Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121200 | AES80484.1 | 38.889 | 108 | 65 | 1 | 5 | 111 | 1 | 108 | 8.11e-17 | 81.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121200 | G7KTB6 | 38.889 | 108 | 65 | 1 | 5 | 111 | 1 | 108 | 3.88e-17 | 81.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa1121200 | 0.820109 | 8.161017e-53 | -8.615850e-47 |
| Msa0013750 | Msa1121200 | 0.852481 | 4.488859e-61 | -8.615850e-47 |
| Msa0015750 | Msa1121200 | 0.832234 | 1.062185e-55 | -8.615850e-47 |
| Msa0016570 | Msa1121200 | 0.849551 | 3.006452e-60 | -8.615850e-47 |
| Msa0016580 | Msa1121200 | 0.830494 | 2.845415e-55 | -8.615850e-47 |
| Msa0056530 | Msa1121200 | 0.827058 | 1.929715e-54 | -8.615850e-47 |
| Msa0092630 | Msa1121200 | 0.815390 | 9.474619e-52 | -8.615850e-47 |
| Msa0095970 | Msa1121200 | 0.816196 | 6.265296e-52 | -8.615850e-47 |
| Msa0102070 | Msa1121200 | 0.882216 | 1.254293e-70 | -8.615850e-47 |
| Msa0107580 | Msa1121200 | 0.820532 | 6.525440e-53 | -8.615850e-47 |
| Msa0110270 | Msa1121200 | 0.819378 | 1.198838e-52 | -8.615850e-47 |
| Msa0111510 | Msa1121200 | 0.816547 | 5.228262e-52 | -8.615850e-47 |
| Msa0604350 | Msa1121200 | 0.828655 | 7.966406e-55 | -8.615850e-47 |
| Msa0636170 | Msa1121200 | 0.844871 | 5.777858e-59 | -8.615850e-47 |
| Msa0639610 | Msa1121200 | 0.847694 | 9.834224e-60 | -8.615850e-47 |
| Msa0661230 | Msa1121200 | 0.807081 | 6.015085e-50 | -8.615850e-47 |
| Msa0678930 | Msa1121200 | 0.854665 | 1.058263e-61 | -8.615850e-47 |
| Msa0694370 | Msa1121200 | 0.838161 | 3.388983e-57 | -8.615850e-47 |
| Msa0725850 | Msa1121200 | 0.816078 | 6.655738e-52 | -8.615850e-47 |
| Msa0726140 | Msa1121200 | 0.897124 | 1.905112e-76 | -8.615850e-47 |
| Msa0729800 | Msa1121200 | 0.883959 | 2.884001e-71 | -8.615850e-47 |
| Msa0731560 | Msa1121200 | 0.829086 | 6.265732e-55 | -8.615850e-47 |
| Msa0731940 | Msa1121200 | 0.805851 | 1.093233e-49 | -8.615850e-47 |
| Msa0732310 | Msa1121200 | 0.826642 | 2.425270e-54 | -8.615850e-47 |
| Msa0733290 | Msa1121200 | 0.862571 | 4.611256e-64 | -8.615850e-47 |
| Msa0743810 | Msa1121200 | 0.892357 | 1.710955e-74 | -8.615850e-47 |
| Msa0745060 | Msa1121200 | 0.894887 | 1.614469e-75 | -8.615850e-47 |
| Msa0767720 | Msa1121200 | 0.862392 | 5.234624e-64 | -8.615850e-47 |
| Msa0768370 | Msa1121200 | 0.814137 | 1.795868e-51 | -8.615850e-47 |
| Msa0777870 | Msa1121200 | 0.846740 | 1.795881e-59 | -8.615850e-47 |
| Msa0783160 | Msa1121200 | 0.896665 | 2.967161e-76 | -8.615850e-47 |
| Msa0784290 | Msa1121200 | 0.843362 | 1.467948e-58 | -8.615850e-47 |
| Msa0784300 | Msa1121200 | 0.846877 | 1.648153e-59 | -8.615850e-47 |
| Msa0787600 | Msa1121200 | 0.876100 | 1.826029e-68 | -8.615850e-47 |
| Msa0808010 | Msa1121200 | 0.892588 | 1.382705e-74 | -8.615850e-47 |
| Msa0808020 | Msa1121200 | 0.886359 | 3.664140e-72 | -8.615850e-47 |
| Msa0811080 | Msa1121200 | 0.834426 | 3.017895e-56 | -8.615850e-47 |
| Msa0811270 | Msa1121200 | 0.818089 | 2.351376e-52 | -8.615850e-47 |
| Msa0825860 | Msa1121200 | 0.903638 | 2.821472e-79 | -8.615850e-47 |
| Msa0833290 | Msa1121200 | 0.875211 | 3.683730e-68 | -8.615850e-47 |
| Msa0833300 | Msa1121200 | 0.859865 | 3.077688e-63 | -8.615850e-47 |
| Msa0124100 | Msa1121200 | 0.818652 | 1.752554e-52 | -8.615850e-47 |
| Msa0124150 | Msa1121200 | 0.805097 | 1.573114e-49 | -8.615850e-47 |
| Msa0131770 | Msa1121200 | 0.801750 | 7.771101e-49 | -8.615850e-47 |
| Msa0142220 | Msa1121200 | 0.867036 | 1.840207e-65 | -8.615850e-47 |
| Msa0145750 | Msa1121200 | 0.875985 | 2.000986e-68 | -8.615850e-47 |
| Msa0153910 | Msa1121200 | 0.856605 | 2.872671e-62 | -8.615850e-47 |
| Msa0197010 | Msa1121200 | 0.817570 | 3.078964e-52 | -8.615850e-47 |
| Msa0200000 | Msa1121200 | 0.859567 | 3.783682e-63 | -8.615850e-47 |
| Msa0208090 | Msa1121200 | 0.804530 | 2.066698e-49 | -8.615850e-47 |
| Msa0214380 | Msa1121200 | 0.801564 | 8.483616e-49 | -8.615850e-47 |
| Msa0227480 | Msa1121200 | 0.883301 | 5.037616e-71 | -8.615850e-47 |
| Msa0231000 | Msa1121200 | 0.814752 | 1.312461e-51 | -8.615850e-47 |
| Msa0232850 | Msa1121200 | 0.855320 | 6.827941e-62 | -8.615850e-47 |
| Msa0235140 | Msa1121200 | 0.817983 | 2.484163e-52 | -8.615850e-47 |
| Msa0364340 | Msa1121200 | 0.808703 | 2.718297e-50 | -8.615850e-47 |
| Msa0365500 | Msa1121200 | 0.846133 | 2.630645e-59 | -8.615850e-47 |
| Msa0366420 | Msa1121200 | 0.830550 | 2.757168e-55 | -8.615850e-47 |
| Msa0366580 | Msa1121200 | 0.817698 | 2.880677e-52 | -8.615850e-47 |
| Msa0369730 | Msa1121200 | 0.809034 | 2.309532e-50 | -8.615850e-47 |
| Msa0375870 | Msa1121200 | 0.802266 | 6.087375e-49 | -8.615850e-47 |
| Msa0378360 | Msa1121200 | 0.801558 | 8.509115e-49 | -8.615850e-47 |
| Msa0379940 | Msa1121200 | 0.807013 | 6.219492e-50 | -8.615850e-47 |
| Msa0384800 | Msa1121200 | 0.858807 | 6.394199e-63 | -8.615850e-47 |
| Msa0384890 | Msa1121200 | 0.836246 | 1.047383e-56 | -8.615850e-47 |
| Msa0390070 | Msa1121200 | 0.833380 | 5.514766e-56 | -8.615850e-47 |
| Msa0394970 | Msa1121200 | 0.809155 | 2.175440e-50 | -8.615850e-47 |
| Msa0406120 | Msa1121200 | 0.870764 | 1.140746e-66 | -8.615850e-47 |
| Msa0406280 | Msa1121200 | 0.800738 | 1.251879e-48 | -8.615850e-47 |
| Msa0407750 | Msa1121200 | 0.847345 | 1.226074e-59 | -8.615850e-47 |
| Msa0414410 | Msa1121200 | 0.912228 | 2.476004e-83 | -8.615850e-47 |
| Msa0414420 | Msa1121200 | 0.913769 | 4.186963e-84 | -8.615850e-47 |
| Msa0428000 | Msa1121200 | 0.807601 | 4.668641e-50 | -8.615850e-47 |
| Msa0428010 | Msa1121200 | 0.828876 | 7.045134e-55 | -8.615850e-47 |
| Msa0435230 | Msa1121200 | 0.817289 | 3.562292e-52 | -8.615850e-47 |
| Msa0436780 | Msa1121200 | 0.862411 | 5.163943e-64 | -8.615850e-47 |
| Msa0436800 | Msa1121200 | 0.848601 | 5.524233e-60 | -8.615850e-47 |
| Msa0438620 | Msa1121200 | 0.864648 | 1.045422e-64 | -8.615850e-47 |
| Msa0450000 | Msa1121200 | 0.886360 | 3.659586e-72 | -8.615850e-47 |
| Msa0450570 | Msa1121200 | 0.858062 | 1.065793e-62 | -8.615850e-47 |
| Msa0451730 | Msa1121200 | 0.824095 | 9.719667e-54 | -8.615850e-47 |
| Msa0452900 | Msa1121200 | 0.920301 | 1.521701e-87 | -8.615850e-47 |
| Msa0452910 | Msa1121200 | 0.802071 | 6.676538e-49 | -8.615850e-47 |
| Msa0453120 | Msa1121200 | 0.873003 | 2.059010e-67 | -8.615850e-47 |
| Msa0454370 | Msa1121200 | 0.810947 | 8.948257e-51 | -8.615850e-47 |
| Msa0454910 | Msa1121200 | 0.839859 | 1.231295e-57 | -8.615850e-47 |
| Msa0459160 | Msa1121200 | 0.877102 | 8.225829e-69 | -8.615850e-47 |
| Msa0459170 | Msa1121200 | 0.855649 | 5.473632e-62 | -8.615850e-47 |
| Msa0479340 | Msa1121200 | 0.814220 | 1.721052e-51 | -8.615850e-47 |
| Msa0979850 | Msa1121200 | 0.837165 | 6.105761e-57 | -8.615850e-47 |
| Msa0980200 | Msa1121200 | 0.806534 | 7.851338e-50 | -8.615850e-47 |
| Msa0981270 | Msa1121200 | 0.817970 | 2.501460e-52 | -8.615850e-47 |
| Msa0981370 | Msa1121200 | 0.929502 | 6.336031e-93 | -8.615850e-47 |
| Msa0989060 | Msa1121200 | 0.846218 | 2.492803e-59 | -8.615850e-47 |
| Msa1016280 | Msa1121200 | 0.918308 | 1.829547e-86 | -8.615850e-47 |
| Msa1023010 | Msa1121200 | 0.822496 | 2.296466e-53 | -8.615850e-47 |
| Msa1023050 | Msa1121200 | 0.824356 | 8.437702e-54 | -8.615850e-47 |
| Msa1024240 | Msa1121200 | 0.865946 | 4.083052e-65 | -8.615850e-47 |
| Msa1025360 | Msa1121200 | 0.916271 | 2.176215e-85 | -8.615850e-47 |
| Msa1025370 | Msa1121200 | 0.908646 | 1.362290e-81 | -8.615850e-47 |
| Msa1028230 | Msa1121200 | 0.811171 | 8.000089e-51 | -8.615850e-47 |
| Msa1030060 | Msa1121200 | 0.807339 | 5.304343e-50 | -8.615850e-47 |
| Msa1037200 | Msa1121200 | 0.827051 | 1.936790e-54 | -8.615850e-47 |
| Msa1044830 | Msa1121200 | 0.909778 | 3.907861e-82 | -8.615850e-47 |
| Msa1044840 | Msa1121200 | 0.918341 | 1.755316e-86 | -8.615850e-47 |
| Msa1060840 | Msa1121200 | 0.842900 | 1.949224e-58 | -8.615850e-47 |
| Msa1077460 | Msa1121200 | 0.823033 | 1.722302e-53 | -8.615850e-47 |
| Msa1092990 | Msa1121200 | 0.878215 | 3.363378e-69 | -8.615850e-47 |
| Msa1096580 | Msa1121200 | 0.820847 | 5.525538e-53 | -8.615850e-47 |
| Msa1099970 | Msa1121200 | 0.817960 | 2.514555e-52 | -8.615850e-47 |
| Msa1100980 | Msa1121200 | 0.900379 | 7.768047e-78 | -8.615850e-47 |
| Msa0247260 | Msa1121200 | 0.806450 | 8.176608e-50 | -8.615850e-47 |
| Msa0267000 | Msa1121200 | 0.904215 | 1.549474e-79 | -8.615850e-47 |
| Msa0267010 | Msa1121200 | 0.911873 | 3.712013e-83 | -8.615850e-47 |
| Msa0270520 | Msa1121200 | 0.822557 | 2.222896e-53 | -8.615850e-47 |
| Msa0285810 | Msa1121200 | 0.833885 | 4.122864e-56 | -8.615850e-47 |
| Msa0290870 | Msa1121200 | 0.848131 | 7.451885e-60 | -8.615850e-47 |
| Msa0304170 | Msa1121200 | 0.819949 | 8.877228e-53 | -8.615850e-47 |
| Msa0306460 | Msa1121200 | 0.812418 | 4.282049e-51 | -8.615850e-47 |
| Msa0313760 | Msa1121200 | 0.829434 | 5.158661e-55 | -8.615850e-47 |
| Msa0342240 | Msa1121200 | 0.895742 | 7.176539e-76 | -8.615850e-47 |
| Msa0360510 | Msa1121200 | 0.879009 | 1.768013e-69 | -8.615850e-47 |
| Msa0363300 | Msa1121200 | 0.821183 | 4.623727e-53 | -8.615850e-47 |
| Msa1109440 | Msa1121200 | 0.887226 | 1.718788e-72 | -8.615850e-47 |
| Msa1112300 | Msa1121200 | 0.832263 | 1.044187e-55 | -8.615850e-47 |
| Msa1117150 | Msa1121200 | 0.820013 | 8.584915e-53 | -8.615850e-47 |
| Msa1121200 | Msa1121480 | 0.837839 | 4.100892e-57 | -8.615850e-47 |
| Msa1121200 | Msa1121490 | 0.835959 | 1.238242e-56 | -8.615850e-47 |
| Msa1121200 | Msa1123420 | 0.807339 | 5.304201e-50 | -8.615850e-47 |
| Msa1121200 | Msa1135740 | 0.891569 | 3.524854e-74 | -8.615850e-47 |
| Msa1121200 | Msa1136090 | 0.821831 | 3.275656e-53 | -8.615850e-47 |
| Msa1121200 | Msa1146100 | 0.820246 | 7.592589e-53 | -8.615850e-47 |
| Msa1121200 | Msa1146110 | 0.869294 | 3.449030e-66 | -8.615850e-47 |
| Msa1121200 | Msa1149360 | 0.853629 | 2.106084e-61 | -8.615850e-47 |
| Msa1121200 | Msa1150370 | 0.852948 | 3.301765e-61 | -8.615850e-47 |
| Msa1121200 | Msa1150640 | 0.800390 | 1.474252e-48 | -8.615850e-47 |
| Msa1121200 | Msa1164120 | 0.831345 | 1.759762e-55 | -8.615850e-47 |
| Msa1121200 | Msa1173920 | 0.822509 | 2.280386e-53 | -8.615850e-47 |
| Msa1121200 | Msa1178340 | 0.808563 | 2.912550e-50 | -8.615850e-47 |
| Msa1121200 | Msa1184420 | 0.815215 | 1.036026e-51 | -8.615850e-47 |
| Msa1121200 | Msa1187940 | 0.872203 | 3.809641e-67 | -8.615850e-47 |
| Msa1121200 | Msa1187950 | 0.874385 | 7.039764e-68 | -8.615850e-47 |
| Msa1121200 | Msa1192640 | 0.893324 | 6.988287e-75 | -8.615850e-47 |
| Msa1121200 | Msa1193730 | 0.840414 | 8.820194e-58 | -8.615850e-47 |
| Msa1121200 | Msa1230430 | 0.810547 | 1.091968e-50 | -8.615850e-47 |
| Msa1121200 | Msa1241010 | 0.800201 | 1.610781e-48 | -8.615850e-47 |
| Msa1121200 | Msa1246880 | 0.849679 | 2.770211e-60 | -8.615850e-47 |
| Msa1121200 | Msa1248300 | 0.809475 | 1.858189e-50 | -8.615850e-47 |
| Msa1121200 | Msa1248310 | 0.819470 | 1.141985e-52 | -8.615850e-47 |
| Msa1121200 | Msa1248370 | 0.817396 | 3.370860e-52 | -8.615850e-47 |
| Msa1121200 | Msa1253000 | 0.808044 | 3.758532e-50 | -8.615850e-47 |
| Msa1121200 | Msa1260100 | 0.824014 | 1.015481e-53 | -8.615850e-47 |
| Msa1121200 | Msa1269670 | 0.893280 | 7.279634e-75 | -8.615850e-47 |
| Msa1121200 | Msa1270230 | 0.896278 | 4.300910e-76 | -8.615850e-47 |
| Msa1121200 | Msa1270240 | 0.887784 | 1.052599e-72 | -8.615850e-47 |
| Msa1121200 | Msa1270270 | 0.874802 | 5.078066e-68 | -8.615850e-47 |
| Msa1121200 | Msa1283330 | 0.896234 | 4.484598e-76 | -8.615850e-47 |
| Msa1121200 | Msa1285930 | 0.899575 | 1.729792e-77 | -8.615850e-47 |
| Msa1121200 | Msa1287800 | 0.909360 | 6.208281e-82 | -8.615850e-47 |
| Msa1121200 | Msa1287810 | 0.915460 | 5.731969e-85 | -8.615850e-47 |
| Msa1121200 | Msa1287820 | 0.800839 | 1.193769e-48 | -8.615850e-47 |
| Msa1121200 | Msa1287830 | 0.828354 | 9.422166e-55 | -8.615850e-47 |
| Msa1121200 | Msa1288560 | 0.828109 | 1.078913e-54 | -8.615850e-47 |
| Msa1121200 | Msa1289420 | 0.846538 | 2.039905e-59 | -8.615850e-47 |
| Msa1121200 | Msa1289430 | 0.878684 | 2.300379e-69 | -8.615850e-47 |
| Msa1121200 | Msa1297210 | 0.822796 | 1.955868e-53 | -8.615850e-47 |
| Msa1121200 | Msa1305480 | 0.829081 | 6.284383e-55 | -8.615850e-47 |
| Msa1121200 | Msa1307890 | 0.888576 | 5.221937e-73 | -8.615850e-47 |
| Msa1121200 | Msa1310120 | 0.810961 | 8.885558e-51 | -8.615850e-47 |
| Msa1121200 | Msa1313980 | 0.842441 | 2.580852e-58 | -8.615850e-47 |
| Msa1121200 | Msa1314280 | 0.808470 | 3.048621e-50 | -8.615850e-47 |
| Msa1121200 | Msa1320300 | 0.873433 | 1.476129e-67 | -8.615850e-47 |
| Msa1121200 | Msa1321560 | 0.828642 | 8.024121e-55 | -8.615850e-47 |
| Msa1121200 | Msa1340590 | 0.882013 | 1.486072e-70 | -8.615850e-47 |
| Msa1121200 | Msa1342200 | 0.829257 | 5.696985e-55 | -8.615850e-47 |
| Msa1121200 | Msa1344520 | 0.810559 | 1.085422e-50 | -8.615850e-47 |
| Msa1121200 | Msa1345660 | 0.805110 | 1.563466e-49 | -8.615850e-47 |
| Msa1121200 | Msa1369430 | 0.814457 | 1.526166e-51 | -8.615850e-47 |
| Msa1121200 | Msa1382690 | 0.831526 | 1.587809e-55 | -8.615850e-47 |
| Msa1121200 | Msa1382700 | 0.844576 | 6.941322e-59 | -8.615850e-47 |
| Msa1121200 | Msa1386330 | 0.810755 | 9.844090e-51 | -8.615850e-47 |
| Msa1121200 | Msa1397150 | 0.815026 | 1.141425e-51 | -8.615850e-47 |
| Msa1121200 | Msa1397580 | 0.876491 | 1.339059e-68 | -8.615850e-47 |
| Msa1121200 | Msa1402790 | 0.814192 | 1.745707e-51 | -8.615850e-47 |
| Msa1121200 | Msa1404000 | 0.887462 | 1.397273e-72 | -8.615850e-47 |
| Msa1121200 | Msa1404020 | 0.812322 | 4.494734e-51 | -8.615850e-47 |
| Msa1121200 | Msa1408780 | 0.832197 | 1.084514e-55 | -8.615850e-47 |
| Msa1121200 | Msa1410680 | 0.804444 | 2.153916e-49 | -8.615850e-47 |
| Msa1121200 | Msa1415310 | 0.882513 | 9.782054e-71 | -8.615850e-47 |
| Msa1121200 | Msa1422180 | 0.877266 | 7.213986e-69 | -8.615850e-47 |
| Msa1121200 | Msa1433120 | 0.921672 | 2.647813e-88 | -8.615850e-47 |
| Msa1121200 | Msa1451570 | 0.821669 | 3.571590e-53 | -8.615850e-47 |
| Msa0485030 | Msa1121200 | 0.817896 | 2.600106e-52 | -8.615850e-47 |
| Msa0491590 | Msa1121200 | 0.887685 | 1.148222e-72 | -8.615850e-47 |
| Msa0502760 | Msa1121200 | 0.809744 | 1.626556e-50 | -8.615850e-47 |
| Msa0506190 | Msa1121200 | 0.806833 | 6.788170e-50 | -8.615850e-47 |
| Msa0506270 | Msa1121200 | 0.856595 | 2.892480e-62 | -8.615850e-47 |
| Msa0518540 | Msa1121200 | 0.808105 | 3.647277e-50 | -8.615850e-47 |
| Msa0534540 | Msa1121200 | 0.856614 | 2.856262e-62 | -8.615850e-47 |
| Msa0542450 | Msa1121200 | 0.811462 | 6.917376e-51 | -8.615850e-47 |
| Msa0564890 | Msa1121200 | 0.881620 | 2.063161e-70 | -8.615850e-47 |
| Msa0590780 | Msa1121200 | 0.804352 | 2.250838e-49 | -8.615850e-47 |
| Msa0596150 | Msa1121200 | 0.847076 | 1.453590e-59 | -8.615850e-47 |
| Msa0598780 | Msa1121200 | 0.800742 | 1.249740e-48 | -8.615850e-47 |
| Msa0600700 | Msa1121200 | 0.824167 | 9.346578e-54 | -8.615850e-47 |
| Msa0844490 | Msa1121200 | 0.827650 | 1.391346e-54 | -8.615850e-47 |
| Msa0845930 | Msa1121200 | 0.802443 | 5.595587e-49 | -8.615850e-47 |
| Msa0846210 | Msa1121200 | 0.824660 | 7.156108e-54 | -8.615850e-47 |
| Msa0846330 | Msa1121200 | 0.890052 | 1.395243e-73 | -8.615850e-47 |
| Msa0846350 | Msa1121200 | 0.892802 | 1.134056e-74 | -8.615850e-47 |
| Msa0848960 | Msa1121200 | 0.867665 | 1.157907e-65 | -8.615850e-47 |
| Msa0854980 | Msa1121200 | 0.800097 | 1.690862e-48 | -8.615850e-47 |
| Msa0857680 | Msa1121200 | 0.800480 | 1.413031e-48 | -8.615850e-47 |
| Msa0858980 | Msa1121200 | 0.831686 | 1.450001e-55 | -8.615850e-47 |
| Msa0865320 | Msa1121200 | 0.881845 | 1.709780e-70 | -8.615850e-47 |
| Msa0872230 | Msa1121200 | 0.840093 | 1.069914e-57 | -8.615850e-47 |
| Msa0885280 | Msa1121200 | 0.822156 | 2.754114e-53 | -8.615850e-47 |
| Msa0885290 | Msa1121200 | 0.855740 | 5.151725e-62 | -8.615850e-47 |
| Msa0887920 | Msa1121200 | 0.807974 | 3.888410e-50 | -8.615850e-47 |
| Msa0888370 | Msa1121200 | 0.861667 | 8.734382e-64 | -8.615850e-47 |
| Msa0888420 | Msa1121200 | 0.857587 | 1.474215e-62 | -8.615850e-47 |
| Msa0895270 | Msa1121200 | 0.801781 | 7.659354e-49 | -8.615850e-47 |
| Msa0896080 | Msa1121200 | 0.850748 | 1.389165e-60 | -8.615850e-47 |
| Msa0899430 | Msa1121200 | 0.818246 | 2.166335e-52 | -8.615850e-47 |
| Msa0907260 | Msa1121200 | 0.812887 | 3.382054e-51 | -8.615850e-47 |
| Msa0914760 | Msa1121200 | 0.848024 | 7.974965e-60 | -8.615850e-47 |
| Msa0952350 | Msa1121200 | 0.810980 | 8.801845e-51 | -8.615850e-47 |
| Msa0952720 | Msa1121200 | 0.836873 | 7.247647e-57 | -8.615850e-47 |
| Msa0954020 | Msa1121200 | 0.820916 | 5.325796e-53 | -8.615850e-47 |
| Msa0954910 | Msa1121200 | 0.804444 | 2.153523e-49 | -8.615850e-47 |
| Msa0956270 | Msa1121200 | 0.827121 | 1.863822e-54 | -8.615850e-47 |
| Msa0957680 | Msa1121200 | 0.846549 | 2.025747e-59 | -8.615850e-47 |
| Msa0958550 | Msa1121200 | 0.823905 | 1.076823e-53 | -8.615850e-47 |
| Msa0966760 | Msa1121200 | 0.805083 | 1.584066e-49 | -8.615850e-47 |
| Msa0969260 | Msa1121200 | 0.806482 | 8.051846e-50 | -8.615850e-47 |
| Msa0979410 | Msa1121200 | 0.812796 | 3.540162e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGTTCTGCTTACATATT+TGG | 0.081581 | 7_3:+71287312 | Msa1121200:CDS |
| AAGCTATAGAACTTAACTTT+TGG | 0.253549 | 7_3:+71287166 | Msa1121200:CDS |
| TGCTTACATATTTGGATCAT+TGG | 0.288800 | 7_3:+71287320 | Msa1121200:CDS |
| CTGGCGATTACTGTTGAAAA+AGG | 0.307717 | 7_3:+71287458 | Msa1121200:CDS |
| AGCATTGCTTATTGCAATCT+TGG | 0.320492 | 7_3:+71287401 | Msa1121200:CDS |
| CAGGTACGTCCAACAAACTA+TGG | 0.362822 | 7_3:-71287211 | None:intergenic |
| GAAATTGACCGATTGAAACT+TGG | 0.376665 | 7_3:-71287368 | None:intergenic |
| GAAACTTGGGCTTTCATAGC+TGG | 0.377661 | 7_3:-71287354 | None:intergenic |
| GGTTGGAGACGACCGATGTT+AGG | 0.401331 | 7_3:+71287271 | Msa1121200:CDS |
| CTCCCTATGGATAGTATGGT+TGG | 0.445956 | 7_3:+71287254 | Msa1121200:CDS |
| TTTGCATCTACGCATTCATC+TGG | 0.452837 | 7_3:+71287439 | Msa1121200:CDS |
| AAAATGCACCAATGGTGAAC+AGG | 0.453002 | 7_3:-71287230 | None:intergenic |
| GGAAATCCAACTTTGATGTA+TGG | 0.463230 | 7_3:+71287126 | Msa1121200:CDS |
| TGGCTTTACCCATAGTTTGT+TGG | 0.463391 | 7_3:+71287202 | Msa1121200:CDS |
| AAATTGACCGATTGAAACTT+GGG | 0.469300 | 7_3:-71287367 | None:intergenic |
| ACCTTACCATACATCAAAGT+TGG | 0.472428 | 7_3:-71287132 | None:intergenic |
| TCAGTTACTATTACTACCGC+TGG | 0.521281 | 7_3:+71287104 | Msa1121200:CDS |
| TGGACGTACCTGTTCACCAT+TGG | 0.540194 | 7_3:+71287222 | Msa1121200:CDS |
| TCTCCAACCATACTATCCAT+AGG | 0.541270 | 7_3:-71287257 | None:intergenic |
| TCCAACTTTGATGTATGGTA+AGG | 0.542081 | 7_3:+71287131 | Msa1121200:CDS |
| ATGAAAGCCCAAGTTTCAAT+CGG | 0.552790 | 7_3:+71287360 | Msa1121200:CDS |
| CTCCAACCATACTATCCATA+GGG | 0.555613 | 7_3:-71287256 | None:intergenic |
| GGCTCGGTTGATGAGTGTTA+AGG | 0.561053 | 7_3:+71287053 | Msa1121200:CDS |
| CAATCATCAACGGAAAATCC+TGG | 0.564842 | 7_3:-71287481 | None:intergenic |
| AAGGAACTCAAAACATGGCT+CGG | 0.577596 | 7_3:+71287037 | None:intergenic |
| CAGTTACTATTACTACCGCT+GGG | 0.584102 | 7_3:+71287105 | Msa1121200:CDS |
| AGGTACGTCCAACAAACTAT+GGG | 0.597955 | 7_3:-71287210 | None:intergenic |
| ATGAATGCGTAGATGCAAAG+AGG | 0.637814 | 7_3:-71287435 | None:intergenic |
| ATCAAAGTTGGATTTCCCAG+CGG | 0.722200 | 7_3:-71287120 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGCTATAGAACTTAACTTT+TGG | + | chr7_3:71287166-71287185 | Msa1121200:CDS | 25.0% |
| !! | AGCTATAGAACTTAACTTTT+GGG | + | chr7_3:71287167-71287186 | Msa1121200:CDS | 25.0% |
| ! | TTATGTTCTGCTTACATATT+TGG | + | chr7_3:71287312-71287331 | Msa1121200:CDS | 25.0% |
| TGCTTACATATTTGGATCAT+TGG | + | chr7_3:71287320-71287339 | Msa1121200:CDS | 30.0% | |
| AAATTGACCGATTGAAACTT+GGG | - | chr7_3:71287370-71287389 | None:intergenic | 30.0% | |
| GGAAATCCAACTTTGATGTA+TGG | + | chr7_3:71287126-71287145 | Msa1121200:CDS | 35.0% | |
| TCCAACTTTGATGTATGGTA+AGG | + | chr7_3:71287131-71287150 | Msa1121200:CDS | 35.0% | |
| ACCTTACCATACATCAAAGT+TGG | - | chr7_3:71287135-71287154 | None:intergenic | 35.0% | |
| ! | TTTTCTCCCTATGGATAGTA+TGG | + | chr7_3:71287250-71287269 | Msa1121200:CDS | 35.0% |
| CATGAAAAAACGCCTAACAT+CGG | - | chr7_3:71287286-71287305 | None:intergenic | 35.0% | |
| ATGAAAGCCCAAGTTTCAAT+CGG | + | chr7_3:71287360-71287379 | Msa1121200:CDS | 35.0% | |
| GAAATTGACCGATTGAAACT+TGG | - | chr7_3:71287371-71287390 | None:intergenic | 35.0% | |
| AGCATTGCTTATTGCAATCT+TGG | + | chr7_3:71287401-71287420 | Msa1121200:CDS | 35.0% | |
| TCAGTTACTATTACTACCGC+TGG | + | chr7_3:71287104-71287123 | Msa1121200:CDS | 40.0% | |
| CAGTTACTATTACTACCGCT+GGG | + | chr7_3:71287105-71287124 | Msa1121200:CDS | 40.0% | |
| ATCAAAGTTGGATTTCCCAG+CGG | - | chr7_3:71287123-71287142 | None:intergenic | 40.0% | |
| !!! | CTTTTGGGAAGTGCTTTTAG+TGG | + | chr7_3:71287182-71287201 | Msa1121200:CDS | 40.0% |
| ! | TGGCTTTACCCATAGTTTGT+TGG | + | chr7_3:71287202-71287221 | Msa1121200:CDS | 40.0% |
| AGGTACGTCCAACAAACTAT+GGG | - | chr7_3:71287213-71287232 | None:intergenic | 40.0% | |
| AAAATGCACCAATGGTGAAC+AGG | - | chr7_3:71287233-71287252 | None:intergenic | 40.0% | |
| TAGGGAGAAAAATGCACCAA+TGG | - | chr7_3:71287241-71287260 | None:intergenic | 40.0% | |
| ! | TTGGTGCATTTTTCTCCCTA+TGG | + | chr7_3:71287241-71287260 | Msa1121200:CDS | 40.0% |
| CTCCAACCATACTATCCATA+GGG | - | chr7_3:71287259-71287278 | None:intergenic | 40.0% | |
| TCTCCAACCATACTATCCAT+AGG | - | chr7_3:71287260-71287279 | None:intergenic | 40.0% | |
| ATGAATGCGTAGATGCAAAG+AGG | - | chr7_3:71287438-71287457 | None:intergenic | 40.0% | |
| TTTGCATCTACGCATTCATC+TGG | + | chr7_3:71287439-71287458 | Msa1121200:CDS | 40.0% | |
| CTGGCGATTACTGTTGAAAA+AGG | + | chr7_3:71287458-71287477 | Msa1121200:CDS | 40.0% | |
| GATTACTGTTGAAAAAGGCC+AGG | + | chr7_3:71287463-71287482 | Msa1121200:CDS | 40.0% | |
| CAGGTACGTCCAACAAACTA+TGG | - | chr7_3:71287214-71287233 | None:intergenic | 45.0% | |
| CTCCCTATGGATAGTATGGT+TGG | + | chr7_3:71287254-71287273 | Msa1121200:CDS | 45.0% | |
| GAAACTTGGGCTTTCATAGC+TGG | - | chr7_3:71287357-71287376 | None:intergenic | 45.0% | |
| !! | GGCTCGGTTGATGAGTGTTA+AGG | + | chr7_3:71287053-71287072 | Msa1121200:CDS | 50.0% |
| TGGACGTACCTGTTCACCAT+TGG | + | chr7_3:71287222-71287241 | Msa1121200:CDS | 50.0% | |
| GGTTGGAGACGACCGATGTT+AGG | + | chr7_3:71287271-71287290 | Msa1121200:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 71287051 | 71287497 | 71287051 | ID=Msa1121200;Name=Msa1121200 |
| chr7_3 | mRNA | 71287051 | 71287497 | 71287051 | ID=Msa1121200-mRNA-1;Parent=Msa1121200;Name=Msa1121200-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|148 |
| chr7_3 | exon | 71287051 | 71287497 | 71287051 | ID=Msa1121200-mRNA-1:exon:18176;Parent=Msa1121200-mRNA-1 |
| chr7_3 | CDS | 71287051 | 71287497 | 71287051 | ID=Msa1121200-mRNA-1:cds;Parent=Msa1121200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
