AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0590780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0590780 MtrunA17_Chr4g0008511 48.871 487 140 10 8 418 6 459 5.77e-135 396
Msa0590780 MtrunA17_Chr4g0008511 26.201 229 134 8 6 216 260 471 1.47e-11 66.2
Msa0590780 MtrunA17_Chr4g0008491 58.383 334 75 4 87 418 2 273 4.84e-110 326
Msa0590780 MtrunA17_Chr4g0007341 32.981 473 219 16 9 418 12 449 3.13e-59 200
Msa0590780 MtrunA17_Chr4g0007631 35.342 365 186 12 1 349 1 331 1.56e-57 197
Msa0590780 MtrunA17_Chr4g0007631 27.311 238 121 9 10 216 267 483 2.34e-13 71.6
Msa0590780 MtrunA17_Chr4g0008481 35.467 375 179 11 1 349 1 338 5.05e-56 193
Msa0590780 MtrunA17_Chr4g0008481 30.131 229 124 9 10 216 274 488 3.83e-18 86.7
Msa0590780 MtrunA17_Chr7g0241261 31.486 451 216 12 10 418 9 408 4.44e-55 188
Msa0590780 MtrunA17_Chr1g0166321 30.512 449 247 11 10 418 14 437 3.67e-52 182
Msa0590780 MtrunA17_Chr7g0241251 30.649 447 237 10 10 418 12 423 7.92e-52 180
Msa0590780 MtrunA17_Chr7g0239911 35.083 362 182 8 1 352 1 319 1.33e-51 179
Msa0590780 MtrunA17_Chr4g0007271 34.865 370 148 9 1 349 1 298 6.74e-51 178
Msa0590780 MtrunA17_Chr4g0007271 25.862 232 136 6 9 216 233 452 1.88e-16 81.3
Msa0590780 MtrunA17_Chr7g0241421 35.977 353 168 9 13 352 17 324 6.84e-51 180
Msa0590780 MtrunA17_Chr7g0237451 31.978 369 174 9 2 352 4 313 2.52e-47 168
Msa0590780 MtrunA17_Chr7g0239731 33.512 373 198 8 6 371 5 334 1.31e-46 166
Msa0590780 MtrunA17_Chr7g0239901 34.463 354 180 8 8 352 36 346 1.71e-46 167
Msa0590780 MtrunA17_Chr7g0239891 31.211 487 246 14 2 418 3 470 8.49e-46 165
Msa0590780 MtrunA17_Chr7g0238971 28.958 480 230 12 6 418 8 443 3.36e-45 162
Msa0590780 MtrunA17_Chr3g0078631 31.398 465 216 12 3 418 15 425 6.47e-44 159
Msa0590780 MtrunA17_Chr4g0007251 31.006 358 172 7 9 349 13 312 5.38e-43 157
Msa0590780 MtrunA17_Chr4g0007251 28.111 217 118 8 21 216 259 458 2.08e-11 65.5
Msa0590780 MtrunA17_Chr7g0239841 33.516 364 177 11 1 347 1 316 8.04e-43 155
Msa0590780 MtrunA17_Chr7g0239921 28.512 484 232 13 2 418 29 465 9.80e-43 156
Msa0590780 MtrunA17_Chr7g0241201 33.702 362 191 8 10 357 15 341 2.65e-41 150
Msa0590780 MtrunA17_Chr7g0238961 31.367 373 203 8 8 359 263 603 5.23e-41 154
Msa0590780 MtrunA17_Chr7g0238961 41.463 123 68 1 1 123 1 119 1.14e-22 100
Msa0590780 MtrunA17_Chr7g0239851 32.240 366 189 11 1 352 1 321 1.32e-40 150
Msa0590780 MtrunA17_Chr7g0241331 31.880 367 192 10 10 357 4 331 2.39e-40 150
Msa0590780 MtrunA17_Chr7g0239831 34.865 370 164 13 1 347 1 316 6.57e-40 148
Msa0590780 MtrunA17_Chr4g0007231 37.339 233 127 10 1 217 1 230 2.12e-39 141
Msa0590780 MtrunA17_Chr7g0241431 30.595 353 153 10 16 347 1 282 3.51e-38 143
Msa0590780 MtrunA17_Chr7g0241271 31.609 348 189 9 13 347 17 328 1.11e-34 131
Msa0590780 MtrunA17_Chr7g0241161 39.548 177 93 5 10 178 15 185 3.32e-27 112
Msa0590780 MtrunA17_Chr7g0241161 33.178 214 104 8 240 416 184 395 7.90e-21 94.0
Msa0590780 MtrunA17_Chr2g0291981 46.087 115 58 2 10 124 14 124 5.22e-27 105
Msa0590780 MtrunA17_Chr7g0218371 42.604 169 82 6 10 171 14 174 1.96e-26 110
Msa0590780 MtrunA17_Chr7g0218371 36.641 131 66 3 238 357 168 292 1.97e-14 74.7
Msa0590780 MtrunA17_Chr7g0241311 31.878 229 134 8 1 213 1 223 3.81e-26 105
Msa0590780 MtrunA17_Chr7g0241291 27.632 304 150 8 159 418 9 286 8.64e-24 101
Msa0590780 MtrunA17_Chr7g0241231 40.268 149 74 4 10 149 7 149 2.24e-23 95.5
Msa0590780 MtrunA17_Chr7g0241361 30.147 272 132 7 10 279 16 231 4.00e-23 97.8
Msa0590780 MtrunA17_Chr7g0239761 29.538 325 143 10 1 312 20 271 6.36e-23 98.2
Msa0590780 MtrunA17_Chr7g0241351 32.367 207 128 4 10 212 16 214 7.59e-23 96.3
Msa0590780 MtrunA17_Chr7g0241511 26.791 321 131 8 161 418 17 296 5.94e-22 96.7
Msa0590780 MtrunA17_Chr7g0239751 33.040 227 111 6 8 218 30 231 1.06e-21 93.2
Msa0590780 MtrunA17_Chr4g0007321 29.730 259 99 7 236 418 7 258 2.88e-20 90.5
Msa0590780 MtrunA17_Chr4g0007321 29.870 231 116 9 10 216 61 269 3.27e-17 81.6
Msa0590780 MtrunA17_Chr7g0241211 32.919 161 79 3 286 418 1 160 1.60e-17 80.5
Msa0590780 MtrunA17_Chr7g0239861 30.435 276 135 10 91 358 26 252 1.96e-17 83.6
Msa0590780 MtrunA17_Chr1g0212741 28.384 229 132 8 2 210 3 219 3.91e-16 77.4
Msa0590780 MtrunA17_Chr7g0237481 50.746 67 33 0 286 352 15 81 2.26e-15 73.9
Msa0590780 MtrunA17_Chr7g0229201 29.565 230 130 8 1 210 1 218 9.63e-15 73.6
Msa0590780 MtrunA17_Chr0c02g0489781 29.565 230 130 8 1 210 1 218 9.63e-15 73.6
Msa0590780 MtrunA17_Chr1g0150211 45.946 74 38 1 286 357 1 74 4.65e-14 69.3
Msa0590780 MtrunA17_Chr8g0355351 26.906 223 132 6 10 216 13 220 5.64e-14 71.2
Msa0590780 MtrunA17_Chr7g0241181 43.011 93 53 0 288 380 17 109 2.81e-13 66.2
Msa0590780 MtrunA17_Chr4g0007221 29.348 184 76 4 286 418 10 190 3.20e-13 68.9
Msa0590780 MtrunA17_Chr1g0212761 30.872 149 79 5 10 151 7 138 6.32e-13 65.9
Msa0590780 MtrunA17_Chr7g0241301 31.034 116 52 2 10 123 12 101 1.10e-12 64.7
Msa0590780 MtrunA17_Chr7g0239791 34.615 130 77 3 224 347 3 130 7.78e-12 65.5
Msa0590780 MtrunA17_Chr7g0263461 54.902 51 23 0 8 58 37 87 9.82e-12 60.8
Msa0590780 MtrunA17_Chr4g0007311 31.646 158 87 7 93 245 1 142 1.20e-11 62.4
Msa0590780 MtrunA17_Chr1g0212771 27.551 196 102 6 10 175 9 194 2.12e-11 63.2
Msa0590780 MtrunA17_Chr7g0229211 38.202 89 45 2 10 97 8 87 3.56e-11 63.5
Msa0590780 MtrunA17_Chr1g0212781 35.106 94 52 1 10 103 6 90 6.60e-11 63.9
Msa0590780 MtrunA17_Chr8g0345251 30.000 160 105 3 238 391 110 268 9.51e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0590780 AT3G09110.1 34.195 348 182 7 10 347 9 319 5.76e-50 172
Msa0590780 AT5G01120.1 34.384 349 182 6 13 346 12 328 1.15e-49 176
Msa0590780 AT3G09140.1 31.301 492 248 14 9 418 8 491 1.39e-46 168
Msa0590780 AT3G09120.1 32.849 344 183 6 9 339 5 313 3.75e-45 159
Msa0590780 AT3G09140.2 30.346 491 226 14 9 418 8 463 6.52e-45 163
Msa0590780 AT5G01150.1 33.711 353 187 11 8 347 7 325 1.34e-43 159
Msa0590780 AT5G01130.1 31.448 442 232 12 8 415 7 411 5.60e-41 151
Msa0590780 AT5G01140.1 28.602 465 222 11 8 415 7 418 1.82e-39 147
Msa0590780 AT5G43240.1 33.428 353 187 8 11 347 10 330 3.83e-37 142
Msa0590780 AT5G43240.3 33.428 353 187 8 11 347 10 330 3.83e-37 142
Msa0590780 AT5G43240.4 33.428 353 187 8 11 347 10 330 3.83e-37 142
Msa0590780 AT5G37320.1 26.652 469 228 20 20 414 19 445 3.27e-28 116

Find 70 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGTGTTTAGTATTTATTC+TGG 0.088819 4_2:-14490449 Msa0590780:CDS
CATGGTGGATTTATTCAAAT+TGG 0.222313 4_2:-14490138 Msa0590780:intron
CAATATACCATTGGATGATT+TGG 0.259092 4_2:-14488551 Msa0590780:CDS
GATTTGTTGTGAGAAATTTA+TGG 0.293308 4_2:-14490423 Msa0590780:CDS
TCCTCTGAGTGATGTATTCT+TGG 0.319063 4_2:-14489016 Msa0590780:CDS
GTGTGTTTAGTATTTATTCT+GGG 0.332688 4_2:-14490448 Msa0590780:CDS
AATCATCCACATTCAACTTC+AGG 0.334699 4_2:+14490513 None:intergenic
AAAGTGCTTCAAAGCTTTCC+TGG 0.336987 4_2:-14490308 Msa0590780:CDS
AAAACTACCATTGACACTTT+TGG 0.338647 4_2:-14490807 Msa0590780:CDS
GTGTGGAAAATTTCAGTGAT+AGG 0.349892 4_2:-14490607 Msa0590780:CDS
TTGTGAGAAATTTATGGTTC+AGG 0.367812 4_2:-14490417 Msa0590780:CDS
CCACATTCAACTTCAGGTTC+TGG 0.377519 4_2:+14490519 None:intergenic
TTCCATTAGGAACCATCATT+AGG 0.393853 4_2:-14490706 Msa0590780:CDS
ATAATAATGTGGAGGTCTTA+AGG 0.398414 4_2:+14488960 None:intergenic
AATGTGCATCATAGAGGTTT+TGG 0.399001 4_2:-14490389 Msa0590780:CDS
CCAATTGTTTCTTCTTGTGA+TGG 0.399719 4_2:+14490653 None:intergenic
TTAAGGAGAAAGGGTACAAT+AGG 0.401192 4_2:+14488977 None:intergenic
ATTTACTTACTGTTACCTTA+AGG 0.401448 4_2:+14488911 None:intergenic
TCAATCCTTCATGTTTCATA+AGG 0.411494 4_2:-14488735 Msa0590780:CDS
ATCCTAATGATGGTTCCTAA+TGG 0.418326 4_2:+14490704 None:intergenic
CTTACAAGTGAAGTACTTTG+TGG 0.426269 4_2:+14490484 None:intergenic
TTTGAGGCAAAATCTCCATA+TGG 0.437503 4_2:-14488691 Msa0590780:CDS
TGTTTCTGTAACCAAGTTGT+TGG 0.453923 4_2:+14490267 None:intergenic
TTGTCTACCAAAAGTGTCAA+TGG 0.460192 4_2:+14490800 None:intergenic
ACTTCACTTGTAAGATCTGC+GGG 0.463855 4_2:-14490475 Msa0590780:CDS
CAACTTCAGGTTCTGGCAAA+GGG 0.465388 4_2:+14490526 None:intergenic
TGCTCTAGAACTGATCCAAC+AGG 0.472921 4_2:+14488817 None:intergenic
CTTAGACACAATCCTAATGA+TGG 0.477121 4_2:+14490694 None:intergenic
TACTACTATTATGAACCTTA+AGG 0.477721 4_2:-14488926 Msa0590780:CDS
CTTCAGCAACTCCAACAACT+TGG 0.486952 4_2:-14490278 Msa0590780:CDS
TGTGGAGGTCTTAAGGAGAA+AGG 0.491558 4_2:+14488967 None:intergenic
CCATCACAAGAAGAAACAAT+TGG 0.491894 4_2:-14490653 Msa0590780:CDS
AAGTGCTTCAAAGCTTTCCT+GGG 0.495084 4_2:-14490307 Msa0590780:CDS
TTACAAGTGAAGTACTTTGT+GGG 0.496614 4_2:+14490485 None:intergenic
GCAAAAGCTCAATATACCAT+TGG 0.497905 4_2:-14488560 Msa0590780:CDS
AGTTTCCTCACAACTCCTGT+TGG 0.502430 4_2:-14488832 Msa0590780:CDS
AAAGGCCTTATGAAACATGA+AGG 0.503766 4_2:+14488730 None:intergenic
GTGGAGGTCTTAAGGAGAAA+GGG 0.503814 4_2:+14488968 None:intergenic
TACATCACTCAGAGGAGACT+TGG 0.505743 4_2:+14489023 None:intergenic
AGTGATGTATTCTTGGCAAA+TGG 0.508041 4_2:-14489009 Msa0590780:CDS
GCCATCACAATTTGTTGTGT+GGG 0.513624 4_2:-14488635 Msa0590780:CDS
ATCTTTGAAATATATATGCA+TGG 0.517526 4_2:-14490156 Msa0590780:CDS
TGTGTTTAGTATTTATTCTG+GGG 0.523933 4_2:-14490447 Msa0590780:CDS
TCAACTTCAGGTTCTGGCAA+AGG 0.534593 4_2:+14490525 None:intergenic
ATCACTCAGAGGAGACTTGG+AGG 0.535183 4_2:+14489026 None:intergenic
GGCCATCACAATTTGTTGTG+TGG 0.538348 4_2:-14488636 Msa0590780:CDS
ACTTGTAAGATCTGCGGGGA+GGG 0.550642 4_2:-14490470 Msa0590780:CDS
AAGAAATCTTTACAAGAGTG+TGG 0.573379 4_2:-14490624 Msa0590780:CDS
TAATCTTCAAGTGACACCAT+TGG 0.576349 4_2:-14488611 Msa0590780:CDS
TCAGTTCTAGAGCAATTGAA+TGG 0.578611 4_2:-14488808 Msa0590780:CDS
CTACTCTAGGCATTGTGAAG+AGG 0.587210 4_2:-14488657 Msa0590780:CDS
AGTTGCTGAAGAGTGTTCCC+AGG 0.589986 4_2:+14490290 None:intergenic
ATAGAAATGCATGTCACTGT+TGG 0.599207 4_2:-14490233 Msa0590780:CDS
TACTTCACTTGTAAGATCTG+CGG 0.605598 4_2:-14490476 Msa0590780:CDS
CTAGAAATATTATCATCCAA+TGG 0.607733 4_2:+14488595 None:intergenic
TCCCACACAACAAATTGTGA+TGG 0.608209 4_2:+14488634 None:intergenic
TGCTGCTCCAAATCATCCAA+TGG 0.608213 4_2:+14488544 None:intergenic
TGTCACTGTTGGTTTGAAAG+AGG 0.609598 4_2:-14490222 Msa0590780:CDS
CCAGAACCTGAAGTTGAATG+TGG 0.612148 4_2:-14490519 Msa0590780:CDS
GCAGTAGCATCATAATAATG+TGG 0.620233 4_2:+14488949 None:intergenic
CACTTGTAAGATCTGCGGGG+AGG 0.626069 4_2:-14490471 Msa0590780:CDS
GTAGAGAATGTGCATCATAG+AGG 0.634323 4_2:-14490395 Msa0590780:CDS
TTGTTTCAGCTAAAACTACA+CGG 0.647766 4_2:+14490768 None:intergenic
CTGATCCAACAGGAGTTGTG+AGG 0.651492 4_2:+14488827 None:intergenic
TTTGAAATATATATGCATGG+TGG 0.655547 4_2:-14490153 Msa0590780:CDS
GTAGCATCATAATAATGTGG+AGG 0.668124 4_2:+14488952 None:intergenic
AGGGACTCACAATTGTTGTG+TGG 0.671588 4_2:+14490545 None:intergenic
GGATGATTTGGAGCAGCATG+TGG 0.676783 4_2:-14488539 None:intergenic
GCCAAGAATACATCACTCAG+AGG 0.700298 4_2:+14489015 None:intergenic
CTTCACTTGTAAGATCTGCG+GGG 0.756229 4_2:-14490474 Msa0590780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTGTTATAATTAAATTA+AGG + chr4_2:14490238-14490257 None:intergenic 10.0%
!! GAATTGTTATAATTAAATTA+AGG + chr4_2:14490238-14490257 None:intergenic 10.0%
!!! CTGTTTATATTTTTAGATTT+TGG - chr4_2:14490303-14490322 Msa0590780:CDS 15.0%
!!! CTGTTTATATTTTTAGATTT+TGG - chr4_2:14490303-14490322 Msa0590780:CDS 15.0%
!!! ATCTTTGAAATATATATGCA+TGG - chr4_2:14489217-14489236 Msa0590780:intron 20.0%
!!! AAAGAAAACAAGTTTTGAAA+TGG - chr4_2:14489267-14489286 Msa0590780:intron 20.0%
!!! GAAAAGTATTTGAAACTTTT+AGG - chr4_2:14489289-14489308 Msa0590780:intron 20.0%
!! AGATATTTCAAAAATCCTTT+AGG + chr4_2:14489554-14489573 None:intergenic 20.0%
!! CACTTATAAATCGATAAATA+TGG + chr4_2:14489770-14489789 None:intergenic 20.0%
!! ATTACATCCAATAAAAAAGT+GGG - chr4_2:14489929-14489948 Msa0590780:intron 20.0%
!! TAATTAAATTAAGGTGCAAA+AGG + chr4_2:14490229-14490248 None:intergenic 20.0%
!!! AAAAGATTCATGTCTTTTAA+AGG + chr4_2:14490664-14490683 None:intergenic 20.0%
!!! ATCTTTGAAATATATATGCA+TGG - chr4_2:14489217-14489236 Msa0590780:intron 20.0%
!!! AAAGAAAACAAGTTTTGAAA+TGG - chr4_2:14489267-14489286 Msa0590780:intron 20.0%
!!! GAAAAGTATTTGAAACTTTT+AGG - chr4_2:14489289-14489308 Msa0590780:intron 20.0%
!! AGATATTTCAAAAATCCTTT+AGG + chr4_2:14489554-14489573 None:intergenic 20.0%
!! CACTTATAAATCGATAAATA+TGG + chr4_2:14489770-14489789 None:intergenic 20.0%
!! ATTACATCCAATAAAAAAGT+GGG - chr4_2:14489929-14489948 Msa0590780:intron 20.0%
!! TAATTAAATTAAGGTGCAAA+AGG + chr4_2:14490229-14490248 None:intergenic 20.0%
!!! AAAAGATTCATGTCTTTTAA+AGG + chr4_2:14490664-14490683 None:intergenic 20.0%
!! TTTTCTTTCATATTTGTGCA+CGG + chr4_2:14488550-14488569 None:intergenic 25.0%
! GTGTGTTTAGTATTTATTCT+GGG - chr4_2:14488925-14488944 Msa0590780:CDS 25.0%
! TGTGTTTAGTATTTATTCTG+GGG - chr4_2:14488926-14488945 Msa0590780:CDS 25.0%
!!! GATTTGTTGTGAGAAATTTA+TGG - chr4_2:14488950-14488969 Msa0590780:CDS 25.0%
!! TTTGAAATATATATGCATGG+TGG - chr4_2:14489220-14489239 Msa0590780:intron 25.0%
! TTAAAATACAATCACCATTG+TGG + chr4_2:14489634-14489653 None:intergenic 25.0%
! GATTACATCCAATAAAAAAG+TGG - chr4_2:14489928-14489947 Msa0590780:intron 25.0%
!!! TTTAACACCCACTTTTTTAT+TGG + chr4_2:14489939-14489958 None:intergenic 25.0%
! ATATTGCATGTTATATGCAT+GGG + chr4_2:14490099-14490118 None:intergenic 25.0%
! TACTACTATTATGAACCTTA+AGG - chr4_2:14490447-14490466 Msa0590780:CDS 25.0%
! ATTTACTTACTGTTACCTTA+AGG + chr4_2:14490465-14490484 None:intergenic 25.0%
!!! TTGAATGGCATTTTTTCTTT+TGG - chr4_2:14490580-14490599 Msa0590780:CDS 25.0%
!! AAAAGACATGAATCTTTTTG+AGG - chr4_2:14490666-14490685 Msa0590780:CDS 25.0%
!!! GTAGATTCTATTTTTCCATA+TGG + chr4_2:14490700-14490719 None:intergenic 25.0%
! CTAGAAATATTATCATCCAA+TGG + chr4_2:14490781-14490800 None:intergenic 25.0%
!! TTTTCTTTCATATTTGTGCA+CGG + chr4_2:14488550-14488569 None:intergenic 25.0%
! GTGTGTTTAGTATTTATTCT+GGG - chr4_2:14488925-14488944 Msa0590780:CDS 25.0%
! TGTGTTTAGTATTTATTCTG+GGG - chr4_2:14488926-14488945 Msa0590780:CDS 25.0%
!!! GATTTGTTGTGAGAAATTTA+TGG - chr4_2:14488950-14488969 Msa0590780:CDS 25.0%
!! TTTGAAATATATATGCATGG+TGG - chr4_2:14489220-14489239 Msa0590780:intron 25.0%
! TTAAAATACAATCACCATTG+TGG + chr4_2:14489634-14489653 None:intergenic 25.0%
! GATTACATCCAATAAAAAAG+TGG - chr4_2:14489928-14489947 Msa0590780:intron 25.0%
!!! TTTAACACCCACTTTTTTAT+TGG + chr4_2:14489939-14489958 None:intergenic 25.0%
! ATATTGCATGTTATATGCAT+GGG + chr4_2:14490099-14490118 None:intergenic 25.0%
! TACTACTATTATGAACCTTA+AGG - chr4_2:14490447-14490466 Msa0590780:CDS 25.0%
! ATTTACTTACTGTTACCTTA+AGG + chr4_2:14490465-14490484 None:intergenic 25.0%
!!! TTGAATGGCATTTTTTCTTT+TGG - chr4_2:14490580-14490599 Msa0590780:CDS 25.0%
!! AAAAGACATGAATCTTTTTG+AGG - chr4_2:14490666-14490685 Msa0590780:CDS 25.0%
!!! GTAGATTCTATTTTTCCATA+TGG + chr4_2:14490700-14490719 None:intergenic 25.0%
! CTAGAAATATTATCATCCAA+TGG + chr4_2:14490781-14490800 None:intergenic 25.0%
! AAAACTACCATTGACACTTT+TGG - chr4_2:14488566-14488585 Msa0590780:CDS 30.0%
TTGTTTCAGCTAAAACTACA+CGG + chr4_2:14488608-14488627 None:intergenic 30.0%
! GACATCGTTGATATTTTGTT+TGG - chr4_2:14488633-14488652 Msa0590780:CDS 30.0%
AAGAAATCTTTACAAGAGTG+TGG - chr4_2:14488749-14488768 Msa0590780:CDS 30.0%
! TTACAAGTGAAGTACTTTGT+GGG + chr4_2:14488891-14488910 None:intergenic 30.0%
GGTGTGTTTAGTATTTATTC+TGG - chr4_2:14488924-14488943 Msa0590780:CDS 30.0%
TTGTGAGAAATTTATGGTTC+AGG - chr4_2:14488956-14488975 Msa0590780:CDS 30.0%
!! CATGGTGGATTTATTCAAAT+TGG - chr4_2:14489235-14489254 Msa0590780:intron 30.0%
ACATTTCTTAATTGCAGTTG+TGG - chr4_2:14489320-14489339 Msa0590780:intron 30.0%
! AGCTTTTATAATACCATTGC+GGG + chr4_2:14489373-14489392 None:intergenic 30.0%
! CAGCTTTTATAATACCATTG+CGG + chr4_2:14489374-14489393 None:intergenic 30.0%
AAAAACCATTTATGTTCCAC+CGG + chr4_2:14489439-14489458 None:intergenic 30.0%
! TTTGAAATCTATGCATGCAA+TGG - chr4_2:14489456-14489475 Msa0590780:intron 30.0%
ATGTAGGCAAATACAATTGA+TGG + chr4_2:14489501-14489520 None:intergenic 30.0%
! TCAAAAATCCTTTAGGTTCT+GGG + chr4_2:14489547-14489566 None:intergenic 30.0%
! TTCAAAAATCCTTTAGGTTC+TGG + chr4_2:14489548-14489567 None:intergenic 30.0%
TTCCTTCATATTAACCACAA+TGG - chr4_2:14489617-14489636 Msa0590780:intron 30.0%
!! CATTACTATTGTTTTGCCTA+TGG + chr4_2:14489670-14489689 None:intergenic 30.0%
!!! AGAGAATTAGTTTTAGAGAG+TGG + chr4_2:14489839-14489858 None:intergenic 30.0%
AAAGTGGGTGTTAAAAAAAG+AGG - chr4_2:14489944-14489963 Msa0590780:intron 30.0%
AAGTGGGTGTTAAAAAAAGA+GGG - chr4_2:14489945-14489964 Msa0590780:intron 30.0%
! TAGACAGTCTTATAATACTC+CGG + chr4_2:14489986-14490005 None:intergenic 30.0%
!!! TTTTTTTTTGTCAAGTAGCC+TGG - chr4_2:14490016-14490035 Msa0590780:intron 30.0%
CTATAGCTCACAATTAAATG+TGG - chr4_2:14490042-14490061 Msa0590780:intron 30.0%
ACAATTAAATGTGGAGAAGT+GGG - chr4_2:14490051-14490070 Msa0590780:intron 30.0%
GATATTGCATGTTATATGCA+TGG + chr4_2:14490100-14490119 None:intergenic 30.0%
TAAATTAAGGTGCAAAAGGA+AGG + chr4_2:14490225-14490244 None:intergenic 30.0%
ATAATAATGTGGAGGTCTTA+AGG + chr4_2:14490416-14490435 None:intergenic 30.0%
TCAATCCTTCATGTTTCATA+AGG - chr4_2:14490638-14490657 Msa0590780:CDS 30.0%
GGAAAAATAGAATCTACTCT+AGG - chr4_2:14490703-14490722 Msa0590780:CDS 30.0%
CAATATACCATTGGATGATT+TGG - chr4_2:14490822-14490841 Msa0590780:CDS 30.0%
! AAAACTACCATTGACACTTT+TGG - chr4_2:14488566-14488585 Msa0590780:CDS 30.0%
TTGTTTCAGCTAAAACTACA+CGG + chr4_2:14488608-14488627 None:intergenic 30.0%
! GACATCGTTGATATTTTGTT+TGG - chr4_2:14488633-14488652 Msa0590780:CDS 30.0%
AAGAAATCTTTACAAGAGTG+TGG - chr4_2:14488749-14488768 Msa0590780:CDS 30.0%
! TTACAAGTGAAGTACTTTGT+GGG + chr4_2:14488891-14488910 None:intergenic 30.0%
GGTGTGTTTAGTATTTATTC+TGG - chr4_2:14488924-14488943 Msa0590780:CDS 30.0%
TTGTGAGAAATTTATGGTTC+AGG - chr4_2:14488956-14488975 Msa0590780:CDS 30.0%
!! CATGGTGGATTTATTCAAAT+TGG - chr4_2:14489235-14489254 Msa0590780:intron 30.0%
ACATTTCTTAATTGCAGTTG+TGG - chr4_2:14489320-14489339 Msa0590780:intron 30.0%
! AGCTTTTATAATACCATTGC+GGG + chr4_2:14489373-14489392 None:intergenic 30.0%
! CAGCTTTTATAATACCATTG+CGG + chr4_2:14489374-14489393 None:intergenic 30.0%
AAAAACCATTTATGTTCCAC+CGG + chr4_2:14489439-14489458 None:intergenic 30.0%
! TTTGAAATCTATGCATGCAA+TGG - chr4_2:14489456-14489475 Msa0590780:intron 30.0%
ATGTAGGCAAATACAATTGA+TGG + chr4_2:14489501-14489520 None:intergenic 30.0%
! TCAAAAATCCTTTAGGTTCT+GGG + chr4_2:14489547-14489566 None:intergenic 30.0%
! TTCAAAAATCCTTTAGGTTC+TGG + chr4_2:14489548-14489567 None:intergenic 30.0%
TTCCTTCATATTAACCACAA+TGG - chr4_2:14489617-14489636 Msa0590780:intron 30.0%
!! CATTACTATTGTTTTGCCTA+TGG + chr4_2:14489670-14489689 None:intergenic 30.0%
!!! AGAGAATTAGTTTTAGAGAG+TGG + chr4_2:14489839-14489858 None:intergenic 30.0%
AAAGTGGGTGTTAAAAAAAG+AGG - chr4_2:14489944-14489963 Msa0590780:intron 30.0%
AAGTGGGTGTTAAAAAAAGA+GGG - chr4_2:14489945-14489964 Msa0590780:intron 30.0%
! TAGACAGTCTTATAATACTC+CGG + chr4_2:14489986-14490005 None:intergenic 30.0%
!!! TTTTTTTTTGTCAAGTAGCC+TGG - chr4_2:14490016-14490035 Msa0590780:intron 30.0%
CTATAGCTCACAATTAAATG+TGG - chr4_2:14490042-14490061 Msa0590780:intron 30.0%
ACAATTAAATGTGGAGAAGT+GGG - chr4_2:14490051-14490070 Msa0590780:intron 30.0%
GATATTGCATGTTATATGCA+TGG + chr4_2:14490100-14490119 None:intergenic 30.0%
TAAATTAAGGTGCAAAAGGA+AGG + chr4_2:14490225-14490244 None:intergenic 30.0%
ATAATAATGTGGAGGTCTTA+AGG + chr4_2:14490416-14490435 None:intergenic 30.0%
TCAATCCTTCATGTTTCATA+AGG - chr4_2:14490638-14490657 Msa0590780:CDS 30.0%
GGAAAAATAGAATCTACTCT+AGG - chr4_2:14490703-14490722 Msa0590780:CDS 30.0%
CAATATACCATTGGATGATT+TGG - chr4_2:14490822-14490841 Msa0590780:CDS 30.0%
!! TTGTCTACCAAAAGTGTCAA+TGG + chr4_2:14488576-14488595 None:intergenic 35.0%
!!! GTAGTTTTAGCTGAAACAAG+TGG - chr4_2:14488609-14488628 Msa0590780:CDS 35.0%
TTCCATTAGGAACCATCATT+AGG - chr4_2:14488667-14488686 Msa0590780:CDS 35.0%
ATCCTAATGATGGTTCCTAA+TGG + chr4_2:14488672-14488691 None:intergenic 35.0%
CTTAGACACAATCCTAATGA+TGG + chr4_2:14488682-14488701 None:intergenic 35.0%
! CCAATTGTTTCTTCTTGTGA+TGG + chr4_2:14488723-14488742 None:intergenic 35.0%
CCATCACAAGAAGAAACAAT+TGG - chr4_2:14488720-14488739 Msa0590780:CDS 35.0%
GTGTGGAAAATTTCAGTGAT+AGG - chr4_2:14488766-14488785 Msa0590780:CDS 35.0%
! TTTTCGTCATAGTGAATGCA+AGG - chr4_2:14488791-14488810 Msa0590780:CDS 35.0%
AATCATCCACATTCAACTTC+AGG + chr4_2:14488863-14488882 None:intergenic 35.0%
! CTTACAAGTGAAGTACTTTG+TGG + chr4_2:14488892-14488911 None:intergenic 35.0%
TACTTCACTTGTAAGATCTG+CGG - chr4_2:14488897-14488916 Msa0590780:CDS 35.0%
! AATGTGCATCATAGAGGTTT+TGG - chr4_2:14488984-14489003 Msa0590780:CDS 35.0%
!!! TGAAGCTGGTTTTGTTAAGA+AGG - chr4_2:14489013-14489032 Msa0590780:CDS 35.0%
!!! GAAGCTGGTTTTGTTAAGAA+GGG - chr4_2:14489014-14489033 Msa0590780:CDS 35.0%
! TGTTTCTGTAACCAAGTTGT+TGG + chr4_2:14489109-14489128 None:intergenic 35.0%
ATAGAAATGCATGTCACTGT+TGG - chr4_2:14489140-14489159 Msa0590780:intron 35.0%
! GCTTTTATAATACCATTGCG+GGG + chr4_2:14489372-14489391 None:intergenic 35.0%
! TGTATTCGCTTGCATTTTGA+CGG - chr4_2:14489401-14489420 Msa0590780:intron 35.0%
TGACATTACAATCGCAATTG+CGG - chr4_2:14489578-14489597 Msa0590780:intron 35.0%
CACCATTGTGGTTAATATGA+AGG + chr4_2:14489622-14489641 None:intergenic 35.0%
TGTGCAAGAGAAATGTAACT+TGG - chr4_2:14489697-14489716 Msa0590780:intron 35.0%
CAGTACAAGAGTCAATGAAA+CGG - chr4_2:14489812-14489831 Msa0590780:intron 35.0%
AGGGTTCTTATTATTGTGAC+CGG - chr4_2:14489964-14489983 Msa0590780:intron 35.0%
CACAATTAAATGTGGAGAAG+TGG - chr4_2:14490050-14490069 Msa0590780:intron 35.0%
CAATTAAATGTGGAGAAGTG+GGG - chr4_2:14490052-14490071 Msa0590780:intron 35.0%
TACAAACTGAGTTAAGCTCA+TGG - chr4_2:14490122-14490141 Msa0590780:intron 35.0%
ACAAACTGAGTTAAGCTCAT+GGG - chr4_2:14490123-14490142 Msa0590780:intron 35.0%
AGTGATGTATTCTTGGCAAA+TGG - chr4_2:14490364-14490383 Msa0590780:CDS 35.0%
! TTAAGGAGAAAGGGTACAAT+AGG + chr4_2:14490399-14490418 None:intergenic 35.0%
GTAGCATCATAATAATGTGG+AGG + chr4_2:14490424-14490443 None:intergenic 35.0%
GCAGTAGCATCATAATAATG+TGG + chr4_2:14490427-14490446 None:intergenic 35.0%
!! TCAGTTCTAGAGCAATTGAA+TGG - chr4_2:14490565-14490584 Msa0590780:CDS 35.0%
! AAAGGCCTTATGAAACATGA+AGG + chr4_2:14490646-14490665 None:intergenic 35.0%
! TTTGAGGCAAAATCTCCATA+TGG - chr4_2:14490682-14490701 Msa0590780:CDS 35.0%
TAATCTTCAAGTGACACCAT+TGG - chr4_2:14490762-14490781 Msa0590780:CDS 35.0%
GCAAAAGCTCAATATACCAT+TGG - chr4_2:14490813-14490832 Msa0590780:CDS 35.0%
!! TTGTCTACCAAAAGTGTCAA+TGG + chr4_2:14488576-14488595 None:intergenic 35.0%
!!! GTAGTTTTAGCTGAAACAAG+TGG - chr4_2:14488609-14488628 Msa0590780:CDS 35.0%
TTCCATTAGGAACCATCATT+AGG - chr4_2:14488667-14488686 Msa0590780:CDS 35.0%
ATCCTAATGATGGTTCCTAA+TGG + chr4_2:14488672-14488691 None:intergenic 35.0%
CTTAGACACAATCCTAATGA+TGG + chr4_2:14488682-14488701 None:intergenic 35.0%
! CCAATTGTTTCTTCTTGTGA+TGG + chr4_2:14488723-14488742 None:intergenic 35.0%
CCATCACAAGAAGAAACAAT+TGG - chr4_2:14488720-14488739 Msa0590780:CDS 35.0%
GTGTGGAAAATTTCAGTGAT+AGG - chr4_2:14488766-14488785 Msa0590780:CDS 35.0%
! TTTTCGTCATAGTGAATGCA+AGG - chr4_2:14488791-14488810 Msa0590780:CDS 35.0%
AATCATCCACATTCAACTTC+AGG + chr4_2:14488863-14488882 None:intergenic 35.0%
! CTTACAAGTGAAGTACTTTG+TGG + chr4_2:14488892-14488911 None:intergenic 35.0%
TACTTCACTTGTAAGATCTG+CGG - chr4_2:14488897-14488916 Msa0590780:CDS 35.0%
! AATGTGCATCATAGAGGTTT+TGG - chr4_2:14488984-14489003 Msa0590780:CDS 35.0%
!!! TGAAGCTGGTTTTGTTAAGA+AGG - chr4_2:14489013-14489032 Msa0590780:CDS 35.0%
!!! GAAGCTGGTTTTGTTAAGAA+GGG - chr4_2:14489014-14489033 Msa0590780:CDS 35.0%
! TGTTTCTGTAACCAAGTTGT+TGG + chr4_2:14489109-14489128 None:intergenic 35.0%
ATAGAAATGCATGTCACTGT+TGG - chr4_2:14489140-14489159 Msa0590780:intron 35.0%
! GCTTTTATAATACCATTGCG+GGG + chr4_2:14489372-14489391 None:intergenic 35.0%
! TGTATTCGCTTGCATTTTGA+CGG - chr4_2:14489401-14489420 Msa0590780:intron 35.0%
TGACATTACAATCGCAATTG+CGG - chr4_2:14489578-14489597 Msa0590780:intron 35.0%
CACCATTGTGGTTAATATGA+AGG + chr4_2:14489622-14489641 None:intergenic 35.0%
TGTGCAAGAGAAATGTAACT+TGG - chr4_2:14489697-14489716 Msa0590780:intron 35.0%
CAGTACAAGAGTCAATGAAA+CGG - chr4_2:14489812-14489831 Msa0590780:intron 35.0%
AGGGTTCTTATTATTGTGAC+CGG - chr4_2:14489964-14489983 Msa0590780:intron 35.0%
CACAATTAAATGTGGAGAAG+TGG - chr4_2:14490050-14490069 Msa0590780:intron 35.0%
CAATTAAATGTGGAGAAGTG+GGG - chr4_2:14490052-14490071 Msa0590780:intron 35.0%
TACAAACTGAGTTAAGCTCA+TGG - chr4_2:14490122-14490141 Msa0590780:intron 35.0%
ACAAACTGAGTTAAGCTCAT+GGG - chr4_2:14490123-14490142 Msa0590780:intron 35.0%
AGTGATGTATTCTTGGCAAA+TGG - chr4_2:14490364-14490383 Msa0590780:CDS 35.0%
! TTAAGGAGAAAGGGTACAAT+AGG + chr4_2:14490399-14490418 None:intergenic 35.0%
GTAGCATCATAATAATGTGG+AGG + chr4_2:14490424-14490443 None:intergenic 35.0%
GCAGTAGCATCATAATAATG+TGG + chr4_2:14490427-14490446 None:intergenic 35.0%
!! TCAGTTCTAGAGCAATTGAA+TGG - chr4_2:14490565-14490584 Msa0590780:CDS 35.0%
! AAAGGCCTTATGAAACATGA+AGG + chr4_2:14490646-14490665 None:intergenic 35.0%
! TTTGAGGCAAAATCTCCATA+TGG - chr4_2:14490682-14490701 Msa0590780:CDS 35.0%
TAATCTTCAAGTGACACCAT+TGG - chr4_2:14490762-14490781 Msa0590780:CDS 35.0%
GCAAAAGCTCAATATACCAT+TGG - chr4_2:14490813-14490832 Msa0590780:CDS 35.0%
! GGTTTTCTCACACTTCCATT+AGG - chr4_2:14488654-14488673 Msa0590780:CDS 40.0%
ACTTCACTTGTAAGATCTGC+GGG - chr4_2:14488898-14488917 Msa0590780:CDS 40.0%
GTAGAGAATGTGCATCATAG+AGG - chr4_2:14488978-14488997 Msa0590780:CDS 40.0%
! AAAGTGCTTCAAAGCTTTCC+TGG - chr4_2:14489065-14489084 Msa0590780:intron 40.0%
AAGTGCTTCAAAGCTTTCCT+GGG - chr4_2:14489066-14489085 Msa0590780:intron 40.0%
!! TGTCACTGTTGGTTTGAAAG+AGG - chr4_2:14489151-14489170 Msa0590780:intron 40.0%
!! TGCAAAAACCCTTTAGGTTG+CGG + chr4_2:14489347-14489366 None:intergenic 40.0%
AATTGCCGGTGGAACATAAA+TGG - chr4_2:14489431-14489450 Msa0590780:intron 40.0%
CAATGGCATTGCAACAATTG+CGG - chr4_2:14489473-14489492 Msa0590780:intron 40.0%
AATTGTGTCCCAGAACCTAA+AGG - chr4_2:14489536-14489555 Msa0590780:intron 40.0%
GACATTACAATCGCAATTGC+GGG - chr4_2:14489579-14489598 Msa0590780:intron 40.0%
TAATCGCAACATGAGACCAT+AGG - chr4_2:14489651-14489670 Msa0590780:intron 40.0%
TATGGATGCAGTTGTAGACT+TGG + chr4_2:14489752-14489771 None:intergenic 40.0%
! TTAACCTAGCTCTCACACTT+TGG - chr4_2:14489871-14489890 Msa0590780:intron 40.0%
ATTTCCAAAGTGTGAGAGCT+AGG + chr4_2:14489878-14489897 None:intergenic 40.0%
! TAGCTCTCACACTTTGGAAA+TGG - chr4_2:14489877-14489896 Msa0590780:intron 40.0%
AATTGTGAGCTATAGCAACC+AGG + chr4_2:14490037-14490056 None:intergenic 40.0%
TGCATGTTATATGCATGGGT+CGG + chr4_2:14490095-14490114 None:intergenic 40.0%
CAAACTGAGTTAAGCTCATG+GGG - chr4_2:14490124-14490143 Msa0590780:intron 40.0%
TCCTCTGAGTGATGTATTCT+TGG - chr4_2:14490357-14490376 Msa0590780:CDS 40.0%
!! GCCATCACAATTTGTTGTGT+GGG - chr4_2:14490738-14490757 Msa0590780:CDS 40.0%
TCCCACACAACAAATTGTGA+TGG + chr4_2:14490742-14490761 None:intergenic 40.0%
! GGTTTTCTCACACTTCCATT+AGG - chr4_2:14488654-14488673 Msa0590780:CDS 40.0%
ACTTCACTTGTAAGATCTGC+GGG - chr4_2:14488898-14488917 Msa0590780:CDS 40.0%
GTAGAGAATGTGCATCATAG+AGG - chr4_2:14488978-14488997 Msa0590780:CDS 40.0%
! AAAGTGCTTCAAAGCTTTCC+TGG - chr4_2:14489065-14489084 Msa0590780:intron 40.0%
AAGTGCTTCAAAGCTTTCCT+GGG - chr4_2:14489066-14489085 Msa0590780:intron 40.0%
!! TGTCACTGTTGGTTTGAAAG+AGG - chr4_2:14489151-14489170 Msa0590780:intron 40.0%
!! TGCAAAAACCCTTTAGGTTG+CGG + chr4_2:14489347-14489366 None:intergenic 40.0%
AATTGCCGGTGGAACATAAA+TGG - chr4_2:14489431-14489450 Msa0590780:intron 40.0%
CAATGGCATTGCAACAATTG+CGG - chr4_2:14489473-14489492 Msa0590780:intron 40.0%
AATTGTGTCCCAGAACCTAA+AGG - chr4_2:14489536-14489555 Msa0590780:intron 40.0%
GACATTACAATCGCAATTGC+GGG - chr4_2:14489579-14489598 Msa0590780:intron 40.0%
TAATCGCAACATGAGACCAT+AGG - chr4_2:14489651-14489670 Msa0590780:intron 40.0%
TATGGATGCAGTTGTAGACT+TGG + chr4_2:14489752-14489771 None:intergenic 40.0%
! TTAACCTAGCTCTCACACTT+TGG - chr4_2:14489871-14489890 Msa0590780:intron 40.0%
ATTTCCAAAGTGTGAGAGCT+AGG + chr4_2:14489878-14489897 None:intergenic 40.0%
! TAGCTCTCACACTTTGGAAA+TGG - chr4_2:14489877-14489896 Msa0590780:intron 40.0%
AATTGTGAGCTATAGCAACC+AGG + chr4_2:14490037-14490056 None:intergenic 40.0%
TGCATGTTATATGCATGGGT+CGG + chr4_2:14490095-14490114 None:intergenic 40.0%
CAAACTGAGTTAAGCTCATG+GGG - chr4_2:14490124-14490143 Msa0590780:intron 40.0%
TCCTCTGAGTGATGTATTCT+TGG - chr4_2:14490357-14490376 Msa0590780:CDS 40.0%
!! GCCATCACAATTTGTTGTGT+GGG - chr4_2:14490738-14490757 Msa0590780:CDS 40.0%
TCCCACACAACAAATTGTGA+TGG + chr4_2:14490742-14490761 None:intergenic 40.0%
AGGGACTCACAATTGTTGTG+TGG + chr4_2:14488831-14488850 None:intergenic 45.0%
! CAACTTCAGGTTCTGGCAAA+GGG + chr4_2:14488850-14488869 None:intergenic 45.0%
! TCAACTTCAGGTTCTGGCAA+AGG + chr4_2:14488851-14488870 None:intergenic 45.0%
! CCACATTCAACTTCAGGTTC+TGG + chr4_2:14488857-14488876 None:intergenic 45.0%
CCAGAACCTGAAGTTGAATG+TGG - chr4_2:14488854-14488873 Msa0590780:CDS 45.0%
CTTCACTTGTAAGATCTGCG+GGG - chr4_2:14488899-14488918 Msa0590780:CDS 45.0%
!! GTGCATCATAGAGGTTTTGG+TGG - chr4_2:14488987-14489006 Msa0590780:CDS 45.0%
!! GGTTTTGGTGGAAATGAAGC+TGG - chr4_2:14488999-14489018 Msa0590780:CDS 45.0%
CTTCAGCAACTCCAACAACT+TGG - chr4_2:14489095-14489114 Msa0590780:intron 45.0%
GGGGATTGCAAAAACCCTTT+AGG + chr4_2:14489353-14489372 None:intergenic 45.0%
TGCGGTTGCGATCAAAATGT+AGG + chr4_2:14489517-14489536 None:intergenic 45.0%
!! TAGGTTCTGGGACACAATTG+CGG + chr4_2:14489535-14489554 None:intergenic 45.0%
GGAAATGGATCCCACAAAAG+TGG - chr4_2:14489892-14489911 Msa0590780:intron 45.0%
AATGGATCCCACAAAAGTGG+TGG - chr4_2:14489895-14489914 Msa0590780:intron 45.0%
ATGGATCCCACAAAAGTGGT+GGG - chr4_2:14489896-14489915 Msa0590780:intron 45.0%
!! ATATGCCCCACCACTTTTGT+GGG + chr4_2:14489905-14489924 None:intergenic 45.0%
!! TATATGCCCCACCACTTTTG+TGG + chr4_2:14489906-14489925 None:intergenic 45.0%
CATGTTATATGCATGGGTCG+GGG + chr4_2:14490093-14490112 None:intergenic 45.0%
GCATGTTATATGCATGGGTC+GGG + chr4_2:14490094-14490113 None:intergenic 45.0%
TACATCACTCAGAGGAGACT+TGG + chr4_2:14490353-14490372 None:intergenic 45.0%
GCCAAGAATACATCACTCAG+AGG + chr4_2:14490361-14490380 None:intergenic 45.0%
GTGGAGGTCTTAAGGAGAAA+GGG + chr4_2:14490408-14490427 None:intergenic 45.0%
TGTGGAGGTCTTAAGGAGAA+AGG + chr4_2:14490409-14490428 None:intergenic 45.0%
AGTTTCCTCACAACTCCTGT+TGG - chr4_2:14490541-14490560 Msa0590780:CDS 45.0%
!! TGCTCTAGAACTGATCCAAC+AGG + chr4_2:14490559-14490578 None:intergenic 45.0%
! CTACTCTAGGCATTGTGAAG+AGG - chr4_2:14490716-14490735 Msa0590780:CDS 45.0%
!! GGCCATCACAATTTGTTGTG+TGG - chr4_2:14490737-14490756 Msa0590780:CDS 45.0%
TGCTGCTCCAAATCATCCAA+TGG + chr4_2:14490832-14490851 None:intergenic 45.0%
AGGGACTCACAATTGTTGTG+TGG + chr4_2:14488831-14488850 None:intergenic 45.0%
! CAACTTCAGGTTCTGGCAAA+GGG + chr4_2:14488850-14488869 None:intergenic 45.0%
! TCAACTTCAGGTTCTGGCAA+AGG + chr4_2:14488851-14488870 None:intergenic 45.0%
! CCACATTCAACTTCAGGTTC+TGG + chr4_2:14488857-14488876 None:intergenic 45.0%
CCAGAACCTGAAGTTGAATG+TGG - chr4_2:14488854-14488873 Msa0590780:CDS 45.0%
CTTCACTTGTAAGATCTGCG+GGG - chr4_2:14488899-14488918 Msa0590780:CDS 45.0%
!! GTGCATCATAGAGGTTTTGG+TGG - chr4_2:14488987-14489006 Msa0590780:CDS 45.0%
!! GGTTTTGGTGGAAATGAAGC+TGG - chr4_2:14488999-14489018 Msa0590780:CDS 45.0%
CTTCAGCAACTCCAACAACT+TGG - chr4_2:14489095-14489114 Msa0590780:intron 45.0%
GGGGATTGCAAAAACCCTTT+AGG + chr4_2:14489353-14489372 None:intergenic 45.0%
TGCGGTTGCGATCAAAATGT+AGG + chr4_2:14489517-14489536 None:intergenic 45.0%
!! TAGGTTCTGGGACACAATTG+CGG + chr4_2:14489535-14489554 None:intergenic 45.0%
GGAAATGGATCCCACAAAAG+TGG - chr4_2:14489892-14489911 Msa0590780:intron 45.0%
AATGGATCCCACAAAAGTGG+TGG - chr4_2:14489895-14489914 Msa0590780:intron 45.0%
ATGGATCCCACAAAAGTGGT+GGG - chr4_2:14489896-14489915 Msa0590780:intron 45.0%
!! ATATGCCCCACCACTTTTGT+GGG + chr4_2:14489905-14489924 None:intergenic 45.0%
!! TATATGCCCCACCACTTTTG+TGG + chr4_2:14489906-14489925 None:intergenic 45.0%
CATGTTATATGCATGGGTCG+GGG + chr4_2:14490093-14490112 None:intergenic 45.0%
GCATGTTATATGCATGGGTC+GGG + chr4_2:14490094-14490113 None:intergenic 45.0%
TACATCACTCAGAGGAGACT+TGG + chr4_2:14490353-14490372 None:intergenic 45.0%
GCCAAGAATACATCACTCAG+AGG + chr4_2:14490361-14490380 None:intergenic 45.0%
GTGGAGGTCTTAAGGAGAAA+GGG + chr4_2:14490408-14490427 None:intergenic 45.0%
TGTGGAGGTCTTAAGGAGAA+AGG + chr4_2:14490409-14490428 None:intergenic 45.0%
AGTTTCCTCACAACTCCTGT+TGG - chr4_2:14490541-14490560 Msa0590780:CDS 45.0%
!! TGCTCTAGAACTGATCCAAC+AGG + chr4_2:14490559-14490578 None:intergenic 45.0%
! CTACTCTAGGCATTGTGAAG+AGG - chr4_2:14490716-14490735 Msa0590780:CDS 45.0%
!! GGCCATCACAATTTGTTGTG+TGG - chr4_2:14490737-14490756 Msa0590780:CDS 45.0%
TGCTGCTCCAAATCATCCAA+TGG + chr4_2:14490832-14490851 None:intergenic 45.0%
!!! TAATTTTAATTAATTTTACT+TGG - chr4_2:14489186-14489205 Msa0590780:intron 5.0%
!!! TAATTTTAATTAATTTTACT+TGG - chr4_2:14489186-14489205 Msa0590780:intron 5.0%
ACTTGTAAGATCTGCGGGGA+GGG - chr4_2:14488903-14488922 Msa0590780:CDS 50.0%
!! AGTTGCTGAAGAGTGTTCCC+AGG + chr4_2:14489086-14489105 None:intergenic 50.0%
AGTTGTGGACCGCAACCTAA+AGG - chr4_2:14489335-14489354 Msa0590780:intron 50.0%
GTTGTGGACCGCAACCTAAA+GGG - chr4_2:14489336-14489355 Msa0590780:intron 50.0%
! GGTTTTTGCAATCCCCGCAA+TGG - chr4_2:14489357-14489376 Msa0590780:intron 50.0%
TTGACGGCAACTGCAATTGC+CGG - chr4_2:14489417-14489436 Msa0590780:intron 50.0%
TGGATCCCACAAAAGTGGTG+GGG - chr4_2:14489897-14489916 Msa0590780:intron 50.0%
ATCACTCAGAGGAGACTTGG+AGG + chr4_2:14490350-14490369 None:intergenic 50.0%
CTGATCCAACAGGAGTTGTG+AGG + chr4_2:14490549-14490568 None:intergenic 50.0%
ACTTGTAAGATCTGCGGGGA+GGG - chr4_2:14488903-14488922 Msa0590780:CDS 50.0%
!! AGTTGCTGAAGAGTGTTCCC+AGG + chr4_2:14489086-14489105 None:intergenic 50.0%
AGTTGTGGACCGCAACCTAA+AGG - chr4_2:14489335-14489354 Msa0590780:intron 50.0%
GTTGTGGACCGCAACCTAAA+GGG - chr4_2:14489336-14489355 Msa0590780:intron 50.0%
! GGTTTTTGCAATCCCCGCAA+TGG - chr4_2:14489357-14489376 Msa0590780:intron 50.0%
TTGACGGCAACTGCAATTGC+CGG - chr4_2:14489417-14489436 Msa0590780:intron 50.0%
TGGATCCCACAAAAGTGGTG+GGG - chr4_2:14489897-14489916 Msa0590780:intron 50.0%
ATCACTCAGAGGAGACTTGG+AGG + chr4_2:14490350-14490369 None:intergenic 50.0%
CTGATCCAACAGGAGTTGTG+AGG + chr4_2:14490549-14490568 None:intergenic 50.0%
CACTTGTAAGATCTGCGGGG+AGG - chr4_2:14488902-14488921 Msa0590780:CDS 55.0%
! ATGTGGAGAAGTGGGGTGTC+CGG - chr4_2:14490059-14490078 Msa0590780:intron 55.0%
CACTTGTAAGATCTGCGGGG+AGG - chr4_2:14488902-14488921 Msa0590780:CDS 55.0%
! ATGTGGAGAAGTGGGGTGTC+CGG - chr4_2:14490059-14490078 Msa0590780:intron 55.0%
ACGGCAACTGCAATTGCCGG+TGG - chr4_2:14489420-14489439 Msa0590780:intron 60.0%
! TGTGGAGAAGTGGGGTGTCC+GGG - chr4_2:14490060-14490079 Msa0590780:intron 60.0%
ATGGGTCGGGGTTCAAACCC+CGG + chr4_2:14490081-14490100 None:intergenic 60.0%
ACGGCAACTGCAATTGCCGG+TGG - chr4_2:14489420-14489439 Msa0590780:intron 60.0%
! TGTGGAGAAGTGGGGTGTCC+GGG - chr4_2:14490060-14490079 Msa0590780:intron 60.0%
ATGGGTCGGGGTTCAAACCC+CGG + chr4_2:14490081-14490100 None:intergenic 60.0%
! GTGGAGAAGTGGGGTGTCCG+GGG - chr4_2:14490061-14490080 Msa0590780:intron 65.0%
! GTGGAGAAGTGGGGTGTCCG+GGG - chr4_2:14490061-14490080 Msa0590780:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 14488540 14490855 14488540 ID=Msa0590780;Name=Msa0590780
chr4_2 mRNA 14488540 14490855 14488540 ID=Msa0590780-mRNA-1;Parent=Msa0590780;Name=Msa0590780-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|0|0.5|2|0|418
chr4_2 exon 14490139 14490855 14490139 ID=Msa0590780-mRNA-1:exon:4188;Parent=Msa0590780-mRNA-1
chr4_2 exon 14488540 14489076 14488540 ID=Msa0590780-mRNA-1:exon:4187;Parent=Msa0590780-mRNA-1
chr4_2 CDS 14490139 14490855 14490139 ID=Msa0590780-mRNA-1:cds;Parent=Msa0590780-mRNA-1
chr4_2 CDS 14488540 14489076 14488540 ID=Msa0590780-mRNA-1:cds;Parent=Msa0590780-mRNA-1
Gene Sequence

>Msa0590780

ATGGCTTCCGTGCACAAATATGAAAGAAAACTACCATTGACACTTTTGGTAGACAAAGAAAAAAACCGTGTAGTTTTAGCTGAAACAAGTGGCGACATCGTTGATATTTTGTTTGGTTTTCTCACACTTCCATTAGGAACCATCATTAGGATTGTGTCTAAGAATCAACATGATGATGAACCATCACAAGAAGAAACAATTGGTTGCATAAGAAATCTTTACAAGAGTGTGGAAAATTTCAGTGATAGGTTTTTTCGTCATAGTGAATGCAAGGCAATGTTGCTTTATCCACACAACAATTGTGAGTCCCTTTGCCAGAACCTGAAGTTGAATGTGGATGATTCAAAACCCACAAAGTACTTCACTTGTAAGATCTGCGGGGAGGGTGTGTTTAGTATTTATTCTGGGGTGATTTGTTGTGAGAAATTTATGGTTCAGGTAGAGAATGTGCATCATAGAGGTTTTGGTGGAAATGAAGCTGGTTTTGTTAAGAAGGGAACTTTGTATTTAATTTTTGATGATTTAAAAGTGCTTCAAAGCTTTCCTGGGAACACTCTTCAGCAACTCCAACAACTTGGTTACAGAAACATCAACGAGCTGATAGAAATGCATGTCACTGTTGGTTTGAAAGAGGTACTATGTCTTATAATTTTAATTAATTTTACTTGGCAAAGTTTATCTTTGAAATATATATGCATGGTGGATTTATTCAAATTGATTTTGGACTTGCTAAAAAAAGCATTAACCTCCAAGTCTCCTCTGAGTGATGTATTCTTGGCAAATGGAGAACTTTGCCTATTGTACCCTTTCTCCTTAAGACCTCCACATTATTATGATGCTACTGCTACTACTATTATGAACCTTAAGGTAACAGTAAGTAAATCAAAGAAGAAGATACTATATGCTGAAGCTGAGAGAGATTTTGTTAATTTTCTATTCAGTTTCCTCACAACTCCTGTTGGATCAGTTCTAGAGCAATTGAATGGCATTTTTTCTTTTGGATGTATGAATAACTTGCACAAAAGTGTGAAAGAACTCAATCCTTCATGTTTCATAAGGCCTTTAAAAGACATGAATCTTTTTGAGGCAAAATCTCCATATGGAAAAATAGAATCTACTCTAGGCATTGTGAAGAGGCCATCACAATTTGTTGTGTGGGATAATCTTCAAGTGACACCATTGGATGATAATATTTCTAGCATTGCATTTTTGCAAAAGCTCAATATACCATTGGATGATTTGGAGCAGCATGTG

Protein sequence

>Msa0590780

MASVHKYERKLPLTLLVDKEKNRVVLAETSGDIVDILFGFLTLPLGTIIRIVSKNQHDDEPSQEETIGCIRNLYKSVENFSDRFFRHSECKAMLLYPHNNCESLCQNLKLNVDDSKPTKYFTCKICGEGVFSIYSGVICCEKFMVQVENVHHRGFGGNEAGFVKKGTLYLIFDDLKVLQSFPGNTLQQLQQLGYRNINELIEMHVTVGLKEVLCLIILINFTWQSLSLKYICMVDLFKLILDLLKKALTSKSPLSDVFLANGELCLLYPFSLRPPHYYDATATTIMNLKVTVSKSKKKILYAEAERDFVNFLFSFLTTPVGSVLEQLNGIFSFGCMNNLHKSVKELNPSCFIRPLKDMNLFEAKSPYGKIESTLGIVKRPSQFVVWDNLQVTPLDDNISSIAFLQKLNIPLDDLEQHV