Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534540 | XP_004506639.1 | 49.696 | 493 | 139 | 11 | 1 | 418 | 6 | 464 | 7.56e-137 | 411 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534540 | A0A1S2YLM9 | 49.696 | 493 | 139 | 11 | 1 | 418 | 6 | 464 | 3.61e-137 | 411 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa0534540 | 0.803245 | 3.821586e-49 | -8.615850e-47 |
| Msa0016580 | Msa0534540 | 0.815824 | 7.585018e-52 | -8.615850e-47 |
| Msa0092630 | Msa0534540 | 0.806892 | 6.596040e-50 | -8.615850e-47 |
| Msa0095970 | Msa0534540 | 0.800769 | 1.233763e-48 | -8.615850e-47 |
| Msa0102070 | Msa0534540 | 0.837873 | 4.019145e-57 | -8.615850e-47 |
| Msa0124100 | Msa0534540 | 0.812720 | 3.678322e-51 | -8.615850e-47 |
| Msa0142220 | Msa0534540 | 0.803594 | 3.235944e-49 | -8.615850e-47 |
| Msa0153910 | Msa0534540 | 0.805965 | 1.034494e-49 | -8.615850e-47 |
| Msa0200000 | Msa0534540 | 0.822856 | 1.894124e-53 | -8.615850e-47 |
| Msa0227480 | Msa0534540 | 0.860665 | 1.763460e-63 | -8.615850e-47 |
| Msa0231000 | Msa0534540 | 0.801199 | 1.007847e-48 | -8.615850e-47 |
| Msa0365500 | Msa0534540 | 0.827185 | 1.799284e-54 | -8.615850e-47 |
| Msa0384800 | Msa0534540 | 0.813334 | 2.697735e-51 | -8.615850e-47 |
| Msa0384890 | Msa0534540 | 0.827307 | 1.682127e-54 | -8.615850e-47 |
| Msa0406120 | Msa0534540 | 0.804117 | 2.520102e-49 | -8.615850e-47 |
| Msa0414410 | Msa0534540 | 0.837590 | 4.750735e-57 | -8.615850e-47 |
| Msa0414420 | Msa0534540 | 0.860938 | 1.457203e-63 | -8.615850e-47 |
| Msa0436780 | Msa0534540 | 0.820142 | 8.017408e-53 | -8.615850e-47 |
| Msa0438620 | Msa0534540 | 0.842151 | 3.081118e-58 | -8.615850e-47 |
| Msa0450000 | Msa0534540 | 0.884023 | 2.730816e-71 | -8.615850e-47 |
| Msa0450570 | Msa0534540 | 0.808111 | 3.635959e-50 | -8.615850e-47 |
| Msa0452900 | Msa0534540 | 0.873614 | 1.282346e-67 | -8.615850e-47 |
| Msa0453120 | Msa0534540 | 0.834826 | 2.393954e-56 | -8.615850e-47 |
| Msa0454370 | Msa0534540 | 0.818223 | 2.192751e-52 | -8.615850e-47 |
| Msa0459170 | Msa0534540 | 0.811492 | 6.815773e-51 | -8.615850e-47 |
| Msa0267000 | Msa0534540 | 0.858790 | 6.466614e-63 | -8.615850e-47 |
| Msa0267010 | Msa0534540 | 0.857285 | 1.811780e-62 | -8.615850e-47 |
| Msa0270520 | Msa0534540 | 0.801468 | 8.875579e-49 | -8.615850e-47 |
| Msa0342240 | Msa0534540 | 0.833529 | 5.059945e-56 | -8.615850e-47 |
| Msa0360510 | Msa0534540 | 0.852973 | 3.247323e-61 | -8.615850e-47 |
| Msa0491590 | Msa0534540 | 0.826834 | 2.182479e-54 | -8.615850e-47 |
| Msa0506270 | Msa0534540 | 0.822675 | 2.086400e-53 | -8.615850e-47 |
| Msa0534540 | Msa0564890 | 0.836639 | 8.315698e-57 | -8.615850e-47 |
| Msa0534540 | Msa0590780 | 0.889564 | 2.163284e-73 | -8.615850e-47 |
| Msa0534540 | Msa0596150 | 0.831857 | 1.316102e-55 | -8.615850e-47 |
| Msa0534540 | Msa0604350 | 0.809978 | 1.448290e-50 | -8.615850e-47 |
| Msa0534540 | Msa0636170 | 0.814678 | 1.363050e-51 | -8.615850e-47 |
| Msa0534540 | Msa0669310 | 0.883888 | 3.064445e-71 | -8.615850e-47 |
| Msa0534540 | Msa0726140 | 0.834413 | 3.040209e-56 | -8.615850e-47 |
| Msa0534540 | Msa0729800 | 0.831437 | 1.670421e-55 | -8.615850e-47 |
| Msa0534540 | Msa0731560 | 0.847312 | 1.252603e-59 | -8.615850e-47 |
| Msa0534540 | Msa0733290 | 0.838643 | 2.546141e-57 | -8.615850e-47 |
| Msa0534540 | Msa0743810 | 0.842112 | 3.154104e-58 | -8.615850e-47 |
| Msa0534540 | Msa0745060 | 0.837577 | 4.787375e-57 | -8.615850e-47 |
| Msa0534540 | Msa0767720 | 0.828968 | 6.693275e-55 | -8.615850e-47 |
| Msa0534540 | Msa0768290 | 0.824073 | 9.832829e-54 | -8.615850e-47 |
| Msa0534540 | Msa0768370 | 0.815186 | 1.051766e-51 | -8.615850e-47 |
| Msa0534540 | Msa0777870 | 0.819946 | 8.889666e-53 | -8.615850e-47 |
| Msa0534540 | Msa0783160 | 0.853599 | 2.147914e-61 | -8.615850e-47 |
| Msa0534540 | Msa0787600 | 0.837995 | 3.739147e-57 | -8.615850e-47 |
| Msa0534540 | Msa0808010 | 0.835759 | 1.392094e-56 | -8.615850e-47 |
| Msa0534540 | Msa0808020 | 0.830208 | 3.343096e-55 | -8.615850e-47 |
| Msa0534540 | Msa0825860 | 0.843192 | 1.629807e-58 | -8.615850e-47 |
| Msa0534540 | Msa0833290 | 0.837448 | 5.167042e-57 | -8.615850e-47 |
| Msa0534540 | Msa0833300 | 0.810217 | 1.286327e-50 | -8.615850e-47 |
| Msa0534540 | Msa0846210 | 0.807316 | 5.364958e-50 | -8.615850e-47 |
| Msa0534540 | Msa0846330 | 0.822890 | 1.859857e-53 | -8.615850e-47 |
| Msa0534540 | Msa0846350 | 0.835180 | 1.949921e-56 | -8.615850e-47 |
| Msa0534540 | Msa0848960 | 0.804959 | 1.681261e-49 | -8.615850e-47 |
| Msa0534540 | Msa0858980 | 0.831299 | 1.805581e-55 | -8.615850e-47 |
| Msa0534540 | Msa0865320 | 0.823946 | 1.053414e-53 | -8.615850e-47 |
| Msa0534540 | Msa0872230 | 0.810459 | 1.140846e-50 | -8.615850e-47 |
| Msa0534540 | Msa0877250 | 0.812905 | 3.349892e-51 | -8.615850e-47 |
| Msa0534540 | Msa0885280 | 0.804376 | 2.225227e-49 | -8.615850e-47 |
| Msa0534540 | Msa0885290 | 0.818504 | 1.893807e-52 | -8.615850e-47 |
| Msa0534540 | Msa0888370 | 0.848272 | 6.811717e-60 | -8.615850e-47 |
| Msa0534540 | Msa0888420 | 0.805694 | 1.179330e-49 | -8.615850e-47 |
| Msa0534540 | Msa0899430 | 0.824344 | 8.490815e-54 | -8.615850e-47 |
| Msa0534540 | Msa0899450 | 0.806444 | 8.203363e-50 | -8.615850e-47 |
| Msa0534540 | Msa0907260 | 0.848220 | 7.043339e-60 | -8.615850e-47 |
| Msa0534540 | Msa0914760 | 0.809965 | 1.457601e-50 | -8.615850e-47 |
| Msa0534540 | Msa0952350 | 0.812673 | 3.766257e-51 | -8.615850e-47 |
| Msa0534540 | Msa0952720 | 0.820768 | 5.762149e-53 | -8.615850e-47 |
| Msa0534540 | Msa0956270 | 0.849446 | 3.217059e-60 | -8.615850e-47 |
| Msa0534540 | Msa0958550 | 0.817445 | 3.284870e-52 | -8.615850e-47 |
| Msa0534540 | Msa0974870 | 0.808311 | 3.295773e-50 | -8.615850e-47 |
| Msa0534540 | Msa0981270 | 0.811193 | 7.910987e-51 | -8.615850e-47 |
| Msa0534540 | Msa0981370 | 0.825579 | 4.339947e-54 | -8.615850e-47 |
| Msa0534540 | Msa0986400 | 0.805894 | 1.071019e-49 | -8.615850e-47 |
| Msa0534540 | Msa0989060 | 0.803593 | 3.237705e-49 | -8.615850e-47 |
| Msa0534540 | Msa0998690 | 0.815820 | 7.599109e-52 | -8.615850e-47 |
| Msa0534540 | Msa1016280 | 0.873883 | 1.040814e-67 | -8.615850e-47 |
| Msa0534540 | Msa1025360 | 0.863058 | 3.262594e-64 | -8.615850e-47 |
| Msa0534540 | Msa1025370 | 0.864378 | 1.269624e-64 | -8.615850e-47 |
| Msa0534540 | Msa1044830 | 0.867539 | 1.270500e-65 | -8.615850e-47 |
| Msa0534540 | Msa1044840 | 0.863962 | 1.711431e-64 | -8.615850e-47 |
| Msa0534540 | Msa1060840 | 0.838394 | 2.951219e-57 | -8.615850e-47 |
| Msa0534540 | Msa1068420 | 0.800287 | 1.546631e-48 | -8.615850e-47 |
| Msa0534540 | Msa1092990 | 0.815929 | 7.184724e-52 | -8.615850e-47 |
| Msa0534540 | Msa1100980 | 0.842959 | 1.879678e-58 | -8.615850e-47 |
| Msa0534540 | Msa1109440 | 0.860806 | 1.597066e-63 | -8.615850e-47 |
| Msa0534540 | Msa1121200 | 0.856614 | 2.856262e-62 | -8.615850e-47 |
| Msa0534540 | Msa1135740 | 0.821703 | 3.506325e-53 | -8.615850e-47 |
| Msa0534540 | Msa1136090 | 0.808216 | 3.453994e-50 | -8.615850e-47 |
| Msa0534540 | Msa1146110 | 0.821681 | 3.547419e-53 | -8.615850e-47 |
| Msa0534540 | Msa1149360 | 0.842757 | 2.128199e-58 | -8.615850e-47 |
| Msa0534540 | Msa1150370 | 0.816507 | 5.335796e-52 | -8.615850e-47 |
| Msa0534540 | Msa1182090 | 0.810605 | 1.060861e-50 | -8.615850e-47 |
| Msa0534540 | Msa1184420 | 0.809669 | 1.688079e-50 | -8.615850e-47 |
| Msa0534540 | Msa1187940 | 0.823978 | 1.035351e-53 | -8.615850e-47 |
| Msa0534540 | Msa1187950 | 0.817852 | 2.659417e-52 | -8.615850e-47 |
| Msa0534540 | Msa1192640 | 0.835974 | 1.227897e-56 | -8.615850e-47 |
| Msa0534540 | Msa1230430 | 0.836489 | 9.083994e-57 | -8.615850e-47 |
| Msa0534540 | Msa1269670 | 0.833991 | 3.879648e-56 | -8.615850e-47 |
| Msa0534540 | Msa1270230 | 0.857981 | 1.126898e-62 | -8.615850e-47 |
| Msa0534540 | Msa1270240 | 0.847340 | 1.230265e-59 | -8.615850e-47 |
| Msa0534540 | Msa1270270 | 0.824126 | 9.558758e-54 | -8.615850e-47 |
| Msa0534540 | Msa1273230 | 0.805743 | 1.152083e-49 | -8.615850e-47 |
| Msa0534540 | Msa1283330 | 0.858365 | 8.661502e-63 | -8.615850e-47 |
| Msa0534540 | Msa1285930 | 0.842579 | 2.372149e-58 | -8.615850e-47 |
| Msa0534540 | Msa1287800 | 0.859779 | 3.265108e-63 | -8.615850e-47 |
| Msa0534540 | Msa1287810 | 0.862778 | 3.981200e-64 | -8.615850e-47 |
| Msa0534540 | Msa1288560 | 0.809425 | 1.904464e-50 | -8.615850e-47 |
| Msa0534540 | Msa1289420 | 0.835313 | 1.804313e-56 | -8.615850e-47 |
| Msa0534540 | Msa1289430 | 0.822522 | 2.265187e-53 | -8.615850e-47 |
| Msa0534540 | Msa1307890 | 0.831252 | 1.854886e-55 | -8.615850e-47 |
| Msa0534540 | Msa1320300 | 0.824884 | 6.335253e-54 | -8.615850e-47 |
| Msa0534540 | Msa1340590 | 0.835672 | 1.464546e-56 | -8.615850e-47 |
| Msa0534540 | Msa1397150 | 0.806561 | 7.749092e-50 | -8.615850e-47 |
| Msa0534540 | Msa1397580 | 0.827521 | 1.494121e-54 | -8.615850e-47 |
| Msa0534540 | Msa1402790 | 0.805053 | 1.607177e-49 | -8.615850e-47 |
| Msa0534540 | Msa1404000 | 0.832547 | 8.884643e-56 | -8.615850e-47 |
| Msa0534540 | Msa1404020 | 0.802724 | 4.897395e-49 | -8.615850e-47 |
| Msa0534540 | Msa1415310 | 0.832513 | 9.055852e-56 | -8.615850e-47 |
| Msa0534540 | Msa1422180 | 0.817710 | 2.863619e-52 | -8.615850e-47 |
| Msa0534540 | Msa1433120 | 0.841494 | 4.592922e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534540 | MtrunA17_Chr4g0008511 | 48.665 | 487 | 141 | 10 | 8 | 418 | 6 | 459 | 4.21e-134 | 394 |
| Msa0534540 | MtrunA17_Chr4g0008511 | 26.201 | 229 | 134 | 8 | 6 | 216 | 260 | 471 | 1.48e-11 | 66.2 |
| Msa0534540 | MtrunA17_Chr4g0008491 | 58.383 | 334 | 75 | 4 | 87 | 418 | 2 | 273 | 5.40e-110 | 326 |
| Msa0534540 | MtrunA17_Chr4g0007341 | 32.766 | 470 | 218 | 16 | 9 | 415 | 12 | 446 | 5.52e-58 | 196 |
| Msa0534540 | MtrunA17_Chr4g0007631 | 35.616 | 365 | 185 | 12 | 1 | 349 | 1 | 331 | 1.01e-57 | 197 |
| Msa0534540 | MtrunA17_Chr4g0007631 | 27.311 | 238 | 121 | 9 | 10 | 216 | 267 | 483 | 1.99e-13 | 72.0 |
| Msa0534540 | MtrunA17_Chr4g0008481 | 36.000 | 375 | 177 | 11 | 1 | 349 | 1 | 338 | 1.98e-56 | 194 |
| Msa0534540 | MtrunA17_Chr4g0008481 | 30.131 | 229 | 124 | 9 | 10 | 216 | 274 | 488 | 3.50e-18 | 86.7 |
| Msa0534540 | MtrunA17_Chr7g0241261 | 31.486 | 451 | 216 | 12 | 10 | 418 | 9 | 408 | 8.59e-55 | 187 |
| Msa0534540 | MtrunA17_Chr1g0166321 | 30.512 | 449 | 247 | 11 | 10 | 418 | 14 | 437 | 7.66e-52 | 181 |
| Msa0534540 | MtrunA17_Chr7g0239911 | 35.083 | 362 | 182 | 8 | 1 | 352 | 1 | 319 | 1.29e-51 | 179 |
| Msa0534540 | MtrunA17_Chr7g0241251 | 30.649 | 447 | 237 | 10 | 10 | 418 | 12 | 423 | 2.09e-51 | 179 |
| Msa0534540 | MtrunA17_Chr4g0007271 | 35.405 | 370 | 146 | 9 | 1 | 349 | 1 | 298 | 4.27e-51 | 179 |
| Msa0534540 | MtrunA17_Chr4g0007271 | 25.862 | 232 | 136 | 6 | 9 | 216 | 233 | 452 | 1.86e-16 | 81.3 |
| Msa0534540 | MtrunA17_Chr7g0241421 | 35.977 | 353 | 168 | 9 | 13 | 352 | 17 | 324 | 9.50e-51 | 179 |
| Msa0534540 | MtrunA17_Chr7g0237451 | 31.915 | 376 | 165 | 10 | 2 | 352 | 4 | 313 | 2.25e-47 | 169 |
| Msa0534540 | MtrunA17_Chr7g0239731 | 33.512 | 373 | 198 | 8 | 6 | 371 | 5 | 334 | 1.47e-46 | 166 |
| Msa0534540 | MtrunA17_Chr7g0239731 | 24.887 | 221 | 141 | 7 | 4 | 213 | 244 | 450 | 9.00e-11 | 63.5 |
| Msa0534540 | MtrunA17_Chr7g0239901 | 34.463 | 354 | 180 | 8 | 8 | 352 | 36 | 346 | 1.85e-46 | 167 |
| Msa0534540 | MtrunA17_Chr7g0239891 | 31.211 | 487 | 246 | 14 | 2 | 418 | 3 | 470 | 2.96e-46 | 166 |
| Msa0534540 | MtrunA17_Chr7g0238971 | 29.167 | 480 | 229 | 12 | 6 | 418 | 8 | 443 | 1.74e-45 | 163 |
| Msa0534540 | MtrunA17_Chr3g0078631 | 31.613 | 465 | 215 | 12 | 3 | 418 | 15 | 425 | 5.84e-45 | 162 |
| Msa0534540 | MtrunA17_Chr4g0007251 | 31.285 | 358 | 171 | 7 | 9 | 349 | 13 | 312 | 2.40e-43 | 158 |
| Msa0534540 | MtrunA17_Chr4g0007251 | 28.111 | 217 | 118 | 8 | 21 | 216 | 259 | 458 | 1.75e-11 | 65.9 |
| Msa0534540 | MtrunA17_Chr7g0239841 | 33.516 | 364 | 177 | 11 | 1 | 347 | 1 | 316 | 1.03e-42 | 155 |
| Msa0534540 | MtrunA17_Chr7g0239921 | 28.306 | 484 | 233 | 13 | 2 | 418 | 29 | 465 | 7.69e-42 | 154 |
| Msa0534540 | MtrunA17_Chr7g0238961 | 31.635 | 373 | 202 | 8 | 8 | 359 | 263 | 603 | 1.40e-41 | 156 |
| Msa0534540 | MtrunA17_Chr7g0238961 | 41.463 | 123 | 68 | 1 | 1 | 123 | 1 | 119 | 1.23e-22 | 100 |
| Msa0534540 | MtrunA17_Chr7g0241201 | 32.964 | 361 | 195 | 7 | 10 | 357 | 15 | 341 | 5.28e-41 | 149 |
| Msa0534540 | MtrunA17_Chr7g0239851 | 32.240 | 366 | 189 | 11 | 1 | 352 | 1 | 321 | 1.19e-40 | 150 |
| Msa0534540 | MtrunA17_Chr7g0241331 | 31.880 | 367 | 192 | 10 | 10 | 357 | 4 | 331 | 2.14e-40 | 150 |
| Msa0534540 | MtrunA17_Chr7g0239831 | 34.865 | 370 | 164 | 13 | 1 | 347 | 1 | 316 | 7.27e-40 | 148 |
| Msa0534540 | MtrunA17_Chr4g0007231 | 37.768 | 233 | 126 | 10 | 1 | 217 | 1 | 230 | 1.36e-39 | 141 |
| Msa0534540 | MtrunA17_Chr7g0241431 | 30.595 | 353 | 153 | 10 | 16 | 347 | 1 | 282 | 3.02e-38 | 143 |
| Msa0534540 | MtrunA17_Chr7g0241271 | 31.609 | 348 | 189 | 9 | 13 | 347 | 17 | 328 | 8.54e-35 | 131 |
| Msa0534540 | MtrunA17_Chr7g0241161 | 39.548 | 177 | 93 | 5 | 10 | 178 | 15 | 185 | 2.46e-27 | 112 |
| Msa0534540 | MtrunA17_Chr7g0241161 | 33.178 | 214 | 104 | 8 | 240 | 416 | 184 | 395 | 1.18e-20 | 93.6 |
| Msa0534540 | MtrunA17_Chr2g0291981 | 46.087 | 115 | 58 | 2 | 10 | 124 | 14 | 124 | 4.62e-27 | 105 |
| Msa0534540 | MtrunA17_Chr7g0218371 | 42.604 | 169 | 82 | 6 | 10 | 171 | 14 | 174 | 1.96e-26 | 110 |
| Msa0534540 | MtrunA17_Chr7g0218371 | 36.641 | 131 | 66 | 3 | 238 | 357 | 168 | 292 | 1.88e-14 | 74.7 |
| Msa0534540 | MtrunA17_Chr7g0241311 | 31.878 | 229 | 134 | 8 | 1 | 213 | 1 | 223 | 2.81e-26 | 106 |
| Msa0534540 | MtrunA17_Chr7g0241231 | 40.268 | 149 | 74 | 4 | 10 | 149 | 7 | 149 | 1.48e-23 | 96.3 |
| Msa0534540 | MtrunA17_Chr7g0241291 | 27.303 | 304 | 151 | 8 | 159 | 418 | 9 | 286 | 2.61e-23 | 99.8 |
| Msa0534540 | MtrunA17_Chr7g0241361 | 30.147 | 272 | 132 | 7 | 10 | 279 | 16 | 231 | 2.67e-23 | 98.2 |
| Msa0534540 | MtrunA17_Chr7g0241351 | 32.367 | 207 | 128 | 4 | 10 | 212 | 16 | 214 | 5.41e-23 | 96.7 |
| Msa0534540 | MtrunA17_Chr7g0239761 | 29.538 | 325 | 143 | 10 | 1 | 312 | 20 | 271 | 6.24e-23 | 98.2 |
| Msa0534540 | MtrunA17_Chr7g0241511 | 26.791 | 321 | 131 | 8 | 161 | 418 | 17 | 296 | 1.06e-21 | 95.9 |
| Msa0534540 | MtrunA17_Chr7g0239751 | 33.040 | 227 | 111 | 6 | 8 | 218 | 30 | 231 | 1.10e-21 | 93.2 |
| Msa0534540 | MtrunA17_Chr4g0007321 | 28.958 | 259 | 101 | 7 | 236 | 418 | 7 | 258 | 6.95e-19 | 86.7 |
| Msa0534540 | MtrunA17_Chr4g0007321 | 29.870 | 231 | 116 | 9 | 10 | 216 | 61 | 269 | 2.53e-17 | 82.0 |
| Msa0534540 | MtrunA17_Chr7g0239861 | 30.435 | 276 | 135 | 10 | 91 | 358 | 26 | 252 | 2.03e-17 | 83.6 |
| Msa0534540 | MtrunA17_Chr7g0241211 | 32.919 | 161 | 79 | 3 | 286 | 418 | 1 | 160 | 2.74e-17 | 79.7 |
| Msa0534540 | MtrunA17_Chr1g0212741 | 28.384 | 229 | 132 | 8 | 2 | 210 | 3 | 219 | 3.66e-16 | 77.8 |
| Msa0534540 | MtrunA17_Chr7g0237481 | 50.746 | 67 | 33 | 0 | 286 | 352 | 15 | 81 | 2.22e-15 | 73.9 |
| Msa0534540 | MtrunA17_Chr7g0229201 | 29.565 | 230 | 130 | 8 | 1 | 210 | 1 | 218 | 9.18e-15 | 73.6 |
| Msa0534540 | MtrunA17_Chr0c02g0489781 | 29.565 | 230 | 130 | 8 | 1 | 210 | 1 | 218 | 9.18e-15 | 73.6 |
| Msa0534540 | MtrunA17_Chr1g0150211 | 45.946 | 74 | 38 | 1 | 286 | 357 | 1 | 74 | 4.48e-14 | 69.3 |
| Msa0534540 | MtrunA17_Chr8g0355351 | 26.906 | 223 | 132 | 6 | 10 | 216 | 13 | 220 | 5.28e-14 | 71.2 |
| Msa0534540 | MtrunA17_Chr7g0241181 | 43.011 | 93 | 53 | 0 | 288 | 380 | 17 | 109 | 2.73e-13 | 66.6 |
| Msa0534540 | MtrunA17_Chr7g0241301 | 31.034 | 116 | 52 | 2 | 10 | 123 | 12 | 101 | 5.45e-13 | 65.9 |
| Msa0534540 | MtrunA17_Chr1g0212761 | 30.872 | 149 | 79 | 5 | 10 | 151 | 7 | 138 | 6.20e-13 | 65.9 |
| Msa0534540 | MtrunA17_Chr7g0239791 | 34.615 | 130 | 77 | 3 | 224 | 347 | 3 | 130 | 8.00e-12 | 65.5 |
| Msa0534540 | MtrunA17_Chr4g0007221 | 28.261 | 184 | 78 | 4 | 286 | 418 | 10 | 190 | 8.09e-12 | 65.1 |
| Msa0534540 | MtrunA17_Chr7g0263461 | 54.902 | 51 | 23 | 0 | 8 | 58 | 37 | 87 | 9.73e-12 | 60.8 |
| Msa0534540 | MtrunA17_Chr4g0007311 | 31.646 | 158 | 87 | 7 | 93 | 245 | 1 | 142 | 1.43e-11 | 62.0 |
| Msa0534540 | MtrunA17_Chr1g0212771 | 27.551 | 196 | 102 | 6 | 10 | 175 | 9 | 194 | 1.93e-11 | 63.2 |
| Msa0534540 | MtrunA17_Chr7g0229211 | 38.202 | 89 | 45 | 2 | 10 | 97 | 8 | 87 | 3.46e-11 | 63.5 |
| Msa0534540 | MtrunA17_Chr1g0212781 | 35.106 | 94 | 52 | 1 | 10 | 103 | 6 | 90 | 5.01e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534540 | AT3G09110.1 | 34.195 | 348 | 182 | 7 | 10 | 347 | 9 | 319 | 7.19e-50 | 172 |
| Msa0534540 | AT5G01120.1 | 34.384 | 349 | 182 | 6 | 13 | 346 | 12 | 328 | 1.05e-49 | 176 |
| Msa0534540 | AT3G09140.1 | 31.707 | 492 | 246 | 15 | 9 | 418 | 8 | 491 | 1.08e-47 | 171 |
| Msa0534540 | AT3G09140.2 | 30.754 | 491 | 224 | 15 | 9 | 418 | 8 | 463 | 8.42e-46 | 165 |
| Msa0534540 | AT3G09120.1 | 33.140 | 344 | 182 | 6 | 9 | 339 | 5 | 313 | 1.50e-45 | 160 |
| Msa0534540 | AT5G01150.1 | 33.711 | 353 | 187 | 11 | 8 | 347 | 7 | 325 | 1.84e-43 | 159 |
| Msa0534540 | AT5G01130.1 | 31.448 | 442 | 232 | 12 | 8 | 415 | 7 | 411 | 3.37e-40 | 149 |
| Msa0534540 | AT5G01140.1 | 28.387 | 465 | 223 | 11 | 8 | 415 | 7 | 418 | 7.51e-39 | 145 |
| Msa0534540 | AT5G43240.1 | 33.428 | 353 | 187 | 8 | 11 | 347 | 10 | 330 | 3.40e-37 | 142 |
| Msa0534540 | AT5G43240.3 | 33.428 | 353 | 187 | 8 | 11 | 347 | 10 | 330 | 3.40e-37 | 142 |
| Msa0534540 | AT5G43240.4 | 33.428 | 353 | 187 | 8 | 11 | 347 | 10 | 330 | 3.40e-37 | 142 |
| Msa0534540 | AT5G37320.1 | 28.056 | 360 | 186 | 15 | 20 | 347 | 19 | 337 | 3.15e-28 | 116 |
Find 70 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGTGTTTAGTATTTATTC+TGG | 0.088819 | 4_1:-10066912 | Msa0534540:CDS |
| CATGGTGGATTTATTCAAAT+TGG | 0.222313 | 4_1:-10066601 | Msa0534540:intron |
| CAATATACCATTGGATGATT+TGG | 0.281046 | 4_1:-10065012 | Msa0534540:CDS |
| GATTTGTTGTGAGAAATTTA+TGG | 0.293308 | 4_1:-10066886 | Msa0534540:CDS |
| TCCTCTGAGTGATGTATTCT+TGG | 0.319063 | 4_1:-10065477 | Msa0534540:CDS |
| GTGTGTTTAGTATTTATTCT+GGG | 0.332688 | 4_1:-10066911 | Msa0534540:CDS |
| AATCATCCACATTCAACTTC+AGG | 0.334699 | 4_1:+10066976 | None:intergenic |
| AAAGTGCTTCAAAGCTTTCC+TGG | 0.336987 | 4_1:-10066771 | Msa0534540:CDS |
| AAAACTACCATTGACACTTT+TGG | 0.338647 | 4_1:-10067270 | Msa0534540:CDS |
| GTGTGGAAAATTTCAGTGAT+AGG | 0.349892 | 4_1:-10067070 | Msa0534540:CDS |
| TTGTGAGAAATTTATGGTTC+AGG | 0.367812 | 4_1:-10066880 | Msa0534540:CDS |
| CCACATTCAACTTCAGGTTC+TGG | 0.377519 | 4_1:+10066982 | None:intergenic |
| TTCCATTAGGAACCATCATT+AGG | 0.393853 | 4_1:-10067169 | Msa0534540:CDS |
| ATAATAATGTGGAGGTCTTA+AGG | 0.398414 | 4_1:+10065421 | None:intergenic |
| AATGTGCATCATAGAGGTTT+TGG | 0.399001 | 4_1:-10066852 | Msa0534540:CDS |
| TTAAGGAGAAAGGGTACAAT+AGG | 0.401192 | 4_1:+10065438 | None:intergenic |
| ATTTACTTACTGTTACCTTA+AGG | 0.401448 | 4_1:+10065372 | None:intergenic |
| CCAATTGTTTCTTGTTGTGA+TGG | 0.409417 | 4_1:+10067116 | None:intergenic |
| TCAATCCTTCATGTTTCATA+AGG | 0.411494 | 4_1:-10065196 | Msa0534540:CDS |
| ATCCTAATGATGGTTCCTAA+TGG | 0.418326 | 4_1:+10067167 | None:intergenic |
| CTTACAAGTGAAGTACTTTG+TGG | 0.426269 | 4_1:+10066947 | None:intergenic |
| TTTGAGGCAAAATCTCCATA+TGG | 0.437503 | 4_1:-10065152 | Msa0534540:CDS |
| TGTTTCTGTAACCAAGTTGT+TGG | 0.453923 | 4_1:+10066730 | None:intergenic |
| TTGTCTACCAAAAGTGTCAA+TGG | 0.460192 | 4_1:+10067263 | None:intergenic |
| CCATCACAACAAGAAACAAT+TGG | 0.461803 | 4_1:-10067116 | Msa0534540:CDS |
| ACTTCACTTGTAAGATCTGC+GGG | 0.463855 | 4_1:-10066938 | Msa0534540:CDS |
| CAACTTCAGGTTCTGGCAAA+GGG | 0.465388 | 4_1:+10066989 | None:intergenic |
| TGCTCTAGAACTGATCCAAC+AGG | 0.472921 | 4_1:+10065278 | None:intergenic |
| CTTAGACACAATCCTAATGA+TGG | 0.477121 | 4_1:+10067157 | None:intergenic |
| TACTACTATTATGAACCTTA+AGG | 0.477721 | 4_1:-10065387 | Msa0534540:CDS |
| TATACCATTGGATGATTTGG+AGG | 0.480647 | 4_1:-10065009 | Msa0534540:CDS |
| CTTCAGCAACTCCAACAACT+TGG | 0.486952 | 4_1:-10066741 | Msa0534540:CDS |
| TGTGGAGGTCTTAAGGAGAA+AGG | 0.491558 | 4_1:+10065428 | None:intergenic |
| AAGTGCTTCAAAGCTTTCCT+GGG | 0.495084 | 4_1:-10066770 | Msa0534540:CDS |
| TTACAAGTGAAGTACTTTGT+GGG | 0.496614 | 4_1:+10066948 | None:intergenic |
| TCAAAAGCTCAATATACCAT+TGG | 0.497905 | 4_1:-10065021 | Msa0534540:CDS |
| AGTTTCCTCACAACTCCTGT+TGG | 0.502430 | 4_1:-10065293 | Msa0534540:CDS |
| AAAGGCCTTATGAAACATGA+AGG | 0.503766 | 4_1:+10065191 | None:intergenic |
| GTGGAGGTCTTAAGGAGAAA+GGG | 0.503814 | 4_1:+10065429 | None:intergenic |
| TACATCACTCAGAGGAGACT+TGG | 0.505743 | 4_1:+10065484 | None:intergenic |
| GCCATCACAATTTGTTGTGT+GGG | 0.513624 | 4_1:-10065096 | Msa0534540:CDS |
| ATCTTTGAAATATATATGCA+TGG | 0.517526 | 4_1:-10066619 | Msa0534540:CDS |
| TGTGTTTAGTATTTATTCTG+GGG | 0.523933 | 4_1:-10066910 | Msa0534540:CDS |
| TCAACTTCAGGTTCTGGCAA+AGG | 0.534593 | 4_1:+10066988 | None:intergenic |
| ATCACTCAGAGGAGACTTGG+AGG | 0.535183 | 4_1:+10065487 | None:intergenic |
| GGCCATCACAATTTGTTGTG+TGG | 0.538348 | 4_1:-10065097 | Msa0534540:CDS |
| AGTGATGTATTCTTGGCAAA+CGG | 0.542421 | 4_1:-10065470 | Msa0534540:CDS |
| ACTTGTAAGATCTGCGGGGA+GGG | 0.550642 | 4_1:-10066933 | Msa0534540:CDS |
| CTAGAAATCTTATTATCCAA+TGG | 0.572163 | 4_1:+10065056 | None:intergenic |
| TAATCTTCAAGTGACACCAT+TGG | 0.576349 | 4_1:-10065072 | Msa0534540:CDS |
| TCAGTTCTAGAGCAATTGAA+TGG | 0.578611 | 4_1:-10065269 | Msa0534540:CDS |
| AGTTGCTGAAGAGTGTTCCC+AGG | 0.589986 | 4_1:+10066753 | None:intergenic |
| ATAGAAATGCATGTCACTGT+TGG | 0.599207 | 4_1:-10066696 | Msa0534540:CDS |
| TACTTCACTTGTAAGATCTG+CGG | 0.605598 | 4_1:-10066939 | Msa0534540:CDS |
| CAACTCTAGGCATTGTGAAG+AGG | 0.607635 | 4_1:-10065118 | Msa0534540:CDS |
| TCCCACACAACAAATTGTGA+TGG | 0.608209 | 4_1:+10065095 | None:intergenic |
| TGTCACTGTTGGTTTGAAAG+AGG | 0.609598 | 4_1:-10066685 | Msa0534540:CDS |
| TGCTCCTCCAAATCATCCAA+TGG | 0.610653 | 4_1:+10065005 | None:intergenic |
| CCAGAACCTGAAGTTGAATG+TGG | 0.612148 | 4_1:-10066982 | Msa0534540:CDS |
| GCAGTAGCATCATAATAATG+TGG | 0.620233 | 4_1:+10065410 | None:intergenic |
| CACTTGTAAGATCTGCGGGG+AGG | 0.626069 | 4_1:-10066934 | Msa0534540:CDS |
| GTAGAGAATGTGCATCATAG+AGG | 0.634323 | 4_1:-10066858 | Msa0534540:CDS |
| TTGTTTCAGCTAAAACTACA+CGG | 0.647766 | 4_1:+10067231 | None:intergenic |
| GGATGATTTGGAGGAGCATG+TGG | 0.648328 | 4_1:-10065000 | None:intergenic |
| CTGATCCAACAGGAGTTGTG+AGG | 0.651492 | 4_1:+10065288 | None:intergenic |
| TTTGAAATATATATGCATGG+TGG | 0.655547 | 4_1:-10066616 | Msa0534540:CDS |
| GTAGCATCATAATAATGTGG+AGG | 0.668124 | 4_1:+10065413 | None:intergenic |
| AGGGACTCACAATTGTTGTG+TGG | 0.671588 | 4_1:+10067008 | None:intergenic |
| GCCAAGAATACATCACTCAG+AGG | 0.700708 | 4_1:+10065476 | None:intergenic |
| CTTCACTTGTAAGATCTGCG+GGG | 0.756229 | 4_1:-10066937 | Msa0534540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATTGTTATAATTAAATTA+AGG | + | chr4_1:10066701-10066720 | None:intergenic | 10.0% |
| !! | GAATTGTTATAATTAAATTA+AGG | + | chr4_1:10066701-10066720 | None:intergenic | 10.0% |
| !!! | CTGTTTATATTTTTAGATTT+TGG | - | chr4_1:10066766-10066785 | Msa0534540:CDS | 15.0% |
| !!! | CTGTTTATATTTTTAGATTT+TGG | - | chr4_1:10066766-10066785 | Msa0534540:CDS | 15.0% |
| !!! | ATCTTTGAAATATATATGCA+TGG | - | chr4_1:10065678-10065697 | Msa0534540:intron | 20.0% |
| !!! | AAAGAAAACAAGTTTTGAAA+TGG | - | chr4_1:10065728-10065747 | Msa0534540:intron | 20.0% |
| !!! | GAAAAGTATTTGAAACTTTT+AGG | - | chr4_1:10065750-10065769 | Msa0534540:intron | 20.0% |
| !! | AGATATTTCAAAAATCCTTT+AGG | + | chr4_1:10066015-10066034 | None:intergenic | 20.0% |
| !! | CACTTATAAATCGATAAATA+TGG | + | chr4_1:10066231-10066250 | None:intergenic | 20.0% |
| !! | ATTACATCCAATAAAAAAGT+GGG | - | chr4_1:10066390-10066409 | Msa0534540:intron | 20.0% |
| !! | TAATTAAATTAAGGTGCAAA+AGG | + | chr4_1:10066692-10066711 | None:intergenic | 20.0% |
| !!! | AAAAGATTCATGTCTTTTAA+AGG | + | chr4_1:10067127-10067146 | None:intergenic | 20.0% |
| !!! | ATCTTTGAAATATATATGCA+TGG | - | chr4_1:10065678-10065697 | Msa0534540:intron | 20.0% |
| !!! | AAAGAAAACAAGTTTTGAAA+TGG | - | chr4_1:10065728-10065747 | Msa0534540:intron | 20.0% |
| !!! | GAAAAGTATTTGAAACTTTT+AGG | - | chr4_1:10065750-10065769 | Msa0534540:intron | 20.0% |
| !! | AGATATTTCAAAAATCCTTT+AGG | + | chr4_1:10066015-10066034 | None:intergenic | 20.0% |
| !! | CACTTATAAATCGATAAATA+TGG | + | chr4_1:10066231-10066250 | None:intergenic | 20.0% |
| !! | ATTACATCCAATAAAAAAGT+GGG | - | chr4_1:10066390-10066409 | Msa0534540:intron | 20.0% |
| !! | TAATTAAATTAAGGTGCAAA+AGG | + | chr4_1:10066692-10066711 | None:intergenic | 20.0% |
| !!! | AAAAGATTCATGTCTTTTAA+AGG | + | chr4_1:10067127-10067146 | None:intergenic | 20.0% |
| !! | TTTTCTTTCATATTTGTGCA+CGG | + | chr4_1:10065011-10065030 | None:intergenic | 25.0% |
| ! | AAAAAATCTTTACAAGAGTG+TGG | - | chr4_1:10065210-10065229 | Msa0534540:CDS | 25.0% |
| ! | GTGTGTTTAGTATTTATTCT+GGG | - | chr4_1:10065386-10065405 | Msa0534540:CDS | 25.0% |
| ! | TGTGTTTAGTATTTATTCTG+GGG | - | chr4_1:10065387-10065406 | Msa0534540:CDS | 25.0% |
| !!! | GATTTGTTGTGAGAAATTTA+TGG | - | chr4_1:10065411-10065430 | Msa0534540:CDS | 25.0% |
| !! | TTTGAAATATATATGCATGG+TGG | - | chr4_1:10065681-10065700 | Msa0534540:intron | 25.0% |
| ! | TTAAAATACAATCACCATTG+TGG | + | chr4_1:10066095-10066114 | None:intergenic | 25.0% |
| ! | GATTACATCCAATAAAAAAG+TGG | - | chr4_1:10066389-10066408 | Msa0534540:intron | 25.0% |
| !!! | TTTAACACCCACTTTTTTAT+TGG | + | chr4_1:10066400-10066419 | None:intergenic | 25.0% |
| ! | ATATTGCATGTTATATGCAT+GGG | + | chr4_1:10066562-10066581 | None:intergenic | 25.0% |
| ! | TACTACTATTATGAACCTTA+AGG | - | chr4_1:10066910-10066929 | Msa0534540:CDS | 25.0% |
| ! | ATTTACTTACTGTTACCTTA+AGG | + | chr4_1:10066928-10066947 | None:intergenic | 25.0% |
| !!! | TTGAATGGCATTTTTTCTTT+TGG | - | chr4_1:10067043-10067062 | Msa0534540:CDS | 25.0% |
| !! | AAAAGACATGAATCTTTTTG+AGG | - | chr4_1:10067129-10067148 | Msa0534540:CDS | 25.0% |
| !!! | GTTGATTCTATTTTTCCATA+TGG | + | chr4_1:10067163-10067182 | None:intergenic | 25.0% |
| ! | CTAGAAATCTTATTATCCAA+TGG | + | chr4_1:10067244-10067263 | None:intergenic | 25.0% |
| !! | TTTTCTTTCATATTTGTGCA+CGG | + | chr4_1:10065011-10065030 | None:intergenic | 25.0% |
| ! | AAAAAATCTTTACAAGAGTG+TGG | - | chr4_1:10065210-10065229 | Msa0534540:CDS | 25.0% |
| ! | GTGTGTTTAGTATTTATTCT+GGG | - | chr4_1:10065386-10065405 | Msa0534540:CDS | 25.0% |
| ! | TGTGTTTAGTATTTATTCTG+GGG | - | chr4_1:10065387-10065406 | Msa0534540:CDS | 25.0% |
| !!! | GATTTGTTGTGAGAAATTTA+TGG | - | chr4_1:10065411-10065430 | Msa0534540:CDS | 25.0% |
| !! | TTTGAAATATATATGCATGG+TGG | - | chr4_1:10065681-10065700 | Msa0534540:intron | 25.0% |
| ! | TTAAAATACAATCACCATTG+TGG | + | chr4_1:10066095-10066114 | None:intergenic | 25.0% |
| ! | GATTACATCCAATAAAAAAG+TGG | - | chr4_1:10066389-10066408 | Msa0534540:intron | 25.0% |
| !!! | TTTAACACCCACTTTTTTAT+TGG | + | chr4_1:10066400-10066419 | None:intergenic | 25.0% |
| ! | ATATTGCATGTTATATGCAT+GGG | + | chr4_1:10066562-10066581 | None:intergenic | 25.0% |
| ! | TACTACTATTATGAACCTTA+AGG | - | chr4_1:10066910-10066929 | Msa0534540:CDS | 25.0% |
| ! | ATTTACTTACTGTTACCTTA+AGG | + | chr4_1:10066928-10066947 | None:intergenic | 25.0% |
| !!! | TTGAATGGCATTTTTTCTTT+TGG | - | chr4_1:10067043-10067062 | Msa0534540:CDS | 25.0% |
| !! | AAAAGACATGAATCTTTTTG+AGG | - | chr4_1:10067129-10067148 | Msa0534540:CDS | 25.0% |
| !!! | GTTGATTCTATTTTTCCATA+TGG | + | chr4_1:10067163-10067182 | None:intergenic | 25.0% |
| ! | CTAGAAATCTTATTATCCAA+TGG | + | chr4_1:10067244-10067263 | None:intergenic | 25.0% |
| ! | AAAACTACCATTGACACTTT+TGG | - | chr4_1:10065027-10065046 | Msa0534540:CDS | 30.0% |
| TTGTTTCAGCTAAAACTACA+CGG | + | chr4_1:10065069-10065088 | None:intergenic | 30.0% | |
| ! | GACATCGTTGATATTTTGTT+TGG | - | chr4_1:10065094-10065113 | Msa0534540:CDS | 30.0% |
| ! | TTACAAGTGAAGTACTTTGT+GGG | + | chr4_1:10065352-10065371 | None:intergenic | 30.0% |
| GGTGTGTTTAGTATTTATTC+TGG | - | chr4_1:10065385-10065404 | Msa0534540:CDS | 30.0% | |
| TTGTGAGAAATTTATGGTTC+AGG | - | chr4_1:10065417-10065436 | Msa0534540:CDS | 30.0% | |
| !! | CATGGTGGATTTATTCAAAT+TGG | - | chr4_1:10065696-10065715 | Msa0534540:intron | 30.0% |
| ACATTTCTTAATTGCAGTTG+TGG | - | chr4_1:10065781-10065800 | Msa0534540:intron | 30.0% | |
| ! | AGCTTTTATAATACCATTGC+GGG | + | chr4_1:10065834-10065853 | None:intergenic | 30.0% |
| ! | CAGCTTTTATAATACCATTG+CGG | + | chr4_1:10065835-10065854 | None:intergenic | 30.0% |
| AAAAGCTGCGTTAATTGTAT+TGG | - | chr4_1:10065847-10065866 | Msa0534540:intron | 30.0% | |
| AAAAACCATTTATGTTCCAC+CGG | + | chr4_1:10065900-10065919 | None:intergenic | 30.0% | |
| ! | TTTGAAATCTATGCATGCAA+TGG | - | chr4_1:10065917-10065936 | Msa0534540:intron | 30.0% |
| ATGTAGGCAAATACAATTGA+TGG | + | chr4_1:10065962-10065981 | None:intergenic | 30.0% | |
| ! | TCAAAAATCCTTTAGGTTCT+GGG | + | chr4_1:10066008-10066027 | None:intergenic | 30.0% |
| ! | TTCAAAAATCCTTTAGGTTC+TGG | + | chr4_1:10066009-10066028 | None:intergenic | 30.0% |
| TTCCTTCATATTAACCACAA+TGG | - | chr4_1:10066078-10066097 | Msa0534540:intron | 30.0% | |
| !! | CATTACTATTGTTTTGCCTA+TGG | + | chr4_1:10066131-10066150 | None:intergenic | 30.0% |
| !!! | AGAGAATTAGTTTTAGAGAG+TGG | + | chr4_1:10066300-10066319 | None:intergenic | 30.0% |
| AAAGTGGGTGTTAAAAAAAG+AGG | - | chr4_1:10066405-10066424 | Msa0534540:intron | 30.0% | |
| AAGTGGGTGTTAAAAAAAGA+GGG | - | chr4_1:10066406-10066425 | Msa0534540:intron | 30.0% | |
| ! | TAGACAGTCTTATAATACTC+CGG | + | chr4_1:10066447-10066466 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTGTCAAGTAGCC+TGG | - | chr4_1:10066479-10066498 | Msa0534540:intron | 30.0% |
| CTATAGCTCACAATTAAATG+TGG | - | chr4_1:10066505-10066524 | Msa0534540:intron | 30.0% | |
| ACAATTAAATGTGGAGAAGT+GGG | - | chr4_1:10066514-10066533 | Msa0534540:intron | 30.0% | |
| GATATTGCATGTTATATGCA+TGG | + | chr4_1:10066563-10066582 | None:intergenic | 30.0% | |
| TAAATTAAGGTGCAAAAGGA+AGG | + | chr4_1:10066688-10066707 | None:intergenic | 30.0% | |
| ATAATAATGTGGAGGTCTTA+AGG | + | chr4_1:10066879-10066898 | None:intergenic | 30.0% | |
| TCAATCCTTCATGTTTCATA+AGG | - | chr4_1:10067101-10067120 | Msa0534540:CDS | 30.0% | |
| GGAAAAATAGAATCAACTCT+AGG | - | chr4_1:10067166-10067185 | Msa0534540:CDS | 30.0% | |
| TCAAAAGCTCAATATACCAT+TGG | - | chr4_1:10067276-10067295 | Msa0534540:CDS | 30.0% | |
| CAATATACCATTGGATGATT+TGG | - | chr4_1:10067285-10067304 | Msa0534540:CDS | 30.0% | |
| ! | AAAACTACCATTGACACTTT+TGG | - | chr4_1:10065027-10065046 | Msa0534540:CDS | 30.0% |
| TTGTTTCAGCTAAAACTACA+CGG | + | chr4_1:10065069-10065088 | None:intergenic | 30.0% | |
| ! | GACATCGTTGATATTTTGTT+TGG | - | chr4_1:10065094-10065113 | Msa0534540:CDS | 30.0% |
| ! | TTACAAGTGAAGTACTTTGT+GGG | + | chr4_1:10065352-10065371 | None:intergenic | 30.0% |
| GGTGTGTTTAGTATTTATTC+TGG | - | chr4_1:10065385-10065404 | Msa0534540:CDS | 30.0% | |
| TTGTGAGAAATTTATGGTTC+AGG | - | chr4_1:10065417-10065436 | Msa0534540:CDS | 30.0% | |
| !! | CATGGTGGATTTATTCAAAT+TGG | - | chr4_1:10065696-10065715 | Msa0534540:intron | 30.0% |
| ACATTTCTTAATTGCAGTTG+TGG | - | chr4_1:10065781-10065800 | Msa0534540:intron | 30.0% | |
| ! | AGCTTTTATAATACCATTGC+GGG | + | chr4_1:10065834-10065853 | None:intergenic | 30.0% |
| ! | CAGCTTTTATAATACCATTG+CGG | + | chr4_1:10065835-10065854 | None:intergenic | 30.0% |
| AAAAGCTGCGTTAATTGTAT+TGG | - | chr4_1:10065847-10065866 | Msa0534540:intron | 30.0% | |
| AAAAACCATTTATGTTCCAC+CGG | + | chr4_1:10065900-10065919 | None:intergenic | 30.0% | |
| ! | TTTGAAATCTATGCATGCAA+TGG | - | chr4_1:10065917-10065936 | Msa0534540:intron | 30.0% |
| ATGTAGGCAAATACAATTGA+TGG | + | chr4_1:10065962-10065981 | None:intergenic | 30.0% | |
| ! | TCAAAAATCCTTTAGGTTCT+GGG | + | chr4_1:10066008-10066027 | None:intergenic | 30.0% |
| ! | TTCAAAAATCCTTTAGGTTC+TGG | + | chr4_1:10066009-10066028 | None:intergenic | 30.0% |
| TTCCTTCATATTAACCACAA+TGG | - | chr4_1:10066078-10066097 | Msa0534540:intron | 30.0% | |
| !! | CATTACTATTGTTTTGCCTA+TGG | + | chr4_1:10066131-10066150 | None:intergenic | 30.0% |
| !!! | AGAGAATTAGTTTTAGAGAG+TGG | + | chr4_1:10066300-10066319 | None:intergenic | 30.0% |
| AAAGTGGGTGTTAAAAAAAG+AGG | - | chr4_1:10066405-10066424 | Msa0534540:intron | 30.0% | |
| AAGTGGGTGTTAAAAAAAGA+GGG | - | chr4_1:10066406-10066425 | Msa0534540:intron | 30.0% | |
| ! | TAGACAGTCTTATAATACTC+CGG | + | chr4_1:10066447-10066466 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTGTCAAGTAGCC+TGG | - | chr4_1:10066479-10066498 | Msa0534540:intron | 30.0% |
| CTATAGCTCACAATTAAATG+TGG | - | chr4_1:10066505-10066524 | Msa0534540:intron | 30.0% | |
| ACAATTAAATGTGGAGAAGT+GGG | - | chr4_1:10066514-10066533 | Msa0534540:intron | 30.0% | |
| GATATTGCATGTTATATGCA+TGG | + | chr4_1:10066563-10066582 | None:intergenic | 30.0% | |
| TAAATTAAGGTGCAAAAGGA+AGG | + | chr4_1:10066688-10066707 | None:intergenic | 30.0% | |
| ATAATAATGTGGAGGTCTTA+AGG | + | chr4_1:10066879-10066898 | None:intergenic | 30.0% | |
| TCAATCCTTCATGTTTCATA+AGG | - | chr4_1:10067101-10067120 | Msa0534540:CDS | 30.0% | |
| GGAAAAATAGAATCAACTCT+AGG | - | chr4_1:10067166-10067185 | Msa0534540:CDS | 30.0% | |
| TCAAAAGCTCAATATACCAT+TGG | - | chr4_1:10067276-10067295 | Msa0534540:CDS | 30.0% | |
| CAATATACCATTGGATGATT+TGG | - | chr4_1:10067285-10067304 | Msa0534540:CDS | 30.0% | |
| !! | TTGTCTACCAAAAGTGTCAA+TGG | + | chr4_1:10065037-10065056 | None:intergenic | 35.0% |
| !!! | GTAGTTTTAGCTGAAACAAG+TGG | - | chr4_1:10065070-10065089 | Msa0534540:CDS | 35.0% |
| TTCCATTAGGAACCATCATT+AGG | - | chr4_1:10065128-10065147 | Msa0534540:CDS | 35.0% | |
| ATCCTAATGATGGTTCCTAA+TGG | + | chr4_1:10065133-10065152 | None:intergenic | 35.0% | |
| CTTAGACACAATCCTAATGA+TGG | + | chr4_1:10065143-10065162 | None:intergenic | 35.0% | |
| ! | CCAATTGTTTCTTGTTGTGA+TGG | + | chr4_1:10065184-10065203 | None:intergenic | 35.0% |
| CCATCACAACAAGAAACAAT+TGG | - | chr4_1:10065181-10065200 | Msa0534540:CDS | 35.0% | |
| GTGTGGAAAATTTCAGTGAT+AGG | - | chr4_1:10065227-10065246 | Msa0534540:CDS | 35.0% | |
| ! | TTTTCGTCATAGTGAATGCA+AGG | - | chr4_1:10065252-10065271 | Msa0534540:CDS | 35.0% |
| AATCATCCACATTCAACTTC+AGG | + | chr4_1:10065324-10065343 | None:intergenic | 35.0% | |
| ! | CTTACAAGTGAAGTACTTTG+TGG | + | chr4_1:10065353-10065372 | None:intergenic | 35.0% |
| TACTTCACTTGTAAGATCTG+CGG | - | chr4_1:10065358-10065377 | Msa0534540:CDS | 35.0% | |
| ! | AATGTGCATCATAGAGGTTT+TGG | - | chr4_1:10065445-10065464 | Msa0534540:CDS | 35.0% |
| !!! | TGAAGCTGGTTTTGTTAAGA+AGG | - | chr4_1:10065474-10065493 | Msa0534540:CDS | 35.0% |
| !!! | GAAGCTGGTTTTGTTAAGAA+GGG | - | chr4_1:10065475-10065494 | Msa0534540:CDS | 35.0% |
| ! | TGTTTCTGTAACCAAGTTGT+TGG | + | chr4_1:10065570-10065589 | None:intergenic | 35.0% |
| ATAGAAATGCATGTCACTGT+TGG | - | chr4_1:10065601-10065620 | Msa0534540:intron | 35.0% | |
| ! | GCTTTTATAATACCATTGCG+GGG | + | chr4_1:10065833-10065852 | None:intergenic | 35.0% |
| !!! | TGTATTGGCTTGCATTTTGA+CGG | - | chr4_1:10065862-10065881 | Msa0534540:intron | 35.0% |
| TGACATTACAATCGCAATTG+CGG | - | chr4_1:10066039-10066058 | Msa0534540:intron | 35.0% | |
| CACCATTGTGGTTAATATGA+AGG | + | chr4_1:10066083-10066102 | None:intergenic | 35.0% | |
| TGTGCAAGAGAAATGTAACT+TGG | - | chr4_1:10066158-10066177 | Msa0534540:intron | 35.0% | |
| CAGTACAAGAGTCAATGAAA+CGG | - | chr4_1:10066273-10066292 | Msa0534540:intron | 35.0% | |
| AGGGTTCTTATTATTGTGAC+CGG | - | chr4_1:10066425-10066444 | Msa0534540:intron | 35.0% | |
| CACAATTAAATGTGGAGAAG+TGG | - | chr4_1:10066513-10066532 | Msa0534540:intron | 35.0% | |
| CAATTAAATGTGGAGAAGTG+GGG | - | chr4_1:10066515-10066534 | Msa0534540:intron | 35.0% | |
| TACAAACTGAGTTAAGCTCA+TGG | - | chr4_1:10066585-10066604 | Msa0534540:intron | 35.0% | |
| ACAAACTGAGTTAAGCTCAT+GGG | - | chr4_1:10066586-10066605 | Msa0534540:intron | 35.0% | |
| AGTGATGTATTCTTGGCAAA+CGG | - | chr4_1:10066827-10066846 | Msa0534540:CDS | 35.0% | |
| ! | TTAAGGAGAAAGGGTACAAT+AGG | + | chr4_1:10066862-10066881 | None:intergenic | 35.0% |
| GTAGCATCATAATAATGTGG+AGG | + | chr4_1:10066887-10066906 | None:intergenic | 35.0% | |
| GCAGTAGCATCATAATAATG+TGG | + | chr4_1:10066890-10066909 | None:intergenic | 35.0% | |
| !! | TCAGTTCTAGAGCAATTGAA+TGG | - | chr4_1:10067028-10067047 | Msa0534540:CDS | 35.0% |
| ! | AAAGGCCTTATGAAACATGA+AGG | + | chr4_1:10067109-10067128 | None:intergenic | 35.0% |
| ! | TTTGAGGCAAAATCTCCATA+TGG | - | chr4_1:10067145-10067164 | Msa0534540:CDS | 35.0% |
| TAATCTTCAAGTGACACCAT+TGG | - | chr4_1:10067225-10067244 | Msa0534540:CDS | 35.0% | |
| ! | TATACCATTGGATGATTTGG+AGG | - | chr4_1:10067288-10067307 | Msa0534540:CDS | 35.0% |
| !! | TTGTCTACCAAAAGTGTCAA+TGG | + | chr4_1:10065037-10065056 | None:intergenic | 35.0% |
| !!! | GTAGTTTTAGCTGAAACAAG+TGG | - | chr4_1:10065070-10065089 | Msa0534540:CDS | 35.0% |
| TTCCATTAGGAACCATCATT+AGG | - | chr4_1:10065128-10065147 | Msa0534540:CDS | 35.0% | |
| ATCCTAATGATGGTTCCTAA+TGG | + | chr4_1:10065133-10065152 | None:intergenic | 35.0% | |
| CTTAGACACAATCCTAATGA+TGG | + | chr4_1:10065143-10065162 | None:intergenic | 35.0% | |
| ! | CCAATTGTTTCTTGTTGTGA+TGG | + | chr4_1:10065184-10065203 | None:intergenic | 35.0% |
| CCATCACAACAAGAAACAAT+TGG | - | chr4_1:10065181-10065200 | Msa0534540:CDS | 35.0% | |
| GTGTGGAAAATTTCAGTGAT+AGG | - | chr4_1:10065227-10065246 | Msa0534540:CDS | 35.0% | |
| ! | TTTTCGTCATAGTGAATGCA+AGG | - | chr4_1:10065252-10065271 | Msa0534540:CDS | 35.0% |
| AATCATCCACATTCAACTTC+AGG | + | chr4_1:10065324-10065343 | None:intergenic | 35.0% | |
| ! | CTTACAAGTGAAGTACTTTG+TGG | + | chr4_1:10065353-10065372 | None:intergenic | 35.0% |
| TACTTCACTTGTAAGATCTG+CGG | - | chr4_1:10065358-10065377 | Msa0534540:CDS | 35.0% | |
| ! | AATGTGCATCATAGAGGTTT+TGG | - | chr4_1:10065445-10065464 | Msa0534540:CDS | 35.0% |
| !!! | TGAAGCTGGTTTTGTTAAGA+AGG | - | chr4_1:10065474-10065493 | Msa0534540:CDS | 35.0% |
| !!! | GAAGCTGGTTTTGTTAAGAA+GGG | - | chr4_1:10065475-10065494 | Msa0534540:CDS | 35.0% |
| ! | TGTTTCTGTAACCAAGTTGT+TGG | + | chr4_1:10065570-10065589 | None:intergenic | 35.0% |
| ATAGAAATGCATGTCACTGT+TGG | - | chr4_1:10065601-10065620 | Msa0534540:intron | 35.0% | |
| ! | GCTTTTATAATACCATTGCG+GGG | + | chr4_1:10065833-10065852 | None:intergenic | 35.0% |
| !!! | TGTATTGGCTTGCATTTTGA+CGG | - | chr4_1:10065862-10065881 | Msa0534540:intron | 35.0% |
| TGACATTACAATCGCAATTG+CGG | - | chr4_1:10066039-10066058 | Msa0534540:intron | 35.0% | |
| CACCATTGTGGTTAATATGA+AGG | + | chr4_1:10066083-10066102 | None:intergenic | 35.0% | |
| TGTGCAAGAGAAATGTAACT+TGG | - | chr4_1:10066158-10066177 | Msa0534540:intron | 35.0% | |
| CAGTACAAGAGTCAATGAAA+CGG | - | chr4_1:10066273-10066292 | Msa0534540:intron | 35.0% | |
| AGGGTTCTTATTATTGTGAC+CGG | - | chr4_1:10066425-10066444 | Msa0534540:intron | 35.0% | |
| CACAATTAAATGTGGAGAAG+TGG | - | chr4_1:10066513-10066532 | Msa0534540:intron | 35.0% | |
| CAATTAAATGTGGAGAAGTG+GGG | - | chr4_1:10066515-10066534 | Msa0534540:intron | 35.0% | |
| TACAAACTGAGTTAAGCTCA+TGG | - | chr4_1:10066585-10066604 | Msa0534540:intron | 35.0% | |
| ACAAACTGAGTTAAGCTCAT+GGG | - | chr4_1:10066586-10066605 | Msa0534540:intron | 35.0% | |
| AGTGATGTATTCTTGGCAAA+CGG | - | chr4_1:10066827-10066846 | Msa0534540:CDS | 35.0% | |
| ! | TTAAGGAGAAAGGGTACAAT+AGG | + | chr4_1:10066862-10066881 | None:intergenic | 35.0% |
| GTAGCATCATAATAATGTGG+AGG | + | chr4_1:10066887-10066906 | None:intergenic | 35.0% | |
| GCAGTAGCATCATAATAATG+TGG | + | chr4_1:10066890-10066909 | None:intergenic | 35.0% | |
| !! | TCAGTTCTAGAGCAATTGAA+TGG | - | chr4_1:10067028-10067047 | Msa0534540:CDS | 35.0% |
| ! | AAAGGCCTTATGAAACATGA+AGG | + | chr4_1:10067109-10067128 | None:intergenic | 35.0% |
| ! | TTTGAGGCAAAATCTCCATA+TGG | - | chr4_1:10067145-10067164 | Msa0534540:CDS | 35.0% |
| TAATCTTCAAGTGACACCAT+TGG | - | chr4_1:10067225-10067244 | Msa0534540:CDS | 35.0% | |
| ! | TATACCATTGGATGATTTGG+AGG | - | chr4_1:10067288-10067307 | Msa0534540:CDS | 35.0% |
| ! | GGTTTTCTCACACTTCCATT+AGG | - | chr4_1:10065115-10065134 | Msa0534540:CDS | 40.0% |
| ACTTCACTTGTAAGATCTGC+GGG | - | chr4_1:10065359-10065378 | Msa0534540:CDS | 40.0% | |
| GTAGAGAATGTGCATCATAG+AGG | - | chr4_1:10065439-10065458 | Msa0534540:CDS | 40.0% | |
| ! | AAAGTGCTTCAAAGCTTTCC+TGG | - | chr4_1:10065526-10065545 | Msa0534540:intron | 40.0% |
| AAGTGCTTCAAAGCTTTCCT+GGG | - | chr4_1:10065527-10065546 | Msa0534540:intron | 40.0% | |
| !! | TGTCACTGTTGGTTTGAAAG+AGG | - | chr4_1:10065612-10065631 | Msa0534540:intron | 40.0% |
| !! | TGCAAAAACCCTTTAGGTTG+CGG | + | chr4_1:10065808-10065827 | None:intergenic | 40.0% |
| AATTGCCGGTGGAACATAAA+TGG | - | chr4_1:10065892-10065911 | Msa0534540:intron | 40.0% | |
| CAATGGCATTGCAACAATTG+CGG | - | chr4_1:10065934-10065953 | Msa0534540:intron | 40.0% | |
| AATTGTGTCCCAGAACCTAA+AGG | - | chr4_1:10065997-10066016 | Msa0534540:intron | 40.0% | |
| GACATTACAATCGCAATTGC+GGG | - | chr4_1:10066040-10066059 | Msa0534540:intron | 40.0% | |
| TAATCGCAACATGAGACCAT+AGG | - | chr4_1:10066112-10066131 | Msa0534540:intron | 40.0% | |
| TATGGATGCAGTTGTAGACT+TGG | + | chr4_1:10066213-10066232 | None:intergenic | 40.0% | |
| ! | TTAACCTAGCTCTCACACTT+TGG | - | chr4_1:10066332-10066351 | Msa0534540:intron | 40.0% |
| ATTTCCAAAGTGTGAGAGCT+AGG | + | chr4_1:10066339-10066358 | None:intergenic | 40.0% | |
| ! | TAGCTCTCACACTTTGGAAA+TGG | - | chr4_1:10066338-10066357 | Msa0534540:intron | 40.0% |
| AATTGTGAGCTATAGCAACC+AGG | + | chr4_1:10066500-10066519 | None:intergenic | 40.0% | |
| TGCATGTTATATGCATGGGT+CGG | + | chr4_1:10066558-10066577 | None:intergenic | 40.0% | |
| CAAACTGAGTTAAGCTCATG+GGG | - | chr4_1:10066587-10066606 | Msa0534540:intron | 40.0% | |
| TCCTCTGAGTGATGTATTCT+TGG | - | chr4_1:10066820-10066839 | Msa0534540:CDS | 40.0% | |
| !! | GCCATCACAATTTGTTGTGT+GGG | - | chr4_1:10067201-10067220 | Msa0534540:CDS | 40.0% |
| TCCCACACAACAAATTGTGA+TGG | + | chr4_1:10067205-10067224 | None:intergenic | 40.0% | |
| ! | GGTTTTCTCACACTTCCATT+AGG | - | chr4_1:10065115-10065134 | Msa0534540:CDS | 40.0% |
| ACTTCACTTGTAAGATCTGC+GGG | - | chr4_1:10065359-10065378 | Msa0534540:CDS | 40.0% | |
| GTAGAGAATGTGCATCATAG+AGG | - | chr4_1:10065439-10065458 | Msa0534540:CDS | 40.0% | |
| ! | AAAGTGCTTCAAAGCTTTCC+TGG | - | chr4_1:10065526-10065545 | Msa0534540:intron | 40.0% |
| AAGTGCTTCAAAGCTTTCCT+GGG | - | chr4_1:10065527-10065546 | Msa0534540:intron | 40.0% | |
| !! | TGTCACTGTTGGTTTGAAAG+AGG | - | chr4_1:10065612-10065631 | Msa0534540:intron | 40.0% |
| !! | TGCAAAAACCCTTTAGGTTG+CGG | + | chr4_1:10065808-10065827 | None:intergenic | 40.0% |
| AATTGCCGGTGGAACATAAA+TGG | - | chr4_1:10065892-10065911 | Msa0534540:intron | 40.0% | |
| CAATGGCATTGCAACAATTG+CGG | - | chr4_1:10065934-10065953 | Msa0534540:intron | 40.0% | |
| AATTGTGTCCCAGAACCTAA+AGG | - | chr4_1:10065997-10066016 | Msa0534540:intron | 40.0% | |
| GACATTACAATCGCAATTGC+GGG | - | chr4_1:10066040-10066059 | Msa0534540:intron | 40.0% | |
| TAATCGCAACATGAGACCAT+AGG | - | chr4_1:10066112-10066131 | Msa0534540:intron | 40.0% | |
| TATGGATGCAGTTGTAGACT+TGG | + | chr4_1:10066213-10066232 | None:intergenic | 40.0% | |
| ! | TTAACCTAGCTCTCACACTT+TGG | - | chr4_1:10066332-10066351 | Msa0534540:intron | 40.0% |
| ATTTCCAAAGTGTGAGAGCT+AGG | + | chr4_1:10066339-10066358 | None:intergenic | 40.0% | |
| ! | TAGCTCTCACACTTTGGAAA+TGG | - | chr4_1:10066338-10066357 | Msa0534540:intron | 40.0% |
| AATTGTGAGCTATAGCAACC+AGG | + | chr4_1:10066500-10066519 | None:intergenic | 40.0% | |
| TGCATGTTATATGCATGGGT+CGG | + | chr4_1:10066558-10066577 | None:intergenic | 40.0% | |
| CAAACTGAGTTAAGCTCATG+GGG | - | chr4_1:10066587-10066606 | Msa0534540:intron | 40.0% | |
| TCCTCTGAGTGATGTATTCT+TGG | - | chr4_1:10066820-10066839 | Msa0534540:CDS | 40.0% | |
| !! | GCCATCACAATTTGTTGTGT+GGG | - | chr4_1:10067201-10067220 | Msa0534540:CDS | 40.0% |
| TCCCACACAACAAATTGTGA+TGG | + | chr4_1:10067205-10067224 | None:intergenic | 40.0% | |
| AGGGACTCACAATTGTTGTG+TGG | + | chr4_1:10065292-10065311 | None:intergenic | 45.0% | |
| ! | CAACTTCAGGTTCTGGCAAA+GGG | + | chr4_1:10065311-10065330 | None:intergenic | 45.0% |
| ! | TCAACTTCAGGTTCTGGCAA+AGG | + | chr4_1:10065312-10065331 | None:intergenic | 45.0% |
| ! | CCACATTCAACTTCAGGTTC+TGG | + | chr4_1:10065318-10065337 | None:intergenic | 45.0% |
| CCAGAACCTGAAGTTGAATG+TGG | - | chr4_1:10065315-10065334 | Msa0534540:CDS | 45.0% | |
| CTTCACTTGTAAGATCTGCG+GGG | - | chr4_1:10065360-10065379 | Msa0534540:CDS | 45.0% | |
| !! | GTGCATCATAGAGGTTTTGG+TGG | - | chr4_1:10065448-10065467 | Msa0534540:CDS | 45.0% |
| !! | GGTTTTGGTGGAAATGAAGC+TGG | - | chr4_1:10065460-10065479 | Msa0534540:CDS | 45.0% |
| CTTCAGCAACTCCAACAACT+TGG | - | chr4_1:10065556-10065575 | Msa0534540:intron | 45.0% | |
| GGGGATTGCAAAAACCCTTT+AGG | + | chr4_1:10065814-10065833 | None:intergenic | 45.0% | |
| TGCGGTTGCGATCAAAATGT+AGG | + | chr4_1:10065978-10065997 | None:intergenic | 45.0% | |
| !! | TAGGTTCTGGGACACAATTG+CGG | + | chr4_1:10065996-10066015 | None:intergenic | 45.0% |
| GGAAATGGATCCCACAAAAG+TGG | - | chr4_1:10066353-10066372 | Msa0534540:intron | 45.0% | |
| AATGGATCCCACAAAAGTGG+TGG | - | chr4_1:10066356-10066375 | Msa0534540:intron | 45.0% | |
| ATGGATCCCACAAAAGTGGT+GGG | - | chr4_1:10066357-10066376 | Msa0534540:intron | 45.0% | |
| !! | ATATGCCCCACCACTTTTGT+GGG | + | chr4_1:10066366-10066385 | None:intergenic | 45.0% |
| !! | TATATGCCCCACCACTTTTG+TGG | + | chr4_1:10066367-10066386 | None:intergenic | 45.0% |
| CATGTTATATGCATGGGTCG+GGG | + | chr4_1:10066556-10066575 | None:intergenic | 45.0% | |
| GCATGTTATATGCATGGGTC+GGG | + | chr4_1:10066557-10066576 | None:intergenic | 45.0% | |
| TACATCACTCAGAGGAGACT+TGG | + | chr4_1:10066816-10066835 | None:intergenic | 45.0% | |
| GCCAAGAATACATCACTCAG+AGG | + | chr4_1:10066824-10066843 | None:intergenic | 45.0% | |
| GTGGAGGTCTTAAGGAGAAA+GGG | + | chr4_1:10066871-10066890 | None:intergenic | 45.0% | |
| TGTGGAGGTCTTAAGGAGAA+AGG | + | chr4_1:10066872-10066891 | None:intergenic | 45.0% | |
| AGTTTCCTCACAACTCCTGT+TGG | - | chr4_1:10067004-10067023 | Msa0534540:CDS | 45.0% | |
| !! | TGCTCTAGAACTGATCCAAC+AGG | + | chr4_1:10067022-10067041 | None:intergenic | 45.0% |
| ! | CAACTCTAGGCATTGTGAAG+AGG | - | chr4_1:10067179-10067198 | Msa0534540:CDS | 45.0% |
| !! | GGCCATCACAATTTGTTGTG+TGG | - | chr4_1:10067200-10067219 | Msa0534540:CDS | 45.0% |
| TGCTCCTCCAAATCATCCAA+TGG | + | chr4_1:10067295-10067314 | None:intergenic | 45.0% | |
| AGGGACTCACAATTGTTGTG+TGG | + | chr4_1:10065292-10065311 | None:intergenic | 45.0% | |
| ! | CAACTTCAGGTTCTGGCAAA+GGG | + | chr4_1:10065311-10065330 | None:intergenic | 45.0% |
| ! | TCAACTTCAGGTTCTGGCAA+AGG | + | chr4_1:10065312-10065331 | None:intergenic | 45.0% |
| ! | CCACATTCAACTTCAGGTTC+TGG | + | chr4_1:10065318-10065337 | None:intergenic | 45.0% |
| CCAGAACCTGAAGTTGAATG+TGG | - | chr4_1:10065315-10065334 | Msa0534540:CDS | 45.0% | |
| CTTCACTTGTAAGATCTGCG+GGG | - | chr4_1:10065360-10065379 | Msa0534540:CDS | 45.0% | |
| !! | GTGCATCATAGAGGTTTTGG+TGG | - | chr4_1:10065448-10065467 | Msa0534540:CDS | 45.0% |
| !! | GGTTTTGGTGGAAATGAAGC+TGG | - | chr4_1:10065460-10065479 | Msa0534540:CDS | 45.0% |
| CTTCAGCAACTCCAACAACT+TGG | - | chr4_1:10065556-10065575 | Msa0534540:intron | 45.0% | |
| GGGGATTGCAAAAACCCTTT+AGG | + | chr4_1:10065814-10065833 | None:intergenic | 45.0% | |
| TGCGGTTGCGATCAAAATGT+AGG | + | chr4_1:10065978-10065997 | None:intergenic | 45.0% | |
| !! | TAGGTTCTGGGACACAATTG+CGG | + | chr4_1:10065996-10066015 | None:intergenic | 45.0% |
| GGAAATGGATCCCACAAAAG+TGG | - | chr4_1:10066353-10066372 | Msa0534540:intron | 45.0% | |
| AATGGATCCCACAAAAGTGG+TGG | - | chr4_1:10066356-10066375 | Msa0534540:intron | 45.0% | |
| ATGGATCCCACAAAAGTGGT+GGG | - | chr4_1:10066357-10066376 | Msa0534540:intron | 45.0% | |
| !! | ATATGCCCCACCACTTTTGT+GGG | + | chr4_1:10066366-10066385 | None:intergenic | 45.0% |
| !! | TATATGCCCCACCACTTTTG+TGG | + | chr4_1:10066367-10066386 | None:intergenic | 45.0% |
| CATGTTATATGCATGGGTCG+GGG | + | chr4_1:10066556-10066575 | None:intergenic | 45.0% | |
| GCATGTTATATGCATGGGTC+GGG | + | chr4_1:10066557-10066576 | None:intergenic | 45.0% | |
| TACATCACTCAGAGGAGACT+TGG | + | chr4_1:10066816-10066835 | None:intergenic | 45.0% | |
| GCCAAGAATACATCACTCAG+AGG | + | chr4_1:10066824-10066843 | None:intergenic | 45.0% | |
| GTGGAGGTCTTAAGGAGAAA+GGG | + | chr4_1:10066871-10066890 | None:intergenic | 45.0% | |
| TGTGGAGGTCTTAAGGAGAA+AGG | + | chr4_1:10066872-10066891 | None:intergenic | 45.0% | |
| AGTTTCCTCACAACTCCTGT+TGG | - | chr4_1:10067004-10067023 | Msa0534540:CDS | 45.0% | |
| !! | TGCTCTAGAACTGATCCAAC+AGG | + | chr4_1:10067022-10067041 | None:intergenic | 45.0% |
| ! | CAACTCTAGGCATTGTGAAG+AGG | - | chr4_1:10067179-10067198 | Msa0534540:CDS | 45.0% |
| !! | GGCCATCACAATTTGTTGTG+TGG | - | chr4_1:10067200-10067219 | Msa0534540:CDS | 45.0% |
| TGCTCCTCCAAATCATCCAA+TGG | + | chr4_1:10067295-10067314 | None:intergenic | 45.0% | |
| !!! | TAATTTTAATTAATTTTACT+TGG | - | chr4_1:10065647-10065666 | Msa0534540:intron | 5.0% |
| !!! | TAATTTTAATTAATTTTACT+TGG | - | chr4_1:10065647-10065666 | Msa0534540:intron | 5.0% |
| ACTTGTAAGATCTGCGGGGA+GGG | - | chr4_1:10065364-10065383 | Msa0534540:CDS | 50.0% | |
| !! | AGTTGCTGAAGAGTGTTCCC+AGG | + | chr4_1:10065547-10065566 | None:intergenic | 50.0% |
| AGTTGTGGACCGCAACCTAA+AGG | - | chr4_1:10065796-10065815 | Msa0534540:intron | 50.0% | |
| GTTGTGGACCGCAACCTAAA+GGG | - | chr4_1:10065797-10065816 | Msa0534540:intron | 50.0% | |
| ! | GGTTTTTGCAATCCCCGCAA+TGG | - | chr4_1:10065818-10065837 | Msa0534540:intron | 50.0% |
| TTGACGGCAACTGCAATTGC+CGG | - | chr4_1:10065878-10065897 | Msa0534540:intron | 50.0% | |
| TGGATCCCACAAAAGTGGTG+GGG | - | chr4_1:10066358-10066377 | Msa0534540:intron | 50.0% | |
| ATCACTCAGAGGAGACTTGG+AGG | + | chr4_1:10066813-10066832 | None:intergenic | 50.0% | |
| CTGATCCAACAGGAGTTGTG+AGG | + | chr4_1:10067012-10067031 | None:intergenic | 50.0% | |
| ACTTGTAAGATCTGCGGGGA+GGG | - | chr4_1:10065364-10065383 | Msa0534540:CDS | 50.0% | |
| !! | AGTTGCTGAAGAGTGTTCCC+AGG | + | chr4_1:10065547-10065566 | None:intergenic | 50.0% |
| AGTTGTGGACCGCAACCTAA+AGG | - | chr4_1:10065796-10065815 | Msa0534540:intron | 50.0% | |
| GTTGTGGACCGCAACCTAAA+GGG | - | chr4_1:10065797-10065816 | Msa0534540:intron | 50.0% | |
| ! | GGTTTTTGCAATCCCCGCAA+TGG | - | chr4_1:10065818-10065837 | Msa0534540:intron | 50.0% |
| TTGACGGCAACTGCAATTGC+CGG | - | chr4_1:10065878-10065897 | Msa0534540:intron | 50.0% | |
| TGGATCCCACAAAAGTGGTG+GGG | - | chr4_1:10066358-10066377 | Msa0534540:intron | 50.0% | |
| ATCACTCAGAGGAGACTTGG+AGG | + | chr4_1:10066813-10066832 | None:intergenic | 50.0% | |
| CTGATCCAACAGGAGTTGTG+AGG | + | chr4_1:10067012-10067031 | None:intergenic | 50.0% | |
| CACTTGTAAGATCTGCGGGG+AGG | - | chr4_1:10065363-10065382 | Msa0534540:CDS | 55.0% | |
| ! | ATGTGGAGAAGTGGGGTGTC+CGG | - | chr4_1:10066522-10066541 | Msa0534540:intron | 55.0% |
| CACTTGTAAGATCTGCGGGG+AGG | - | chr4_1:10065363-10065382 | Msa0534540:CDS | 55.0% | |
| ! | ATGTGGAGAAGTGGGGTGTC+CGG | - | chr4_1:10066522-10066541 | Msa0534540:intron | 55.0% |
| ACGGCAACTGCAATTGCCGG+TGG | - | chr4_1:10065881-10065900 | Msa0534540:intron | 60.0% | |
| ! | TGTGGAGAAGTGGGGTGTCC+GGG | - | chr4_1:10066523-10066542 | Msa0534540:intron | 60.0% |
| ATGGGTCGGGGTTCAAACCC+CGG | + | chr4_1:10066544-10066563 | None:intergenic | 60.0% | |
| ACGGCAACTGCAATTGCCGG+TGG | - | chr4_1:10065881-10065900 | Msa0534540:intron | 60.0% | |
| ! | TGTGGAGAAGTGGGGTGTCC+GGG | - | chr4_1:10066523-10066542 | Msa0534540:intron | 60.0% |
| ATGGGTCGGGGTTCAAACCC+CGG | + | chr4_1:10066544-10066563 | None:intergenic | 60.0% | |
| ! | GTGGAGAAGTGGGGTGTCCG+GGG | - | chr4_1:10066524-10066543 | Msa0534540:intron | 65.0% |
| ! | GTGGAGAAGTGGGGTGTCCG+GGG | - | chr4_1:10066524-10066543 | Msa0534540:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 10065001 | 10067318 | 10065001 | ID=Msa0534540;Name=Msa0534540 |
| chr4_1 | mRNA | 10065001 | 10067318 | 10065001 | ID=Msa0534540-mRNA-1;Parent=Msa0534540;Name=Msa0534540-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|0|0.5|2|0|418 |
| chr4_1 | exon | 10066602 | 10067318 | 10066602 | ID=Msa0534540-mRNA-1:exon:3244;Parent=Msa0534540-mRNA-1 |
| chr4_1 | exon | 10065001 | 10065537 | 10065001 | ID=Msa0534540-mRNA-1:exon:3243;Parent=Msa0534540-mRNA-1 |
| chr4_1 | CDS | 10066602 | 10067318 | 10066602 | ID=Msa0534540-mRNA-1:cds;Parent=Msa0534540-mRNA-1 |
| chr4_1 | CDS | 10065001 | 10065537 | 10065001 | ID=Msa0534540-mRNA-1:cds;Parent=Msa0534540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
