Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287800 | RHN72570.1 | 90.323 | 155 | 15 | 0 | 2 | 156 | 640 | 794 | 2.82e-92 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287800 | sp|Q9SSE9|JMJ25_ARATH | 66.942 | 121 | 40 | 0 | 36 | 156 | 746 | 866 | 1.12e-51 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287800 | A0A396J3U9 | 90.323 | 155 | 15 | 0 | 2 | 156 | 640 | 794 | 1.34e-92 | 295 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1287800 | TR | Jumonji |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa1287800 | 0.830872 | 2.299690e-55 | -8.615850e-47 |
| Msa0013750 | Msa1287800 | 0.856401 | 3.299133e-62 | -8.615850e-47 |
| Msa0014330 | Msa1287800 | 0.807788 | 4.260427e-50 | -8.615850e-47 |
| Msa0015750 | Msa1287800 | 0.873275 | 1.667881e-67 | -8.615850e-47 |
| Msa0016570 | Msa1287800 | 0.876592 | 1.235164e-68 | -8.615850e-47 |
| Msa0016580 | Msa1287800 | 0.859618 | 3.652809e-63 | -8.615850e-47 |
| Msa0028380 | Msa1287800 | 0.813806 | 2.124361e-51 | -8.615850e-47 |
| Msa0028480 | Msa1287800 | 0.805770 | 1.137204e-49 | -8.615850e-47 |
| Msa0092630 | Msa1287800 | 0.840637 | 7.712823e-58 | -8.615850e-47 |
| Msa0093170 | Msa1287800 | 0.802217 | 6.230416e-49 | -8.615850e-47 |
| Msa0102070 | Msa1287800 | 0.923092 | 4.187190e-89 | -8.615850e-47 |
| Msa0107580 | Msa1287800 | 0.803817 | 2.908972e-49 | -8.615850e-47 |
| Msa0110270 | Msa1287800 | 0.848088 | 7.657456e-60 | -8.615850e-47 |
| Msa0111510 | Msa1287800 | 0.845199 | 4.712068e-59 | -8.615850e-47 |
| Msa0604350 | Msa1287800 | 0.842601 | 2.340786e-58 | -8.615850e-47 |
| Msa0636170 | Msa1287800 | 0.865931 | 4.128593e-65 | -8.615850e-47 |
| Msa0639610 | Msa1287800 | 0.851932 | 6.428456e-61 | -8.615850e-47 |
| Msa0668260 | Msa1287800 | 0.811736 | 6.031397e-51 | -8.615850e-47 |
| Msa0678930 | Msa1287800 | 0.862587 | 4.561048e-64 | -8.615850e-47 |
| Msa0694370 | Msa1287800 | 0.839961 | 1.158482e-57 | -8.615850e-47 |
| Msa0725850 | Msa1287800 | 0.827786 | 1.290363e-54 | -8.615850e-47 |
| Msa0726140 | Msa1287800 | 0.914670 | 1.459184e-84 | -8.615850e-47 |
| Msa0729800 | Msa1287800 | 0.889857 | 1.663648e-73 | -8.615850e-47 |
| Msa0731560 | Msa1287800 | 0.802355 | 5.836223e-49 | -8.615850e-47 |
| Msa0732310 | Msa1287800 | 0.829942 | 3.880214e-55 | -8.615850e-47 |
| Msa0732710 | Msa1287800 | 0.811676 | 6.213928e-51 | -8.615850e-47 |
| Msa0733290 | Msa1287800 | 0.881477 | 2.323747e-70 | -8.615850e-47 |
| Msa0735080 | Msa1287800 | 0.826944 | 2.053866e-54 | -8.615850e-47 |
| Msa0738490 | Msa1287800 | 0.805220 | 1.482871e-49 | -8.615850e-47 |
| Msa0741990 | Msa1287800 | 0.837151 | 6.156810e-57 | -8.615850e-47 |
| Msa0743810 | Msa1287800 | 0.944467 | 1.848318e-103 | -8.615850e-47 |
| Msa0745060 | Msa1287800 | 0.924593 | 5.728136e-90 | -8.615850e-47 |
| Msa0764960 | Msa1287800 | 0.808956 | 2.400845e-50 | -8.615850e-47 |
| Msa0767720 | Msa1287800 | 0.864655 | 1.040392e-64 | -8.615850e-47 |
| Msa0768370 | Msa1287800 | 0.809540 | 1.798968e-50 | -8.615850e-47 |
| Msa0777870 | Msa1287800 | 0.854415 | 1.249456e-61 | -8.615850e-47 |
| Msa0783160 | Msa1287800 | 0.909467 | 5.513319e-82 | -8.615850e-47 |
| Msa0784290 | Msa1287800 | 0.824035 | 1.003703e-53 | -8.615850e-47 |
| Msa0784300 | Msa1287800 | 0.814209 | 1.730790e-51 | -8.615850e-47 |
| Msa0787600 | Msa1287800 | 0.896310 | 4.172077e-76 | -8.615850e-47 |
| Msa0789250 | Msa1287800 | 0.811679 | 6.206338e-51 | -8.615850e-47 |
| Msa0808010 | Msa1287800 | 0.908261 | 2.073902e-81 | -8.615850e-47 |
| Msa0808020 | Msa1287800 | 0.901316 | 3.030951e-78 | -8.615850e-47 |
| Msa0811080 | Msa1287800 | 0.830039 | 3.676283e-55 | -8.615850e-47 |
| Msa0811270 | Msa1287800 | 0.823875 | 1.094464e-53 | -8.615850e-47 |
| Msa0820150 | Msa1287800 | 0.805355 | 1.389182e-49 | -8.615850e-47 |
| Msa0824600 | Msa1287800 | 0.824274 | 8.821206e-54 | -8.615850e-47 |
| Msa0825860 | Msa1287800 | 0.934868 | 2.069708e-96 | -8.615850e-47 |
| Msa0833290 | Msa1287800 | 0.864959 | 8.352979e-65 | -8.615850e-47 |
| Msa0833300 | Msa1287800 | 0.834418 | 3.032771e-56 | -8.615850e-47 |
| Msa0123810 | Msa1287800 | 0.831396 | 1.709497e-55 | -8.615850e-47 |
| Msa0124100 | Msa1287800 | 0.847894 | 8.663685e-60 | -8.615850e-47 |
| Msa0124150 | Msa1287800 | 0.833452 | 5.288907e-56 | -8.615850e-47 |
| Msa0142220 | Msa1287800 | 0.851381 | 9.209186e-61 | -8.615850e-47 |
| Msa0145750 | Msa1287800 | 0.904693 | 9.398744e-80 | -8.615850e-47 |
| Msa0153910 | Msa1287800 | 0.853836 | 1.836080e-61 | -8.615850e-47 |
| Msa0192970 | Msa1287800 | 0.816400 | 5.639084e-52 | -8.615850e-47 |
| Msa0197010 | Msa1287800 | 0.819596 | 1.068678e-52 | -8.615850e-47 |
| Msa0200000 | Msa1287800 | 0.881839 | 1.718462e-70 | -8.615850e-47 |
| Msa0200940 | Msa1287800 | 0.806328 | 8.676947e-50 | -8.615850e-47 |
| Msa0214890 | Msa1287800 | 0.819346 | 1.218587e-52 | -8.615850e-47 |
| Msa0227480 | Msa1287800 | 0.899828 | 1.346361e-77 | -8.615850e-47 |
| Msa0231000 | Msa1287800 | 0.822411 | 2.403724e-53 | -8.615850e-47 |
| Msa0232850 | Msa1287800 | 0.879235 | 1.470624e-69 | -8.615850e-47 |
| Msa0235140 | Msa1287800 | 0.844172 | 8.909886e-59 | -8.615850e-47 |
| Msa1230430 | Msa1287800 | 0.817006 | 4.123949e-52 | -8.615850e-47 |
| Msa1246880 | Msa1287800 | 0.863388 | 2.579975e-64 | -8.615850e-47 |
| Msa1248300 | Msa1287800 | 0.827692 | 1.359533e-54 | -8.615850e-47 |
| Msa1248310 | Msa1287800 | 0.830693 | 2.543378e-55 | -8.615850e-47 |
| Msa1248370 | Msa1287800 | 0.801873 | 7.331995e-49 | -8.615850e-47 |
| Msa1260100 | Msa1287800 | 0.833815 | 4.294645e-56 | -8.615850e-47 |
| Msa1269670 | Msa1287800 | 0.924454 | 6.893389e-90 | -8.615850e-47 |
| Msa1270230 | Msa1287800 | 0.937281 | 4.467098e-98 | -8.615850e-47 |
| Msa1270240 | Msa1287800 | 0.911065 | 9.269557e-83 | -8.615850e-47 |
| Msa1270270 | Msa1287800 | 0.910083 | 2.783082e-82 | -8.615850e-47 |
| Msa1273230 | Msa1287800 | 0.839384 | 1.636060e-57 | -8.615850e-47 |
| Msa1283330 | Msa1287800 | 0.932149 | 1.312785e-94 | -8.615850e-47 |
| Msa1285930 | Msa1287800 | 0.950008 | 3.990943e-108 | -8.615850e-47 |
| Msa1287800 | Msa1287810 | 0.972434 | 9.266276e-135 | -8.615850e-47 |
| Msa1287800 | Msa1287820 | 0.880982 | 3.504134e-70 | -8.615850e-47 |
| Msa1287800 | Msa1287830 | 0.895474 | 9.264406e-76 | -8.615850e-47 |
| Msa1287800 | Msa1288560 | 0.810063 | 1.388764e-50 | -8.615850e-47 |
| Msa1287800 | Msa1289420 | 0.850426 | 1.710893e-60 | -8.615850e-47 |
| Msa1287800 | Msa1289430 | 0.880277 | 6.268459e-70 | -8.615850e-47 |
| Msa1287800 | Msa1297210 | 0.840589 | 7.938512e-58 | -8.615850e-47 |
| Msa1287800 | Msa1305480 | 0.867182 | 1.652207e-65 | -8.615850e-47 |
| Msa1287800 | Msa1307890 | 0.884856 | 1.341137e-71 | -8.615850e-47 |
| Msa1287800 | Msa1310120 | 0.856817 | 2.489799e-62 | -8.615850e-47 |
| Msa1287800 | Msa1314280 | 0.818493 | 1.904660e-52 | -8.615850e-47 |
| Msa1287800 | Msa1320300 | 0.884282 | 2.190332e-71 | -8.615850e-47 |
| Msa1287800 | Msa1321560 | 0.810088 | 1.371468e-50 | -8.615850e-47 |
| Msa1287800 | Msa1340590 | 0.888909 | 3.884172e-73 | -8.615850e-47 |
| Msa1287800 | Msa1342200 | 0.848800 | 4.864248e-60 | -8.615850e-47 |
| Msa1287800 | Msa1344520 | 0.849211 | 3.739131e-60 | -8.615850e-47 |
| Msa1287800 | Msa1369430 | 0.845257 | 4.546642e-59 | -8.615850e-47 |
| Msa1287800 | Msa1370210 | 0.801651 | 8.143276e-49 | -8.615850e-47 |
| Msa1287800 | Msa1382690 | 0.827207 | 1.776803e-54 | -8.615850e-47 |
| Msa1287800 | Msa1382700 | 0.833442 | 5.321071e-56 | -8.615850e-47 |
| Msa1287800 | Msa1386330 | 0.820537 | 6.508769e-53 | -8.615850e-47 |
| Msa1287800 | Msa1397150 | 0.840426 | 8.759863e-58 | -8.615850e-47 |
| Msa1287800 | Msa1397580 | 0.890201 | 1.219945e-73 | -8.615850e-47 |
| Msa1287800 | Msa1402790 | 0.833309 | 5.743252e-56 | -8.615850e-47 |
| Msa1287800 | Msa1404000 | 0.914881 | 1.138244e-84 | -8.615850e-47 |
| Msa1287800 | Msa1408780 | 0.874142 | 8.506574e-68 | -8.615850e-47 |
| Msa1287800 | Msa1415310 | 0.908754 | 1.209887e-81 | -8.615850e-47 |
| Msa1287800 | Msa1422180 | 0.893829 | 4.366320e-75 | -8.615850e-47 |
| Msa1287800 | Msa1433120 | 0.908634 | 1.379529e-81 | -8.615850e-47 |
| Msa1287800 | Msa1451190 | 0.818434 | 1.963867e-52 | -8.615850e-47 |
| Msa1287800 | Msa1451570 | 0.814779 | 1.294659e-51 | -8.615850e-47 |
| Msa0365500 | Msa1287800 | 0.885304 | 9.129520e-72 | -8.615850e-47 |
| Msa0366420 | Msa1287800 | 0.829877 | 4.025934e-55 | -8.615850e-47 |
| Msa0366430 | Msa1287800 | 0.853871 | 1.794452e-61 | -8.615850e-47 |
| Msa0366580 | Msa1287800 | 0.812242 | 4.678819e-51 | -8.615850e-47 |
| Msa0369730 | Msa1287800 | 0.809237 | 2.089505e-50 | -8.615850e-47 |
| Msa0384800 | Msa1287800 | 0.878364 | 2.980441e-69 | -8.615850e-47 |
| Msa0384890 | Msa1287800 | 0.819570 | 1.083641e-52 | -8.615850e-47 |
| Msa0394970 | Msa1287800 | 0.825844 | 3.756483e-54 | -8.615850e-47 |
| Msa0396600 | Msa1287800 | 0.804250 | 2.364491e-49 | -8.615850e-47 |
| Msa0406120 | Msa1287800 | 0.864520 | 1.146478e-64 | -8.615850e-47 |
| Msa0406280 | Msa1287800 | 0.836697 | 8.040771e-57 | -8.615850e-47 |
| Msa0407750 | Msa1287800 | 0.829480 | 5.027134e-55 | -8.615850e-47 |
| Msa0414410 | Msa1287800 | 0.914983 | 1.009031e-84 | -8.615850e-47 |
| Msa0414420 | Msa1287800 | 0.951801 | 9.471321e-110 | -8.615850e-47 |
| Msa0423020 | Msa1287800 | 0.800454 | 1.430230e-48 | -8.615850e-47 |
| Msa0435230 | Msa1287800 | 0.802531 | 5.368371e-49 | -8.615850e-47 |
| Msa0436780 | Msa1287800 | 0.867938 | 9.459977e-66 | -8.615850e-47 |
| Msa0436800 | Msa1287800 | 0.827933 | 1.189570e-54 | -8.615850e-47 |
| Msa0438620 | Msa1287800 | 0.895173 | 1.232758e-75 | -8.615850e-47 |
| Msa0444130 | Msa1287800 | 0.812323 | 4.492908e-51 | -8.615850e-47 |
| Msa0450000 | Msa1287800 | 0.898974 | 3.132888e-77 | -8.615850e-47 |
| Msa0450570 | Msa1287800 | 0.874237 | 7.903536e-68 | -8.615850e-47 |
| Msa0451730 | Msa1287800 | 0.859763 | 3.303519e-63 | -8.615850e-47 |
| Msa0452900 | Msa1287800 | 0.948804 | 4.550443e-107 | -8.615850e-47 |
| Msa0452910 | Msa1287800 | 0.836474 | 9.161203e-57 | -8.615850e-47 |
| Msa0453120 | Msa1287800 | 0.887972 | 8.916719e-73 | -8.615850e-47 |
| Msa0454370 | Msa1287800 | 0.858323 | 8.913811e-63 | -8.615850e-47 |
| Msa0454910 | Msa1287800 | 0.873132 | 1.863806e-67 | -8.615850e-47 |
| Msa0459160 | Msa1287800 | 0.883065 | 6.148621e-71 | -8.615850e-47 |
| Msa0459170 | Msa1287800 | 0.861676 | 8.679555e-64 | -8.615850e-47 |
| Msa0979850 | Msa1287800 | 0.842364 | 2.705200e-58 | -8.615850e-47 |
| Msa0981270 | Msa1287800 | 0.843436 | 1.402872e-58 | -8.615850e-47 |
| Msa0981370 | Msa1287800 | 0.885737 | 6.279590e-72 | -8.615850e-47 |
| Msa0986360 | Msa1287800 | 0.801365 | 9.320063e-49 | -8.615850e-47 |
| Msa0986400 | Msa1287800 | 0.850399 | 1.741858e-60 | -8.615850e-47 |
| Msa0989060 | Msa1287800 | 0.915054 | 9.276776e-85 | -8.615850e-47 |
| Msa0989890 | Msa1287800 | 0.802300 | 5.988840e-49 | -8.615850e-47 |
| Msa1016280 | Msa1287800 | 0.929326 | 8.158944e-93 | -8.615850e-47 |
| Msa1023010 | Msa1287800 | 0.813217 | 2.862649e-51 | -8.615850e-47 |
| Msa1023050 | Msa1287800 | 0.831792 | 1.365204e-55 | -8.615850e-47 |
| Msa1024240 | Msa1287800 | 0.853200 | 2.797057e-61 | -8.615850e-47 |
| Msa1025360 | Msa1287800 | 0.949050 | 2.780130e-107 | -8.615850e-47 |
| Msa1025370 | Msa1287800 | 0.935321 | 1.019324e-96 | -8.615850e-47 |
| Msa1030060 | Msa1287800 | 0.838972 | 2.093485e-57 | -8.615850e-47 |
| Msa1037200 | Msa1287800 | 0.824621 | 7.309251e-54 | -8.615850e-47 |
| Msa1044830 | Msa1287800 | 0.936725 | 1.095804e-97 | -8.615850e-47 |
| Msa1044840 | Msa1287800 | 0.948872 | 3.976038e-107 | -8.615850e-47 |
| Msa1060840 | Msa1287800 | 0.871602 | 6.029241e-67 | -8.615850e-47 |
| Msa1068420 | Msa1287800 | 0.801708 | 7.926915e-49 | -8.615850e-47 |
| Msa1077460 | Msa1287800 | 0.840143 | 1.038074e-57 | -8.615850e-47 |
| Msa1087490 | Msa1287800 | 0.804613 | 1.985959e-49 | -8.615850e-47 |
| Msa1088790 | Msa1287800 | 0.810115 | 1.352999e-50 | -8.615850e-47 |
| Msa1092990 | Msa1287800 | 0.910556 | 1.640944e-82 | -8.615850e-47 |
| Msa1096580 | Msa1287800 | 0.839535 | 1.495093e-57 | -8.615850e-47 |
| Msa1099970 | Msa1287800 | 0.814712 | 1.339879e-51 | -8.615850e-47 |
| Msa1100980 | Msa1287800 | 0.928851 | 1.607346e-92 | -8.615850e-47 |
| Msa0247260 | Msa1287800 | 0.824958 | 6.088479e-54 | -8.615850e-47 |
| Msa0256440 | Msa1287800 | 0.802670 | 5.024380e-49 | -8.615850e-47 |
| Msa0267000 | Msa1287800 | 0.934093 | 6.877327e-96 | -8.615850e-47 |
| Msa0267010 | Msa1287800 | 0.943548 | 9.869481e-103 | -8.615850e-47 |
| Msa0270520 | Msa1287800 | 0.851273 | 9.881469e-61 | -8.615850e-47 |
| Msa0282310 | Msa1287800 | 0.825997 | 3.454204e-54 | -8.615850e-47 |
| Msa0285810 | Msa1287800 | 0.840105 | 1.062246e-57 | -8.615850e-47 |
| Msa0304170 | Msa1287800 | 0.869986 | 2.051894e-66 | -8.615850e-47 |
| Msa0306460 | Msa1287800 | 0.854170 | 1.470892e-61 | -8.615850e-47 |
| Msa0309020 | Msa1287800 | 0.808674 | 2.757460e-50 | -8.615850e-47 |
| Msa0313760 | Msa1287800 | 0.853614 | 2.126860e-61 | -8.615850e-47 |
| Msa0342240 | Msa1287800 | 0.926824 | 2.753051e-91 | -8.615850e-47 |
| Msa0360510 | Msa1287800 | 0.913622 | 4.972712e-84 | -8.615850e-47 |
| Msa0362420 | Msa1287800 | 0.818050 | 2.399441e-52 | -8.615850e-47 |
| Msa0363300 | Msa1287800 | 0.835592 | 1.534504e-56 | -8.615850e-47 |
| Msa0363750 | Msa1287800 | 0.810845 | 9.410528e-51 | -8.615850e-47 |
| Msa1109440 | Msa1287800 | 0.920132 | 1.884326e-87 | -8.615850e-47 |
| Msa1111150 | Msa1287800 | 0.800139 | 1.657925e-48 | -8.615850e-47 |
| Msa1112300 | Msa1287800 | 0.813381 | 2.635056e-51 | -8.615850e-47 |
| Msa1117150 | Msa1287800 | 0.804081 | 2.563532e-49 | -8.615850e-47 |
| Msa1121200 | Msa1287800 | 0.909360 | 6.208281e-82 | -8.615850e-47 |
| Msa1121480 | Msa1287800 | 0.807603 | 4.663019e-50 | -8.615850e-47 |
| Msa1135220 | Msa1287800 | 0.809051 | 2.290474e-50 | -8.615850e-47 |
| Msa1135740 | Msa1287800 | 0.910521 | 1.706828e-82 | -8.615850e-47 |
| Msa1136090 | Msa1287800 | 0.845532 | 3.830093e-59 | -8.615850e-47 |
| Msa1146100 | Msa1287800 | 0.801319 | 9.524306e-49 | -8.615850e-47 |
| Msa1146110 | Msa1287800 | 0.916703 | 1.294268e-85 | -8.615850e-47 |
| Msa1149360 | Msa1287800 | 0.859733 | 3.371773e-63 | -8.615850e-47 |
| Msa1150370 | Msa1287800 | 0.889012 | 3.545422e-73 | -8.615850e-47 |
| Msa1150640 | Msa1287800 | 0.836757 | 7.760546e-57 | -8.615850e-47 |
| Msa1160670 | Msa1287800 | 0.811804 | 5.829184e-51 | -8.615850e-47 |
| Msa1164120 | Msa1287800 | 0.840238 | 9.808773e-58 | -8.615850e-47 |
| Msa1173920 | Msa1287800 | 0.866774 | 2.229067e-65 | -8.615850e-47 |
| Msa1178340 | Msa1287800 | 0.817618 | 3.003938e-52 | -8.615850e-47 |
| Msa1182090 | Msa1287800 | 0.812608 | 3.892727e-51 | -8.615850e-47 |
| Msa1184420 | Msa1287800 | 0.807402 | 5.144726e-50 | -8.615850e-47 |
| Msa1187940 | Msa1287800 | 0.902258 | 1.165144e-78 | -8.615850e-47 |
| Msa1187950 | Msa1287800 | 0.890235 | 1.183181e-73 | -8.615850e-47 |
| Msa1192640 | Msa1287800 | 0.946193 | 7.359126e-105 | -8.615850e-47 |
| Msa1193730 | Msa1287800 | 0.853378 | 2.485711e-61 | -8.615850e-47 |
| Msa0485030 | Msa1287800 | 0.861940 | 7.207741e-64 | -8.615850e-47 |
| Msa0491590 | Msa1287800 | 0.896837 | 2.513857e-76 | -8.615850e-47 |
| Msa0502760 | Msa1287800 | 0.855607 | 5.633728e-62 | -8.615850e-47 |
| Msa0505080 | Msa1287800 | 0.808749 | 2.657967e-50 | -8.615850e-47 |
| Msa0506190 | Msa1287800 | 0.835549 | 1.572655e-56 | -8.615850e-47 |
| Msa0506270 | Msa1287800 | 0.862734 | 4.107858e-64 | -8.615850e-47 |
| Msa0534540 | Msa1287800 | 0.859779 | 3.265108e-63 | -8.615850e-47 |
| Msa0564890 | Msa1287800 | 0.926638 | 3.559486e-91 | -8.615850e-47 |
| Msa0589780 | Msa1287800 | 0.804022 | 2.637098e-49 | -8.615850e-47 |
| Msa0590780 | Msa1287800 | 0.813105 | 3.028564e-51 | -8.615850e-47 |
| Msa0596150 | Msa1287800 | 0.872512 | 3.003543e-67 | -8.615850e-47 |
| Msa0598780 | Msa1287800 | 0.811717 | 6.087672e-51 | -8.615850e-47 |
| Msa0845930 | Msa1287800 | 0.819035 | 1.434457e-52 | -8.615850e-47 |
| Msa0846210 | Msa1287800 | 0.858275 | 9.210441e-63 | -8.615850e-47 |
| Msa0846330 | Msa1287800 | 0.896676 | 2.933935e-76 | -8.615850e-47 |
| Msa0846350 | Msa1287800 | 0.897378 | 1.490779e-76 | -8.615850e-47 |
| Msa0848960 | Msa1287800 | 0.860512 | 1.961240e-63 | -8.615850e-47 |
| Msa0854980 | Msa1287800 | 0.839834 | 1.249960e-57 | -8.615850e-47 |
| Msa0858980 | Msa1287800 | 0.868687 | 5.425691e-66 | -8.615850e-47 |
| Msa0865320 | Msa1287800 | 0.916217 | 2.323546e-85 | -8.615850e-47 |
| Msa0866810 | Msa1287800 | 0.806734 | 7.125135e-50 | -8.615850e-47 |
| Msa0872230 | Msa1287800 | 0.861001 | 1.393499e-63 | -8.615850e-47 |
| Msa0873460 | Msa1287800 | 0.827983 | 1.157239e-54 | -8.615850e-47 |
| Msa0885280 | Msa1287800 | 0.808289 | 3.332008e-50 | -8.615850e-47 |
| Msa0885290 | Msa1287800 | 0.862533 | 4.737492e-64 | -8.615850e-47 |
| Msa0887920 | Msa1287800 | 0.870113 | 1.865076e-66 | -8.615850e-47 |
| Msa0888370 | Msa1287800 | 0.884679 | 1.560659e-71 | -8.615850e-47 |
| Msa0888420 | Msa1287800 | 0.858785 | 6.491511e-63 | -8.615850e-47 |
| Msa0895270 | Msa1287800 | 0.823653 | 1.233956e-53 | -8.615850e-47 |
| Msa0896080 | Msa1287800 | 0.855713 | 5.245050e-62 | -8.615850e-47 |
| Msa0899430 | Msa1287800 | 0.812995 | 3.202625e-51 | -8.615850e-47 |
| Msa0899450 | Msa1287800 | 0.802201 | 6.276856e-49 | -8.615850e-47 |
| Msa0907260 | Msa1287800 | 0.836981 | 6.805183e-57 | -8.615850e-47 |
| Msa0914760 | Msa1287800 | 0.845160 | 4.828780e-59 | -8.615850e-47 |
| Msa0922150 | Msa1287800 | 0.810905 | 9.133793e-51 | -8.615850e-47 |
| Msa0952190 | Msa1287800 | 0.814159 | 1.775165e-51 | -8.615850e-47 |
| Msa0952350 | Msa1287800 | 0.823308 | 1.485170e-53 | -8.615850e-47 |
| Msa0952720 | Msa1287800 | 0.851067 | 1.129670e-60 | -8.615850e-47 |
| Msa0954020 | Msa1287800 | 0.801159 | 1.026992e-48 | -8.615850e-47 |
| Msa0954910 | Msa1287800 | 0.808744 | 2.665013e-50 | -8.615850e-47 |
| Msa0956270 | Msa1287800 | 0.841253 | 5.315305e-58 | -8.615850e-47 |
| Msa0957680 | Msa1287800 | 0.842252 | 2.897030e-58 | -8.615850e-47 |
| Msa0957860 | Msa1287800 | 0.825136 | 5.525995e-54 | -8.615850e-47 |
| Msa0957960 | Msa1287800 | 0.823999 | 1.023396e-53 | -8.615850e-47 |
| Msa0958550 | Msa1287800 | 0.806690 | 7.276887e-50 | -8.615850e-47 |
| Msa0974870 | Msa1287800 | 0.822879 | 1.869949e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287800 | MtrunA17_Chr2g0289121 | 90.323 | 155 | 15 | 0 | 2 | 156 | 640 | 794 | 2.59e-96 | 295 |
| Msa1287800 | MtrunA17_Chr2g0289091 | 86.207 | 145 | 20 | 0 | 2 | 146 | 276 | 420 | 8.13e-89 | 265 |
| Msa1287800 | MtrunA17_Chr2g0289031 | 78.846 | 156 | 23 | 1 | 1 | 156 | 223 | 368 | 5.10e-84 | 252 |
| Msa1287800 | MtrunA17_Chr8g0361391 | 87.603 | 121 | 14 | 1 | 4 | 124 | 18 | 137 | 7.76e-76 | 223 |
| Msa1287800 | MtrunA17_Chr4g0075261 | 69.737 | 152 | 39 | 2 | 12 | 156 | 688 | 839 | 1.33e-66 | 217 |
| Msa1287800 | MtrunA17_Chr1g0183311 | 72.727 | 121 | 33 | 0 | 36 | 156 | 734 | 854 | 1.66e-58 | 194 |
| Msa1287800 | MtrunA17_Chr1g0211711 | 66.667 | 135 | 45 | 0 | 22 | 156 | 889 | 1023 | 6.33e-57 | 191 |
| Msa1287800 | MtrunA17_Chr5g0426961 | 71.074 | 121 | 35 | 0 | 36 | 156 | 687 | 807 | 5.21e-56 | 187 |
| Msa1287800 | MtrunA17_Chr5g0420361 | 66.165 | 133 | 44 | 1 | 24 | 156 | 639 | 770 | 6.31e-56 | 187 |
| Msa1287800 | MtrunA17_Chr6g0472441 | 67.769 | 121 | 39 | 0 | 36 | 156 | 572 | 692 | 6.96e-54 | 181 |
| Msa1287800 | MtrunA17_Chr7g0275771 | 65.574 | 122 | 42 | 0 | 35 | 156 | 778 | 899 | 9.02e-50 | 170 |
| Msa1287800 | MtrunA17_Chr1g0147021 | 63.200 | 125 | 46 | 0 | 32 | 156 | 1546 | 1670 | 1.93e-48 | 167 |
| Msa1287800 | MtrunA17_Chr1g0211701 | 72.414 | 87 | 24 | 0 | 70 | 156 | 4 | 90 | 6.47e-40 | 132 |
| Msa1287800 | MtrunA17_Chr1g0211661 | 68.539 | 89 | 28 | 0 | 36 | 124 | 777 | 865 | 6.10e-37 | 134 |
| Msa1287800 | MtrunA17_Chr4g0048531 | 49.600 | 125 | 62 | 1 | 32 | 156 | 1128 | 1251 | 1.96e-35 | 129 |
| Msa1287800 | MtrunA17_Chr2g0281051 | 48.333 | 120 | 62 | 0 | 37 | 156 | 810 | 929 | 6.41e-33 | 122 |
| Msa1287800 | MtrunA17_Chr1g0192011 | 43.750 | 144 | 74 | 3 | 16 | 156 | 796 | 935 | 7.58e-33 | 122 |
| Msa1287800 | MtrunA17_Chr5g0448301 | 64.407 | 59 | 21 | 0 | 36 | 94 | 573 | 631 | 1.06e-20 | 87.4 |
| Msa1287800 | MtrunA17_Chr1g0211691 | 52.941 | 51 | 24 | 0 | 22 | 72 | 895 | 945 | 2.08e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287800 | AT1G62310.1 | 70.896 | 134 | 38 | 1 | 24 | 156 | 736 | 869 | 2.81e-61 | 202 |
| Msa1287800 | AT1G11950.1 | 74.194 | 124 | 32 | 0 | 33 | 156 | 720 | 843 | 1.58e-60 | 201 |
| Msa1287800 | AT1G11950.3 | 74.194 | 124 | 32 | 0 | 33 | 156 | 720 | 843 | 1.58e-60 | 201 |
| Msa1287800 | AT3G07610.1 | 66.942 | 121 | 40 | 0 | 36 | 156 | 746 | 866 | 1.14e-52 | 179 |
| Msa1287800 | AT3G07610.3 | 66.942 | 121 | 40 | 0 | 36 | 156 | 768 | 888 | 1.54e-52 | 179 |
| Msa1287800 | AT4G00990.1 | 59.836 | 122 | 49 | 0 | 35 | 156 | 683 | 804 | 2.46e-46 | 161 |
| Msa1287800 | AT1G11950.2 | 71.951 | 82 | 23 | 0 | 33 | 114 | 720 | 801 | 2.63e-35 | 129 |
| Msa1287800 | AT4G00990.3 | 55.208 | 96 | 43 | 0 | 35 | 130 | 683 | 778 | 4.91e-32 | 120 |
| Msa1287800 | AT4G00990.2 | 60.227 | 88 | 35 | 0 | 35 | 122 | 683 | 770 | 9.49e-32 | 119 |
| Msa1287800 | AT4G21430.1 | 44.355 | 124 | 68 | 1 | 32 | 155 | 764 | 886 | 4.89e-29 | 112 |
| Msa1287800 | AT1G09060.2 | 44.444 | 126 | 66 | 2 | 31 | 156 | 744 | 865 | 4.98e-26 | 103 |
| Msa1287800 | AT1G09060.1 | 44.444 | 126 | 66 | 2 | 31 | 156 | 744 | 865 | 4.98e-26 | 103 |
| Msa1287800 | AT1G09060.4 | 44.444 | 126 | 66 | 2 | 31 | 156 | 758 | 879 | 4.99e-26 | 103 |
| Msa1287800 | AT1G09060.3 | 44.444 | 126 | 66 | 2 | 31 | 156 | 758 | 879 | 4.99e-26 | 103 |
Find 23 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACATTCCAAAGAATTT+AGG | 0.229610 | 8_3:-39414283 | Msa1287800:CDS |
| AAGAAGCTGGAGGCAGAATT+TGG | 0.254763 | 8_3:-39414098 | Msa1287800:intron |
| ATAAGTACGCCTAAATTCTT+TGG | 0.261889 | 8_3:+39414274 | None:intergenic |
| GAGGGTCTTGTTAAAGATAA+TGG | 0.314479 | 8_3:-39414440 | Msa1287800:CDS |
| TCCCTTGCTCAGTGATTCTT+AGG | 0.341410 | 8_3:+39412191 | None:intergenic |
| AGAAACAGCTGGTGCACTTT+GGG | 0.359579 | 8_3:-39414351 | Msa1287800:CDS |
| TCACCTTCAGATTTCTAACT+TGG | 0.413712 | 8_3:+39413938 | None:intergenic |
| AGCTTTCCTTTGATCTCAAA+AGG | 0.436249 | 8_3:+39414413 | None:intergenic |
| CAGAAACAGCTGGTGCACTT+TGG | 0.453707 | 8_3:-39414352 | Msa1287800:CDS |
| TTATTGTTCTCCAGTAAAAG+AGG | 0.483787 | 8_3:-39414255 | Msa1287800:intron |
| TTGCTCAGTGATTCTTAGGA+AGG | 0.546083 | 8_3:+39412195 | None:intergenic |
| TTCAGATTTCTAACTTGGTG+AGG | 0.548770 | 8_3:+39413943 | None:intergenic |
| TCAGATTTCTAACTTGGTGA+GGG | 0.555680 | 8_3:+39413944 | None:intergenic |
| ACTTGGTGAGGGCATCCAGC+AGG | 0.556782 | 8_3:+39413955 | None:intergenic |
| CTTCGTGTCACCAGAAAATG+TGG | 0.557709 | 8_3:-39412252 | Msa1287800:CDS |
| TAAGGCTCAAGTTATGAAAG+AGG | 0.564068 | 8_3:-39414459 | None:intergenic |
| AAAGATACATCAGAAACAGC+TGG | 0.604136 | 8_3:-39414362 | Msa1287800:CDS |
| GAAGCAGTATTTATACCTGC+TGG | 0.606997 | 8_3:-39413970 | Msa1287800:CDS |
| TCACCAAGTTAGAAATCTGA+AGG | 0.615043 | 8_3:-39413941 | Msa1287800:intron |
| AAGGCTCAAGTTATGAAAGA+GGG | 0.615301 | 8_3:-39414458 | None:intergenic |
| AGTTTCTGCTCAAAAGTCAA+AGG | 0.620576 | 8_3:+39413997 | None:intergenic |
| GGTCTTGTTAAAGATAATGG+AGG | 0.669806 | 8_3:-39414437 | Msa1287800:CDS |
| TGAGCATAAGAAGAAGCTGG+AGG | 0.677277 | 8_3:-39414108 | Msa1287800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATATTAGATTTGAAA+AGG | - | chr8_3:39413396-39413415 | Msa1287800:intron | 10.0% |
| !!! | TAAATTAAAGATTTGAAATT+GGG | + | chr8_3:39413987-39414006 | None:intergenic | 10.0% |
| !!! | ATAAATTAAAGATTTGAAAT+TGG | + | chr8_3:39413988-39414007 | None:intergenic | 10.0% |
| !! | ATATTATATTAGATTTGAAA+AGG | - | chr8_3:39413396-39413415 | Msa1287800:intron | 10.0% |
| !!! | TAAATTAAAGATTTGAAATT+GGG | + | chr8_3:39413987-39414006 | None:intergenic | 10.0% |
| !!! | ATAAATTAAAGATTTGAAAT+TGG | + | chr8_3:39413988-39414007 | None:intergenic | 10.0% |
| !!! | ATCTTACTCTAAAAAAAATT+AGG | - | chr8_3:39412917-39412936 | Msa1287800:intron | 15.0% |
| !! | AATTAATAATTGTAACTCTA+TGG | + | chr8_3:39413912-39413931 | None:intergenic | 15.0% |
| !! | TTTATGTCATATTATTTCAA+CGG | - | chr8_3:39413931-39413950 | Msa1287800:intron | 15.0% |
| !!! | ATCTTACTCTAAAAAAAATT+AGG | - | chr8_3:39412917-39412936 | Msa1287800:intron | 15.0% |
| !! | AATTAATAATTGTAACTCTA+TGG | + | chr8_3:39413912-39413931 | None:intergenic | 15.0% |
| !! | TTTATGTCATATTATTTCAA+CGG | - | chr8_3:39413931-39413950 | Msa1287800:intron | 15.0% |
| !!! | TAATATAATACCTCTTTTAC+TGG | + | chr8_3:39412403-39412422 | None:intergenic | 20.0% |
| !! | CAAAAGTCAAATAAAAACAT+TGG | + | chr8_3:39412519-39412538 | None:intergenic | 20.0% |
| !! | AATCTATTGATGAATATATG+AGG | + | chr8_3:39412955-39412974 | None:intergenic | 20.0% |
| !! | TTGTATTTATATCATTATCC+TGG | - | chr8_3:39413288-39413307 | Msa1287800:intron | 20.0% |
| !! | TGTATTTATATCATTATCCT+GGG | - | chr8_3:39413289-39413308 | Msa1287800:intron | 20.0% |
| !!! | AGCAATATCTTATTTTTTTG+TGG | - | chr8_3:39413854-39413873 | Msa1287800:intron | 20.0% |
| !! | TATCCTTATTAATATAGTGT+GGG | + | chr8_3:39414015-39414034 | None:intergenic | 20.0% |
| !! | TTATCCTTATTAATATAGTG+TGG | + | chr8_3:39414016-39414035 | None:intergenic | 20.0% |
| !! | ACCAAAATGACTTATAATTT+AGG | - | chr8_3:39414106-39414125 | Msa1287800:CDS | 20.0% |
| !! | CCAAAATGACTTATAATTTA+GGG | - | chr8_3:39414107-39414126 | Msa1287800:CDS | 20.0% |
| !! | AAACTTAAATTTAAGTCAAG+AGG | + | chr8_3:39414171-39414190 | None:intergenic | 20.0% |
| !!! | TAATATAATACCTCTTTTAC+TGG | + | chr8_3:39412403-39412422 | None:intergenic | 20.0% |
| !! | CAAAAGTCAAATAAAAACAT+TGG | + | chr8_3:39412519-39412538 | None:intergenic | 20.0% |
| !! | AATCTATTGATGAATATATG+AGG | + | chr8_3:39412955-39412974 | None:intergenic | 20.0% |
| !! | TTGTATTTATATCATTATCC+TGG | - | chr8_3:39413288-39413307 | Msa1287800:intron | 20.0% |
| !! | TGTATTTATATCATTATCCT+GGG | - | chr8_3:39413289-39413308 | Msa1287800:intron | 20.0% |
| !!! | AGCAATATCTTATTTTTTTG+TGG | - | chr8_3:39413854-39413873 | Msa1287800:intron | 20.0% |
| !! | TATCCTTATTAATATAGTGT+GGG | + | chr8_3:39414015-39414034 | None:intergenic | 20.0% |
| !! | TTATCCTTATTAATATAGTG+TGG | + | chr8_3:39414016-39414035 | None:intergenic | 20.0% |
| !! | ACCAAAATGACTTATAATTT+AGG | - | chr8_3:39414106-39414125 | Msa1287800:CDS | 20.0% |
| !! | CCAAAATGACTTATAATTTA+GGG | - | chr8_3:39414107-39414126 | Msa1287800:CDS | 20.0% |
| !! | AAACTTAAATTTAAGTCAAG+AGG | + | chr8_3:39414171-39414190 | None:intergenic | 20.0% |
| ! | GAAAACATTCCAAAGAATTT+AGG | - | chr8_3:39412362-39412381 | Msa1287800:intron | 25.0% |
| ! | TAAAAACATTGGTCATGAAT+AGG | + | chr8_3:39412508-39412527 | None:intergenic | 25.0% |
| ! | CAAGAATCTTAATCAATTAC+AGG | - | chr8_3:39412618-39412637 | Msa1287800:intron | 25.0% |
| ! | GCGTGAAAATGAAATAAAAA+GGG | + | chr8_3:39412779-39412798 | None:intergenic | 25.0% |
| ! | GAATATATGAGGTCAAATTA+TGG | + | chr8_3:39412944-39412963 | None:intergenic | 25.0% |
| ! | TCATCAATCAATCAAAATGT+AGG | - | chr8_3:39413134-39413153 | Msa1287800:intron | 25.0% |
| ! | TTACTAGTGAATTTATTTGC+TGG | - | chr8_3:39413336-39413355 | Msa1287800:intron | 25.0% |
| ! | TATGTTAAGTTTATGTGTCT+AGG | - | chr8_3:39413524-39413543 | Msa1287800:intron | 25.0% |
| ! | GCATATCATAAGTATTACAT+AGG | + | chr8_3:39413578-39413597 | None:intergenic | 25.0% |
| !! | TGTAGTATTGAAGAAACTAA+TGG | - | chr8_3:39413830-39413849 | Msa1287800:intron | 25.0% |
| !!! | TTTTTTTGTGGTTACATCAA+TGG | - | chr8_3:39413866-39413885 | Msa1287800:intron | 25.0% |
| ! | TTTCCCACACTATATTAATA+AGG | - | chr8_3:39414009-39414028 | Msa1287800:intron | 25.0% |
| !! | CCCTAAATTATAAGTCATTT+TGG | + | chr8_3:39414110-39414129 | None:intergenic | 25.0% |
| ! | TAAATAGTACATGTTTCTTG+TGG | - | chr8_3:39414190-39414209 | Msa1287800:intron | 25.0% |
| ! | GAAAACATTCCAAAGAATTT+AGG | - | chr8_3:39412362-39412381 | Msa1287800:intron | 25.0% |
| ! | TAAAAACATTGGTCATGAAT+AGG | + | chr8_3:39412508-39412527 | None:intergenic | 25.0% |
| ! | CAAGAATCTTAATCAATTAC+AGG | - | chr8_3:39412618-39412637 | Msa1287800:intron | 25.0% |
| ! | GCGTGAAAATGAAATAAAAA+GGG | + | chr8_3:39412779-39412798 | None:intergenic | 25.0% |
| ! | GAATATATGAGGTCAAATTA+TGG | + | chr8_3:39412944-39412963 | None:intergenic | 25.0% |
| ! | TCATCAATCAATCAAAATGT+AGG | - | chr8_3:39413134-39413153 | Msa1287800:intron | 25.0% |
| ! | TTACTAGTGAATTTATTTGC+TGG | - | chr8_3:39413336-39413355 | Msa1287800:intron | 25.0% |
| ! | TATGTTAAGTTTATGTGTCT+AGG | - | chr8_3:39413524-39413543 | Msa1287800:intron | 25.0% |
| ! | GCATATCATAAGTATTACAT+AGG | + | chr8_3:39413578-39413597 | None:intergenic | 25.0% |
| !! | TGTAGTATTGAAGAAACTAA+TGG | - | chr8_3:39413830-39413849 | Msa1287800:intron | 25.0% |
| !!! | TTTTTTTGTGGTTACATCAA+TGG | - | chr8_3:39413866-39413885 | Msa1287800:intron | 25.0% |
| ! | TTTCCCACACTATATTAATA+AGG | - | chr8_3:39414009-39414028 | Msa1287800:intron | 25.0% |
| !! | CCCTAAATTATAAGTCATTT+TGG | + | chr8_3:39414110-39414129 | None:intergenic | 25.0% |
| ! | TAAATAGTACATGTTTCTTG+TGG | - | chr8_3:39414190-39414209 | Msa1287800:intron | 25.0% |
| ! | GATGTATCTTTTGTGATTGA+TGG | + | chr8_3:39412274-39412293 | None:intergenic | 30.0% |
| ATAAGTACGCCTAAATTCTT+TGG | + | chr8_3:39412374-39412393 | None:intergenic | 30.0% | |
| TTATTGTTCTCCAGTAAAAG+AGG | - | chr8_3:39412390-39412409 | Msa1287800:intron | 30.0% | |
| AAGCAACAAAAAAGTTAGTG+AGG | + | chr8_3:39412474-39412493 | None:intergenic | 30.0% | |
| !!! | CACTAACTTTTTTGTTGCTT+AGG | - | chr8_3:39412474-39412493 | Msa1287800:intron | 30.0% |
| AAAGAACAAAAAGGGTAAAG+AGG | + | chr8_3:39412753-39412772 | None:intergenic | 30.0% | |
| CGCGTGAAAATGAAATAAAA+AGG | + | chr8_3:39412780-39412799 | None:intergenic | 30.0% | |
| ACACAACTTCACAAGTAATA+TGG | + | chr8_3:39412870-39412889 | None:intergenic | 30.0% | |
| GATTAAAATGCATGTGATCA+TGG | - | chr8_3:39412971-39412990 | Msa1287800:intron | 30.0% | |
| !!! | GTGATCATGGTGTTTTTTTT+AGG | - | chr8_3:39412984-39413003 | Msa1287800:intron | 30.0% |
| ACATACTAGTACGTTACAAT+GGG | + | chr8_3:39413112-39413131 | None:intergenic | 30.0% | |
| TACATACTAGTACGTTACAA+TGG | + | chr8_3:39413113-39413132 | None:intergenic | 30.0% | |
| GTGATCATAAATACACTCTT+TGG | - | chr8_3:39413156-39413175 | Msa1287800:intron | 30.0% | |
| !! | TGAAAAGGAGCATCATATTA+TGG | - | chr8_3:39413411-39413430 | Msa1287800:intron | 30.0% |
| !!! | GATATGCCATACTTTTTTTG+AGG | - | chr8_3:39413591-39413610 | Msa1287800:intron | 30.0% |
| TCTCTTCCTCAAAAAAAGTA+TGG | + | chr8_3:39413600-39413619 | None:intergenic | 30.0% | |
| ! | TGTGACCAAACCAAAATTTT+TGG | - | chr8_3:39413761-39413780 | Msa1287800:intron | 30.0% |
| ATCATAGAGAAAATCTTGTG+TGG | + | chr8_3:39413794-39413813 | None:intergenic | 30.0% | |
| ! | GATGTATCTTTTGTGATTGA+TGG | + | chr8_3:39412274-39412293 | None:intergenic | 30.0% |
| ATAAGTACGCCTAAATTCTT+TGG | + | chr8_3:39412374-39412393 | None:intergenic | 30.0% | |
| TTATTGTTCTCCAGTAAAAG+AGG | - | chr8_3:39412390-39412409 | Msa1287800:intron | 30.0% | |
| AAGCAACAAAAAAGTTAGTG+AGG | + | chr8_3:39412474-39412493 | None:intergenic | 30.0% | |
| !!! | CACTAACTTTTTTGTTGCTT+AGG | - | chr8_3:39412474-39412493 | Msa1287800:intron | 30.0% |
| AAAGAACAAAAAGGGTAAAG+AGG | + | chr8_3:39412753-39412772 | None:intergenic | 30.0% | |
| CGCGTGAAAATGAAATAAAA+AGG | + | chr8_3:39412780-39412799 | None:intergenic | 30.0% | |
| ACACAACTTCACAAGTAATA+TGG | + | chr8_3:39412870-39412889 | None:intergenic | 30.0% | |
| GATTAAAATGCATGTGATCA+TGG | - | chr8_3:39412971-39412990 | Msa1287800:intron | 30.0% | |
| !!! | GTGATCATGGTGTTTTTTTT+AGG | - | chr8_3:39412984-39413003 | Msa1287800:intron | 30.0% |
| ACATACTAGTACGTTACAAT+GGG | + | chr8_3:39413112-39413131 | None:intergenic | 30.0% | |
| TACATACTAGTACGTTACAA+TGG | + | chr8_3:39413113-39413132 | None:intergenic | 30.0% | |
| GTGATCATAAATACACTCTT+TGG | - | chr8_3:39413156-39413175 | Msa1287800:intron | 30.0% | |
| !! | TGAAAAGGAGCATCATATTA+TGG | - | chr8_3:39413411-39413430 | Msa1287800:intron | 30.0% |
| !!! | GATATGCCATACTTTTTTTG+AGG | - | chr8_3:39413591-39413610 | Msa1287800:intron | 30.0% |
| TCTCTTCCTCAAAAAAAGTA+TGG | + | chr8_3:39413600-39413619 | None:intergenic | 30.0% | |
| ! | TGTGACCAAACCAAAATTTT+TGG | - | chr8_3:39413761-39413780 | Msa1287800:intron | 30.0% |
| ATCATAGAGAAAATCTTGTG+TGG | + | chr8_3:39413794-39413813 | None:intergenic | 30.0% | |
| !! | GAGGGTCTTGTTAAAGATAA+TGG | - | chr8_3:39412205-39412224 | Msa1287800:CDS | 35.0% |
| !! | GGTCTTGTTAAAGATAATGG+AGG | - | chr8_3:39412208-39412227 | Msa1287800:CDS | 35.0% |
| AGCTTTCCTTTGATCTCAAA+AGG | + | chr8_3:39412235-39412254 | None:intergenic | 35.0% | |
| AAAGATACATCAGAAACAGC+TGG | - | chr8_3:39412283-39412302 | Msa1287800:intron | 35.0% | |
| ! | TTTTGAGCATAAGAAGAAGC+TGG | - | chr8_3:39412534-39412553 | Msa1287800:intron | 35.0% |
| AGTTTCTGCTCAAAAGTCAA+AGG | + | chr8_3:39412651-39412670 | None:intergenic | 35.0% | |
| ! | TTGACTTTTGAGCAGAAACT+TGG | - | chr8_3:39412651-39412670 | Msa1287800:intron | 35.0% |
| ! | TCAGATTTCTAACTTGGTGA+GGG | + | chr8_3:39412704-39412723 | None:intergenic | 35.0% |
| ! | TTCAGATTTCTAACTTGGTG+AGG | + | chr8_3:39412705-39412724 | None:intergenic | 35.0% |
| TCACCAAGTTAGAAATCTGA+AGG | - | chr8_3:39412704-39412723 | Msa1287800:intron | 35.0% | |
| TCACCTTCAGATTTCTAACT+TGG | + | chr8_3:39412710-39412729 | None:intergenic | 35.0% | |
| AAGGGCAGAAAGAACAAAAA+GGG | + | chr8_3:39412761-39412780 | None:intergenic | 35.0% | |
| AAAGGGCAGAAAGAACAAAA+AGG | + | chr8_3:39412762-39412781 | None:intergenic | 35.0% | |
| TGTAAACACATCATCACGAA+TGG | + | chr8_3:39413053-39413072 | None:intergenic | 35.0% | |
| AAATTCAAGCGACCAAGAAA+CGG | + | chr8_3:39413257-39413276 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | + | chr8_3:39413643-39413662 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | - | chr8_3:39413697-39413716 | Msa1287800:intron | 35.0% | |
| !!! | CAGGACCAAAAATTTTGGTT+TGG | + | chr8_3:39413769-39413788 | None:intergenic | 35.0% |
| !!! | CAAACCAAAATTTTTGGTCC+TGG | - | chr8_3:39413767-39413786 | Msa1287800:intron | 35.0% |
| ! | TGACTTATAATTTAGGGCAG+AGG | - | chr8_3:39414113-39414132 | Msa1287800:CDS | 35.0% |
| ! | GACTTATAATTTAGGGCAGA+GGG | - | chr8_3:39414114-39414133 | Msa1287800:CDS | 35.0% |
| GAGGATTACATGACATATAG+AGG | + | chr8_3:39414152-39414171 | None:intergenic | 35.0% | |
| ! | ATGCAGATATCCACATTTTC+TGG | + | chr8_3:39414406-39414425 | None:intergenic | 35.0% |
| !! | GAGGGTCTTGTTAAAGATAA+TGG | - | chr8_3:39412205-39412224 | Msa1287800:CDS | 35.0% |
| !! | GGTCTTGTTAAAGATAATGG+AGG | - | chr8_3:39412208-39412227 | Msa1287800:CDS | 35.0% |
| AGCTTTCCTTTGATCTCAAA+AGG | + | chr8_3:39412235-39412254 | None:intergenic | 35.0% | |
| AAAGATACATCAGAAACAGC+TGG | - | chr8_3:39412283-39412302 | Msa1287800:intron | 35.0% | |
| ! | TTTTGAGCATAAGAAGAAGC+TGG | - | chr8_3:39412534-39412553 | Msa1287800:intron | 35.0% |
| AGTTTCTGCTCAAAAGTCAA+AGG | + | chr8_3:39412651-39412670 | None:intergenic | 35.0% | |
| ! | TTGACTTTTGAGCAGAAACT+TGG | - | chr8_3:39412651-39412670 | Msa1287800:intron | 35.0% |
| ! | TCAGATTTCTAACTTGGTGA+GGG | + | chr8_3:39412704-39412723 | None:intergenic | 35.0% |
| ! | TTCAGATTTCTAACTTGGTG+AGG | + | chr8_3:39412705-39412724 | None:intergenic | 35.0% |
| TCACCAAGTTAGAAATCTGA+AGG | - | chr8_3:39412704-39412723 | Msa1287800:intron | 35.0% | |
| TCACCTTCAGATTTCTAACT+TGG | + | chr8_3:39412710-39412729 | None:intergenic | 35.0% | |
| AAGGGCAGAAAGAACAAAAA+GGG | + | chr8_3:39412761-39412780 | None:intergenic | 35.0% | |
| AAAGGGCAGAAAGAACAAAA+AGG | + | chr8_3:39412762-39412781 | None:intergenic | 35.0% | |
| TGTAAACACATCATCACGAA+TGG | + | chr8_3:39413053-39413072 | None:intergenic | 35.0% | |
| AAATTCAAGCGACCAAGAAA+CGG | + | chr8_3:39413257-39413276 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | + | chr8_3:39413643-39413662 | None:intergenic | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | - | chr8_3:39413697-39413716 | Msa1287800:intron | 35.0% | |
| !!! | CAGGACCAAAAATTTTGGTT+TGG | + | chr8_3:39413769-39413788 | None:intergenic | 35.0% |
| !!! | CAAACCAAAATTTTTGGTCC+TGG | - | chr8_3:39413767-39413786 | Msa1287800:intron | 35.0% |
| ! | TGACTTATAATTTAGGGCAG+AGG | - | chr8_3:39414113-39414132 | Msa1287800:CDS | 35.0% |
| ! | GACTTATAATTTAGGGCAGA+GGG | - | chr8_3:39414114-39414133 | Msa1287800:CDS | 35.0% |
| GAGGATTACATGACATATAG+AGG | + | chr8_3:39414152-39414171 | None:intergenic | 35.0% | |
| ! | ATGCAGATATCCACATTTTC+TGG | + | chr8_3:39414406-39414425 | None:intergenic | 35.0% |
| GAAGCAGTATTTATACCTGC+TGG | - | chr8_3:39412675-39412694 | Msa1287800:intron | 40.0% | |
| ACAGATCAGAAGAAACTGTG+AGG | + | chr8_3:39413013-39413032 | None:intergenic | 40.0% | |
| !! | ACACTCTTTGGTTTGTTGCT+AGG | - | chr8_3:39413168-39413187 | Msa1287800:intron | 40.0% |
| !! | CACTCTTTGGTTTGTTGCTA+GGG | - | chr8_3:39413169-39413188 | Msa1287800:intron | 40.0% |
| CAAACCAAAATTCTTGGTCC+TGG | + | chr8_3:39413637-39413656 | None:intergenic | 40.0% | |
| !!! | CAGGACCAAGAATTTTGGTT+TGG | - | chr8_3:39413635-39413654 | Msa1287800:intron | 40.0% |
| ! | TGGACCAGGACCAAAAATTT+TGG | + | chr8_3:39413774-39413793 | None:intergenic | 40.0% |
| GAAGCAGTATTTATACCTGC+TGG | - | chr8_3:39412675-39412694 | Msa1287800:intron | 40.0% | |
| ACAGATCAGAAGAAACTGTG+AGG | + | chr8_3:39413013-39413032 | None:intergenic | 40.0% | |
| !! | ACACTCTTTGGTTTGTTGCT+AGG | - | chr8_3:39413168-39413187 | Msa1287800:intron | 40.0% |
| !! | CACTCTTTGGTTTGTTGCTA+GGG | - | chr8_3:39413169-39413188 | Msa1287800:intron | 40.0% |
| CAAACCAAAATTCTTGGTCC+TGG | + | chr8_3:39413637-39413656 | None:intergenic | 40.0% | |
| !!! | CAGGACCAAGAATTTTGGTT+TGG | - | chr8_3:39413635-39413654 | Msa1287800:intron | 40.0% |
| ! | TGGACCAGGACCAAAAATTT+TGG | + | chr8_3:39413774-39413793 | None:intergenic | 40.0% |
| !!! | GGAGGTCCTTTTGAGATCAA+AGG | - | chr8_3:39412226-39412245 | Msa1287800:CDS | 45.0% |
| AGAAACAGCTGGTGCACTTT+GGG | - | chr8_3:39412294-39412313 | Msa1287800:intron | 45.0% | |
| TGAGCATAAGAAGAAGCTGG+AGG | - | chr8_3:39412537-39412556 | Msa1287800:intron | 45.0% | |
| AAGAAGCTGGAGGCAGAATT+TGG | - | chr8_3:39412547-39412566 | Msa1287800:intron | 45.0% | |
| TTGTTGCCTTGTCTCATGTG+AGG | - | chr8_3:39412841-39412860 | Msa1287800:intron | 45.0% | |
| TGTTGCCTTGTCTCATGTGA+GGG | - | chr8_3:39412842-39412861 | Msa1287800:intron | 45.0% | |
| CATCACGAATGGTAGCATGA+GGG | + | chr8_3:39413042-39413061 | None:intergenic | 45.0% | |
| TCATCACGAATGGTAGCATG+AGG | + | chr8_3:39413043-39413062 | None:intergenic | 45.0% | |
| TGCATAGCCCTGTACTTGTA+TGG | - | chr8_3:39413229-39413248 | Msa1287800:intron | 45.0% | |
| GCATAGCCCTGTACTTGTAT+GGG | - | chr8_3:39413230-39413249 | Msa1287800:intron | 45.0% | |
| CATAGCCCTGTACTTGTATG+GGG | - | chr8_3:39413231-39413250 | Msa1287800:intron | 45.0% | |
| GAGGAAGAGAAACACTTGTG+TGG | - | chr8_3:39413610-39413629 | Msa1287800:intron | 45.0% | |
| ! | TGGACCAGGACCAAGAATTT+TGG | - | chr8_3:39413630-39413649 | Msa1287800:intron | 45.0% |
| GAGAGAAGAGAAGAGAGAGA+AGG | - | chr8_3:39413724-39413743 | Msa1287800:intron | 45.0% | |
| GAGAAAATCTTGTGTGGACC+AGG | + | chr8_3:39413788-39413807 | None:intergenic | 45.0% | |
| CTTCGTGTCACCAGAAAATG+TGG | - | chr8_3:39414393-39414412 | Msa1287800:CDS | 45.0% | |
| !!! | GGAGGTCCTTTTGAGATCAA+AGG | - | chr8_3:39412226-39412245 | Msa1287800:CDS | 45.0% |
| AGAAACAGCTGGTGCACTTT+GGG | - | chr8_3:39412294-39412313 | Msa1287800:intron | 45.0% | |
| TGAGCATAAGAAGAAGCTGG+AGG | - | chr8_3:39412537-39412556 | Msa1287800:intron | 45.0% | |
| AAGAAGCTGGAGGCAGAATT+TGG | - | chr8_3:39412547-39412566 | Msa1287800:intron | 45.0% | |
| TTGTTGCCTTGTCTCATGTG+AGG | - | chr8_3:39412841-39412860 | Msa1287800:intron | 45.0% | |
| TGTTGCCTTGTCTCATGTGA+GGG | - | chr8_3:39412842-39412861 | Msa1287800:intron | 45.0% | |
| CATCACGAATGGTAGCATGA+GGG | + | chr8_3:39413042-39413061 | None:intergenic | 45.0% | |
| TCATCACGAATGGTAGCATG+AGG | + | chr8_3:39413043-39413062 | None:intergenic | 45.0% | |
| TGCATAGCCCTGTACTTGTA+TGG | - | chr8_3:39413229-39413248 | Msa1287800:intron | 45.0% | |
| GCATAGCCCTGTACTTGTAT+GGG | - | chr8_3:39413230-39413249 | Msa1287800:intron | 45.0% | |
| CATAGCCCTGTACTTGTATG+GGG | - | chr8_3:39413231-39413250 | Msa1287800:intron | 45.0% | |
| GAGGAAGAGAAACACTTGTG+TGG | - | chr8_3:39413610-39413629 | Msa1287800:intron | 45.0% | |
| ! | TGGACCAGGACCAAGAATTT+TGG | - | chr8_3:39413630-39413649 | Msa1287800:intron | 45.0% |
| GAGAGAAGAGAAGAGAGAGA+AGG | - | chr8_3:39413724-39413743 | Msa1287800:intron | 45.0% | |
| GAGAAAATCTTGTGTGGACC+AGG | + | chr8_3:39413788-39413807 | None:intergenic | 45.0% | |
| CTTCGTGTCACCAGAAAATG+TGG | - | chr8_3:39414393-39414412 | Msa1287800:CDS | 45.0% | |
| CAGAAACAGCTGGTGCACTT+TGG | - | chr8_3:39412293-39412312 | Msa1287800:intron | 50.0% | |
| TGGTTCCCTCACATGAGACA+AGG | + | chr8_3:39412850-39412869 | None:intergenic | 50.0% | |
| TTGCTAGGGACGTCTTGTGT+GGG | - | chr8_3:39413183-39413202 | Msa1287800:intron | 50.0% | |
| AACGGCCCCATACAAGTACA+GGG | + | chr8_3:39413239-39413258 | None:intergenic | 50.0% | |
| AAACGGCCCCATACAAGTAC+AGG | + | chr8_3:39413240-39413259 | None:intergenic | 50.0% | |
| ACTTGTATGGGGCCGTTTCT+TGG | - | chr8_3:39413242-39413261 | Msa1287800:intron | 50.0% | |
| ! | CAAGAGCACAAGAAATGCCC+AGG | + | chr8_3:39413309-39413328 | None:intergenic | 50.0% |
| GAGAAACACTTGTGTGGACC+AGG | - | chr8_3:39413616-39413635 | Msa1287800:intron | 50.0% | |
| CAGAAACAGCTGGTGCACTT+TGG | - | chr8_3:39412293-39412312 | Msa1287800:intron | 50.0% | |
| TGGTTCCCTCACATGAGACA+AGG | + | chr8_3:39412850-39412869 | None:intergenic | 50.0% | |
| TTGCTAGGGACGTCTTGTGT+GGG | - | chr8_3:39413183-39413202 | Msa1287800:intron | 50.0% | |
| AACGGCCCCATACAAGTACA+GGG | + | chr8_3:39413239-39413258 | None:intergenic | 50.0% | |
| AAACGGCCCCATACAAGTAC+AGG | + | chr8_3:39413240-39413259 | None:intergenic | 50.0% | |
| ACTTGTATGGGGCCGTTTCT+TGG | - | chr8_3:39413242-39413261 | Msa1287800:intron | 50.0% | |
| ! | CAAGAGCACAAGAAATGCCC+AGG | + | chr8_3:39413309-39413328 | None:intergenic | 50.0% |
| GAGAAACACTTGTGTGGACC+AGG | - | chr8_3:39413616-39413635 | Msa1287800:intron | 50.0% | |
| GTTGCTAGGGACGTCTTGTG+TGG | - | chr8_3:39413182-39413201 | Msa1287800:intron | 55.0% | |
| GTTGCTAGGGACGTCTTGTG+TGG | - | chr8_3:39413182-39413201 | Msa1287800:intron | 55.0% | |
| !! | ACTTGGTGAGGGCATCCAGC+AGG | + | chr8_3:39412693-39412712 | None:intergenic | 60.0% |
| !! | ACTTGGTGAGGGCATCCAGC+AGG | + | chr8_3:39412693-39412712 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 39412199 | 39414468 | 39412199 | ID=Msa1287800;Name=Msa1287800 |
| chr8_3 | mRNA | 39412199 | 39414468 | 39412199 | ID=Msa1287800-mRNA-1;Parent=Msa1287800;Name=Msa1287800-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|4|0|156 |
| chr8_3 | exon | 39414256 | 39414468 | 39414256 | ID=Msa1287800-mRNA-1:exon:11023;Parent=Msa1287800-mRNA-1 |
| chr8_3 | exon | 39414099 | 39414171 | 39414099 | ID=Msa1287800-mRNA-1:exon:11022;Parent=Msa1287800-mRNA-1 |
| chr8_3 | exon | 39413942 | 39414027 | 39413942 | ID=Msa1287800-mRNA-1:exon:11021;Parent=Msa1287800-mRNA-1 |
| chr8_3 | exon | 39412199 | 39412297 | 39412199 | ID=Msa1287800-mRNA-1:exon:11020;Parent=Msa1287800-mRNA-1 |
| chr8_3 | CDS | 39414256 | 39414468 | 39414256 | ID=Msa1287800-mRNA-1:cds;Parent=Msa1287800-mRNA-1 |
| chr8_3 | CDS | 39414099 | 39414171 | 39414099 | ID=Msa1287800-mRNA-1:cds;Parent=Msa1287800-mRNA-1 |
| chr8_3 | CDS | 39413942 | 39414027 | 39413942 | ID=Msa1287800-mRNA-1:cds;Parent=Msa1287800-mRNA-1 |
| chr8_3 | CDS | 39412199 | 39412297 | 39412199 | ID=Msa1287800-mRNA-1:cds;Parent=Msa1287800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
