-49528 | Msa1340700:CDS | 45.0% | |
TGATCATCCAGGGATGATTC+AGG | - | tig0004309:49519-49538 | Msa1340700:CDS | 45.0% | |
! | ATCCAGGGATGATTCAGGTT+TGG | - | tig0004309:49524-49543 | Msa1340700:CDS | 45.0% |
ACTGATATGGCTCATGGACT+TGG | - | tig0004309:49767-49786 | Msa1340700:CDS | 45.0% | |
! | CAGGTATACTTAGGAAGTGC+TGG | - | tig0004309:49795-49814 | Msa1340700:CDS | 45.0% |
! | TACCAAAGCATTCATGGCAC+CGG | + | tig0004309:49907-49926 | None:intergenic | 45.0% |
! | GCAGAAACTCGAACCTTTTG+AGG | + | tig0004309:50021-50040 | None:intergenic | 45.0% |
! | AGGATCCATTAGGAAGCACA+TGG | + | tig0004309:50121-50140 | None:intergenic | 45.0% |
! | TCCCAAGTTGAGGATCCATT+AGG | + | tig0004309:50131-50150 | None:intergenic | 45.0% |
CAGAGTTTCTTCCCAAGTTG+AGG | + | tig0004309:50141-50160 | None:intergenic | 45.0% | |
GAAAATGGAGGACTTCCTGA+AGG | - | tig0004309:50739-50758 | Msa1340700:CDS | 45.0% | |
GCTATGAAGAGAAGACTGAC+TGG | - | tig0004309:50812-50831 | Msa1340700:CDS | 45.0% | |
! | GGATTTAAGATGCACTGCAG+AGG | - | tig0004309:51032-51051 | Msa1340700:CDS | 45.0% |
TTAAGATGCACTGCAGAGGA+TGG | - | tig0004309:51036-51055 | Msa1340700:CDS | 45.0% | |
ATAGGTTGCACCAAGTTCTG+AGG | - | tig0004309:51123-51142 | Msa1340700:CDS | 45.0% | |
AACCATACCACAACGGACAA+TGG | + | tig0004309:51184-51203 | None:intergenic | 45.0% | |
TGTCCGTTGTGGTATGGTTA+TGG | - | tig0004309:51185-51204 | Msa1340700:CDS | 45.0% | |
CCTCCATAACCATACCACAA+CGG | + | tig0004309:51191-51210 | None:intergenic | 45.0% | |
AATGTCTATGGCCGCAATCT+AGG | - | tig0004309:51635-51654 | Msa1340700:intron | 45.0% | |
TGATACTGCGACCTAGATTG+CGG | + | tig0004309:51649-51668 | None:intergenic | 45.0% | |
CAATCTAGGTCGCAGTATCA+AGG | - | tig0004309:51649-51668 | Msa1340700:intron | 45.0% | |
GTGGAGAAACGAGCAATTCT+GGG | - | tig0004309:51958-51977 | Msa1340700:intron | 45.0% | |
AACGAGCAATTCTGGGTGAT+TGG | - | tig0004309:51965-51984 | Msa1340700:intron | 45.0% | |
! | GGTTTCCTCAAAGTTCTAGC+TGG | - | tig0004309:52022-52041 | Msa1340700:intron | 45.0% |
CTACTCCAGCTAGAACTTTG+AGG | + | tig0004309:52030-52049 | None:intergenic | 45.0% | |
GCAGCAGATGATGCTGAATT+CGG | - | tig0004309:52076-52095 | Msa1340700:intron | 45.0% | |
AACATTGTTGGCGTTGTTGC+TGG | - | tig0004309:52160-52179 | Msa1340700:intron | 45.0% | |
!! | AACAGTGGTAGTGGTTCATG+GGG | - | tig0004309:52199-52218 | Msa1340700:intron | 45.0% |
GGTTCATGGGGACCTTTATT+TGG | - | tig0004309:52211-52230 | Msa1340700:intron | 45.0% | |
! | CCAGTTTGCTTAGGCAAGAA+AGG | + | tig0004309:52385-52404 | None:intergenic | 45.0% |
CCTTTCTTGCCTAAGCAAAC+TGG | - | tig0004309:52382-52401 | Msa1340700:CDS | 45.0% | |
! | CTTTGGCTTCTTGCCATCCA+TGG | - | tig0004309:46950-46969 | Msa1340700:three_prime_UTR | 50.0% |
ATGGTGTTTGTGGCCATGGA+TGG | + | tig0004309:46966-46985 | None:intergenic | 50.0% | |
ATCCATGGCCACAAACACCA+TGG | - | tig0004309:46965-46984 | Msa1340700:three_prime_UTR | 50.0% | |
! | GATGATGATGACTTCCCTGC+AGG | - | tig0004309:47644-47663 | Msa1340700:CDS | 50.0% |
GAGAGGTCTGCTGAACAAAG+AGG | - | tig0004309:48148-48167 | Msa1340700:intron | 50.0% | |
GGTCTGCTGAACAAAGAGGA+TGG | - | tig0004309:48152-48171 | Msa1340700:intron | 50.0% | |
TCAACAGGCGAAAGCTGGTT+TGG | + | tig0004309:48591-48610 | None:intergenic | 50.0% | |
! | CTTCTGAGTTTGCTCGAAGG+TGG | - | tig0004309:48769-48788 | Msa1340700:intron | 50.0% |
!! | GCTCTGAAGAAACCTGAGGA+GGG | - | tig0004309:49451-49470 | Msa1340700:CDS | 50.0% |
TGAAGAAACCTGAGGAGGGT+TGG | - | tig0004309:49455-49474 | Msa1340700:CDS | 50.0% | |
GAAGAAACCTGAGGAGGGTT+GGG | - | tig0004309:49456-49475 | Msa1340700:CDS | 50.0% | |
GAGGGTTGGGTTATGCAAGA+TGG | - | tig0004309:49469-49488 | Msa1340700:CDS | 50.0% | |
AGCCAAACCTGAATCATCCC+TGG | + | tig0004309:49529-49548 | None:intergenic | 50.0% | |
AGAGGCCATGTGCTTCCTAA+TGG | - | tig0004309:50113-50132 | Msa1340700:CDS | 50.0% | |
! | GGCCTTTTCTCAGAAACTGG+TGG | + | tig0004309:50421-50440 | None:intergenic | 50.0% |
! | AGAAGGACTTGAAGGGTACG+AGG | - | tig0004309:50630-50649 | Msa1340700:intron | 50.0% |
GAAGACTGACTGGGGAAAAG+AGG | - | tig0004309:50822-50841 | Msa1340700:CDS | 50.0% | |
CCAAAGAGGCCTGCTTTCAA+GGG | - | tig0004309:51077-51096 | Msa1340700:CDS | 50.0% | |
CAAAGAGGCCTGCTTTCAAG+GGG | - | tig0004309:51078-51097 | Msa1340700:CDS | 50.0% | |
!! | GTTGCACCAAGTTCTGAGGT+GGG | - | tig0004309:51127-51146 | Msa1340700:CDS | 50.0% |
CTAAAGCCCACCTCAGAACT+TGG | + | tig0004309:51136-51155 | None:intergenic | 50.0% | |
!! | CAAGTTCTGAGGTGGGCTTT+AGG | - | tig0004309:51134-51153 | Msa1340700:CDS | 50.0% |
ACAACGGACAATGGCGACTA+AGG | + | tig0004309:51175-51194 | None:intergenic | 50.0% | |
TTAGTCGCCATTGTCCGTTG+TGG | - | tig0004309:51174-51193 | Msa1340700:CDS | 50.0% | |
CCGTTGTGGTATGGTTATGG+AGG | - | tig0004309:51188-51207 | Msa1340700:CDS | 50.0% | |
GACACATAACACGCCCTATC+TGG | - | tig0004309:51404-51423 | Msa1340700:intron | 50.0% | |
CCTCAATTGAGGTTGCGTTG+CGG | + | tig0004309:51693-51712 | None:intergenic | 50.0% | |
GGTGGAGAAACGAGCAATTC+TGG | - | tig0004309:51957-51976 | Msa1340700:intron | 50.0% | |
GAGCAATTCTGGGTGATTGG+AGG | - | tig0004309:51968-51987 | Msa1340700:intron | 50.0% | |
AGCCATGGTGTTTGTGGCCA+TGG | + | tig0004309:46970-46989 | None:intergenic | 55.0% | |
ATGGCCACAAACACCATGGC+TGG | - | tig0004309:46969-46988 | Msa1340700:three_prime_UTR | 55.0% | |
CAAGCCAGCCATGGTGTTTG+TGG | + | tig0004309:46976-46995 | None:intergenic | 55.0% | |
!! | ACCATGGCTGGCTTGATCAC+CGG | - | tig0004309:46981-47000 | Msa1340700:three_prime_UTR | 55.0% |
CCACTCTTGGACAACCTGCA+GGG | + | tig0004309:47661-47680 | None:intergenic | 55.0% | |
ACCACTCTTGGACAACCTGC+AGG | + | tig0004309:47662-47681 | None:intergenic | 55.0% | |
GCAGGTTGTCCAAGAGTGGT+TGG | - | tig0004309:47662-47681 | Msa1340700:CDS | 55.0% | |
!! | GGCTCTGAAGAAACCTGAGG+AGG | - | tig0004309:49450-49469 | Msa1340700:CDS | 55.0% |
TGCATAACCCAACCCTCCTC+AGG | + | tig0004309:49466-49485 | None:intergenic | 55.0% | |
CAAGATGGAACTCCATGGCC+TGG | - | tig0004309:49484-49503 | Msa1340700:CDS | 55.0% | |
! | CGAGTGTTGTTACCAGGCCA+TGG | + | tig0004309:49499-49518 | None:intergenic | 55.0% |
!! | GCTCATGGACTTGGCTTTGC+AGG | - | tig0004309:49776-49795 | Msa1340700:CDS | 55.0% |
!! | AAGTGCTGGTGCACTAGACG+TGG | - | tig0004309:49809-49828 | Msa1340700:intron | 55.0% |
TGCACTAGACGTGGAAGGCA+AGG | - | tig0004309:49818-49837 | Msa1340700:intron | 55.0% | |
!! | GCACCGGCTTTCTTGTGATG+TGG | + | tig0004309:49891-49910 | None:intergenic | 55.0% |
!! | AGCCGGTGCCATGAATGCTT+TGG | - | tig0004309:49902-49921 | Msa1340700:intron | 55.0% |
GGTCCAGTGTATGTCGGTAC+CGG | - | tig0004309:50358-50377 | Msa1340700:intron | 55.0% | |
!! | GTTCCGGTACCGACATACAC+TGG | + | tig0004309:50364-50383 | None:intergenic | 55.0% |
!! | GAAGCGATTCGGTCAGTCTC+CGG | - | tig0004309:50693-50712 | Msa1340700:intron | 55.0% |
GCCAAAGAGGCCTGCTTTCA+AGG | - | tig0004309:51076-51095 | Msa1340700:CDS | 55.0% | |
CCCTTGAAAGCAGGCCTCTT+TGG | + | tig0004309:51080-51099 | None:intergenic | 55.0% | |
!! | GGTTGCACCAAGTTCTGAGG+TGG | - | tig0004309:51126-51145 | Msa1340700:CDS | 55.0% |
CGCCATTGTCCGTTGTGGTA+TGG | - | tig0004309:51179-51198 | Msa1340700:CDS | 55.0% | |
CCGCAACGCAACCTCAATTG+AGG | - | tig0004309:51690-51709 | Msa1340700:CDS | 55.0% | |
CCATCGAAGCTCGAGTACAC+CGG | + | tig0004309:51915-51934 | None:intergenic | 55.0% | |
GTACTCGAGCTTCGATGGAG+TGG | - | tig0004309:51917-51936 | Msa1340700:CDS | 55.0% | |
GTGGAGTTGCGATCGAAGAC+TGG | - | tig0004309:51936-51955 | Msa1340700:intron | 55.0% | |
GAGTTGCGATCGAAGACTGG+TGG | - | tig0004309:51939-51958 | Msa1340700:intron | 55.0% | |
CCCTGCAGGTTGTCCAAGAG+TGG | - | tig0004309:47658-47677 | Msa1340700:CDS | 60.0% | |
GCTGGTGCACTAGACGTGGA+AGG | - | tig0004309:49813-49832 | Msa1340700:intron | 60.0% | |
GGTGCAGACCCCTTGAAAGC+AGG | + | tig0004309:51089-51108 | None:intergenic | 60.0% | |
CCAGTGAGGAGACACACAGC+TGG | + | tig0004309:51302-51321 | None:intergenic | 60.0% | |
CCAGCTGTGTGTCTCCTCAC+TGG | - | tig0004309:51299-51318 | Msa1340700:intron | 60.0% | |
CCGGTGTACTCGAGCTTCGA+TGG | - | tig0004309:51912-51931 | Msa1340700:CDS | 60.0% | |
GCCGGTGATCAAGCCAGCCA+TGG | + | tig0004309:46985-47004 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0004309 | gene | 46884 | 52730 | 46884 | ID=Msa1340700;Name=Msa1340700 |
tig0004309 | mRNA | 46884 | 52730 | 46884 | ID=Msa1340700-mRNA-1;Parent=Msa1340700;Name=Msa1340700-mRNA-1;_AED=0.05;_eAED=0.05;_QI=85|1|1|1|1|1|12|292|1044 |
tig0004309 | exon | 46884 | 47757 | 46884 | ID=Msa1340700-mRNA-1:exon:2807;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 48274 | 48624 | 48274 | ID=Msa1340700-mRNA-1:exon:2806;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 48771 | 49286 | 48771 | ID=Msa1340700-mRNA-1:exon:2805;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 49375 | 49587 | 49375 | ID=Msa1340700-mRNA-1:exon:2804;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 49691 | 49816 | 49691 | ID=Msa1340700-mRNA-1:exon:2803;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 50074 | 50211 | 50074 | ID=Msa1340700-mRNA-1:exon:2802;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 50700 | 51312 | 50700 | ID=Msa1340700-mRNA-1:exon:2801;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 51407 | 51557 | 51407 | ID=Msa1340700-mRNA-1:exon:2800;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 51658 | 51712 | 51658 | ID=Msa1340700-mRNA-1:exon:2799;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 51830 | 51948 | 51830 | ID=Msa1340700-mRNA-1:exon:2798;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 52226 | 52427 | 52226 | ID=Msa1340700-mRNA-1:exon:2797;Parent=Msa1340700-mRNA-1 |
tig0004309 | exon | 52577 | 52730 | 52577 | ID=Msa1340700-mRNA-1:exon:2796;Parent=Msa1340700-mRNA-1 |
tig0004309 | five_prime_UTR | 52646 | 52730 | 52646 | ID=Msa1340700-mRNA-1:five_prime_utr;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 52577 | 52645 | 52577 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 52226 | 52427 | 52226 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 51830 | 51948 | 51830 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 51658 | 51712 | 51658 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 51407 | 51557 | 51407 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 50700 | 51312 | 50700 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 50074 | 50211 | 50074 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 49691 | 49816 | 49691 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 49375 | 49587 | 49375 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 48771 | 49286 | 48771 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 48274 | 48624 | 48274 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | CDS | 47176 | 47757 | 47176 | ID=Msa1340700-mRNA-1:cds;Parent=Msa1340700-mRNA-1 |
tig0004309 | three_prime_UTR | 46884 | 47175 | 46884 | ID=Msa1340700-mRNA-1:three_prime_utr;Parent=Msa1340700-mRNA-1 |
Gene Sequence |
Protein sequence |