Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270240 | G7L6Y2 | 75.238 | 105 | 21 | 2 | 8 | 107 | 483 | 587 | 5.48e-40 | 150 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013750 | Msa1270240 | 0.820497 | 6.649292e-53 | -8.615850e-47 |
| Msa0014330 | Msa1270240 | 0.817791 | 2.745143e-52 | -8.615850e-47 |
| Msa0015750 | Msa1270240 | 0.868998 | 4.303887e-66 | -8.615850e-47 |
| Msa0016570 | Msa1270240 | 0.866802 | 2.184736e-65 | -8.615850e-47 |
| Msa0016580 | Msa1270240 | 0.847416 | 1.172692e-59 | -8.615850e-47 |
| Msa0092630 | Msa1270240 | 0.813479 | 2.507489e-51 | -8.615850e-47 |
| Msa0102070 | Msa1270240 | 0.888223 | 7.141792e-73 | -8.615850e-47 |
| Msa0110270 | Msa1270240 | 0.835361 | 1.755049e-56 | -8.615850e-47 |
| Msa0111510 | Msa1270240 | 0.834004 | 3.851058e-56 | -8.615850e-47 |
| Msa0118050 | Msa1270240 | 0.818556 | 1.842614e-52 | -8.615850e-47 |
| Msa0118060 | Msa1270240 | 0.813529 | 2.444293e-51 | -8.615850e-47 |
| Msa0604350 | Msa1270240 | 0.832116 | 1.135547e-55 | -8.615850e-47 |
| Msa0636170 | Msa1270240 | 0.857120 | 2.026321e-62 | -8.615850e-47 |
| Msa0639610 | Msa1270240 | 0.839722 | 1.337100e-57 | -8.615850e-47 |
| Msa0650630 | Msa1270240 | 0.803626 | 3.186648e-49 | -8.615850e-47 |
| Msa0668260 | Msa1270240 | 0.807588 | 4.697138e-50 | -8.615850e-47 |
| Msa0673450 | Msa1270240 | 0.809715 | 1.649911e-50 | -8.615850e-47 |
| Msa0675830 | Msa1270240 | 0.828179 | 1.038122e-54 | -8.615850e-47 |
| Msa0678930 | Msa1270240 | 0.863137 | 3.085041e-64 | -8.615850e-47 |
| Msa0694370 | Msa1270240 | 0.821189 | 4.608158e-53 | -8.615850e-47 |
| Msa0720350 | Msa1270240 | 0.801432 | 9.028477e-49 | -8.615850e-47 |
| Msa0725850 | Msa1270240 | 0.836691 | 8.066217e-57 | -8.615850e-47 |
| Msa0726140 | Msa1270240 | 0.914386 | 2.036579e-84 | -8.615850e-47 |
| Msa0729800 | Msa1270240 | 0.870023 | 1.994819e-66 | -8.615850e-47 |
| Msa0732310 | Msa1270240 | 0.818577 | 1.823083e-52 | -8.615850e-47 |
| Msa0732710 | Msa1270240 | 0.828686 | 7.829950e-55 | -8.615850e-47 |
| Msa0733290 | Msa1270240 | 0.855910 | 4.594130e-62 | -8.615850e-47 |
| Msa0735080 | Msa1270240 | 0.827734 | 1.328365e-54 | -8.615850e-47 |
| Msa0741990 | Msa1270240 | 0.831497 | 1.614069e-55 | -8.615850e-47 |
| Msa0743810 | Msa1270240 | 0.901527 | 2.448314e-78 | -8.615850e-47 |
| Msa0745060 | Msa1270240 | 0.925752 | 1.198063e-90 | -8.615850e-47 |
| Msa0764960 | Msa1270240 | 0.822394 | 2.424751e-53 | -8.615850e-47 |
| Msa0766630 | Msa1270240 | 0.808633 | 2.814534e-50 | -8.615850e-47 |
| Msa0767720 | Msa1270240 | 0.872913 | 2.206523e-67 | -8.615850e-47 |
| Msa0775300 | Msa1270240 | 0.820026 | 8.524391e-53 | -8.615850e-47 |
| Msa0777870 | Msa1270240 | 0.869346 | 3.316235e-66 | -8.615850e-47 |
| Msa0783160 | Msa1270240 | 0.887690 | 1.142851e-72 | -8.615850e-47 |
| Msa0784290 | Msa1270240 | 0.828927 | 6.846000e-55 | -8.615850e-47 |
| Msa0784300 | Msa1270240 | 0.823521 | 1.324245e-53 | -8.615850e-47 |
| Msa0787600 | Msa1270240 | 0.883743 | 3.464576e-71 | -8.615850e-47 |
| Msa0789250 | Msa1270240 | 0.825136 | 5.525302e-54 | -8.615850e-47 |
| Msa0808010 | Msa1270240 | 0.862317 | 5.521020e-64 | -8.615850e-47 |
| Msa0808020 | Msa1270240 | 0.854056 | 1.587021e-61 | -8.615850e-47 |
| Msa0811080 | Msa1270240 | 0.833357 | 5.586859e-56 | -8.615850e-47 |
| Msa0811270 | Msa1270240 | 0.852041 | 5.987333e-61 | -8.615850e-47 |
| Msa0824600 | Msa1270240 | 0.846295 | 2.375775e-59 | -8.615850e-47 |
| Msa0825860 | Msa1270240 | 0.919630 | 3.540941e-87 | -8.615850e-47 |
| Msa0833290 | Msa1270240 | 0.850704 | 1.429189e-60 | -8.615850e-47 |
| Msa0833300 | Msa1270240 | 0.839153 | 1.878210e-57 | -8.615850e-47 |
| Msa0123810 | Msa1270240 | 0.824401 | 8.234117e-54 | -8.615850e-47 |
| Msa0124100 | Msa1270240 | 0.849350 | 3.420699e-60 | -8.615850e-47 |
| Msa0124150 | Msa1270240 | 0.821997 | 2.998675e-53 | -8.615850e-47 |
| Msa0142220 | Msa1270240 | 0.855821 | 4.878859e-62 | -8.615850e-47 |
| Msa0145750 | Msa1270240 | 0.878159 | 3.519751e-69 | -8.615850e-47 |
| Msa0153910 | Msa1270240 | 0.830988 | 2.152803e-55 | -8.615850e-47 |
| Msa0188460 | Msa1270240 | 0.803739 | 3.018904e-49 | -8.615850e-47 |
| Msa0197010 | Msa1270240 | 0.822848 | 1.901814e-53 | -8.615850e-47 |
| Msa0199240 | Msa1270240 | 0.806612 | 7.560071e-50 | -8.615850e-47 |
| Msa0200000 | Msa1270240 | 0.847890 | 8.684066e-60 | -8.615850e-47 |
| Msa0214380 | Msa1270240 | 0.805905 | 1.064878e-49 | -8.615850e-47 |
| Msa0227480 | Msa1270240 | 0.883167 | 5.642929e-71 | -8.615850e-47 |
| Msa0231000 | Msa1270240 | 0.849782 | 2.591532e-60 | -8.615850e-47 |
| Msa0232850 | Msa1270240 | 0.859281 | 4.608852e-63 | -8.615850e-47 |
| Msa0235140 | Msa1270240 | 0.818442 | 1.955937e-52 | -8.615850e-47 |
| Msa1230430 | Msa1270240 | 0.838887 | 2.201522e-57 | -8.615850e-47 |
| Msa1246880 | Msa1270240 | 0.852207 | 5.372747e-61 | -8.615850e-47 |
| Msa1248310 | Msa1270240 | 0.803799 | 2.934398e-49 | -8.615850e-47 |
| Msa1260100 | Msa1270240 | 0.841841 | 3.720194e-58 | -8.615850e-47 |
| Msa1269670 | Msa1270240 | 0.918318 | 1.806452e-86 | -8.615850e-47 |
| Msa1270230 | Msa1270240 | 0.919276 | 5.508661e-87 | -8.615850e-47 |
| Msa1270240 | Msa1270270 | 0.891555 | 3.568431e-74 | -8.615850e-47 |
| Msa1270240 | Msa1273230 | 0.827747 | 1.318870e-54 | -8.615850e-47 |
| Msa1270240 | Msa1283330 | 0.931435 | 3.795937e-94 | -8.615850e-47 |
| Msa1270240 | Msa1284680 | 0.803333 | 3.665384e-49 | -8.615850e-47 |
| Msa1270240 | Msa1285930 | 0.908485 | 1.623409e-81 | -8.615850e-47 |
| Msa1270240 | Msa1287800 | 0.911065 | 9.269557e-83 | -8.615850e-47 |
| Msa1270240 | Msa1287810 | 0.915309 | 6.858912e-85 | -8.615850e-47 |
| Msa1270240 | Msa1287820 | 0.832106 | 1.142462e-55 | -8.615850e-47 |
| Msa1270240 | Msa1287830 | 0.836732 | 7.873718e-57 | -8.615850e-47 |
| Msa1270240 | Msa1289420 | 0.829520 | 4.916800e-55 | -8.615850e-47 |
| Msa1270240 | Msa1289430 | 0.863061 | 3.255910e-64 | -8.615850e-47 |
| Msa1270240 | Msa1297210 | 0.839263 | 1.759695e-57 | -8.615850e-47 |
| Msa1270240 | Msa1305480 | 0.834374 | 3.109755e-56 | -8.615850e-47 |
| Msa1270240 | Msa1307890 | 0.892036 | 2.297742e-74 | -8.615850e-47 |
| Msa1270240 | Msa1310120 | 0.822591 | 2.182899e-53 | -8.615850e-47 |
| Msa1270240 | Msa1314280 | 0.853425 | 2.410454e-61 | -8.615850e-47 |
| Msa1270240 | Msa1320300 | 0.850584 | 1.545466e-60 | -8.615850e-47 |
| Msa1270240 | Msa1321560 | 0.835185 | 1.944487e-56 | -8.615850e-47 |
| Msa1270240 | Msa1340590 | 0.856106 | 4.026108e-62 | -8.615850e-47 |
| Msa1270240 | Msa1342200 | 0.862657 | 4.339620e-64 | -8.615850e-47 |
| Msa1270240 | Msa1344520 | 0.801199 | 1.007795e-48 | -8.615850e-47 |
| Msa1270240 | Msa1369430 | 0.828326 | 9.568289e-55 | -8.615850e-47 |
| Msa1270240 | Msa1370210 | 0.843017 | 1.814466e-58 | -8.615850e-47 |
| Msa1270240 | Msa1382690 | 0.823356 | 1.447627e-53 | -8.615850e-47 |
| Msa1270240 | Msa1382700 | 0.829929 | 3.908817e-55 | -8.615850e-47 |
| Msa1270240 | Msa1386330 | 0.842583 | 2.367325e-58 | -8.615850e-47 |
| Msa1270240 | Msa1397150 | 0.812929 | 3.310195e-51 | -8.615850e-47 |
| Msa1270240 | Msa1397580 | 0.856137 | 3.943496e-62 | -8.615850e-47 |
| Msa1270240 | Msa1397860 | 0.800244 | 1.578719e-48 | -8.615850e-47 |
| Msa1270240 | Msa1402790 | 0.825738 | 3.978811e-54 | -8.615850e-47 |
| Msa1270240 | Msa1404000 | 0.912926 | 1.111769e-83 | -8.615850e-47 |
| Msa1270240 | Msa1408780 | 0.841378 | 4.927300e-58 | -8.615850e-47 |
| Msa1270240 | Msa1415310 | 0.888649 | 4.895698e-73 | -8.615850e-47 |
| Msa1270240 | Msa1422180 | 0.852318 | 4.995118e-61 | -8.615850e-47 |
| Msa1270240 | Msa1433120 | 0.888701 | 4.672819e-73 | -8.615850e-47 |
| Msa1270240 | Msa1438250 | 0.800122 | 1.671464e-48 | -8.615850e-47 |
| Msa1270240 | Msa1451190 | 0.831205 | 1.905112e-55 | -8.615850e-47 |
| Msa1270240 | Msa1451570 | 0.834227 | 3.385535e-56 | -8.615850e-47 |
| Msa0365500 | Msa1270240 | 0.884605 | 1.662691e-71 | -8.615850e-47 |
| Msa0366580 | Msa1270240 | 0.841514 | 4.536784e-58 | -8.615850e-47 |
| Msa0369730 | Msa1270240 | 0.803609 | 3.212094e-49 | -8.615850e-47 |
| Msa0371730 | Msa1270240 | 0.801986 | 6.949162e-49 | -8.615850e-47 |
| Msa0384800 | Msa1270240 | 0.887074 | 1.963617e-72 | -8.615850e-47 |
| Msa0384890 | Msa1270240 | 0.833644 | 4.738136e-56 | -8.615850e-47 |
| Msa0394970 | Msa1270240 | 0.846725 | 1.813252e-59 | -8.615850e-47 |
| Msa0406120 | Msa1270240 | 0.865607 | 5.223897e-65 | -8.615850e-47 |
| Msa0406280 | Msa1270240 | 0.815667 | 8.222560e-52 | -8.615850e-47 |
| Msa0407750 | Msa1270240 | 0.834054 | 3.741862e-56 | -8.615850e-47 |
| Msa0407960 | Msa1270240 | 0.809875 | 1.524408e-50 | -8.615850e-47 |
| Msa0414410 | Msa1270240 | 0.880951 | 3.594910e-70 | -8.615850e-47 |
| Msa0414420 | Msa1270240 | 0.908280 | 2.031365e-81 | -8.615850e-47 |
| Msa0423020 | Msa1270240 | 0.819987 | 8.702651e-53 | -8.615850e-47 |
| Msa0430420 | Msa1270240 | 0.803699 | 3.077713e-49 | -8.615850e-47 |
| Msa0435230 | Msa1270240 | 0.832844 | 7.495204e-56 | -8.615850e-47 |
| Msa0436780 | Msa1270240 | 0.850178 | 2.008432e-60 | -8.615850e-47 |
| Msa0436800 | Msa1270240 | 0.831767 | 1.384763e-55 | -8.615850e-47 |
| Msa0437990 | Msa1270240 | 0.801948 | 7.076170e-49 | -8.615850e-47 |
| Msa0438620 | Msa1270240 | 0.881166 | 3.008956e-70 | -8.615850e-47 |
| Msa0444130 | Msa1270240 | 0.804996 | 1.651607e-49 | -8.615850e-47 |
| Msa0450000 | Msa1270240 | 0.872021 | 4.377322e-67 | -8.615850e-47 |
| Msa0450570 | Msa1270240 | 0.861678 | 8.665314e-64 | -8.615850e-47 |
| Msa0451730 | Msa1270240 | 0.851534 | 8.335548e-61 | -8.615850e-47 |
| Msa0452620 | Msa1270240 | 0.801284 | 9.683050e-49 | -8.615850e-47 |
| Msa0452900 | Msa1270240 | 0.921406 | 3.726799e-88 | -8.615850e-47 |
| Msa0453120 | Msa1270240 | 0.894605 | 2.106567e-75 | -8.615850e-47 |
| Msa0454370 | Msa1270240 | 0.838314 | 3.095997e-57 | -8.615850e-47 |
| Msa0454910 | Msa1270240 | 0.880660 | 4.570373e-70 | -8.615850e-47 |
| Msa0459160 | Msa1270240 | 0.859520 | 3.908060e-63 | -8.615850e-47 |
| Msa0459170 | Msa1270240 | 0.845993 | 2.871215e-59 | -8.615850e-47 |
| Msa0479340 | Msa1270240 | 0.820106 | 8.174101e-53 | -8.615850e-47 |
| Msa0482620 | Msa1270240 | 0.800422 | 1.452144e-48 | -8.615850e-47 |
| Msa0979850 | Msa1270240 | 0.808300 | 3.314715e-50 | -8.615850e-47 |
| Msa0981270 | Msa1270240 | 0.815057 | 1.123617e-51 | -8.615850e-47 |
| Msa0981370 | Msa1270240 | 0.865003 | 8.090579e-65 | -8.615850e-47 |
| Msa0989060 | Msa1270240 | 0.879884 | 8.651983e-70 | -8.615850e-47 |
| Msa0989890 | Msa1270240 | 0.800638 | 1.312260e-48 | -8.615850e-47 |
| Msa0991820 | Msa1270240 | 0.801577 | 8.432629e-49 | -8.615850e-47 |
| Msa1016280 | Msa1270240 | 0.899875 | 1.284422e-77 | -8.615850e-47 |
| Msa1023050 | Msa1270240 | 0.820358 | 7.156116e-53 | -8.615850e-47 |
| Msa1024240 | Msa1270240 | 0.869984 | 2.054390e-66 | -8.615850e-47 |
| Msa1025360 | Msa1270240 | 0.921397 | 3.772891e-88 | -8.615850e-47 |
| Msa1025370 | Msa1270240 | 0.911175 | 8.188373e-83 | -8.615850e-47 |
| Msa1028230 | Msa1270240 | 0.801394 | 9.194591e-49 | -8.615850e-47 |
| Msa1030060 | Msa1270240 | 0.824019 | 1.012789e-53 | -8.615850e-47 |
| Msa1037200 | Msa1270240 | 0.804766 | 1.845495e-49 | -8.615850e-47 |
| Msa1042430 | Msa1270240 | 0.808824 | 2.561149e-50 | -8.615850e-47 |
| Msa1044830 | Msa1270240 | 0.919616 | 3.600704e-87 | -8.615850e-47 |
| Msa1044840 | Msa1270240 | 0.922488 | 9.213621e-89 | -8.615850e-47 |
| Msa1054790 | Msa1270240 | 0.810102 | 1.362184e-50 | -8.615850e-47 |
| Msa1060840 | Msa1270240 | 0.848909 | 4.538471e-60 | -8.615850e-47 |
| Msa1062810 | Msa1270240 | 0.815844 | 7.506091e-52 | -8.615850e-47 |
| Msa1077460 | Msa1270240 | 0.820298 | 7.385357e-53 | -8.615850e-47 |
| Msa1079180 | Msa1270240 | 0.800984 | 1.114944e-48 | -8.615850e-47 |
| Msa1092990 | Msa1270240 | 0.901029 | 4.049538e-78 | -8.615850e-47 |
| Msa1096580 | Msa1270240 | 0.821680 | 3.550407e-53 | -8.615850e-47 |
| Msa1100980 | Msa1270240 | 0.920976 | 6.455390e-88 | -8.615850e-47 |
| Msa0247260 | Msa1270240 | 0.812044 | 5.168193e-51 | -8.615850e-47 |
| Msa0251320 | Msa1270240 | 0.808057 | 3.734530e-50 | -8.615850e-47 |
| Msa0256440 | Msa1270240 | 0.811783 | 5.889263e-51 | -8.615850e-47 |
| Msa0267000 | Msa1270240 | 0.915641 | 4.622994e-85 | -8.615850e-47 |
| Msa0267010 | Msa1270240 | 0.915200 | 7.807256e-85 | -8.615850e-47 |
| Msa0270520 | Msa1270240 | 0.858518 | 7.799891e-63 | -8.615850e-47 |
| Msa0285810 | Msa1270240 | 0.821936 | 3.097934e-53 | -8.615850e-47 |
| Msa0304170 | Msa1270240 | 0.840972 | 6.302224e-58 | -8.615850e-47 |
| Msa0306460 | Msa1270240 | 0.843466 | 1.376985e-58 | -8.615850e-47 |
| Msa0309020 | Msa1270240 | 0.818275 | 2.134288e-52 | -8.615850e-47 |
| Msa0313760 | Msa1270240 | 0.826493 | 2.632455e-54 | -8.615850e-47 |
| Msa0337900 | Msa1270240 | 0.809327 | 1.998994e-50 | -8.615850e-47 |
| Msa0342240 | Msa1270240 | 0.890667 | 8.006117e-74 | -8.615850e-47 |
| Msa0353190 | Msa1270240 | 0.804700 | 1.904483e-49 | -8.615850e-47 |
| Msa0360510 | Msa1270240 | 0.903953 | 2.033615e-79 | -8.615850e-47 |
| Msa0362420 | Msa1270240 | 0.818356 | 2.045303e-52 | -8.615850e-47 |
| Msa0363300 | Msa1270240 | 0.828378 | 9.292466e-55 | -8.615850e-47 |
| Msa0363750 | Msa1270240 | 0.802760 | 4.813496e-49 | -8.615850e-47 |
| Msa1109440 | Msa1270240 | 0.872249 | 3.675699e-67 | -8.615850e-47 |
| Msa1112300 | Msa1270240 | 0.826222 | 3.053686e-54 | -8.615850e-47 |
| Msa1121200 | Msa1270240 | 0.887784 | 1.052599e-72 | -8.615850e-47 |
| Msa1135220 | Msa1270240 | 0.807674 | 4.504333e-50 | -8.615850e-47 |
| Msa1135740 | Msa1270240 | 0.901355 | 2.913584e-78 | -8.615850e-47 |
| Msa1136090 | Msa1270240 | 0.841467 | 4.667829e-58 | -8.615850e-47 |
| Msa1137690 | Msa1270240 | 0.802464 | 5.540670e-49 | -8.615850e-47 |
| Msa1146100 | Msa1270240 | 0.801030 | 1.091440e-48 | -8.615850e-47 |
| Msa1146110 | Msa1270240 | 0.885958 | 5.187955e-72 | -8.615850e-47 |
| Msa1149360 | Msa1270240 | 0.843842 | 1.092272e-58 | -8.615850e-47 |
| Msa1150370 | Msa1270240 | 0.847516 | 1.100428e-59 | -8.615850e-47 |
| Msa1160670 | Msa1270240 | 0.822662 | 2.100570e-53 | -8.615850e-47 |
| Msa1164120 | Msa1270240 | 0.819481 | 1.135511e-52 | -8.615850e-47 |
| Msa1173920 | Msa1270240 | 0.853079 | 3.028922e-61 | -8.615850e-47 |
| Msa1178340 | Msa1270240 | 0.815913 | 7.245946e-52 | -8.615850e-47 |
| Msa1182090 | Msa1270240 | 0.819998 | 8.653417e-53 | -8.615850e-47 |
| Msa1184420 | Msa1270240 | 0.808913 | 2.451187e-50 | -8.615850e-47 |
| Msa1187940 | Msa1270240 | 0.907572 | 4.385343e-81 | -8.615850e-47 |
| Msa1187950 | Msa1270240 | 0.901252 | 3.234106e-78 | -8.615850e-47 |
| Msa1192640 | Msa1270240 | 0.903457 | 3.402232e-79 | -8.615850e-47 |
| Msa1193730 | Msa1270240 | 0.835787 | 1.369389e-56 | -8.615850e-47 |
| Msa0485030 | Msa1270240 | 0.824898 | 6.289214e-54 | -8.615850e-47 |
| Msa0491590 | Msa1270240 | 0.854608 | 1.098966e-61 | -8.615850e-47 |
| Msa0502760 | Msa1270240 | 0.863897 | 1.792675e-64 | -8.615850e-47 |
| Msa0505080 | Msa1270240 | 0.810218 | 1.285621e-50 | -8.615850e-47 |
| Msa0506190 | Msa1270240 | 0.806186 | 9.297533e-50 | -8.615850e-47 |
| Msa0506270 | Msa1270240 | 0.876583 | 1.244038e-68 | -8.615850e-47 |
| Msa0534540 | Msa1270240 | 0.847340 | 1.230265e-59 | -8.615850e-47 |
| Msa0548060 | Msa1270240 | 0.818941 | 1.506779e-52 | -8.615850e-47 |
| Msa0564890 | Msa1270240 | 0.881090 | 3.204789e-70 | -8.615850e-47 |
| Msa0590780 | Msa1270240 | 0.802770 | 4.790975e-49 | -8.615850e-47 |
| Msa0596150 | Msa1270240 | 0.831148 | 1.967433e-55 | -8.615850e-47 |
| Msa0600700 | Msa1270240 | 0.801101 | 1.055425e-48 | -8.615850e-47 |
| Msa0845930 | Msa1270240 | 0.833808 | 4.310636e-56 | -8.615850e-47 |
| Msa0846210 | Msa1270240 | 0.844643 | 6.656211e-59 | -8.615850e-47 |
| Msa0846330 | Msa1270240 | 0.868304 | 7.212413e-66 | -8.615850e-47 |
| Msa0846350 | Msa1270240 | 0.881858 | 1.691389e-70 | -8.615850e-47 |
| Msa0848960 | Msa1270240 | 0.812241 | 4.681543e-51 | -8.615850e-47 |
| Msa0851390 | Msa1270240 | 0.821024 | 5.028944e-53 | -8.615850e-47 |
| Msa0854980 | Msa1270240 | 0.842313 | 2.790696e-58 | -8.615850e-47 |
| Msa0858850 | Msa1270240 | 0.813721 | 2.217312e-51 | -8.615850e-47 |
| Msa0858980 | Msa1270240 | 0.834759 | 2.488497e-56 | -8.615850e-47 |
| Msa0864060 | Msa1270240 | 0.802631 | 5.119491e-49 | -8.615850e-47 |
| Msa0865320 | Msa1270240 | 0.901837 | 1.788844e-78 | -8.615850e-47 |
| Msa0872230 | Msa1270240 | 0.843898 | 1.055705e-58 | -8.615850e-47 |
| Msa0873460 | Msa1270240 | 0.821027 | 5.020987e-53 | -8.615850e-47 |
| Msa0885280 | Msa1270240 | 0.828495 | 8.710767e-55 | -8.615850e-47 |
| Msa0885290 | Msa1270240 | 0.884745 | 1.475079e-71 | -8.615850e-47 |
| Msa0887920 | Msa1270240 | 0.858332 | 8.859279e-63 | -8.615850e-47 |
| Msa0888370 | Msa1270240 | 0.855450 | 6.259041e-62 | -8.615850e-47 |
| Msa0888420 | Msa1270240 | 0.836584 | 8.590178e-57 | -8.615850e-47 |
| Msa0890320 | Msa1270240 | 0.802750 | 4.838497e-49 | -8.615850e-47 |
| Msa0896080 | Msa1270240 | 0.846913 | 1.611249e-59 | -8.615850e-47 |
| Msa0899430 | Msa1270240 | 0.802439 | 5.608250e-49 | -8.615850e-47 |
| Msa0899450 | Msa1270240 | 0.801605 | 8.320364e-49 | -8.615850e-47 |
| Msa0907260 | Msa1270240 | 0.838595 | 2.620134e-57 | -8.615850e-47 |
| Msa0914760 | Msa1270240 | 0.801818 | 7.524003e-49 | -8.615850e-47 |
| Msa0922720 | Msa1270240 | 0.803792 | 2.943950e-49 | -8.615850e-47 |
| Msa0952190 | Msa1270240 | 0.811576 | 6.533044e-51 | -8.615850e-47 |
| Msa0952350 | Msa1270240 | 0.812975 | 3.235028e-51 | -8.615850e-47 |
| Msa0952720 | Msa1270240 | 0.802072 | 6.672038e-49 | -8.615850e-47 |
| Msa0954910 | Msa1270240 | 0.821203 | 4.573415e-53 | -8.615850e-47 |
| Msa0956270 | Msa1270240 | 0.849496 | 3.116158e-60 | -8.615850e-47 |
| Msa0957680 | Msa1270240 | 0.824290 | 8.746761e-54 | -8.615850e-47 |
| Msa0957860 | Msa1270240 | 0.849625 | 2.867680e-60 | -8.615850e-47 |
| Msa0957960 | Msa1270240 | 0.849174 | 3.831027e-60 | -8.615850e-47 |
| Msa0979410 | Msa1270240 | 0.816347 | 5.796667e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270240 | MtrunA17_Chr8g0355041 | 75.238 | 105 | 21 | 2 | 8 | 107 | 483 | 587 | 1.06e-43 | 150 |
| Msa1270240 | MtrunA17_Chr5g0415181 | 55.000 | 100 | 25 | 2 | 8 | 107 | 400 | 479 | 5.25e-24 | 95.1 |
| Msa1270240 | MtrunA17_Chr8g0355051 | 54.762 | 84 | 32 | 3 | 29 | 107 | 1 | 83 | 5.04e-21 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270240 | AT1G60560.1 | 60.000 | 105 | 37 | 2 | 8 | 107 | 481 | 585 | 1.28e-34 | 125 |
Find 19 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCACAGTGGTAGGCTTCT+TGG | 0.245815 | 8_3:+3696397 | None:intergenic |
| TTCATTCTGTGATAGGTTCT+TGG | 0.310754 | 8_3:-3696079 | Msa1270240:CDS |
| GTCTTTCTTGCGCACAACTT+TGG | 0.394069 | 8_3:+3696143 | None:intergenic |
| TTGAGTTGCATTCAAGCTAC+TGG | 0.449714 | 8_3:-3696298 | Msa1270240:CDS |
| AACACATATAGTGTGGAATC+GGG | 0.456647 | 8_3:-3696112 | Msa1270240:CDS |
| TAACACATATAGTGTGGAAT+CGG | 0.468672 | 8_3:-3696113 | Msa1270240:CDS |
| GCTTTCAGTTTCACAGTGGT+AGG | 0.491986 | 8_3:+3696389 | None:intergenic |
| TCTTTCCAGAATGTGAAAGA+AGG | 0.512792 | 8_3:-3696248 | Msa1270240:intron |
| TCTAAGGTGACAGCAGAGTC+GGG | 0.520386 | 8_3:+3696186 | None:intergenic |
| GTCTAAGGTGACAGCAGAGT+CGG | 0.532861 | 8_3:+3696185 | None:intergenic |
| TGCGCACAACTTTGGCAAAG+AGG | 0.548038 | 8_3:+3696151 | None:intergenic |
| GTTATATTGCTTCTACGTCA+TGG | 0.555768 | 8_3:-3696226 | Msa1270240:CDS |
| GCAACTCAATTGTTACCTTG+TGG | 0.556438 | 8_3:+3696312 | None:intergenic |
| AGTAGATTGTTTAGTCCACA+AGG | 0.612089 | 8_3:-3696327 | Msa1270240:CDS |
| ATAGGTTCTTGGTCATTGCA+TGG | 0.631361 | 8_3:-3696068 | Msa1270240:CDS |
| GCAGCTTAACACATATAGTG+TGG | 0.647606 | 8_3:-3696119 | Msa1270240:CDS |
| GCACAACTTTGGCAAAGAGG+CGG | 0.647684 | 8_3:+3696154 | None:intergenic |
| ACACATATAGTGTGGAATCG+GGG | 0.674995 | 8_3:-3696111 | Msa1270240:CDS |
| TTTGGCTTTCAGTTTCACAG+TGG | 0.743653 | 8_3:+3696385 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAGTATTAGTCTTTTT+TGG | - | chr8_3:3696196-3696215 | Msa1270240:CDS | 15.0% |
| !!! | TTAAAAGTATTAGTCTTTTT+TGG | - | chr8_3:3696196-3696215 | Msa1270240:CDS | 15.0% |
| !!! | AAAAATTTGATAACGTTACA+AGG | - | chr8_3:3696309-3696328 | Msa1270240:CDS | 20.0% |
| !! | AACATTTCAGATGTAATATA+TGG | + | chr8_3:3696364-3696383 | None:intergenic | 20.0% |
| !!! | AAAAATGACAAATTTTCTAC+TGG | - | chr8_3:3696493-3696512 | Msa1270240:intron | 20.0% |
| !!! | AAAATGACAAATTTTCTACT+GGG | - | chr8_3:3696494-3696513 | Msa1270240:intron | 20.0% |
| !! | ATGTGAATCATCAAAAAATT+TGG | + | chr8_3:3696553-3696572 | None:intergenic | 20.0% |
| !!! | AAAAATTTGATAACGTTACA+AGG | - | chr8_3:3696309-3696328 | Msa1270240:CDS | 20.0% |
| !! | AACATTTCAGATGTAATATA+TGG | + | chr8_3:3696364-3696383 | None:intergenic | 20.0% |
| !!! | AAAAATGACAAATTTTCTAC+TGG | - | chr8_3:3696493-3696512 | Msa1270240:intron | 20.0% |
| !!! | AAAATGACAAATTTTCTACT+GGG | - | chr8_3:3696494-3696513 | Msa1270240:intron | 20.0% |
| !! | ATGTGAATCATCAAAAAATT+TGG | + | chr8_3:3696553-3696572 | None:intergenic | 20.0% |
| !! | TCATTTTGCTTCAAATGTTT+CGG | - | chr8_3:3696388-3696407 | Msa1270240:CDS | 25.0% |
| !!! | TTTTTTGATGATTCACATCT+CGG | - | chr8_3:3696555-3696574 | Msa1270240:intron | 25.0% |
| !! | TCATTTTGCTTCAAATGTTT+CGG | - | chr8_3:3696388-3696407 | Msa1270240:CDS | 25.0% |
| !!! | TTTTTTGATGATTCACATCT+CGG | - | chr8_3:3696555-3696574 | Msa1270240:intron | 25.0% |
| CAGAATATGTGGTAACAATA+CGG | + | chr8_3:3696335-3696354 | None:intergenic | 30.0% | |
| ! | CATTTTGCTTCAAATGTTTC+GGG | - | chr8_3:3696389-3696408 | Msa1270240:CDS | 30.0% |
| TATAACCTTCTTTCACATTC+TGG | + | chr8_3:3696677-3696696 | None:intergenic | 30.0% | |
| TAACACATATAGTGTGGAAT+CGG | - | chr8_3:3696804-3696823 | Msa1270240:intron | 30.0% | |
| ! | CTGAATTTTCATTCTGTGAT+AGG | - | chr8_3:3696831-3696850 | Msa1270240:intron | 30.0% |
| CAGAATATGTGGTAACAATA+CGG | + | chr8_3:3696335-3696354 | None:intergenic | 30.0% | |
| ! | CATTTTGCTTCAAATGTTTC+GGG | - | chr8_3:3696389-3696408 | Msa1270240:CDS | 30.0% |
| TATAACCTTCTTTCACATTC+TGG | + | chr8_3:3696677-3696696 | None:intergenic | 30.0% | |
| TAACACATATAGTGTGGAAT+CGG | - | chr8_3:3696804-3696823 | Msa1270240:intron | 30.0% | |
| ! | CTGAATTTTCATTCTGTGAT+AGG | - | chr8_3:3696831-3696850 | Msa1270240:intron | 30.0% |
| CGTATTGTTACCACATATTC+TGG | - | chr8_3:3696333-3696352 | Msa1270240:CDS | 35.0% | |
| ! | TCGTTGATTATGTTAGCTTG+TGG | - | chr8_3:3696425-3696444 | Msa1270240:intron | 35.0% |
| AGTAGATTGTTTAGTCCACA+AGG | - | chr8_3:3696590-3696609 | Msa1270240:intron | 35.0% | |
| TCTTTCCAGAATGTGAAAGA+AGG | - | chr8_3:3696669-3696688 | Msa1270240:intron | 35.0% | |
| GTTATATTGCTTCTACGTCA+TGG | - | chr8_3:3696691-3696710 | Msa1270240:intron | 35.0% | |
| AACACATATAGTGTGGAATC+GGG | - | chr8_3:3696805-3696824 | Msa1270240:intron | 35.0% | |
| TTCATTCTGTGATAGGTTCT+TGG | - | chr8_3:3696838-3696857 | Msa1270240:intron | 35.0% | |
| CGTATTGTTACCACATATTC+TGG | - | chr8_3:3696333-3696352 | Msa1270240:CDS | 35.0% | |
| ! | TCGTTGATTATGTTAGCTTG+TGG | - | chr8_3:3696425-3696444 | Msa1270240:intron | 35.0% |
| AGTAGATTGTTTAGTCCACA+AGG | - | chr8_3:3696590-3696609 | Msa1270240:intron | 35.0% | |
| TCTTTCCAGAATGTGAAAGA+AGG | - | chr8_3:3696669-3696688 | Msa1270240:intron | 35.0% | |
| GTTATATTGCTTCTACGTCA+TGG | - | chr8_3:3696691-3696710 | Msa1270240:intron | 35.0% | |
| AACACATATAGTGTGGAATC+GGG | - | chr8_3:3696805-3696824 | Msa1270240:intron | 35.0% | |
| TTCATTCTGTGATAGGTTCT+TGG | - | chr8_3:3696838-3696857 | Msa1270240:intron | 35.0% | |
| TATGGTGAAGCCAGAATATG+TGG | + | chr8_3:3696346-3696365 | None:intergenic | 40.0% | |
| !! | TTTGGCTTTCAGTTTCACAG+TGG | + | chr8_3:3696535-3696554 | None:intergenic | 40.0% |
| GCAACTCAATTGTTACCTTG+TGG | + | chr8_3:3696608-3696627 | None:intergenic | 40.0% | |
| ! | TTGAGTTGCATTCAAGCTAC+TGG | - | chr8_3:3696619-3696638 | Msa1270240:intron | 40.0% |
| GCAGCTTAACACATATAGTG+TGG | - | chr8_3:3696798-3696817 | Msa1270240:intron | 40.0% | |
| ACACATATAGTGTGGAATCG+GGG | - | chr8_3:3696806-3696825 | Msa1270240:intron | 40.0% | |
| ATAGGTTCTTGGTCATTGCA+TGG | - | chr8_3:3696849-3696868 | Msa1270240:intron | 40.0% | |
| TATGGTGAAGCCAGAATATG+TGG | + | chr8_3:3696346-3696365 | None:intergenic | 40.0% | |
| !! | TTTGGCTTTCAGTTTCACAG+TGG | + | chr8_3:3696535-3696554 | None:intergenic | 40.0% |
| GCAACTCAATTGTTACCTTG+TGG | + | chr8_3:3696608-3696627 | None:intergenic | 40.0% | |
| ! | TTGAGTTGCATTCAAGCTAC+TGG | - | chr8_3:3696619-3696638 | Msa1270240:intron | 40.0% |
| GCAGCTTAACACATATAGTG+TGG | - | chr8_3:3696798-3696817 | Msa1270240:intron | 40.0% | |
| ACACATATAGTGTGGAATCG+GGG | - | chr8_3:3696806-3696825 | Msa1270240:intron | 40.0% | |
| ATAGGTTCTTGGTCATTGCA+TGG | - | chr8_3:3696849-3696868 | Msa1270240:intron | 40.0% | |
| TTTCACAGTGGTAGGCTTCT+TGG | + | chr8_3:3696523-3696542 | None:intergenic | 45.0% | |
| GCTTTCAGTTTCACAGTGGT+AGG | + | chr8_3:3696531-3696550 | None:intergenic | 45.0% | |
| ! | GAGGCGGTTTTTATCGTCTA+AGG | + | chr8_3:3696750-3696769 | None:intergenic | 45.0% |
| GTCTTTCTTGCGCACAACTT+TGG | + | chr8_3:3696777-3696796 | None:intergenic | 45.0% | |
| TTTCACAGTGGTAGGCTTCT+TGG | + | chr8_3:3696523-3696542 | None:intergenic | 45.0% | |
| GCTTTCAGTTTCACAGTGGT+AGG | + | chr8_3:3696531-3696550 | None:intergenic | 45.0% | |
| ! | GAGGCGGTTTTTATCGTCTA+AGG | + | chr8_3:3696750-3696769 | None:intergenic | 45.0% |
| GTCTTTCTTGCGCACAACTT+TGG | + | chr8_3:3696777-3696796 | None:intergenic | 45.0% | |
| AGCAGAGGAAAGGAAGGGTA+AGG | + | chr8_3:3696454-3696473 | None:intergenic | 50.0% | |
| TGCACAGCAGAGGAAAGGAA+GGG | + | chr8_3:3696459-3696478 | None:intergenic | 50.0% | |
| GTTTCTGCACAGCAGAGGAA+AGG | + | chr8_3:3696464-3696483 | None:intergenic | 50.0% | |
| ! | TCTAAGGTGACAGCAGAGTC+GGG | + | chr8_3:3696734-3696753 | None:intergenic | 50.0% |
| ! | GTCTAAGGTGACAGCAGAGT+CGG | + | chr8_3:3696735-3696754 | None:intergenic | 50.0% |
| GCACAACTTTGGCAAAGAGG+CGG | + | chr8_3:3696766-3696785 | None:intergenic | 50.0% | |
| TGCGCACAACTTTGGCAAAG+AGG | + | chr8_3:3696769-3696788 | None:intergenic | 50.0% | |
| AGCAGAGGAAAGGAAGGGTA+AGG | + | chr8_3:3696454-3696473 | None:intergenic | 50.0% | |
| TGCACAGCAGAGGAAAGGAA+GGG | + | chr8_3:3696459-3696478 | None:intergenic | 50.0% | |
| GTTTCTGCACAGCAGAGGAA+AGG | + | chr8_3:3696464-3696483 | None:intergenic | 50.0% | |
| ! | TCTAAGGTGACAGCAGAGTC+GGG | + | chr8_3:3696734-3696753 | None:intergenic | 50.0% |
| ! | GTCTAAGGTGACAGCAGAGT+CGG | + | chr8_3:3696735-3696754 | None:intergenic | 50.0% |
| GCACAACTTTGGCAAAGAGG+CGG | + | chr8_3:3696766-3696785 | None:intergenic | 50.0% | |
| TGCGCACAACTTTGGCAAAG+AGG | + | chr8_3:3696769-3696788 | None:intergenic | 50.0% | |
| CTGCACAGCAGAGGAAAGGA+AGG | + | chr8_3:3696460-3696479 | None:intergenic | 55.0% | |
| GTCACGTTTCTGCACAGCAG+AGG | + | chr8_3:3696469-3696488 | None:intergenic | 55.0% | |
| CTGCACAGCAGAGGAAAGGA+AGG | + | chr8_3:3696460-3696479 | None:intergenic | 55.0% | |
| GTCACGTTTCTGCACAGCAG+AGG | + | chr8_3:3696469-3696488 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 3696065 | 3696874 | 3696065 | ID=Msa1270240;Name=Msa1270240 |
| chr8_3 | mRNA | 3696065 | 3696874 | 3696065 | ID=Msa1270240-mRNA-1;Parent=Msa1270240;Name=Msa1270240-mRNA-1;_AED=0.49;_eAED=0.55;_QI=0|0|0|0.66|0|0|3|0|114 |
| chr8_3 | exon | 3696871 | 3696874 | 3696871 | ID=Msa1270240-mRNA-1:exon:1202;Parent=Msa1270240-mRNA-1 |
| chr8_3 | exon | 3696276 | 3696419 | 3696276 | ID=Msa1270240-mRNA-1:exon:1201;Parent=Msa1270240-mRNA-1 |
| chr8_3 | exon | 3696065 | 3696261 | 3696065 | ID=Msa1270240-mRNA-1:exon:1200;Parent=Msa1270240-mRNA-1 |
| chr8_3 | CDS | 3696871 | 3696874 | 3696871 | ID=Msa1270240-mRNA-1:cds;Parent=Msa1270240-mRNA-1 |
| chr8_3 | CDS | 3696276 | 3696419 | 3696276 | ID=Msa1270240-mRNA-1:cds;Parent=Msa1270240-mRNA-1 |
| chr8_3 | CDS | 3696065 | 3696261 | 3696065 | ID=Msa1270240-mRNA-1:cds;Parent=Msa1270240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
