Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476070 | KEH35865.1 | 91.286 | 241 | 6 | 1 | 1 | 226 | 1 | 241 | 7.88e-157 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476070 | sp|Q9M439|BCAT2_ARATH | 59.414 | 239 | 78 | 3 | 7 | 226 | 4 | 242 | 1.39e-92 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476070 | A0A072VCL1 | 91.286 | 241 | 6 | 1 | 1 | 226 | 1 | 241 | 3.77e-157 | 449 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037720 | Msa0476070 | 0.800706 | 1.270587e-48 | -8.615850e-47 |
| Msa0052780 | Msa0476070 | 0.807625 | 4.614178e-50 | -8.615850e-47 |
| Msa0083240 | Msa0476070 | 0.826479 | 2.652304e-54 | -8.615850e-47 |
| Msa0087550 | Msa0476070 | 0.803551 | 3.303210e-49 | -8.615850e-47 |
| Msa0093740 | Msa0476070 | 0.803507 | 3.372917e-49 | -8.615850e-47 |
| Msa0097570 | Msa0476070 | 0.800593 | 1.339867e-48 | -8.615850e-47 |
| Msa0129640 | Msa0476070 | 0.850846 | 1.304203e-60 | -8.615850e-47 |
| Msa0132430 | Msa0476070 | 0.810793 | 9.659027e-51 | -8.615850e-47 |
| Msa0182020 | Msa0476070 | 0.824854 | 6.440748e-54 | -8.615850e-47 |
| Msa0224210 | Msa0476070 | 0.810171 | 1.315849e-50 | -8.615850e-47 |
| Msa0238140 | Msa0476070 | 0.805144 | 1.538139e-49 | -8.615850e-47 |
| Msa0374790 | Msa0476070 | 0.824422 | 8.142041e-54 | -8.615850e-47 |
| Msa0381470 | Msa0476070 | 0.910656 | 1.467289e-82 | -8.615850e-47 |
| Msa0390790 | Msa0476070 | 0.812181 | 4.824837e-51 | -8.615850e-47 |
| Msa0424000 | Msa0476070 | 0.812146 | 4.909432e-51 | -8.615850e-47 |
| Msa0434140 | Msa0476070 | 0.801171 | 1.021128e-48 | -8.615850e-47 |
| Msa0458220 | Msa0476070 | 0.829026 | 6.480697e-55 | -8.615850e-47 |
| Msa0470920 | Msa0476070 | 0.843091 | 1.733491e-58 | -8.615850e-47 |
| Msa0476070 | Msa0480770 | 0.842655 | 2.264043e-58 | -8.615850e-47 |
| Msa0476070 | Msa0481100 | 0.890013 | 1.445879e-73 | -8.615850e-47 |
| Msa0476070 | Msa0504700 | 0.829855 | 4.075285e-55 | -8.615850e-47 |
| Msa0476070 | Msa0519910 | 0.918488 | 1.465525e-86 | -8.615850e-47 |
| Msa0476070 | Msa0537340 | 0.815361 | 9.614098e-52 | -8.615850e-47 |
| Msa0476070 | Msa0577370 | 0.814655 | 1.379496e-51 | -8.615850e-47 |
| Msa0476070 | Msa0577640 | 0.805509 | 1.289705e-49 | -8.615850e-47 |
| Msa0476070 | Msa0577730 | 0.820439 | 6.856190e-53 | -8.615850e-47 |
| Msa0476070 | Msa0586160 | 0.802720 | 4.907620e-49 | -8.615850e-47 |
| Msa0476070 | Msa0593730 | 0.801106 | 1.052664e-48 | -8.615850e-47 |
| Msa0476070 | Msa0602180 | 0.823948 | 1.052050e-53 | -8.615850e-47 |
| Msa0476070 | Msa0609420 | 0.848356 | 6.457938e-60 | -8.615850e-47 |
| Msa0476070 | Msa0613800 | 0.836167 | 1.096735e-56 | -8.615850e-47 |
| Msa0476070 | Msa0617040 | 0.839312 | 1.708908e-57 | -8.615850e-47 |
| Msa0476070 | Msa0636740 | 0.817501 | 3.190959e-52 | -8.615850e-47 |
| Msa0476070 | Msa0636770 | 0.821968 | 3.044361e-53 | -8.615850e-47 |
| Msa0476070 | Msa0645450 | 0.816969 | 4.203910e-52 | -8.615850e-47 |
| Msa0476070 | Msa0650060 | 0.844827 | 5.938877e-59 | -8.615850e-47 |
| Msa0476070 | Msa0652700 | 0.853366 | 2.506828e-61 | -8.615850e-47 |
| Msa0476070 | Msa0656100 | 0.839442 | 1.580980e-57 | -8.615850e-47 |
| Msa0476070 | Msa0692050 | 0.803074 | 4.145547e-49 | -8.615850e-47 |
| Msa0476070 | Msa0708600 | 0.816484 | 5.400676e-52 | -8.615850e-47 |
| Msa0476070 | Msa0945230 | 0.838716 | 2.437835e-57 | -8.615850e-47 |
| Msa0476070 | Msa0982380 | 0.814891 | 1.222891e-51 | -8.615850e-47 |
| Msa0476070 | Msa1028660 | 0.804720 | 1.886239e-49 | -8.615850e-47 |
| Msa0476070 | Msa1038940 | 0.802622 | 5.139819e-49 | -8.615850e-47 |
| Msa0476070 | Msa1157200 | 0.824642 | 7.227067e-54 | -8.615850e-47 |
| Msa0476070 | Msa1173150 | 0.800043 | 1.734393e-48 | -8.615850e-47 |
| Msa0476070 | Msa1217260 | 0.829635 | 4.610351e-55 | -8.615850e-47 |
| Msa0476070 | Msa1217950 | 0.890039 | 1.411743e-73 | -8.615850e-47 |
| Msa0476070 | Msa1219790 | 0.880102 | 7.235118e-70 | -8.615850e-47 |
| Msa0476070 | Msa1267080 | 0.880198 | 6.686301e-70 | -8.615850e-47 |
| Msa0476070 | Msa1302340 | 0.842610 | 2.328589e-58 | -8.615850e-47 |
| Msa0476070 | Msa1370080 | 0.823861 | 1.102722e-53 | -8.615850e-47 |
| Msa0476070 | Msa1401550 | 0.891254 | 4.699340e-74 | -8.615850e-47 |
| Msa0476070 | Msa1412410 | 0.850387 | 1.755498e-60 | -8.615850e-47 |
| Msa0476070 | Msa1427860 | 0.851863 | 6.728136e-61 | -8.615850e-47 |
| Msa0476070 | Msa1443220 | 0.818103 | 2.333555e-52 | -8.615850e-47 |
| Msa0476070 | Msa1462640 | 0.936961 | 7.496896e-98 | -8.615850e-47 |
| Msa0265480 | Msa0476070 | 0.808995 | 2.354044e-50 | -8.615850e-47 |
| Msa0268070 | Msa0476070 | 0.874089 | 8.864360e-68 | -8.615850e-47 |
| Msa0340370 | Msa0476070 | 0.809479 | 1.853979e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476070 | MtrunA17_Chr3g0135321 | 91.286 | 241 | 6 | 1 | 1 | 226 | 1 | 241 | 1.21e-160 | 450 |
| Msa0476070 | MtrunA17_Chr5g0400811 | 63.682 | 201 | 58 | 1 | 40 | 225 | 61 | 261 | 7.44e-89 | 268 |
| Msa0476070 | MtrunA17_Chr4g0049241 | 57.426 | 202 | 66 | 4 | 43 | 226 | 59 | 258 | 6.03e-78 | 240 |
| Msa0476070 | MtrunA17_Chr4g0049231 | 50.532 | 188 | 78 | 1 | 52 | 224 | 22 | 209 | 3.96e-65 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476070 | AT1G10070.1 | 59.414 | 239 | 78 | 3 | 7 | 226 | 4 | 242 | 1.41e-93 | 280 |
| Msa0476070 | AT1G10070.2 | 59.414 | 239 | 78 | 3 | 7 | 226 | 4 | 242 | 1.41e-93 | 280 |
| Msa0476070 | AT3G49680.1 | 64.398 | 191 | 52 | 1 | 51 | 225 | 75 | 265 | 4.65e-87 | 264 |
| Msa0476070 | AT3G49680.2 | 64.398 | 191 | 52 | 1 | 51 | 225 | 73 | 263 | 4.73e-87 | 264 |
| Msa0476070 | AT1G10060.1 | 63.402 | 194 | 56 | 1 | 48 | 226 | 45 | 238 | 3.92e-86 | 258 |
| Msa0476070 | AT1G10060.2 | 63.402 | 194 | 56 | 1 | 48 | 226 | 45 | 238 | 1.04e-85 | 259 |
| Msa0476070 | AT5G65780.1 | 62.371 | 194 | 58 | 1 | 47 | 225 | 74 | 267 | 1.76e-85 | 260 |
| Msa0476070 | AT1G10060.7 | 63.402 | 194 | 56 | 1 | 48 | 226 | 45 | 238 | 2.20e-85 | 258 |
| Msa0476070 | AT1G10060.6 | 63.402 | 194 | 56 | 1 | 48 | 226 | 141 | 334 | 5.28e-85 | 258 |
| Msa0476070 | AT1G10060.5 | 53.226 | 248 | 91 | 5 | 1 | 226 | 90 | 334 | 1.18e-84 | 260 |
| Msa0476070 | AT1G10060.4 | 53.226 | 248 | 91 | 5 | 1 | 226 | 90 | 334 | 2.31e-84 | 259 |
| Msa0476070 | AT1G10070.3 | 67.442 | 172 | 41 | 1 | 70 | 226 | 1 | 172 | 1.68e-78 | 239 |
| Msa0476070 | AT1G50090.1 | 54.808 | 208 | 76 | 3 | 36 | 226 | 3 | 209 | 2.31e-76 | 235 |
| Msa0476070 | AT1G50110.1 | 54.369 | 206 | 77 | 3 | 36 | 226 | 3 | 206 | 2.01e-75 | 232 |
| Msa0476070 | AT1G10060.3 | 62.791 | 172 | 49 | 1 | 70 | 226 | 1 | 172 | 3.43e-72 | 223 |
| Msa0476070 | AT3G19710.1 | 48.293 | 205 | 90 | 2 | 37 | 226 | 2 | 205 | 2.57e-65 | 206 |
| Msa0476070 | AT1G50110.2 | 55.814 | 172 | 60 | 2 | 70 | 226 | 1 | 171 | 1.58e-63 | 201 |
Find 84 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTGCATATAGCTATTT+TGG | 0.101153 | 3_3:-79799462 | None:intergenic |
| CAGTGAACTTTCCAAGTTTA+AGG | 0.116340 | 3_3:+79799685 | Msa0476070:CDS |
| TGTAGTGCTGGCCAAAATTT+TGG | 0.137189 | 3_3:+79801470 | Msa0476070:CDS |
| ATATGGTACCGGTGCATAAT+TGG | 0.225695 | 3_3:-79805469 | None:intergenic |
| TTAGGAAGTGGTCCGGTTCT+TGG | 0.250877 | 3_3:+79805199 | Msa0476070:CDS |
| GCTGTCCATGTCCAAAATTT+TGG | 0.281068 | 3_3:-79801481 | None:intergenic |
| CAATTCCGGACCCAACTTAC+AGG | 0.297018 | 3_3:+79801220 | Msa0476070:CDS |
| ACAGTGTAATATAATGTAAA+TGG | 0.304797 | 3_3:-79799622 | None:intergenic |
| ATCATACCTGGCCATAATTT+AGG | 0.308609 | 3_3:-79801547 | None:intergenic |
| TCCGCAGGGGTCCTAAATTA+TGG | 0.310746 | 3_3:+79801536 | Msa0476070:CDS |
| GATTGGGACAGCCTTGGGTT+TGG | 0.329076 | 3_3:+79801413 | Msa0476070:CDS |
| GCAAAGGATCGTTGTATCTT+AGG | 0.329627 | 3_3:+79805167 | Msa0476070:CDS |
| GCCCTCCCCTCTTCCAATTC+CGG | 0.331887 | 3_3:+79801206 | Msa0476070:CDS |
| TCAACAAGATAAGATATATT+AGG | 0.337256 | 3_3:-79799523 | None:intergenic |
| CTGTAAGTTGGGTCCGGAAT+TGG | 0.338583 | 3_3:-79801219 | None:intergenic |
| CCCTGTTCGCAACTATTTCA+AGG | 0.338859 | 3_3:+79805264 | Msa0476070:CDS |
| ATGTGGATTGGGACAGCCTT+GGG | 0.366715 | 3_3:+79801408 | Msa0476070:CDS |
| TATCTTAGGCCACTGCTCTT+AGG | 0.375755 | 3_3:+79805181 | Msa0476070:CDS |
| TTGGACATGGACAGCTTAAT+CGG | 0.380425 | 3_3:+79801489 | Msa0476070:CDS |
| ACCTTGAAATAGTTGCGAAC+AGG | 0.388998 | 3_3:-79805265 | None:intergenic |
| CTATATGCAGATTGCATAGC+TGG | 0.393157 | 3_3:+79799471 | Msa0476070:five_prime_UTR |
| TATATGAGGAATGTGTATTC+AGG | 0.397711 | 3_3:-79805235 | None:intergenic |
| AGAAGCAGTTTCCTTAAACT+TGG | 0.398954 | 3_3:-79799696 | None:intergenic |
| TATTATAGTTACCTGTAAGT+TGG | 0.436071 | 3_3:-79801231 | None:intergenic |
| ACTTAATTTGTACGTGGAAG+AGG | 0.438422 | 3_3:+79805398 | Msa0476070:CDS |
| CGTGCTTCGCAACGCGGGAC+TGG | 0.439406 | 3_3:+79805429 | Msa0476070:CDS |
| ATTATAGTTACCTGTAAGTT+GGG | 0.439858 | 3_3:-79801230 | None:intergenic |
| TACCGGTGCATAATTGGAAA+TGG | 0.455649 | 3_3:-79805463 | None:intergenic |
| CATGGACAGCTTAATCGGTA+TGG | 0.457574 | 3_3:+79801494 | Msa0476070:CDS |
| AGGAAACTGCTTCTTCGTCC+TGG | 0.467038 | 3_3:+79799705 | Msa0476070:CDS |
| AATGTGGATTGGGACAGCCT+TGG | 0.478960 | 3_3:+79801407 | Msa0476070:CDS |
| GTCCGGAATTGGAAGAGGGG+AGG | 0.483252 | 3_3:-79801208 | None:intergenic |
| AGCTCTAGCAAATAAACGTT+GGG | 0.486780 | 3_3:+79805008 | Msa0476070:CDS |
| AGCATCAACAAATTGATCAA+TGG | 0.490126 | 3_3:-79804974 | None:intergenic |
| TAATGTATAGGTTCCTCCAC+CGG | 0.490433 | 3_3:+79805144 | Msa0476070:intron |
| AATGCTATTCGCATGAAGAT+TGG | 0.496130 | 3_3:+79804922 | Msa0476070:CDS |
| AGTTACCTGTAAGTTGGGTC+CGG | 0.496236 | 3_3:-79801225 | None:intergenic |
| AACGATCCTTTGCCCGGTGG+AGG | 0.507822 | 3_3:-79805157 | None:intergenic |
| AGATACAACGATCCTTTGCC+CGG | 0.508926 | 3_3:-79805163 | None:intergenic |
| AGGCCACTGCTCTTAGGAAG+TGG | 0.509303 | 3_3:+79805187 | Msa0476070:CDS |
| CCTTGAAATAGTTGCGAACA+GGG | 0.513370 | 3_3:-79805264 | None:intergenic |
| GTTGGGTCCGGAATTGGAAG+AGG | 0.515795 | 3_3:-79801213 | None:intergenic |
| GCTGGAGCTAAACCAAGAAC+CGG | 0.519479 | 3_3:-79805211 | None:intergenic |
| ATGAGTACGCTAATGTGGAT+TGG | 0.520629 | 3_3:+79801396 | Msa0476070:CDS |
| TCCGGAATTGGAAGAGGGGA+GGG | 0.522473 | 3_3:-79801207 | None:intergenic |
| TACGTTACAAAATGTAGTGC+TGG | 0.523205 | 3_3:+79801458 | Msa0476070:CDS |
| AACCATTTCCAATTATGCAC+CGG | 0.531718 | 3_3:+79805461 | Msa0476070:CDS |
| AGGAATGTGTATTCAGGTGC+TGG | 0.532284 | 3_3:-79805229 | None:intergenic |
| TGGTTATCGTTCTTCCTCCA+AGG | 0.534170 | 3_3:+79799725 | Msa0476070:CDS |
| GTAACGTACATGAAATCGGT+TGG | 0.536355 | 3_3:-79801443 | None:intergenic |
| ATTGAACTTAGCCCATCCGC+AGG | 0.539047 | 3_3:+79801521 | Msa0476070:CDS |
| TGAGTACGCTAATGTGGATT+GGG | 0.540805 | 3_3:+79801397 | Msa0476070:CDS |
| TCTTCCACGTACAAATTAAG+TGG | 0.543543 | 3_3:-79805396 | None:intergenic |
| TAATTTAGGACCCCTGCGGA+TGG | 0.548755 | 3_3:-79801533 | None:intergenic |
| TAGGTTCCTCCACCGGGCAA+AGG | 0.559583 | 3_3:+79805151 | Msa0476070:intron |
| AGGGGTCCTAAATTATGGCC+AGG | 0.559751 | 3_3:+79801541 | Msa0476070:CDS |
| ATGGACAGCTTAATCGGTAT+GGG | 0.560555 | 3_3:+79801495 | Msa0476070:CDS |
| CAGTCCCGCGTTGCGAAGCA+CGG | 0.561077 | 3_3:-79805428 | None:intergenic |
| TTGACCGTGCTTCGCAACGC+GGG | 0.561096 | 3_3:+79805424 | Msa0476070:CDS |
| CGATGATGAGTACGCTAATG+TGG | 0.569452 | 3_3:+79801391 | Msa0476070:CDS |
| CAGCTCTAGCAAATAAACGT+TGG | 0.570115 | 3_3:+79805007 | Msa0476070:CDS |
| AATGTATAGGTTCCTCCACC+GGG | 0.570735 | 3_3:+79805145 | Msa0476070:intron |
| TTGGGTCCGGAATTGGAAGA+GGG | 0.575596 | 3_3:-79801212 | None:intergenic |
| GAACAGGGGAAGCATATATG+AGG | 0.580432 | 3_3:-79805249 | None:intergenic |
| TAAAACGTTGATCACCTTGG+AGG | 0.582579 | 3_3:-79799739 | None:intergenic |
| AATTTAGGACCCCTGCGGAT+GGG | 0.586287 | 3_3:-79801532 | None:intergenic |
| TTGGAGGAAGAACGATAACC+AGG | 0.591557 | 3_3:-79799723 | None:intergenic |
| CGCGCCACTTAATTTGTACG+TGG | 0.594998 | 3_3:+79805392 | Msa0476070:CDS |
| ACTGCTCTTAGGAAGTGGTC+CGG | 0.600004 | 3_3:+79805192 | Msa0476070:CDS |
| TTTGACCGTGCTTCGCAACG+CGG | 0.611947 | 3_3:+79805423 | Msa0476070:CDS |
| TCAACAAATTGATCAATGGA+AGG | 0.615530 | 3_3:-79804970 | None:intergenic |
| TTGAACTTAGCCCATCCGCA+GGG | 0.617818 | 3_3:+79801522 | Msa0476070:CDS |
| TTGGCATGAGTCCAAACCCA+AGG | 0.634099 | 3_3:-79801424 | None:intergenic |
| CACGTACAAATTAAGTGGCG+CGG | 0.649503 | 3_3:-79805391 | None:intergenic |
| GTGTAATATAATGTAAATGG+TGG | 0.656734 | 3_3:-79799619 | None:intergenic |
| TACAACGATCCTTTGCCCGG+TGG | 0.674996 | 3_3:-79805160 | None:intergenic |
| TAACAGATAGGGGCTTACAA+TGG | 0.677239 | 3_3:+79801171 | Msa0476070:intron |
| TATTAGGAGAAGCAATGACA+AGG | 0.677664 | 3_3:-79799507 | None:intergenic |
| TGAACTTAGCCCATCCGCAG+GGG | 0.684106 | 3_3:+79801523 | Msa0476070:CDS |
| GGACCACTTCCTAAGAGCAG+TGG | 0.684872 | 3_3:-79805190 | None:intergenic |
| AATTAATACTAGCATGACAG+TGG | 0.686515 | 3_3:+79805737 | Msa0476070:intron |
| CTTGAAATAGTTGCGAACAG+GGG | 0.708149 | 3_3:-79805263 | None:intergenic |
| TGGGTCCGGAATTGGAAGAG+GGG | 0.711513 | 3_3:-79801211 | None:intergenic |
| GCCATAATTTAGGACCCCTG+CGG | 0.723216 | 3_3:-79801537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATCATTTTTAATTTTTT+TGG | + | chr3_3:79800401-79800420 | Msa0476070:intron | 10.0% |
| !!! | AATACGTTTTTATTTTATTA+CGG | + | chr3_3:79800983-79801002 | Msa0476070:intron | 10.0% |
| !!! | AAAGGTTTTTTTTTTTTTTT+TGG | + | chr3_3:79801301-79801320 | Msa0476070:intron | 10.0% |
| !!! | AAGGTTTTTTTTTTTTTTTT+GGG | + | chr3_3:79801302-79801321 | Msa0476070:intron | 10.0% |
| !!! | TCTTTTTAAACAATTTTTTT+AGG | - | chr3_3:79802316-79802335 | None:intergenic | 10.0% |
| !! | TAAAATAATTAGTAATAACT+TGG | - | chr3_3:79804100-79804119 | None:intergenic | 10.0% |
| !! | AACTAAAACATTTGATATTA+AGG | + | chr3_3:79799939-79799958 | Msa0476070:intron | 15.0% |
| !!! | ACTTTAAGTTTTATTTTTGT+CGG | - | chr3_3:79800064-79800083 | None:intergenic | 15.0% |
| !!! | TCATTAACATTTTCATATTA+TGG | + | chr3_3:79800086-79800105 | Msa0476070:intron | 15.0% |
| !!! | TAAATCTCCATAATATTTTA+AGG | + | chr3_3:79800289-79800308 | Msa0476070:intron | 15.0% |
| !!! | AAATCTCCATAATATTTTAA+GGG | + | chr3_3:79800290-79800309 | Msa0476070:intron | 15.0% |
| !! | TTAATTCCCTTAAAATATTA+TGG | - | chr3_3:79800299-79800318 | None:intergenic | 15.0% |
| !!! | ATACGTTTTTATTTTATTAC+GGG | + | chr3_3:79800984-79801003 | Msa0476070:intron | 15.0% |
| !!! | AGGTTTTTTTTTTTTTTTTG+GGG | + | chr3_3:79801303-79801322 | Msa0476070:intron | 15.0% |
| !! | AATTATATAATCATTTAACC+AGG | + | chr3_3:79801778-79801797 | Msa0476070:intron | 15.0% |
| !! | AATATTCAAAAAAAGATGTA+GGG | - | chr3_3:79802105-79802124 | None:intergenic | 15.0% |
| !! | AAATATTCAAAAAAAGATGT+AGG | - | chr3_3:79802106-79802125 | None:intergenic | 15.0% |
| !!! | ATATTATAGATAATTTTAGG+AGG | - | chr3_3:79802700-79802719 | None:intergenic | 15.0% |
| !! | GAATATGAAGAAAAATAAAT+TGG | - | chr3_3:79802894-79802913 | None:intergenic | 15.0% |
| !! | TCATTTAAAAAATGAACTAT+AGG | - | chr3_3:79804676-79804695 | None:intergenic | 15.0% |
| !! | TCAACAAGATAAGATATATT+AGG | - | chr3_3:79799526-79799545 | None:intergenic | 20.0% |
| !! | ACAGTGTAATATAATGTAAA+TGG | - | chr3_3:79799625-79799644 | None:intergenic | 20.0% |
| !!! | TTTAATTTTCTCATCAAAGT+CGG | + | chr3_3:79799781-79799800 | Msa0476070:intron | 20.0% |
| !!! | ATTATTTTTTTCTTTCTCAG+TGG | + | chr3_3:79799902-79799921 | Msa0476070:intron | 20.0% |
| !!! | TGATTTTCTTCTTCAAATTT+TGG | + | chr3_3:79800007-79800026 | Msa0476070:intron | 20.0% |
| !!! | AAATTGATTCATATGAACAT+TGG | - | chr3_3:79800038-79800057 | None:intergenic | 20.0% |
| !!! | TACATGACATTTTTATAATG+GGG | - | chr3_3:79800145-79800164 | None:intergenic | 20.0% |
| !!! | GTACATGACATTTTTATAAT+GGG | - | chr3_3:79800146-79800165 | None:intergenic | 20.0% |
| !!! | AGTACATGACATTTTTATAA+TGG | - | chr3_3:79800147-79800166 | None:intergenic | 20.0% |
| !! | CATATAGGAAAATTTAGATT+CGG | - | chr3_3:79800190-79800209 | None:intergenic | 20.0% |
| !!! | GTATTTCACTTTTTTCATAT+AGG | - | chr3_3:79800205-79800224 | None:intergenic | 20.0% |
| !! | AAAAAGTGAAATACCAATAT+AGG | + | chr3_3:79800211-79800230 | Msa0476070:intron | 20.0% |
| !! | TTTAAATTAGTATAGAGTGA+AGG | - | chr3_3:79800237-79800256 | None:intergenic | 20.0% |
| !! | ACTAATTTAAAGACACATTT+AGG | + | chr3_3:79800246-79800265 | Msa0476070:intron | 20.0% |
| !! | CTAATTTAAAGACACATTTA+GGG | + | chr3_3:79800247-79800266 | Msa0476070:intron | 20.0% |
| !! | CTCATTTATTAGTACTAATT+GGG | - | chr3_3:79800553-79800572 | None:intergenic | 20.0% |
| !! | CAATTAGTACTAATAAATGA+GGG | + | chr3_3:79800552-79800571 | Msa0476070:intron | 20.0% |
| !! | GGAAAATAAAATAGTTAGAT+AGG | + | chr3_3:79800573-79800592 | Msa0476070:intron | 20.0% |
| !! | AATAAAATAGTTAGATAGGA+AGG | + | chr3_3:79800577-79800596 | Msa0476070:intron | 20.0% |
| !! | TCTTGTGTATTATATTATTC+AGG | + | chr3_3:79800607-79800626 | Msa0476070:intron | 20.0% |
| !! | CTTGTGTATTATATTATTCA+GGG | + | chr3_3:79800608-79800627 | Msa0476070:intron | 20.0% |
| !! | TTGTGTATTATATTATTCAG+GGG | + | chr3_3:79800609-79800628 | Msa0476070:intron | 20.0% |
| !! | TTGTTTAAGGAAATAATATC+CGG | - | chr3_3:79801056-79801075 | None:intergenic | 20.0% |
| !!! | TAATACACAAGTTTTGTTTA+AGG | - | chr3_3:79801069-79801088 | None:intergenic | 20.0% |
| !!! | TTTGTATGTATCTTTTTTAG+AGG | + | chr3_3:79801611-79801630 | Msa0476070:intron | 20.0% |
| !!! | TGACTGACTTTAATATTTTA+GGG | - | chr3_3:79801866-79801885 | None:intergenic | 20.0% |
| !!! | ATGACTGACTTTAATATTTT+AGG | - | chr3_3:79801867-79801886 | None:intergenic | 20.0% |
| !! | ATAAAACTTAACCAATTGTA+AGG | + | chr3_3:79802835-79802854 | Msa0476070:intron | 20.0% |
| !!! | TAAATTGGTTAAGTTTTATG+AGG | - | chr3_3:79802879-79802898 | None:intergenic | 20.0% |
| !! | AGAATTGCAAAATTAAAGAA+AGG | - | chr3_3:79803237-79803256 | None:intergenic | 20.0% |
| !!! | TTTCTTTAATTTTGCAATTC+TGG | + | chr3_3:79803236-79803255 | Msa0476070:intron | 20.0% |
| !! | ACTCTTCACAAAATTAATAT+CGG | - | chr3_3:79803264-79803283 | None:intergenic | 20.0% |
| !! | GAGATAAAATTGAAAAAAGT+TGG | + | chr3_3:79803326-79803345 | Msa0476070:intron | 20.0% |
| !! | AATAATTAGTAATAACTTGG+AGG | - | chr3_3:79804097-79804116 | None:intergenic | 20.0% |
| !! | GTAAAAGTAGAAAGTTATAA+GGG | - | chr3_3:79804129-79804148 | None:intergenic | 20.0% |
| !! | AGTAAAAGTAGAAAGTTATA+AGG | - | chr3_3:79804130-79804149 | None:intergenic | 20.0% |
| !!! | TTATGAAAACAACTATTTTC+TGG | + | chr3_3:79804166-79804185 | Msa0476070:intron | 20.0% |
| !!! | AAAAAAACCTTCTATCTTTT+TGG | - | chr3_3:79804434-79804453 | None:intergenic | 20.0% |
| !!! | TTTTAATTAAAATTGACACG+AGG | - | chr3_3:79805049-79805068 | None:intergenic | 20.0% |
| !! | TAGACCAATTATTAATGTAT+AGG | + | chr3_3:79805132-79805151 | Msa0476070:intron | 20.0% |
| ! | GTGTAATATAATGTAAATGG+TGG | - | chr3_3:79799622-79799641 | None:intergenic | 25.0% |
| ! | ATTTATAAGTCACGAGAAAT+CGG | - | chr3_3:79800437-79800456 | None:intergenic | 25.0% |
| !!! | GATTTTCACTTTTAAACCTA+CGG | - | chr3_3:79800502-79800521 | None:intergenic | 25.0% |
| ! | TTTATTAGTACTAATTGGGT+TGG | - | chr3_3:79800549-79800568 | None:intergenic | 25.0% |
| ! | CCTCATTTATTAGTACTAAT+TGG | - | chr3_3:79800554-79800573 | None:intergenic | 25.0% |
| ! | CCAATTAGTACTAATAAATG+AGG | + | chr3_3:79800551-79800570 | Msa0476070:intron | 25.0% |
| ! | TGTTTAAGGAAATAATATCC+GGG | - | chr3_3:79801055-79801074 | None:intergenic | 25.0% |
| !! | GAAGCATTCATTTAAACATT+TGG | + | chr3_3:79801127-79801146 | Msa0476070:intron | 25.0% |
| ! | AAAATCACATCATAACAGAT+AGG | + | chr3_3:79801159-79801178 | Msa0476070:intron | 25.0% |
| ! | AAATCACATCATAACAGATA+GGG | + | chr3_3:79801160-79801179 | Msa0476070:intron | 25.0% |
| ! | ATTATAGTTACCTGTAAGTT+GGG | - | chr3_3:79801233-79801252 | None:intergenic | 25.0% |
| ! | TATTATAGTTACCTGTAAGT+TGG | - | chr3_3:79801234-79801253 | None:intergenic | 25.0% |
| !! | TACGTAATTGTAATTTGCAA+AGG | + | chr3_3:79801283-79801302 | Msa0476070:intron | 25.0% |
| !! | TTTTGTAACGTACATGAAAT+CGG | - | chr3_3:79801450-79801469 | None:intergenic | 25.0% |
| ! | ACATGTTGAGATCTTTATAT+TGG | - | chr3_3:79801740-79801759 | None:intergenic | 25.0% |
| ! | TATATAATCATTTAACCAGG+TGG | + | chr3_3:79801781-79801800 | Msa0476070:intron | 25.0% |
| ! | ATTCCAAATCTATAGTGATA+AGG | + | chr3_3:79801971-79801990 | Msa0476070:intron | 25.0% |
| ! | AATTAGATGAGATCATTAAG+AGG | - | chr3_3:79802197-79802216 | None:intergenic | 25.0% |
| !! | TTCCAGAAATTTGTTTATTG+TGG | + | chr3_3:79802247-79802266 | Msa0476070:intron | 25.0% |
| !! | TCCAGAAATTTGTTTATTGT+GGG | + | chr3_3:79802248-79802267 | Msa0476070:intron | 25.0% |
| ! | TACATACGTATATTGTTGAT+AGG | + | chr3_3:79802360-79802379 | Msa0476070:intron | 25.0% |
| ! | TTATGTTCATCTCACTTATA+TGG | - | chr3_3:79802507-79802526 | None:intergenic | 25.0% |
| !! | AAATCATGTCTTGAGATTTT+TGG | - | chr3_3:79802538-79802557 | None:intergenic | 25.0% |
| ! | AATCTCAAGACATGATTTAT+AGG | + | chr3_3:79802540-79802559 | Msa0476070:intron | 25.0% |
| !!! | GATTAAATTAGCCTTACAAT+TGG | - | chr3_3:79802849-79802868 | None:intergenic | 25.0% |
| !!! | ATTTTTTATGGTATCACTCT+TGG | + | chr3_3:79802944-79802963 | Msa0476070:intron | 25.0% |
| ! | AGAAATAGCATAACTTCAAA+TGG | - | chr3_3:79803190-79803209 | None:intergenic | 25.0% |
| ! | AAAAAAGTTGGAACAGAAAA+GGG | + | chr3_3:79803338-79803357 | Msa0476070:intron | 25.0% |
| ! | AAATCAGCCAATAAAAAAAC+AGG | + | chr3_3:79803586-79803605 | Msa0476070:intron | 25.0% |
| ! | TGAAAGAGTAGTAAAAGTTT+CGG | + | chr3_3:79803755-79803774 | Msa0476070:intron | 25.0% |
| ! | GAAATACATGATCAAGTTAT+TGG | + | chr3_3:79803777-79803796 | Msa0476070:intron | 25.0% |
| ! | TGTGCATAAAATTGATGTAT+TGG | - | chr3_3:79803943-79803962 | None:intergenic | 25.0% |
| ! | ACACATACAATAATGAGAAA+AGG | + | chr3_3:79803960-79803979 | Msa0476070:intron | 25.0% |
| ! | ATTGTAATGTTTAGATTGGA+GGG | - | chr3_3:79804394-79804413 | None:intergenic | 25.0% |
| ! | AGAGATTGTAATGTTTAGAT+TGG | - | chr3_3:79804398-79804417 | None:intergenic | 25.0% |
| ! | TTGTTTACAACCAAATTGTT+TGG | - | chr3_3:79804536-79804555 | None:intergenic | 25.0% |
| ! | TTTGAATGTCGATGTAAAAT+TGG | - | chr3_3:79804566-79804585 | None:intergenic | 25.0% |
| ! | AAAATATAGGGATTATTCGA+AGG | + | chr3_3:79804844-79804863 | Msa0476070:intron | 25.0% |
| ! | GGAACCTATACATTAATAAT+TGG | - | chr3_3:79805139-79805158 | None:intergenic | 25.0% |
| !! | GAATTGAGTGATTTGAAATA+TGG | - | chr3_3:79805489-79805508 | None:intergenic | 25.0% |
| !! | TGTAGCTTTTGTCAAAATTA+TGG | + | chr3_3:79805617-79805636 | Msa0476070:intron | 25.0% |
| !! | TGTCATGCTAGTATTAATTT+TGG | - | chr3_3:79805736-79805755 | None:intergenic | 25.0% |
| ! | CAATCTGCATATAGCTATTT+TGG | - | chr3_3:79799465-79799484 | None:intergenic | 30.0% |
| GCACAAAACAATGAAAAAAG+AGG | - | chr3_3:79799555-79799574 | None:intergenic | 30.0% | |
| !!! | GTGTTTTTTGGAAATCCTAT+GGG | - | chr3_3:79799589-79799608 | None:intergenic | 30.0% |
| !!! | TGTGTTTTTTGGAAATCCTA+TGG | - | chr3_3:79799590-79799609 | None:intergenic | 30.0% |
| GGTAAAACGAAAACTTGAAA+AGG | - | chr3_3:79799833-79799852 | None:intergenic | 30.0% | |
| GAATCAAGAAAACAGAGATA+GGG | - | chr3_3:79799854-79799873 | None:intergenic | 30.0% | |
| TAAGATACTCATAACAGACA+AGG | - | chr3_3:79799876-79799895 | None:intergenic | 30.0% | |
| ! | AATTAAGCCTCCAATTTTCT+GGG | + | chr3_3:79800313-79800332 | Msa0476070:intron | 30.0% |
| CTCAATTAATACACTTGGTT+TGG | + | chr3_3:79800339-79800358 | Msa0476070:intron | 30.0% | |
| !!! | TTTAATTTTTTTGGCCCCTT+TGG | + | chr3_3:79800410-79800429 | Msa0476070:intron | 30.0% |
| AAGAAGTTGAATTTATCCGT+AGG | + | chr3_3:79800483-79800502 | Msa0476070:intron | 30.0% | |
| TGTATTATATTATTCAGGGG+TGG | + | chr3_3:79800612-79800631 | Msa0476070:intron | 30.0% | |
| !!! | TTTTTGAAGCTCATACCTTA+AGG | - | chr3_3:79800674-79800693 | None:intergenic | 30.0% |
| ACTATTGTTGTGACTTCTAT+TGG | + | chr3_3:79800699-79800718 | Msa0476070:intron | 30.0% | |
| CTAAAACAAGACAATTGAAG+AGG | - | chr3_3:79800787-79800806 | None:intergenic | 30.0% | |
| !!! | CTCTTCAATTGTCTTGTTTT+AGG | + | chr3_3:79800785-79800804 | Msa0476070:intron | 30.0% |
| !! | TGTTTTAGGCCTATTAGAAT+AGG | + | chr3_3:79800799-79800818 | Msa0476070:intron | 30.0% |
| !! | GTTTTAGGCCTATTAGAATA+GGG | + | chr3_3:79800800-79800819 | Msa0476070:intron | 30.0% |
| !!! | GTGTTAGGTTGATGTTTTTT+GGG | + | chr3_3:79800837-79800856 | Msa0476070:intron | 30.0% |
| CAAGATGTGTCTTATATATG+CGG | - | chr3_3:79800917-79800936 | None:intergenic | 30.0% | |
| GAAAAAACCGTGTATTATTG+TGG | + | chr3_3:79801096-79801115 | Msa0476070:intron | 30.0% | |
| ATCAACTCCACAATAATACA+CGG | - | chr3_3:79801106-79801125 | None:intergenic | 30.0% | |
| AATCACATCATAACAGATAG+GGG | + | chr3_3:79801161-79801180 | Msa0476070:intron | 30.0% | |
| GCAAATTACAATTACGTACT+AGG | - | chr3_3:79801281-79801300 | None:intergenic | 30.0% | |
| !!! | CGTCACTAGATTTGTTATTT+TGG | - | chr3_3:79801373-79801392 | None:intergenic | 30.0% |
| ! | AGCTATCTTTATCGTTCTTT+TGG | - | chr3_3:79801716-79801735 | None:intergenic | 30.0% |
| AACAGTAAAAGAGAGATTGA+TGG | + | chr3_3:79801898-79801917 | Msa0476070:intron | 30.0% | |
| ACAGTAAAAGAGAGATTGAT+GGG | + | chr3_3:79801899-79801918 | Msa0476070:intron | 30.0% | |
| TCACCTTATCACTATAGATT+TGG | - | chr3_3:79801977-79801996 | None:intergenic | 30.0% | |
| GTACAAGAAGCAAGTAAAAT+GGG | - | chr3_3:79802028-79802047 | None:intergenic | 30.0% | |
| TGTACAAGAAGCAAGTAAAA+TGG | - | chr3_3:79802029-79802048 | None:intergenic | 30.0% | |
| GAATATTTGAACCCAAAGAT+AGG | + | chr3_3:79802118-79802137 | Msa0476070:intron | 30.0% | |
| TGGATAATAAAGAACTTGGT+AGG | - | chr3_3:79802220-79802239 | None:intergenic | 30.0% | |
| TCGTTGGATAATAAAGAACT+TGG | - | chr3_3:79802224-79802243 | None:intergenic | 30.0% | |
| AAGTTCTTTATTATCCAACG+AGG | + | chr3_3:79802223-79802242 | Msa0476070:intron | 30.0% | |
| ! | CCAGAAATTTGTTTATTGTG+GGG | + | chr3_3:79802249-79802268 | Msa0476070:intron | 30.0% |
| ! | CAGAAATTTGTTTATTGTGG+GGG | + | chr3_3:79802250-79802269 | Msa0476070:intron | 30.0% |
| CATGTTATATAGTAAGTGTG+AGG | - | chr3_3:79802621-79802640 | None:intergenic | 30.0% | |
| !! | GTTAAGTTTTATGTGTCAGA+AGG | - | chr3_3:79802827-79802846 | None:intergenic | 30.0% |
| !! | GGTTAAGTTTTATGAGGATA+AGG | - | chr3_3:79802873-79802892 | None:intergenic | 30.0% |
| TGGATTAAATCATTGCATGA+AGG | - | chr3_3:79802916-79802935 | None:intergenic | 30.0% | |
| TCATGCAATGATTTAATCCA+AGG | + | chr3_3:79802916-79802935 | Msa0476070:intron | 30.0% | |
| !!! | TCCAAGGCACTTATTTTTTA+TGG | + | chr3_3:79802932-79802951 | Msa0476070:intron | 30.0% |
| ACCATAAAAAATAAGTGCCT+TGG | - | chr3_3:79802936-79802955 | None:intergenic | 30.0% | |
| TTCAATTGAATGCTCAAGAT+TGG | - | chr3_3:79803047-79803066 | None:intergenic | 30.0% | |
| ATAACTTCAAATGGTACCAA+TGG | - | chr3_3:79803181-79803200 | None:intergenic | 30.0% | |
| GAAGAAGAAGAATTCAACTT+CGG | - | chr3_3:79803215-79803234 | None:intergenic | 30.0% | |
| GAAAAAAGTTGGAACAGAAA+AGG | + | chr3_3:79803337-79803356 | Msa0476070:intron | 30.0% | |
| ATATTTCAGCTGAAGTCAAA+TGG | - | chr3_3:79803415-79803434 | None:intergenic | 30.0% | |
| TTAATTTCACGATATTGTCC+CGG | - | chr3_3:79803481-79803500 | None:intergenic | 30.0% | |
| ATAGCACAGCTGATATAAAA+TGG | - | chr3_3:79803526-79803545 | None:intergenic | 30.0% | |
| AAGTGGCTTATTGAAATACA+CGG | + | chr3_3:79803658-79803677 | Msa0476070:intron | 30.0% | |
| ! | ATTTTGCGTATAATAGTGAC+CGG | - | chr3_3:79803815-79803834 | None:intergenic | 30.0% |
| ! | CTTTTGCTTATAATAGTGAC+AGG | + | chr3_3:79803889-79803908 | Msa0476070:intron | 30.0% |
| CATACAATAATGAGAAAAGG+TGG | + | chr3_3:79803963-79803982 | Msa0476070:intron | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr3_3:79804249-79804268 | Msa0476070:intron | 30.0% | |
| !!! | CAAATCCACCATCTTTTTTA+TGG | - | chr3_3:79804300-79804319 | None:intergenic | 30.0% |
| !! | CATAAAAAAGATGGTGGATT+TGG | + | chr3_3:79804298-79804317 | Msa0476070:intron | 30.0% |
| ATGTGAGAGAAAGTAAATCA+AGG | - | chr3_3:79804365-79804384 | None:intergenic | 30.0% | |
| TTGTAATGTTTAGATTGGAG+GGG | - | chr3_3:79804393-79804412 | None:intergenic | 30.0% | |
| GATTGTAATGTTTAGATTGG+AGG | - | chr3_3:79804395-79804414 | None:intergenic | 30.0% | |
| !! | AAACCTTCTATCTTTTTGGT+GGG | - | chr3_3:79804430-79804449 | None:intergenic | 30.0% |
| ! | AAAACCTTCTATCTTTTTGG+TGG | - | chr3_3:79804431-79804450 | None:intergenic | 30.0% |
| CTACTTTAACGTTCTTGTAT+CGG | + | chr3_3:79804597-79804616 | Msa0476070:intron | 30.0% | |
| ! | TCATGCATCACTATTTTCTA+TGG | - | chr3_3:79804651-79804670 | None:intergenic | 30.0% |
| AAAGCATACAGAAAGGAAAA+TGG | + | chr3_3:79804871-79804890 | Msa0476070:intron | 30.0% | |
| AAGCATACAGAAAGGAAAAT+GGG | + | chr3_3:79804872-79804891 | Msa0476070:intron | 30.0% | |
| TCAACAAATTGATCAATGGA+AGG | - | chr3_3:79804973-79804992 | None:intergenic | 30.0% | |
| AGCATCAACAAATTGATCAA+TGG | - | chr3_3:79804977-79804996 | None:intergenic | 30.0% | |
| TATATGAGGAATGTGTATTC+AGG | - | chr3_3:79805238-79805257 | None:intergenic | 30.0% | |
| AGGATTTATTAACTCCAACT+TGG | + | chr3_3:79805341-79805360 | Msa0476070:intron | 30.0% | |
| TTTATTAACTCCAACTTGGA+TGG | + | chr3_3:79805345-79805364 | Msa0476070:intron | 30.0% | |
| ! | AGTGATTTGAAATATGGTAC+CGG | - | chr3_3:79805483-79805502 | None:intergenic | 30.0% |
| TGCATTTATAAGTGCATGAT+TGG | - | chr3_3:79805685-79805704 | None:intergenic | 30.0% | |
| AATTAATACTAGCATGACAG+TGG | + | chr3_3:79805737-79805756 | Msa0476070:intron | 30.0% | |
| TATTAGGAGAAGCAATGACA+AGG | - | chr3_3:79799510-79799529 | None:intergenic | 35.0% | |
| !!! | GGTGATTGTGTTGTGTTTTT+TGG | - | chr3_3:79799601-79799620 | None:intergenic | 35.0% |
| CAGTGAACTTTCCAAGTTTA+AGG | + | chr3_3:79799685-79799704 | Msa0476070:CDS | 35.0% | |
| AGAAGCAGTTTCCTTAAACT+TGG | - | chr3_3:79799699-79799718 | None:intergenic | 35.0% | |
| AAGTAAAACGTTGATCACCT+TGG | - | chr3_3:79799745-79799764 | None:intergenic | 35.0% | |
| GGAATCAAGAAAACAGAGAT+AGG | - | chr3_3:79799855-79799874 | None:intergenic | 35.0% | |
| TATAGAGTGAAGGCCTATAT+TGG | - | chr3_3:79800227-79800246 | None:intergenic | 35.0% | |
| ! | GAATTAAGCCTCCAATTTTC+TGG | + | chr3_3:79800312-79800331 | Msa0476070:intron | 35.0% |
| ! | ATTAAGCCTCCAATTTTCTG+GGG | + | chr3_3:79800314-79800333 | Msa0476070:intron | 35.0% |
| !! | ATTAGTACTAATTGGGTTGG+AGG | - | chr3_3:79800546-79800565 | None:intergenic | 35.0% |
| TTGAAGAGGAAAGTGAAAAC+CGG | - | chr3_3:79800773-79800792 | None:intergenic | 35.0% | |
| CAAGAAGACCCTATTCTAAT+AGG | - | chr3_3:79800811-79800830 | None:intergenic | 35.0% | |
| !!! | GGTGTTAGGTTGATGTTTTT+TGG | + | chr3_3:79800836-79800855 | Msa0476070:intron | 35.0% |
| !!! | TAGGTTGATGTTTTTTGGGA+TGG | + | chr3_3:79800841-79800860 | Msa0476070:intron | 35.0% |
| AAATCACTACGGTATACATG+AGG | - | chr3_3:79800879-79800898 | None:intergenic | 35.0% | |
| TACGTTACAAAATGTAGTGC+TGG | + | chr3_3:79801458-79801477 | Msa0476070:CDS | 35.0% | |
| ATCATACCTGGCCATAATTT+AGG | - | chr3_3:79801550-79801569 | None:intergenic | 35.0% | |
| TTGACATTAGTCATCATACC+TGG | - | chr3_3:79801562-79801581 | None:intergenic | 35.0% | |
| TTTGTATTCATCTACAGCTG+TGG | - | chr3_3:79801661-79801680 | None:intergenic | 35.0% | |
| CAGTAAAAGAGAGATTGATG+GGG | + | chr3_3:79801900-79801919 | Msa0476070:intron | 35.0% | |
| CCCCACAATAAACAAATTTC+TGG | - | chr3_3:79802252-79802271 | None:intergenic | 35.0% | |
| ! | ATACATGAGACTGTGTTGTT+GGG | + | chr3_3:79802438-79802457 | Msa0476070:intron | 35.0% |
| ACCTAATGGAGATGATCAAT+CGG | - | chr3_3:79802475-79802494 | None:intergenic | 35.0% | |
| !!! | TATGGTTGCTTTTGACCTAA+TGG | - | chr3_3:79802489-79802508 | None:intergenic | 35.0% |
| TTATGGTATCACTCTTGGAA+AGG | + | chr3_3:79802949-79802968 | Msa0476070:intron | 35.0% | |
| TATATCCTGCATTCTACGAA+GGG | - | chr3_3:79803006-79803025 | None:intergenic | 35.0% | |
| TTATATCCTGCATTCTACGA+AGG | - | chr3_3:79803007-79803026 | None:intergenic | 35.0% | |
| AATGCTCAAGATTGGAGAAT+GGG | - | chr3_3:79803039-79803058 | None:intergenic | 35.0% | |
| GAGCATTCAATTGAAACCAT+TGG | + | chr3_3:79803052-79803071 | Msa0476070:intron | 35.0% | |
| AGTGTTCAAGAACTTAGAGA+CGG | - | chr3_3:79803080-79803099 | None:intergenic | 35.0% | |
| AGAGAAATAGCATAGCTTGA+AGG | - | chr3_3:79803139-79803158 | None:intergenic | 35.0% | |
| AAGCATCCTATCAAAACCAT+TGG | + | chr3_3:79803162-79803181 | Msa0476070:intron | 35.0% | |
| !!! | ATGGTACCAATGGTTTTGAT+AGG | - | chr3_3:79803171-79803190 | None:intergenic | 35.0% |
| GTGAAGAAGAGAAAAGAGTA+AGG | + | chr3_3:79803298-79803317 | Msa0476070:intron | 35.0% | |
| CAATAAAAAAACAGGCTGAG+CGG | + | chr3_3:79803594-79803613 | Msa0476070:intron | 35.0% | |
| TTATTGGAAAATACTCCCTC+CGG | + | chr3_3:79803793-79803812 | Msa0476070:intron | 35.0% | |
| TTGCTTATAATAGTGACAGG+AGG | + | chr3_3:79803892-79803911 | Msa0476070:intron | 35.0% | |
| TGCTTATAATAGTGACAGGA+GGG | + | chr3_3:79803893-79803912 | Msa0476070:intron | 35.0% | |
| !!! | ATCCACCATCTTTTTTATGG+TGG | - | chr3_3:79804297-79804316 | None:intergenic | 35.0% |
| !! | TTCTATCTTTTTGGTGGGAA+AGG | - | chr3_3:79804425-79804444 | None:intergenic | 35.0% |
| TTTCCCACCAAAAAGATAGA+AGG | + | chr3_3:79804424-79804443 | Msa0476070:intron | 35.0% | |
| GAATTAGCTGCCAAACAATT+TGG | + | chr3_3:79804523-79804542 | Msa0476070:intron | 35.0% | |
| ! | GAATAGCATTTTCTTGTGGA+CGG | - | chr3_3:79804912-79804931 | None:intergenic | 35.0% |
| ! | ATGCGAATAGCATTTTCTTG+TGG | - | chr3_3:79804916-79804935 | None:intergenic | 35.0% |
| AATGCTATTCGCATGAAGAT+TGG | + | chr3_3:79804922-79804941 | Msa0476070:CDS | 35.0% | |
| ! | AGCTCTAGCAAATAAACGTT+GGG | + | chr3_3:79805008-79805027 | Msa0476070:CDS | 35.0% |
| !!! | TTGTTTTTGCAAATTGCAGC+TGG | + | chr3_3:79805318-79805337 | Msa0476070:intron | 35.0% |
| AGTTAACAAACCATCCAAGT+TGG | - | chr3_3:79805358-79805377 | None:intergenic | 35.0% | |
| TCTTCCACGTACAAATTAAG+TGG | - | chr3_3:79805399-79805418 | None:intergenic | 35.0% | |
| !! | ACTTAATTTGTACGTGGAAG+AGG | + | chr3_3:79805398-79805417 | Msa0476070:CDS | 35.0% |
| AACCATTTCCAATTATGCAC+CGG | + | chr3_3:79805461-79805480 | Msa0476070:CDS | 35.0% | |
| !!! | AACTCATGCCTAGTTTTACT+TGG | + | chr3_3:79805525-79805544 | Msa0476070:intron | 35.0% |
| CAGCGAGTTAAATGAAATAG+TGG | + | chr3_3:79805564-79805583 | Msa0476070:intron | 35.0% | |
| CGAGTTAAATGAAATAGTGG+TGG | + | chr3_3:79805567-79805586 | Msa0476070:intron | 35.0% | |
| TAAGTGCATGATTGGATAGA+CGG | - | chr3_3:79805677-79805696 | None:intergenic | 35.0% | |
| CTATATGCAGATTGCATAGC+TGG | + | chr3_3:79799471-79799490 | Msa0476070:five_prime_UTR | 40.0% | |
| !! | CACTGTTTTGAACAACCAGA+AGG | + | chr3_3:79799639-79799658 | Msa0476070:five_prime_UTR | 40.0% |
| ! | ATCATTTTGCTCGATCCTTC+TGG | - | chr3_3:79799657-79799676 | None:intergenic | 40.0% |
| TAAAACGTTGATCACCTTGG+AGG | - | chr3_3:79799742-79799761 | None:intergenic | 40.0% | |
| ! | TTAAGCCTCCAATTTTCTGG+GGG | + | chr3_3:79800315-79800334 | Msa0476070:intron | 40.0% |
| AATTGAGTCCCCCAGAAAAT+TGG | - | chr3_3:79800326-79800345 | None:intergenic | 40.0% | |
| GGGGACTCAATTAATACACT+TGG | + | chr3_3:79800334-79800353 | Msa0476070:intron | 40.0% | |
| !! | TACTAATTGGGTTGGAGGAA+TGG | - | chr3_3:79800541-79800560 | None:intergenic | 40.0% |
| TATTATTCAGGGGTGGATCT+TGG | + | chr3_3:79800619-79800638 | Msa0476070:intron | 40.0% | |
| ATTATTCAGGGGTGGATCTT+GGG | + | chr3_3:79800620-79800639 | Msa0476070:intron | 40.0% | |
| TTGAAGCTCATACCTTAAGG+AGG | - | chr3_3:79800671-79800690 | None:intergenic | 40.0% | |
| !!! | GGTTTTTGGTAGTTATGTGC+CGG | + | chr3_3:79800751-79800770 | Msa0476070:intron | 40.0% |
| ! | GAATAGGGTCTTCTTGCTTT+TGG | + | chr3_3:79800815-79800834 | Msa0476070:intron | 40.0% |
| !!! | GTCTTCTTGCTTTTGGTGTT+AGG | + | chr3_3:79800822-79800841 | Msa0476070:intron | 40.0% |
| !!! | GTTGATGTTTTTTGGGATGG+TGG | + | chr3_3:79800844-79800863 | Msa0476070:intron | 40.0% |
| !!! | TTTTTTGGGATGGTGGTTTG+AGG | + | chr3_3:79800851-79800870 | Msa0476070:intron | 40.0% |
| ! | ACCGTAGTGATTTTCACCTT+TGG | + | chr3_3:79800886-79800905 | Msa0476070:intron | 40.0% |
| CCCAAAGGTGAAAATCACTA+CGG | - | chr3_3:79800890-79800909 | None:intergenic | 40.0% | |
| ! | CCGTAGTGATTTTCACCTTT+GGG | + | chr3_3:79800887-79800906 | Msa0476070:intron | 40.0% |
| TATATATGCGGTACACCCAA+AGG | - | chr3_3:79800905-79800924 | None:intergenic | 40.0% | |
| TAACAGATAGGGGCTTACAA+TGG | + | chr3_3:79801171-79801190 | Msa0476070:intron | 40.0% | |
| ATGAGTACGCTAATGTGGAT+TGG | + | chr3_3:79801396-79801415 | Msa0476070:CDS | 40.0% | |
| TGAGTACGCTAATGTGGATT+GGG | + | chr3_3:79801397-79801416 | Msa0476070:CDS | 40.0% | |
| GTAACGTACATGAAATCGGT+TGG | - | chr3_3:79801446-79801465 | None:intergenic | 40.0% | |
| !!! | TGTAGTGCTGGCCAAAATTT+TGG | + | chr3_3:79801470-79801489 | Msa0476070:CDS | 40.0% |
| ! | GCTGTCCATGTCCAAAATTT+TGG | - | chr3_3:79801484-79801503 | None:intergenic | 40.0% |
| TTGGACATGGACAGCTTAAT+CGG | + | chr3_3:79801489-79801508 | Msa0476070:CDS | 40.0% | |
| ATGGACAGCTTAATCGGTAT+GGG | + | chr3_3:79801495-79801514 | Msa0476070:CDS | 40.0% | |
| CTGTGGATAACATTGATGCA+TGG | - | chr3_3:79801644-79801663 | None:intergenic | 40.0% | |
| CTCAACATGTGTACAAGTGA+TGG | + | chr3_3:79801750-79801769 | Msa0476070:intron | 40.0% | |
| TGAGTTTGTCTGCATTAGGA+TGG | - | chr3_3:79801952-79801971 | None:intergenic | 40.0% | |
| GGAATGAGTTTGTCTGCATT+AGG | - | chr3_3:79801956-79801975 | None:intergenic | 40.0% | |
| !! | CAAATTTCTGGAATCCTCGT+TGG | - | chr3_3:79802240-79802259 | None:intergenic | 40.0% |
| CAACAACACAGTCTCATGTA+TGG | - | chr3_3:79802439-79802458 | None:intergenic | 40.0% | |
| CATACATGAGACTGTGTTGT+TGG | + | chr3_3:79802437-79802456 | Msa0476070:intron | 40.0% | |
| ! | ACTGTGTTGTTGGGTCATAA+GGG | + | chr3_3:79802447-79802466 | Msa0476070:intron | 40.0% |
| CACTCTTGGAAAGGAATAGA+TGG | + | chr3_3:79802958-79802977 | Msa0476070:intron | 40.0% | |
| ATATCCTGCATTCTACGAAG+GGG | - | chr3_3:79803005-79803024 | None:intergenic | 40.0% | |
| GAATGCTCAAGATTGGAGAA+TGG | - | chr3_3:79803040-79803059 | None:intergenic | 40.0% | |
| TGGAACAGAAAAGGGTGATA+AGG | + | chr3_3:79803346-79803365 | Msa0476070:intron | 40.0% | |
| GGAACAGAAAAGGGTGATAA+GGG | + | chr3_3:79803347-79803366 | Msa0476070:intron | 40.0% | |
| !!! | CGCTCAGCCTGTTTTTTTAT+TGG | - | chr3_3:79803596-79803615 | None:intergenic | 40.0% |
| AGATGCTGGTCAACAAAAAG+TGG | + | chr3_3:79803641-79803660 | Msa0476070:intron | 40.0% | |
| ! | CTTGCTTGGACACATGTTTT+TGG | - | chr3_3:79804070-79804089 | None:intergenic | 40.0% |
| ATTTGTCACCAGCTCATAGA+TGG | + | chr3_3:79804189-79804208 | Msa0476070:intron | 40.0% | |
| CATAAAATATGCAAGGTCCG+AGG | + | chr3_3:79804256-79804275 | Msa0476070:intron | 40.0% | |
| !!! | TCTTTTTTATGGTGGTGGCT+GGG | - | chr3_3:79804289-79804308 | None:intergenic | 40.0% |
| !!! | ATCTTTTTTATGGTGGTGGC+TGG | - | chr3_3:79804290-79804309 | None:intergenic | 40.0% |
| AGCCACCACCATAAAAAAGA+TGG | + | chr3_3:79804289-79804308 | Msa0476070:intron | 40.0% | |
| !!! | CACCATCTTTTTTATGGTGG+TGG | - | chr3_3:79804294-79804313 | None:intergenic | 40.0% |
| CACCACCATAAAAAAGATGG+TGG | + | chr3_3:79804292-79804311 | Msa0476070:intron | 40.0% | |
| !! | ATCTTTTTGGTGGGAAAGGT+AGG | - | chr3_3:79804421-79804440 | None:intergenic | 40.0% |
| CCATAATGTTTGTGCCTTTC+AGG | - | chr3_3:79804497-79804516 | None:intergenic | 40.0% | |
| ! | CCTGAAAGGCACAAACATTA+TGG | + | chr3_3:79804494-79804513 | Msa0476070:intron | 40.0% |
| !! | ACGTTCTTGTATCGGTTACA+CGG | + | chr3_3:79804605-79804624 | Msa0476070:intron | 40.0% |
| ! | CAGCTCTAGCAAATAAACGT+TGG | + | chr3_3:79805007-79805026 | Msa0476070:CDS | 40.0% |
| TAATGTATAGGTTCCTCCAC+CGG | + | chr3_3:79805144-79805163 | Msa0476070:intron | 40.0% | |
| GCAAAGGATCGTTGTATCTT+AGG | + | chr3_3:79805167-79805186 | Msa0476070:CDS | 40.0% | |
| CTTGAAATAGTTGCGAACAG+GGG | - | chr3_3:79805266-79805285 | None:intergenic | 40.0% | |
| CCTTGAAATAGTTGCGAACA+GGG | - | chr3_3:79805267-79805286 | None:intergenic | 40.0% | |
| ACCTTGAAATAGTTGCGAAC+AGG | - | chr3_3:79805268-79805287 | None:intergenic | 40.0% | |
| ! | TTTTTGCAAATTGCAGCTGG+AGG | + | chr3_3:79805321-79805340 | Msa0476070:intron | 40.0% |
| !! | GGATGGTTTGTTAACTTGAC+AGG | + | chr3_3:79805362-79805381 | Msa0476070:intron | 40.0% |
| !! | GGTTTGTTAACTTGACAGGA+AGG | + | chr3_3:79805366-79805385 | Msa0476070:intron | 40.0% |
| TACCGGTGCATAATTGGAAA+TGG | - | chr3_3:79805466-79805485 | None:intergenic | 40.0% | |
| !! | ATATGGTACCGGTGCATAAT+TGG | - | chr3_3:79805472-79805491 | None:intergenic | 40.0% |
| ACCATGCACCAAGTAAAACT+AGG | - | chr3_3:79805536-79805555 | None:intergenic | 40.0% | |
| !!! | AGTTTTACTTGGTGCATGGT+TGG | + | chr3_3:79805536-79805555 | Msa0476070:intron | 40.0% |
| AAGTGCATGATTGGATAGAC+GGG | - | chr3_3:79805676-79805695 | None:intergenic | 40.0% | |
| TTGGAGGAAGAACGATAACC+AGG | - | chr3_3:79799726-79799745 | None:intergenic | 45.0% | |
| TGGTTATCGTTCTTCCTCCA+AGG | + | chr3_3:79799725-79799744 | Msa0476070:CDS | 45.0% | |
| TCACGAGAAATCGGTCCAAA+GGG | - | chr3_3:79800428-79800447 | None:intergenic | 45.0% | |
| TTATTCAGGGGTGGATCTTG+GGG | + | chr3_3:79800621-79800640 | Msa0476070:intron | 45.0% | |
| GCAAAGAGCTCAATGGAGTT+AGG | + | chr3_3:79800645-79800664 | Msa0476070:intron | 45.0% | |
| AATGGAGTTAGGCCTCCTTA+AGG | + | chr3_3:79800656-79800675 | Msa0476070:intron | 45.0% | |
| TTGTTGTGCTGCCAACTTTG+TGG | + | chr3_3:79800722-79800741 | Msa0476070:intron | 45.0% | |
| TGTTGTGCTGCCAACTTTGT+GGG | + | chr3_3:79800723-79800742 | Msa0476070:intron | 45.0% | |
| ! | AGTTACCTGTAAGTTGGGTC+CGG | - | chr3_3:79801228-79801247 | None:intergenic | 45.0% |
| CGATGATGAGTACGCTAATG+TGG | + | chr3_3:79801391-79801410 | Msa0476070:CDS | 45.0% | |
| ! | GCTGGCCAAAATTTTGGACA+TGG | + | chr3_3:79801476-79801495 | Msa0476070:CDS | 45.0% |
| CATGGACAGCTTAATCGGTA+TGG | + | chr3_3:79801494-79801513 | Msa0476070:CDS | 45.0% | |
| ! | GGATCATCCATCGATTGTGA+CGG | + | chr3_3:79801802-79801821 | Msa0476070:intron | 45.0% |
| TTGTCTGCATTAGGATGGTG+TGG | - | chr3_3:79801947-79801966 | None:intergenic | 45.0% | |
| CACAGTCTCATGTATGGCTA+GGG | - | chr3_3:79802433-79802452 | None:intergenic | 45.0% | |
| ACACAGTCTCATGTATGGCT+AGG | - | chr3_3:79802434-79802453 | None:intergenic | 45.0% | |
| ! | GACTGTGTTGTTGGGTCATA+AGG | + | chr3_3:79802446-79802465 | Msa0476070:intron | 45.0% |
| GCCGATTGATCATCTCCATT+AGG | + | chr3_3:79802471-79802490 | Msa0476070:intron | 45.0% | |
| TGCTATATATCGCGACAGTG+TGG | + | chr3_3:79802766-79802785 | Msa0476070:intron | 45.0% | |
| ACGAAGGGGAAGTAGATCAT+GGG | - | chr3_3:79802991-79803010 | None:intergenic | 45.0% | |
| TACGAAGGGGAAGTAGATCA+TGG | - | chr3_3:79802992-79803011 | None:intergenic | 45.0% | |
| GAACTTAGAGACGGTACCAA+TGG | - | chr3_3:79803071-79803090 | None:intergenic | 45.0% | |
| GCTGAAGTCAAATGGTACAG+CGG | - | chr3_3:79803407-79803426 | None:intergenic | 45.0% | |
| GGGGAGTAATTGAAAGATGC+TGG | + | chr3_3:79803627-79803646 | Msa0476070:intron | 45.0% | |
| TGCGTATAATAGTGACCGGA+GGG | - | chr3_3:79803811-79803830 | None:intergenic | 45.0% | |
| TTGCGTATAATAGTGACCGG+AGG | - | chr3_3:79803812-79803831 | None:intergenic | 45.0% | |
| ! | AACTTGGAGGTAGTCTTGCT+TGG | - | chr3_3:79804084-79804103 | None:intergenic | 45.0% |
| CAAATCCACCATCTATGAGC+TGG | - | chr3_3:79804200-79804219 | None:intergenic | 45.0% | |
| !! | CAGCTCATAGATGGTGGATT+TGG | + | chr3_3:79804198-79804217 | Msa0476070:intron | 45.0% |
| !!! | CTTTTTTATGGTGGTGGCTG+GGG | - | chr3_3:79804288-79804307 | None:intergenic | 45.0% |
| CAAGGCTGAGATAGAGAGAA+AGG | - | chr3_3:79804347-79804366 | None:intergenic | 45.0% | |
| !! | TTCTTGTATCGGTTACACGG+AGG | + | chr3_3:79804608-79804627 | Msa0476070:intron | 45.0% |
| !! | TCTTGTATCGGTTACACGGA+GGG | + | chr3_3:79804609-79804628 | Msa0476070:intron | 45.0% |
| ! | AGGCACGAAAGCATACAGAA+AGG | + | chr3_3:79804864-79804883 | Msa0476070:intron | 45.0% |
| AATGTATAGGTTCCTCCACC+GGG | + | chr3_3:79805145-79805164 | Msa0476070:intron | 45.0% | |
| AGATACAACGATCCTTTGCC+CGG | - | chr3_3:79805166-79805185 | None:intergenic | 45.0% | |
| TATCTTAGGCCACTGCTCTT+AGG | + | chr3_3:79805181-79805200 | Msa0476070:CDS | 45.0% | |
| AGGAATGTGTATTCAGGTGC+TGG | - | chr3_3:79805232-79805251 | None:intergenic | 45.0% | |
| ! | GAACAGGGGAAGCATATATG+AGG | - | chr3_3:79805252-79805271 | None:intergenic | 45.0% |
| CCCTGTTCGCAACTATTTCA+AGG | + | chr3_3:79805264-79805283 | Msa0476070:CDS | 45.0% | |
| CACGTACAAATTAAGTGGCG+CGG | - | chr3_3:79805394-79805413 | None:intergenic | 45.0% | |
| !!! | GCCTAGTTTTACTTGGTGCA+TGG | + | chr3_3:79805532-79805551 | Msa0476070:intron | 45.0% |
| !!! | TTTTTTTTTTTATTATCAAA+AGG | - | chr3_3:79800463-79800482 | None:intergenic | 5.0% |
| !!! | TATATATTATAGATAATTTT+AGG | - | chr3_3:79802703-79802722 | None:intergenic | 5.0% |
| !! | TAAAATTATCTATAATATAT+AGG | + | chr3_3:79802702-79802721 | Msa0476070:intron | 5.0% |
| !! | AAAATTATCTATAATATATA+GGG | + | chr3_3:79802703-79802722 | Msa0476070:intron | 5.0% |
| !!! | TAATTTCATTTTTAAAATAT+AGG | + | chr3_3:79804831-79804850 | Msa0476070:intron | 5.0% |
| !!! | AATTTCATTTTTAAAATATA+GGG | + | chr3_3:79804832-79804851 | Msa0476070:intron | 5.0% |
| !!! | GTGCGTGTGCTTTTTCCCAT+AGG | + | chr3_3:79799571-79799590 | Msa0476070:five_prime_UTR | 50.0% |
| AGGAAACTGCTTCTTCGTCC+TGG | + | chr3_3:79799705-79799724 | Msa0476070:CDS | 50.0% | |
| TGAGTCCCCCAGAAAATTGG+AGG | - | chr3_3:79800323-79800342 | None:intergenic | 50.0% | |
| CACGAGAAATCGGTCCAAAG+GGG | - | chr3_3:79800427-79800446 | None:intergenic | 50.0% | |
| GTCACGAGAAATCGGTCCAA+AGG | - | chr3_3:79800429-79800448 | None:intergenic | 50.0% | |
| TTGGGGTGCAAAGAGCTCAA+TGG | + | chr3_3:79800638-79800657 | Msa0476070:intron | 50.0% | |
| AAACCATGCGCCCACAAAGT+TGG | - | chr3_3:79800736-79800755 | None:intergenic | 50.0% | |
| ! | CTTTGTGGGCGCATGGTTTT+TGG | + | chr3_3:79800737-79800756 | Msa0476070:intron | 50.0% |
| CACTTACAAAGCCGAGACTC+CGG | + | chr3_3:79801015-79801034 | Msa0476070:intron | 50.0% | |
| TTCCTACGAATCCGGAGTCT+CGG | - | chr3_3:79801029-79801048 | None:intergenic | 50.0% | |
| AGACTCCGGATTCGTAGGAA+CGG | + | chr3_3:79801029-79801048 | Msa0476070:intron | 50.0% | |
| TTGGGTCCGGAATTGGAAGA+GGG | - | chr3_3:79801215-79801234 | None:intergenic | 50.0% | |
| ! | CTGTAAGTTGGGTCCGGAAT+TGG | - | chr3_3:79801222-79801241 | None:intergenic | 50.0% |
| CAATTCCGGACCCAACTTAC+AGG | + | chr3_3:79801220-79801239 | Msa0476070:CDS | 50.0% | |
| !! | AATGTGGATTGGGACAGCCT+TGG | + | chr3_3:79801407-79801426 | Msa0476070:CDS | 50.0% |
| !! | ATGTGGATTGGGACAGCCTT+GGG | + | chr3_3:79801408-79801427 | Msa0476070:CDS | 50.0% |
| TTGGCATGAGTCCAAACCCA+AGG | - | chr3_3:79801427-79801446 | None:intergenic | 50.0% | |
| ATTGAACTTAGCCCATCCGC+AGG | + | chr3_3:79801521-79801540 | Msa0476070:CDS | 50.0% | |
| TTGAACTTAGCCCATCCGCA+GGG | + | chr3_3:79801522-79801541 | Msa0476070:CDS | 50.0% | |
| ! | AATTTAGGACCCCTGCGGAT+GGG | - | chr3_3:79801535-79801554 | None:intergenic | 50.0% |
| ! | TAATTTAGGACCCCTGCGGA+TGG | - | chr3_3:79801536-79801555 | None:intergenic | 50.0% |
| TCCGCAGGGGTCCTAAATTA+TGG | + | chr3_3:79801536-79801555 | Msa0476070:CDS | 50.0% | |
| ! | GCCATAATTTAGGACCCCTG+CGG | - | chr3_3:79801540-79801559 | None:intergenic | 50.0% |
| AGGGGTCCTAAATTATGGCC+AGG | + | chr3_3:79801541-79801560 | Msa0476070:CDS | 50.0% | |
| CAATCGATGGATGATCCACC+TGG | - | chr3_3:79801799-79801818 | None:intergenic | 50.0% | |
| ! | TCATCCATCGATTGTGACGG+TGG | + | chr3_3:79801805-79801824 | Msa0476070:intron | 50.0% |
| CATGTAACTCCCCCTCAAAC+CGG | - | chr3_3:79801836-79801855 | None:intergenic | 50.0% | |
| ATGGTGTGGACCAACCGAAT+GGG | - | chr3_3:79801933-79801952 | None:intergenic | 50.0% | |
| TTCTCGCGGGTCCTATCTTT+GGG | - | chr3_3:79802132-79802151 | None:intergenic | 50.0% | |
| TTACCCTCCAATCTTCTCGC+GGG | - | chr3_3:79802145-79802164 | None:intergenic | 50.0% | |
| CTTACCCTCCAATCTTCTCG+CGG | - | chr3_3:79802146-79802165 | None:intergenic | 50.0% | |
| ACTTCCCCTTCGTAGAATGC+AGG | + | chr3_3:79802998-79803017 | Msa0476070:intron | 50.0% | |
| AGTCAAATGGTACAGCGGTG+CGG | - | chr3_3:79803402-79803421 | None:intergenic | 50.0% | |
| ! | CCTTTTCGTGAAGAGCTCGT+GGG | - | chr3_3:79803566-79803585 | None:intergenic | 50.0% |
| ! | TCCTTTTCGTGAAGAGCTCG+TGG | - | chr3_3:79803567-79803586 | None:intergenic | 50.0% |
| AACAGGCTGAGCGGAAATCA+TGG | + | chr3_3:79803603-79803622 | Msa0476070:intron | 50.0% | |
| ACAGGCTGAGCGGAAATCAT+GGG | + | chr3_3:79803604-79803623 | Msa0476070:intron | 50.0% | |
| GGTCGCTGTGTTTCACGAAA+GGG | + | chr3_3:79803679-79803698 | Msa0476070:intron | 50.0% | |
| AGGAGGGAGCAGTACTTAGT+TGG | + | chr3_3:79803909-79803928 | Msa0476070:intron | 50.0% | |
| TGTCACCAGCTCATAGATGG+TGG | + | chr3_3:79804192-79804211 | Msa0476070:intron | 50.0% | |
| CCAACTAAGCTAAGCTCACG+AGG | - | chr3_3:79804225-79804244 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGCTTAGT+TGG | + | chr3_3:79804222-79804241 | Msa0476070:intron | 50.0% | |
| GGTTACACGGAGGGTGAATA+CGG | + | chr3_3:79804618-79804637 | Msa0476070:intron | 50.0% | |
| ACTGCTCTTAGGAAGTGGTC+CGG | + | chr3_3:79805192-79805211 | Msa0476070:CDS | 50.0% | |
| TTAGGAAGTGGTCCGGTTCT+TGG | + | chr3_3:79805199-79805218 | Msa0476070:CDS | 50.0% | |
| GCTGGAGCTAAACCAAGAAC+CGG | - | chr3_3:79805214-79805233 | None:intergenic | 50.0% | |
| !! | CGCGCCACTTAATTTGTACG+TGG | + | chr3_3:79805392-79805411 | Msa0476070:CDS | 50.0% |
| TCCGGAATTGGAAGAGGGGA+GGG | - | chr3_3:79801210-79801229 | None:intergenic | 55.0% | |
| TGGGTCCGGAATTGGAAGAG+GGG | - | chr3_3:79801214-79801233 | None:intergenic | 55.0% | |
| GTTGGGTCCGGAATTGGAAG+AGG | - | chr3_3:79801216-79801235 | None:intergenic | 55.0% | |
| GATTGGGACAGCCTTGGGTT+TGG | + | chr3_3:79801413-79801432 | Msa0476070:CDS | 55.0% | |
| TGAACTTAGCCCATCCGCAG+GGG | + | chr3_3:79801523-79801542 | Msa0476070:CDS | 55.0% | |
| ! | TCCATCGATTGTGACGGTGG+TGG | + | chr3_3:79801808-79801827 | Msa0476070:intron | 55.0% |
| ACCACCACCGTCACAATCGA+TGG | - | chr3_3:79801812-79801831 | None:intergenic | 55.0% | |
| GATGGGGTCACGTACCCATT+CGG | + | chr3_3:79801916-79801935 | Msa0476070:intron | 55.0% | |
| GATGGTGTGGACCAACCGAA+TGG | - | chr3_3:79801934-79801953 | None:intergenic | 55.0% | |
| CTTCTCGCGGGTCCTATCTT+TGG | - | chr3_3:79802133-79802152 | None:intergenic | 55.0% | |
| GATAGGACCCGCGAGAAGAT+TGG | + | chr3_3:79802135-79802154 | Msa0476070:intron | 55.0% | |
| TATCGCGACAGTGTGGTTCG+CGG | + | chr3_3:79802773-79802792 | Msa0476070:intron | 55.0% | |
| CCCACGAGCTCTTCACGAAA+AGG | + | chr3_3:79803563-79803582 | Msa0476070:intron | 55.0% | |
| CAGGCTGAGCGGAAATCATG+GGG | + | chr3_3:79803605-79803624 | Msa0476070:intron | 55.0% | |
| AGGCTGAGCGGAAATCATGG+GGG | + | chr3_3:79803606-79803625 | Msa0476070:intron | 55.0% | |
| CGGTCGCTGTGTTTCACGAA+AGG | + | chr3_3:79803678-79803697 | Msa0476070:intron | 55.0% | |
| CTTTCAGGAGTGACGCTCGA+GGG | - | chr3_3:79804482-79804501 | None:intergenic | 55.0% | |
| TACAACGATCCTTTGCCCGG+TGG | - | chr3_3:79805163-79805182 | None:intergenic | 55.0% | |
| AGGCCACTGCTCTTAGGAAG+TGG | + | chr3_3:79805187-79805206 | Msa0476070:CDS | 55.0% | |
| GGACCACTTCCTAAGAGCAG+TGG | - | chr3_3:79805193-79805212 | None:intergenic | 55.0% | |
| TTTGACCGTGCTTCGCAACG+CGG | + | chr3_3:79805423-79805442 | Msa0476070:CDS | 55.0% | |
| CTGCCAACTTTGTGGGCGCA+TGG | + | chr3_3:79800730-79800749 | Msa0476070:intron | 60.0% | |
| AGCCGAGACTCCGGATTCGT+AGG | + | chr3_3:79801024-79801043 | Msa0476070:intron | 60.0% | |
| GCCCTCCCCTCTTCCAATTC+CGG | + | chr3_3:79801206-79801225 | Msa0476070:CDS | 60.0% | |
| GTCCGGAATTGGAAGAGGGG+AGG | - | chr3_3:79801211-79801230 | None:intergenic | 60.0% | |
| ! | GATTGTGACGGTGGTGGTGC+CGG | + | chr3_3:79801814-79801833 | Msa0476070:intron | 60.0% |
| GGGTCACGTACCCATTCGGT+TGG | + | chr3_3:79801920-79801939 | Msa0476070:intron | 60.0% | |
| AGGACCCGCGAGAAGATTGG+AGG | + | chr3_3:79802138-79802157 | Msa0476070:intron | 60.0% | |
| GGACCCGCGAGAAGATTGGA+GGG | + | chr3_3:79802139-79802158 | Msa0476070:intron | 60.0% | |
| GTGAGGTGGCTGCTGGCAAT+TGG | - | chr3_3:79803457-79803476 | None:intergenic | 60.0% | |
| GATATTGTCCCGGCGTGAGG+TGG | - | chr3_3:79803471-79803490 | None:intergenic | 60.0% | |
| CACGATATTGTCCCGGCGTG+AGG | - | chr3_3:79803474-79803493 | None:intergenic | 60.0% | |
| GGCTGAGCGGAAATCATGGG+GGG | + | chr3_3:79803607-79803626 | Msa0476070:intron | 60.0% | |
| GCTGAGCGGAAATCATGGGG+GGG | + | chr3_3:79803608-79803627 | Msa0476070:intron | 60.0% | |
| GGTGGCTGGGGTTTGAACCT+CGG | - | chr3_3:79804276-79804295 | None:intergenic | 60.0% | |
| CCTTTCAGGAGTGACGCTCG+AGG | - | chr3_3:79804483-79804502 | None:intergenic | 60.0% | |
| CCTCGAGCGTCACTCCTGAA+AGG | + | chr3_3:79804480-79804499 | Msa0476070:intron | 60.0% | |
| TAGGTTCCTCCACCGGGCAA+AGG | + | chr3_3:79805151-79805170 | Msa0476070:intron | 60.0% | |
| AACGATCCTTTGCCCGGTGG+AGG | - | chr3_3:79805160-79805179 | None:intergenic | 60.0% | |
| TTGACCGTGCTTCGCAACGC+GGG | + | chr3_3:79805424-79805443 | Msa0476070:CDS | 60.0% | |
| CCGGGCCGTTCCTACGAATC+CGG | - | chr3_3:79801037-79801056 | None:intergenic | 65.0% | |
| CCGGATTCGTAGGAACGGCC+CGG | + | chr3_3:79801034-79801053 | Msa0476070:intron | 65.0% | |
| !! | ACGGTGGTGGTGCCGGTTTG+AGG | + | chr3_3:79801821-79801840 | Msa0476070:intron | 65.0% |
| !! | CGGTGGTGGTGCCGGTTTGA+GGG | + | chr3_3:79801822-79801841 | Msa0476070:intron | 65.0% |
| !! | GGTGGTGGTGCCGGTTTGAG+GGG | + | chr3_3:79801823-79801842 | Msa0476070:intron | 65.0% |
| !! | GTGGTGGTGCCGGTTTGAGG+GGG | + | chr3_3:79801824-79801843 | Msa0476070:intron | 65.0% |
| CAGTCCCGCGTTGCGAAGCA+CGG | - | chr3_3:79805431-79805450 | None:intergenic | 65.0% | |
| TGCCAGCAGCCACCTCACGC+CGG | + | chr3_3:79803459-79803478 | Msa0476070:intron | 70.0% | |
| CGTGCTTCGCAACGCGGGAC+TGG | + | chr3_3:79805429-79805448 | Msa0476070:CDS | 70.0% | |
| GCCAGCAGCCACCTCACGCC+GGG | + | chr3_3:79803460-79803479 | Msa0476070:intron | 75.0% | |
| TCCCGGCGTGAGGTGGCTGC+TGG | - | chr3_3:79803464-79803483 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 79799435 | 79805784 | 79799435 | ID=Msa0476070;Name=Msa0476070 |
| chr3_3 | mRNA | 79799435 | 79805784 | 79799435 | ID=Msa0476070-mRNA-1;Parent=Msa0476070;Name=Msa0476070-mRNA-1;_AED=0.07;_eAED=0.07;_QI=237|0.33|0.14|0.85|1|1|7|0|237 |
| chr3_3 | exon | 79799435 | 79799746 | 79799435 | ID=Msa0476070-mRNA-1:exon:21660;Parent=Msa0476070-mRNA-1 |
| chr3_3 | exon | 79801177 | 79801241 | 79801177 | ID=Msa0476070-mRNA-1:exon:21661;Parent=Msa0476070-mRNA-1 |
| chr3_3 | exon | 79801388 | 79801562 | 79801388 | ID=Msa0476070-mRNA-1:exon:21662;Parent=Msa0476070-mRNA-1 |
| chr3_3 | exon | 79804898 | 79805029 | 79804898 | ID=Msa0476070-mRNA-1:exon:21663;Parent=Msa0476070-mRNA-1 |
| chr3_3 | exon | 79805154 | 79805285 | 79805154 | ID=Msa0476070-mRNA-1:exon:21664;Parent=Msa0476070-mRNA-1 |
| chr3_3 | exon | 79805384 | 79805482 | 79805384 | ID=Msa0476070-mRNA-1:exon:21665;Parent=Msa0476070-mRNA-1 |
| chr3_3 | exon | 79805749 | 79805784 | 79805749 | ID=Msa0476070-mRNA-1:exon:21666;Parent=Msa0476070-mRNA-1 |
| chr3_3 | five_prime_UTR | 79799435 | 79799671 | 79799435 | ID=Msa0476070-mRNA-1:five_prime_utr;Parent=Msa0476070-mRNA-1 |
| chr3_3 | CDS | 79799672 | 79799746 | 79799672 | ID=Msa0476070-mRNA-1:cds;Parent=Msa0476070-mRNA-1 |
| chr3_3 | CDS | 79801177 | 79801241 | 79801177 | ID=Msa0476070-mRNA-1:cds;Parent=Msa0476070-mRNA-1 |
| chr3_3 | CDS | 79801388 | 79801562 | 79801388 | ID=Msa0476070-mRNA-1:cds;Parent=Msa0476070-mRNA-1 |
| chr3_3 | CDS | 79804898 | 79805029 | 79804898 | ID=Msa0476070-mRNA-1:cds;Parent=Msa0476070-mRNA-1 |
| chr3_3 | CDS | 79805154 | 79805285 | 79805154 | ID=Msa0476070-mRNA-1:cds;Parent=Msa0476070-mRNA-1 |
| chr3_3 | CDS | 79805384 | 79805482 | 79805384 | ID=Msa0476070-mRNA-1:cds;Parent=Msa0476070-mRNA-1 |
| chr3_3 | CDS | 79805749 | 79805784 | 79805749 | ID=Msa0476070-mRNA-1:cds;Parent=Msa0476070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
