AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0607390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607390 MtrunA17_Chr4g0038981 94.833 329 17 0 1 329 1 329 0.0 634
Msa0607390 MtrunA17_Chr4g0038971 83.283 329 55 0 1 329 1 329 0.0 574
Msa0607390 MtrunA17_Chr4g0038961 84.802 329 50 0 1 329 1 329 0.0 573
Msa0607390 MtrunA17_Chr4g0039011 80.115 347 49 3 1 327 1 347 0.0 555
Msa0607390 MtrunA17_Chr4g0038941 70.570 316 91 2 15 329 44 358 3.45e-159 449
Msa0607390 MtrunA17_Chr4g0039071 56.090 312 130 4 21 325 23 334 7.15e-123 357
Msa0607390 MtrunA17_Chr4g0039021 62.116 293 105 5 43 329 1 293 1.02e-120 349
Msa0607390 MtrunA17_Chr2g0294601 53.012 332 147 4 5 328 41 371 1.20e-115 340
Msa0607390 MtrunA17_Chr2g0294591 52.615 325 144 5 12 328 20 342 8.07e-112 329
Msa0607390 MtrunA17_Chr1g0174261 54.737 285 118 5 52 327 1 283 3.58e-101 301
Msa0607390 MtrunA17_Chr7g0250301 42.722 316 170 8 17 324 2 314 1.29e-80 248
Msa0607390 MtrunA17_Chr5g0439251 41.956 317 168 8 23 324 25 340 9.38e-77 243
Msa0607390 MtrunA17_Chr3g0119541 40.683 322 177 8 21 328 24 345 5.17e-74 232
Msa0607390 MtrunA17_Chr4g0026321 38.801 317 179 6 22 324 28 343 1.08e-72 229
Msa0607390 MtrunA17_Chr4g0003281 37.791 344 195 7 4 328 16 359 3.59e-71 226
Msa0607390 MtrunA17_Chr4g0043851 38.529 340 192 9 1 324 8 346 8.91e-71 225
Msa0607390 MtrunA17_Chr8g0389741 36.364 319 190 6 23 328 28 346 1.26e-70 228
Msa0607390 MtrunA17_Chr2g0321511 37.117 326 184 7 12 324 24 341 1.43e-69 221
Msa0607390 MtrunA17_Chr4g0034901 37.685 337 193 8 4 324 9 344 2.64e-69 223
Msa0607390 MtrunA17_Chr6g0487261 34.311 341 211 6 1 328 5 345 4.43e-69 224
Msa0607390 MtrunA17_Chr1g0189111 38.889 324 186 8 18 329 26 349 6.55e-69 221
Msa0607390 MtrunA17_Chr3g0144531 37.092 337 195 8 4 324 8 343 6.40e-68 219
Msa0607390 MtrunA17_Chr1g0177171 38.486 317 181 7 22 324 37 353 3.00e-66 216
Msa0607390 MtrunA17_Chr7g0250321 41.637 281 156 6 2 277 8 285 3.04e-66 210
Msa0607390 MtrunA17_Chr1g0161011 37.386 329 190 6 4 316 5 333 9.31e-66 215
Msa0607390 MtrunA17_Chr1g0146831 37.963 324 180 9 17 324 25 343 1.10e-65 211
Msa0607390 MtrunA17_Chr1g0155001 37.888 322 185 8 23 329 24 345 4.05e-65 211
Msa0607390 MtrunA17_Chr4g0064021 35.000 320 194 7 24 329 27 346 1.04e-64 209
Msa0607390 MtrunA17_Chr2g0285901 36.905 336 194 8 6 324 3 337 1.73e-64 209
Msa0607390 MtrunA17_Chr3g0110371 36.202 337 192 8 1 317 1 334 8.91e-62 204
Msa0607390 MtrunA17_Chr7g0234821 35.714 322 182 11 24 324 27 344 3.53e-61 202
Msa0607390 MtrunA17_Chr7g0223961 36.223 323 187 9 18 326 18 335 1.57e-60 200
Msa0607390 MtrunA17_Chr5g0434591 35.691 311 184 6 23 317 23 333 1.82e-59 198
Msa0607390 MtrunA17_Chr8g0339191 33.524 349 202 11 1 325 6 348 8.25e-58 193
Msa0607390 MtrunA17_Chr4g0046311 33.746 323 191 9 23 324 23 343 2.02e-57 192
Msa0607390 MtrunA17_Chr7g0253091 34.320 338 201 10 4 324 9 342 4.60e-57 191
Msa0607390 MtrunA17_Chr8g0383311 33.538 325 200 8 20 329 40 363 2.33e-55 187
Msa0607390 MtrunA17_Chr3g0121271 33.333 324 199 7 23 329 26 349 1.23e-54 186
Msa0607390 MtrunA17_Chr6g0461601 33.742 326 197 8 17 324 20 344 1.19e-53 182
Msa0607390 MtrunA17_Chr4g0062771 32.558 344 207 10 1 325 12 349 6.27e-53 181
Msa0607390 MtrunA17_Chr4g0075031 33.333 318 196 6 23 324 45 362 2.69e-52 180
Msa0607390 MtrunA17_Chr8g0378621 30.904 343 217 7 2 328 9 347 1.06e-50 175
Msa0607390 MtrunA17_Chr3g0129341 32.164 342 214 10 3 329 14 352 4.58e-49 171
Msa0607390 MtrunA17_Chr2g0290821 33.230 322 193 10 22 324 27 345 8.76e-48 167
Msa0607390 MtrunA17_Chr4g0069801 31.949 313 197 8 27 324 32 343 1.16e-47 167
Msa0607390 MtrunA17_Chr4g0043511 34.069 317 191 10 23 324 62 375 1.80e-46 165
Msa0607390 MtrunA17_Chr3g0138741 33.639 327 199 10 15 325 23 347 3.22e-46 163
Msa0607390 MtrunA17_Chr3g0105981 32.298 322 202 11 18 325 22 341 2.41e-45 159
Msa0607390 MtrunA17_Chr1g0148391 33.642 324 197 10 20 327 23 344 1.96e-44 158
Msa0607390 MtrunA17_Chr4g0076581 32.153 339 205 12 7 324 14 348 3.38e-44 158
Msa0607390 MtrunA17_Chr2g0306311 30.460 348 194 12 23 325 30 374 7.92e-44 157
Msa0607390 MtrunA17_Chr2g0294581 39.713 209 107 7 12 210 66 265 2.39e-36 132
Msa0607390 MtrunA17_Chr2g0294581 53.535 99 43 3 232 328 187 284 6.62e-27 107
Msa0607390 MtrunA17_Chr5g0436361 28.866 291 187 11 49 324 63 348 1.88e-32 124
Msa0607390 MtrunA17_Chr4g0018861 60.227 88 34 1 241 327 87 174 5.01e-31 116
Msa0607390 MtrunA17_Chr4g0018861 50.562 89 39 2 1 87 1 86 3.06e-22 93.2
Msa0607390 MtrunA17_Chr4g0018771 57.143 91 38 1 238 327 86 176 8.09e-31 116
Msa0607390 MtrunA17_Chr4g0018771 52.857 70 33 0 21 90 24 93 1.76e-19 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0607390 AT4G16260.1 49.702 336 159 6 1 328 1 334 4.17e-112 329
Msa0607390 AT3G57260.1 51.351 333 150 8 3 329 13 339 1.86e-107 317
Msa0607390 AT3G57260.2 51.351 333 150 8 3 329 29 355 2.79e-107 317
Msa0607390 AT4G16260.2 50.163 307 144 5 29 328 1 305 4.30e-103 305
Msa0607390 AT3G57270.1 50.160 313 149 4 23 328 27 339 7.26e-103 305
Msa0607390 AT3G57240.1 50.000 320 144 7 18 329 30 341 6.40e-102 303
Msa0607390 AT5G56590.1 38.318 321 183 6 23 328 26 346 1.12e-75 241
Msa0607390 AT5G20340.1 41.234 308 167 9 22 319 42 345 5.62e-75 235
Msa0607390 AT4G26830.1 40.752 319 176 7 23 328 25 343 9.00e-74 235
Msa0607390 AT4G26830.2 40.752 319 176 7 23 328 29 347 9.36e-74 235
Msa0607390 AT4G18340.2 38.053 339 197 6 4 329 15 353 1.31e-73 232
Msa0607390 AT4G18340.1 38.053 339 197 6 4 329 15 353 1.63e-73 232
Msa0607390 AT1G77790.1 39.744 312 174 8 24 324 31 339 7.83e-73 229
Msa0607390 AT2G05790.1 39.252 321 181 7 22 328 24 344 2.35e-72 231
Msa0607390 AT5G20390.1 40.717 307 168 9 22 318 32 334 2.85e-72 228
Msa0607390 AT5G20330.1 40.193 311 172 9 18 318 29 335 6.10e-72 227
Msa0607390 AT1G30080.2 38.166 338 194 8 2 324 13 350 6.07e-71 225
Msa0607390 AT5G55180.2 38.438 333 187 10 14 329 16 347 8.23e-71 227
Msa0607390 AT1G30080.1 38.166 338 194 8 2 324 13 350 9.36e-71 226
Msa0607390 AT5G55180.1 38.554 332 186 10 15 329 17 347 9.80e-71 227
Msa0607390 AT5G42100.2 40.683 322 175 7 19 324 23 344 4.44e-70 224
Msa0607390 AT5G42100.1 40.683 322 175 7 19 324 23 344 5.87e-70 224
Msa0607390 AT2G16230.1 39.873 316 176 7 23 324 25 340 1.07e-69 226
Msa0607390 AT1G33220.1 40.614 293 161 8 22 304 33 322 5.88e-69 219
Msa0607390 AT1G32860.1 37.267 322 187 7 22 328 28 349 1.45e-68 220
Msa0607390 AT5G42720.1 37.758 339 195 9 2 324 4 342 7.21e-68 219
Msa0607390 AT2G01630.2 39.355 310 172 7 23 316 23 332 1.80e-67 216
Msa0607390 AT2G27500.2 36.478 318 188 8 21 324 27 344 2.02e-67 216
Msa0607390 AT2G27500.1 36.478 318 188 8 21 324 27 344 3.31e-67 216
Msa0607390 AT2G01630.3 39.355 310 172 7 23 316 23 332 7.36e-67 216
Msa0607390 AT2G26600.1 34.568 324 198 8 20 329 31 354 7.55e-67 215
Msa0607390 AT2G01630.1 39.355 310 172 7 23 316 23 332 4.61e-66 216
Msa0607390 AT4G34480.2 39.349 338 190 8 1 324 5 341 5.86e-66 211
Msa0607390 AT1G77780.1 35.030 334 200 10 4 324 1 330 7.88e-65 209
Msa0607390 AT3G15800.1 36.061 330 196 7 10 324 30 359 2.39e-64 209
Msa0607390 AT5G24318.4 36.012 336 195 9 4 324 12 342 2.59e-64 208
Msa0607390 AT4G34480.1 39.349 338 190 8 1 324 5 341 3.74e-64 211
Msa0607390 AT5G24318.2 36.012 336 195 9 4 324 12 342 4.67e-63 207
Msa0607390 AT5G24318.1 36.012 336 195 9 4 324 12 342 6.73e-63 207
Msa0607390 AT3G61810.1 34.161 322 193 6 23 329 55 372 8.56e-63 204
Msa0607390 AT4G29360.1 34.513 339 208 7 3 328 8 345 4.43e-60 201
Msa0607390 AT1G66250.1 36.478 318 185 7 23 324 32 348 4.31e-59 198
Msa0607390 AT4G29360.2 34.862 327 200 6 15 328 29 355 1.18e-58 197
Msa0607390 AT5G20560.1 36.275 306 182 8 23 318 34 336 1.90e-58 192
Msa0607390 AT3G07320.1 33.435 329 198 9 14 324 18 343 4.49e-57 191
Msa0607390 AT4G14080.1 33.232 328 199 10 19 328 38 363 7.60e-55 186
Msa0607390 AT2G27500.3 37.945 253 144 7 85 324 14 266 7.96e-55 181
Msa0607390 AT2G26600.2 35.271 258 154 7 85 329 3 260 5.95e-54 179
Msa0607390 AT3G23770.1 33.233 331 202 9 17 328 31 361 1.32e-53 183
Msa0607390 AT2G19440.2 33.529 340 206 10 1 324 1 336 2.83e-53 182
Msa0607390 AT2G19440.1 33.529 340 206 10 1 324 1 336 2.83e-53 182
Msa0607390 AT1G11820.1 32.258 310 194 6 23 316 44 353 7.93e-53 178
Msa0607390 AT5G58480.1 33.234 334 203 10 13 329 16 346 2.42e-52 179
Msa0607390 AT5G18220.1 32.738 336 206 9 4 324 13 343 3.62e-52 179
Msa0607390 AT1G11820.3 32.258 310 194 6 23 316 44 353 1.56e-51 177
Msa0607390 AT3G13560.4 32.075 318 200 6 23 324 26 343 2.20e-51 177
Msa0607390 AT3G13560.1 32.075 318 200 6 23 324 26 343 2.20e-51 177
Msa0607390 AT3G13560.2 32.075 318 200 6 23 324 26 343 2.20e-51 177
Msa0607390 AT3G13560.5 32.075 318 200 6 23 324 26 343 2.20e-51 177
Msa0607390 AT3G13560.3 32.075 318 200 6 23 324 26 343 2.20e-51 177
Msa0607390 AT1G11820.2 32.258 310 194 6 23 316 44 353 3.18e-51 177
Msa0607390 AT3G46570.1 34.234 333 195 11 10 324 14 340 7.02e-51 172
Msa0607390 AT5G58090.1 34.277 318 193 9 22 324 21 337 9.57e-51 175
Msa0607390 AT1G64760.1 32.059 340 212 9 2 324 3 340 9.71e-51 175
Msa0607390 AT1G64760.2 32.059 340 212 9 2 324 3 340 9.71e-51 175
Msa0607390 AT2G39640.1 33.535 331 203 10 5 324 12 336 1.27e-48 171
Msa0607390 AT4G31140.1 32.353 340 213 10 4 328 9 346 7.22e-48 168
Msa0607390 AT3G55430.1 33.750 320 193 12 19 324 25 339 1.01e-47 167
Msa0607390 AT3G04010.1 31.287 342 212 9 3 328 18 352 9.01e-47 165
Msa0607390 AT3G24330.1 31.563 339 210 11 5 325 23 357 2.41e-46 164
Msa0607390 AT4G17180.1 30.769 338 208 10 8 325 5 336 1.65e-44 159
Msa0607390 AT5G64790.1 30.149 335 216 9 10 328 15 347 3.99e-43 155
Msa0607390 AT4G34480.3 41.667 228 120 6 110 324 3 230 5.17e-43 153
Msa0607390 AT5G20870.1 31.429 315 185 12 40 328 47 356 4.58e-40 147
Msa0607390 AT5G24318.3 38.647 207 111 6 130 324 1 203 5.44e-40 143
Msa0607390 AT3G55780.1 28.146 302 194 11 46 329 58 354 3.94e-35 132

Find 93 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTATGTTGGAACCTTTA+AGG 0.089668 4_2:-54180053 None:intergenic
TATTATTATGCATATAAATA+TGG 0.212598 4_2:+54177418 Msa0607390:five_prime_UTR
CAAGCCCTTCAAGCCCTTAA+AGG 0.219614 4_2:+54180039 Msa0607390:CDS
GCTTGAAGGGCTTGTTCGTC+TGG 0.228164 4_2:-54180030 None:intergenic
CAGCGTATACTGAGTCTAAT+TGG 0.233502 4_2:-54180551 None:intergenic
GAAGCAACTGAACAACATTT+TGG 0.249494 4_2:+54180780 Msa0607390:CDS
TTCTTTAGGAAGTCTATTAT+TGG 0.255166 4_2:-54180393 None:intergenic
ATATCATATATTGTTACTTA+TGG 0.257904 4_2:+54180968 Msa0607390:three_prime_UTR
ATGCCAATCAAGCTACAAAT+TGG 0.258407 4_2:+54180118 Msa0607390:CDS
GGGCTCAGAGTCTTCCTTAT+TGG 0.265916 4_2:+54177346 Msa0607390:five_prime_UTR
TCCACAACTTCTTGCCTTGA+TGG 0.270614 4_2:-54179964 None:intergenic
TCCATTGGACTAAAATTTAC+AGG 0.273977 4_2:+54177573 Msa0607390:CDS
ATTGGGCATCAAAGAGGTTT+TGG 0.289119 4_2:-54180533 None:intergenic
GTGGCGCTCCATTGTTCTTT+AGG 0.292675 4_2:-54180407 None:intergenic
TTCTATGTTGGAACCTTTAA+GGG 0.304709 4_2:-54180052 None:intergenic
CATAGGGTGTCACATACTTT+TGG 0.328516 4_2:-54180143 None:intergenic
TCAATAGCTCCGGGTCTCTT+AGG 0.330851 4_2:-54180714 None:intergenic
GACCCAATTTGTAGCTTGAT+TGG 0.339546 4_2:-54180121 None:intergenic
GCATGGCAGTGGCAATGTAC+TGG 0.346712 4_2:-54180230 None:intergenic
TACTGGGCTTCATTGTCATT+AGG 0.366506 4_2:-54180213 None:intergenic
TATATACTTGGTTTATACTT+TGG 0.378699 4_2:+54177474 Msa0607390:five_prime_UTR
ACGCTGCTCTTGAGAAAGTT+GGG 0.379600 4_2:+54180568 Msa0607390:CDS
GGATGATCCTCCAACCAATA+AGG 0.395454 4_2:-54177360 None:intergenic
CTATTCCTAGTACTATTTGC+AGG 0.399383 4_2:-54177381 None:intergenic
CTTGAAGGGCTTGTTCGTCT+GGG 0.403107 4_2:-54180029 None:intergenic
GAGTCTTCCTTATTGGTTGG+AGG 0.408209 4_2:+54177353 Msa0607390:five_prime_UTR
GTGGATGGCCATCGGAAGGC+GGG 0.410865 4_2:+54180622 Msa0607390:CDS
TTGATCAATCACGTCAAGAA+TGG 0.432895 4_2:+54180687 Msa0607390:CDS
CAACAAGGAAACAATGAAGT+TGG 0.438007 4_2:+54180507 Msa0607390:CDS
TACGCTGCTCTTGAGAAAGT+TGG 0.441895 4_2:+54180567 Msa0607390:CDS
GTTGTAAATATTGTTTAGCT+TGG 0.446199 4_2:-54180371 None:intergenic
TGGAACCTTTAAGGGCTTGA+AGG 0.446944 4_2:-54180044 None:intergenic
TGATATTTAGATGATTTGTC+AGG 0.458349 4_2:-54180813 None:intergenic
CAAGTAAGTCTCAATAGCTC+CGG 0.459135 4_2:-54180724 None:intergenic
AATTCATATCCACCTAATGA+TGG 0.459747 4_2:+54180336 Msa0607390:CDS
CATGGCAGTGGCAATGTACT+GGG 0.461472 4_2:-54180229 None:intergenic
ATCAAAGCTGCATATATACT+TGG 0.465869 4_2:+54177462 Msa0607390:five_prime_UTR
GTGGATTTATATAAGTCAAA+TGG 0.466757 4_2:+54179982 Msa0607390:CDS
TCAAAGGAAAATTAATGCTA+TGG 0.473337 4_2:-54177313 None:intergenic
TCAGAGTCTTCCTTATTGGT+TGG 0.473569 4_2:+54177350 Msa0607390:five_prime_UTR
GAGAGAAGAAAGGGTTTCCT+TGG 0.473937 4_2:-54180091 None:intergenic
TTCCGATGGCCATCCACTCT+CGG 0.475708 4_2:-54180616 None:intergenic
ATTTCATCTGCAAATTTACA+AGG 0.482621 4_2:+54180270 Msa0607390:CDS
AGCGTATACTGAGTCTAATT+GGG 0.488716 4_2:-54180550 None:intergenic
GCATATAAATATGGACTAGC+AGG 0.489578 4_2:+54177427 Msa0607390:five_prime_UTR
CTTGTTGGTATACTGTCCAT+TGG 0.493070 4_2:+54177558 Msa0607390:CDS
TCAGTGAAAACACCATCATT+AGG 0.495646 4_2:-54180348 None:intergenic
TGATCAATCACGTCAAGAAT+GGG 0.496832 4_2:+54180688 Msa0607390:CDS
TGCCAATCAAGCTACAAATT+GGG 0.500599 4_2:+54180119 Msa0607390:CDS
AACAAGGAAACAATGAAGTT+GGG 0.501730 4_2:+54180508 Msa0607390:CDS
AATAGTACTAGGAATAGTAT+TGG 0.502014 4_2:+54177387 Msa0607390:five_prime_UTR
GGAGTTTGCTATGGAATGCT+TGG 0.503294 4_2:+54179931 Msa0607390:CDS
AAAATCAAGTACATCAGTGT+TGG 0.515246 4_2:+54180177 Msa0607390:CDS
GGCATCTGTGAGAGAAGAAA+GGG 0.523286 4_2:-54180100 None:intergenic
ACCATCAAGGCAAGAAGTTG+TGG 0.524431 4_2:+54179963 Msa0607390:CDS
GGAACCTTTAAGGGCTTGAA+GGG 0.527762 4_2:-54180043 None:intergenic
GCACTATCCCCGCCTTCCGA+TGG 0.531293 4_2:-54180630 None:intergenic
TTATCTTTATAAGCGATGTA+CGG 0.538117 4_2:-54180447 None:intergenic
ATCATCCTGCAAATAGTACT+AGG 0.540969 4_2:+54177376 Msa0607390:five_prime_UTR
CGCTGCTCTTGAGAAAGTTG+GGG 0.541508 4_2:+54180569 Msa0607390:CDS
TGGCATCTGTGAGAGAAGAA+AGG 0.541551 4_2:-54180101 None:intergenic
TTGAAGGGCTTGTTCGTCTG+GGG 0.546385 4_2:-54180028 None:intergenic
ATCAAGGATCAATTCTATGT+TGG 0.547280 4_2:-54180064 None:intergenic
AAGTAAGTCTCAATAGCTCC+GGG 0.554259 4_2:-54180723 None:intergenic
TCATTATATACATAGAAAGA+TGG 0.557328 4_2:-54180931 None:intergenic
ATTGATCCTTGATGTGGCCA+AGG 0.559139 4_2:+54180074 Msa0607390:CDS
AGTGGATGGCCATCGGAAGG+CGG 0.559906 4_2:+54180621 Msa0607390:CDS
GGGTTTCCTTGGCCACATCA+AGG 0.566068 4_2:-54180080 None:intergenic
AAATTTACAAGGACAAATCA+AGG 0.572487 4_2:+54180281 Msa0607390:CDS
GTCCGAGAGTGGATGGCCAT+CGG 0.573233 4_2:+54180614 Msa0607390:CDS
TTTGATGAAAATCAGAAGAA+TGG 0.575433 4_2:+54180756 Msa0607390:CDS
TAGTTGTGTCCGAGAGTGGA+TGG 0.576028 4_2:+54180607 Msa0607390:CDS
AAAATGATAGACATGATCGA+TGG 0.578965 4_2:-54177531 None:intergenic
AGTCTAATTGGGCATCAAAG+AGG 0.581605 4_2:-54180539 None:intergenic
AAGATAGTTGTGTCCGAGAG+TGG 0.586296 4_2:+54180603 Msa0607390:CDS
TGGATGGCCATCGGAAGGCG+GGG 0.589764 4_2:+54180623 Msa0607390:CDS
ATAGACTTCCTAAAGAACAA+TGG 0.595560 4_2:+54180399 Msa0607390:CDS
GAGCCCCGTCAATCACTCAA+AGG 0.596330 4_2:-54177329 None:intergenic
GAGAGTGGATGGCCATCGGA+AGG 0.597361 4_2:+54180618 Msa0607390:CDS
GGATACACATTGGCAAGAAG+TGG 0.604193 4_2:-54180426 None:intergenic
CAATCCGTAGGAGTTTGCTA+TGG 0.608807 4_2:+54179922 Msa0607390:CDS
TACGCAGTTGTGCAATCCGT+AGG 0.619675 4_2:+54179910 Msa0607390:intron
TTGGCAATAATCTACCATCA+AGG 0.619775 4_2:+54179950 Msa0607390:CDS
TATAAATATGGACTAGCAGG+TGG 0.619782 4_2:+54177430 Msa0607390:five_prime_UTR
CATAGAATTGATCCTTGATG+TGG 0.622652 4_2:+54180068 Msa0607390:CDS
CATTCCATAGCAAACTCCTA+CGG 0.625812 4_2:-54179926 None:intergenic
TGTGGAAGCATTATCAGTTG+AGG 0.636860 4_2:-54180652 None:intergenic
AATGGGACTCCTAAGAGACC+CGG 0.649769 4_2:+54180705 Msa0607390:CDS
GTGAAAACACCATCATTAGG+TGG 0.653737 4_2:-54180345 None:intergenic
AGCGATGTACGGATACACAT+TGG 0.667248 4_2:-54180436 None:intergenic
GCTGCTCTTGAGAAAGTTGG+GGG 0.679213 4_2:+54180570 Msa0607390:CDS
GGACACAACTATCTTCACAT+CGG 0.708430 4_2:-54180595 None:intergenic
TTTCCTTTGAGTGATTGACG+GGG 0.765605 4_2:+54177326 Msa0607390:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATGCATATAAATA+TGG + chr4_2:54177418-54177437 Msa0607390:five_prime_UTR 10.0%
!!! GTTTATATATTTTTATATCT+AGG + chr4_2:54177629-54177648 Msa0607390:intron 10.0%
!!! TTTTTGTATATATTACTTAT+AGG + chr4_2:54178370-54178389 Msa0607390:intron 10.0%
!!! TTTTGTATATATTACTTATA+GGG + chr4_2:54178371-54178390 Msa0607390:intron 10.0%
!! TATTCAAATAGAATTATAAT+TGG - chr4_2:54178434-54178453 None:intergenic 10.0%
!! GATATATTTAATATTTATGT+AGG + chr4_2:54178655-54178674 Msa0607390:intron 10.0%
!! GTAATATTTAATATTTATGT+AGG + chr4_2:54178825-54178844 Msa0607390:intron 10.0%
!! TTCAAAAAAAATATTTATGT+AGG + chr4_2:54178854-54178873 Msa0607390:intron 10.0%
!!! TTTTATTTTCCTTAAAAAAA+AGG + chr4_2:54179218-54179237 Msa0607390:intron 10.0%
!!! AAAAAAATACCTTTTTTTTA+AGG - chr4_2:54179230-54179249 None:intergenic 10.0%
!!! TTTTTTATATAGTATAACAT+GGG - chr4_2:54179744-54179763 None:intergenic 10.0%
!!! TTTTTTTATATAGTATAACA+TGG - chr4_2:54179745-54179764 None:intergenic 10.0%
!!! AAAAAACTCTTAATTTTTAT+TGG + chr4_2:54179759-54179778 Msa0607390:intron 10.0%
!! AAAAAAAAAAATGTATAGAG+TGG - chr4_2:54177778-54177797 None:intergenic 15.0%
!!! GCTAATCTATTTTTTTTTTA+CGG + chr4_2:54177947-54177966 Msa0607390:intron 15.0%
!!! TTTATTTTCATTAACTTACT+TGG - chr4_2:54178226-54178245 None:intergenic 15.0%
!!! AATTGTAAATTCTAAAGTTT+AGG - chr4_2:54178620-54178639 None:intergenic 15.0%
!!! TGTTTCTATATCATATTTTT+AGG + chr4_2:54178680-54178699 Msa0607390:intron 15.0%
!! TTAAATATTACTCTCATAAT+TGG - chr4_2:54178816-54178835 None:intergenic 15.0%
!! TTAAAGTAAAAAATTGTGTT+TGG - chr4_2:54179683-54179702 None:intergenic 15.0%
!!! ATATCATATATTGTTACTTA+TGG + chr4_2:54180968-54180987 Msa0607390:three_prime_UTR 15.0%
!! TATATACTTGGTTTATACTT+TGG + chr4_2:54177474-54177493 Msa0607390:five_prime_UTR 20.0%
!!! TAGTAATGTAACTTTTTGAA+AGG + chr4_2:54177909-54177928 Msa0607390:intron 20.0%
!!! GGAGTTAAGTATATATTTTA+AGG + chr4_2:54177968-54177987 Msa0607390:intron 20.0%
!! AAAAAATAACAATTCACCTT+TGG - chr4_2:54178145-54178164 None:intergenic 20.0%
!! TATTAAGCTTCGTTATTATA+AGG - chr4_2:54178201-54178220 None:intergenic 20.0%
!!! ATCTTTTTTTTTTTTGGTCT+AGG + chr4_2:54178494-54178513 Msa0607390:intron 20.0%
!!! TTCTACTTTTTTTTTTTGGA+AGG - chr4_2:54178597-54178616 None:intergenic 20.0%
!!! TAGGTTCTACTTTTTTTTTT+TGG - chr4_2:54178601-54178620 None:intergenic 20.0%
!! TGTGTAACTTCAATAAAATA+AGG + chr4_2:54178748-54178767 Msa0607390:intron 20.0%
!!! TATGTAGGAGTAATATTTTA+CGG + chr4_2:54178869-54178888 Msa0607390:intron 20.0%
!!! GATCAAATTTTGATAATATG+TGG - chr4_2:54180673-54180692 None:intergenic 20.0%
!! TCATTATATACATAGAAAGA+TGG - chr4_2:54180934-54180953 None:intergenic 20.0%
! TCAAAGGAAAATTAATGCTA+TGG - chr4_2:54177316-54177335 None:intergenic 25.0%
! AATAGTACTAGGAATAGTAT+TGG + chr4_2:54177387-54177406 Msa0607390:five_prime_UTR 25.0%
!!! TCTATCATTTTTCTACTTGT+TGG + chr4_2:54177543-54177562 Msa0607390:CDS 25.0%
!!! ATTTTAAGGTGCATCTAATA+TGG + chr4_2:54177982-54178001 Msa0607390:intron 25.0%
!!! CACTTTGAACTATTTTTAAG+AGG - chr4_2:54178009-54178028 None:intergenic 25.0%
! TGGAAGGAAATAAAAAGTTT+AGG - chr4_2:54178581-54178600 None:intergenic 25.0%
! ACTTACAATTCTGAATTTGT+AGG + chr4_2:54179321-54179340 Msa0607390:intron 25.0%
! TTGTAGGTTACTTGTATTAT+AGG + chr4_2:54179337-54179356 Msa0607390:intron 25.0%
!! TGAAAAAGTATACGTTAAGA+TGG + chr4_2:54179369-54179388 Msa0607390:intron 25.0%
! GAAAAAAATTGTTAGCAAGT+TGG - chr4_2:54179406-54179425 None:intergenic 25.0%
! AAGCAAGTGTATTTATAAAG+AGG + chr4_2:54179455-54179474 Msa0607390:intron 25.0%
! GTGGATTTATATAAGTCAAA+TGG + chr4_2:54179982-54180001 Msa0607390:CDS 25.0%
!! ATTTTTACATCTTGAGCATA+GGG - chr4_2:54180162-54180181 None:intergenic 25.0%
! ATTTCATCTGCAAATTTACA+AGG + chr4_2:54180270-54180289 Msa0607390:CDS 25.0%
! AAATTTACAAGGACAAATCA+AGG + chr4_2:54180281-54180300 Msa0607390:CDS 25.0%
! GTTGTAAATATTGTTTAGCT+TGG - chr4_2:54180374-54180393 None:intergenic 25.0%
!! TTCTTTAGGAAGTCTATTAT+TGG - chr4_2:54180396-54180415 None:intergenic 25.0%
! TTATCTTTATAAGCGATGTA+CGG - chr4_2:54180450-54180469 None:intergenic 25.0%
!! TATGCTCTTTTTAAACAACA+AGG + chr4_2:54180492-54180511 Msa0607390:CDS 25.0%
! TTTGATGAAAATCAGAAGAA+TGG + chr4_2:54180756-54180775 Msa0607390:CDS 25.0%
!! TGATATTTAGATGATTTGTC+AGG - chr4_2:54180816-54180835 None:intergenic 25.0%
! ATTTTCCTTTGAGTGATTGA+CGG + chr4_2:54177324-54177343 Msa0607390:five_prime_UTR 30.0%
ATCAAAGCTGCATATATACT+TGG + chr4_2:54177462-54177481 Msa0607390:five_prime_UTR 30.0%
AAAATGATAGACATGATCGA+TGG - chr4_2:54177534-54177553 None:intergenic 30.0%
TCCATTGGACTAAAATTTAC+AGG + chr4_2:54177573-54177592 Msa0607390:CDS 30.0%
!! ACCTGTAAATTTTAGTCCAA+TGG - chr4_2:54177577-54177596 None:intergenic 30.0%
!! CTTTTTGAAAGGATGTAAAG+TGG + chr4_2:54177920-54177939 Msa0607390:intron 30.0%
TTAATAGTGAAGTCCACATT+TGG + chr4_2:54178112-54178131 Msa0607390:intron 30.0%
TTGAAGTTACACATCCTTAA+GGG - chr4_2:54178741-54178760 None:intergenic 30.0%
ATTGAAGTTACACATCCTTA+AGG - chr4_2:54178742-54178761 None:intergenic 30.0%
AAATTATTGTGTCCCTTGAA+CGG - chr4_2:54178792-54178811 None:intergenic 30.0%
! GTAATATTTTACGGTGTAAG+TGG + chr4_2:54178878-54178897 Msa0607390:intron 30.0%
! CAAAGGCATACAAATAAAGT+AGG + chr4_2:54179030-54179049 Msa0607390:intron 30.0%
GGTTACTTGTATTATAGGTT+AGG + chr4_2:54179342-54179361 Msa0607390:intron 30.0%
! AAAAGTATACGTTAAGATGG+AGG + chr4_2:54179372-54179391 Msa0607390:intron 30.0%
!! AGGTTAATGGTTAGTTTGTT+AGG - chr4_2:54179432-54179451 None:intergenic 30.0%
TATAAATACACTTGCTTGAG+AGG - chr4_2:54179452-54179471 None:intergenic 30.0%
ATCAGATATGTAGTCATTAC+TGG + chr4_2:54179490-54179509 Msa0607390:intron 30.0%
ATTAATTCAATTCACGTCAC+AGG - chr4_2:54179713-54179732 None:intergenic 30.0%
! TTGCAAACGACAAATTTTAG+GGG - chr4_2:54179865-54179884 None:intergenic 30.0%
! GTTGCAAACGACAAATTTTA+GGG - chr4_2:54179866-54179885 None:intergenic 30.0%
! TGTTGCAAACGACAAATTTT+AGG - chr4_2:54179867-54179886 None:intergenic 30.0%
TTCTATGTTGGAACCTTTAA+GGG - chr4_2:54180055-54180074 None:intergenic 30.0%
ATTCTATGTTGGAACCTTTA+AGG - chr4_2:54180056-54180075 None:intergenic 30.0%
ATCAAGGATCAATTCTATGT+TGG - chr4_2:54180067-54180086 None:intergenic 30.0%
! GATTTTTACATCTTGAGCAT+AGG - chr4_2:54180163-54180182 None:intergenic 30.0%
AAAATCAAGTACATCAGTGT+TGG + chr4_2:54180177-54180196 Msa0607390:CDS 30.0%
! TGCATTTTGAATGTTTTGCA+TGG - chr4_2:54180250-54180269 None:intergenic 30.0%
AATTCATATCCACCTAATGA+TGG + chr4_2:54180336-54180355 Msa0607390:CDS 30.0%
ATAGACTTCCTAAAGAACAA+TGG + chr4_2:54180399-54180418 Msa0607390:CDS 30.0%
AACAAGGAAACAATGAAGTT+GGG + chr4_2:54180508-54180527 Msa0607390:CDS 30.0%
! CTTCTGATTTTCATCAAACA+TGG - chr4_2:54180754-54180773 None:intergenic 30.0%
! TTTTCCTTTGAGTGATTGAC+GGG + chr4_2:54177325-54177344 Msa0607390:five_prime_UTR 35.0%
ATCATCCTGCAAATAGTACT+AGG + chr4_2:54177376-54177395 Msa0607390:five_prime_UTR 35.0%
CTATTCCTAGTACTATTTGC+AGG - chr4_2:54177384-54177403 None:intergenic 35.0%
!! GCATATAAATATGGACTAGC+AGG + chr4_2:54177427-54177446 Msa0607390:five_prime_UTR 35.0%
!! TATAAATATGGACTAGCAGG+TGG + chr4_2:54177430-54177449 Msa0607390:five_prime_UTR 35.0%
AATTATTGTGTCCCTTGAAC+GGG - chr4_2:54178791-54178810 None:intergenic 35.0%
ACAATTGACGAGACAATCAA+AGG + chr4_2:54179013-54179032 Msa0607390:intron 35.0%
AATAATTGTCCAAAGTGAGC+TGG - chr4_2:54179276-54179295 None:intergenic 35.0%
ATGATACACATGTGCAAGTA+AGG - chr4_2:54179840-54179859 None:intergenic 35.0%
TTGGCAATAATCTACCATCA+AGG + chr4_2:54179950-54179969 Msa0607390:CDS 35.0%
CATAGAATTGATCCTTGATG+TGG + chr4_2:54180068-54180087 Msa0607390:CDS 35.0%
ATGCCAATCAAGCTACAAAT+TGG + chr4_2:54180118-54180137 Msa0607390:CDS 35.0%
TGCCAATCAAGCTACAAATT+GGG + chr4_2:54180119-54180138 Msa0607390:CDS 35.0%
TCAGTGAAAACACCATCATT+AGG - chr4_2:54180351-54180370 None:intergenic 35.0%
CAACAAGGAAACAATGAAGT+TGG + chr4_2:54180507-54180526 Msa0607390:CDS 35.0%
AGCGTATACTGAGTCTAATT+GGG - chr4_2:54180553-54180572 None:intergenic 35.0%
TTGATCAATCACGTCAAGAA+TGG + chr4_2:54180687-54180706 Msa0607390:CDS 35.0%
TGATCAATCACGTCAAGAAT+GGG + chr4_2:54180688-54180707 Msa0607390:CDS 35.0%
! GAAGCAACTGAACAACATTT+TGG + chr4_2:54180780-54180799 Msa0607390:CDS 35.0%
TTTCCTTTGAGTGATTGACG+GGG + chr4_2:54177326-54177345 Msa0607390:five_prime_UTR 40.0%
TCAGAGTCTTCCTTATTGGT+TGG + chr4_2:54177350-54177369 Msa0607390:five_prime_UTR 40.0%
CTTGTTGGTATACTGTCCAT+TGG + chr4_2:54177558-54177577 Msa0607390:CDS 40.0%
TAACAATTCACCTTTGGACC+CGG - chr4_2:54178139-54178158 None:intergenic 40.0%
ACACTTATGAGGTAGGTGAA+TGG - chr4_2:54178709-54178728 None:intergenic 40.0%
GAACGGGAGAGATAATCATT+TGG - chr4_2:54178775-54178794 None:intergenic 40.0%
ATGATTATCTCTCCCGTTCA+AGG + chr4_2:54178776-54178795 Msa0607390:intron 40.0%
TGATTATCTCTCCCGTTCAA+GGG + chr4_2:54178777-54178796 Msa0607390:intron 40.0%
! TCAACCGACATTTTGCTCAA+GGG + chr4_2:54178946-54178965 Msa0607390:intron 40.0%
CATTCCCTTGAGCAAAATGT+CGG - chr4_2:54178953-54178972 None:intergenic 40.0%
! ATTTGAAGTCCAGCTCACTT+TGG + chr4_2:54179264-54179283 Msa0607390:intron 40.0%
ACACTTGCTTGAGAGGTTAA+TGG - chr4_2:54179445-54179464 None:intergenic 40.0%
GTGCAAGTAAGGTAACAACA+CGG - chr4_2:54179829-54179848 None:intergenic 40.0%
CATTCCATAGCAAACTCCTA+CGG - chr4_2:54179929-54179948 None:intergenic 40.0%
GACCCAATTTGTAGCTTGAT+TGG - chr4_2:54180124-54180143 None:intergenic 40.0%
!! CATAGGGTGTCACATACTTT+TGG - chr4_2:54180146-54180165 None:intergenic 40.0%
TACTGGGCTTCATTGTCATT+AGG - chr4_2:54180216-54180235 None:intergenic 40.0%
! TTGAATGTTTTGCATGGCAG+TGG - chr4_2:54180244-54180263 None:intergenic 40.0%
GTGAAAACACCATCATTAGG+TGG - chr4_2:54180348-54180367 None:intergenic 40.0%
! ATTGGGCATCAAAGAGGTTT+TGG - chr4_2:54180536-54180555 None:intergenic 40.0%
AGTCTAATTGGGCATCAAAG+AGG - chr4_2:54180542-54180561 None:intergenic 40.0%
CAGCGTATACTGAGTCTAAT+TGG - chr4_2:54180554-54180573 None:intergenic 40.0%
GGACACAACTATCTTCACAT+CGG - chr4_2:54180598-54180617 None:intergenic 40.0%
!! TGTGGAAGCATTATCAGTTG+AGG - chr4_2:54180655-54180674 None:intergenic 40.0%
AAGTAAGTCTCAATAGCTCC+GGG - chr4_2:54180726-54180745 None:intergenic 40.0%
CAAGTAAGTCTCAATAGCTC+CGG - chr4_2:54180727-54180746 None:intergenic 40.0%
! GAGTCTTCCTTATTGGTTGG+AGG + chr4_2:54177353-54177372 Msa0607390:five_prime_UTR 45.0%
GGATGATCCTCCAACCAATA+AGG - chr4_2:54177363-54177382 None:intergenic 45.0%
AGTGAAGTCCACATTTGGAC+CGG + chr4_2:54178117-54178136 Msa0607390:intron 45.0%
TCACCTACCTCATAAGTGTG+AGG + chr4_2:54178710-54178729 Msa0607390:intron 45.0%
! GTCAACCGACATTTTGCTCA+AGG + chr4_2:54178945-54178964 Msa0607390:intron 45.0%
GGGAATGCAAATTCGTGTAG+AGG + chr4_2:54178966-54178985 Msa0607390:intron 45.0%
!! CAATCCGTAGGAGTTTGCTA+TGG + chr4_2:54179922-54179941 Msa0607390:CDS 45.0%
!! GGAGTTTGCTATGGAATGCT+TGG + chr4_2:54179931-54179950 Msa0607390:CDS 45.0%
ACCATCAAGGCAAGAAGTTG+TGG + chr4_2:54179963-54179982 Msa0607390:CDS 45.0%
TCCACAACTTCTTGCCTTGA+TGG - chr4_2:54179967-54179986 None:intergenic 45.0%
! GGAACCTTTAAGGGCTTGAA+GGG - chr4_2:54180046-54180065 None:intergenic 45.0%
! TGGAACCTTTAAGGGCTTGA+AGG - chr4_2:54180047-54180066 None:intergenic 45.0%
ATTGATCCTTGATGTGGCCA+AGG + chr4_2:54180074-54180093 Msa0607390:CDS 45.0%
GAGAGAAGAAAGGGTTTCCT+TGG - chr4_2:54180094-54180113 None:intergenic 45.0%
GGCATCTGTGAGAGAAGAAA+GGG - chr4_2:54180103-54180122 None:intergenic 45.0%
TGGCATCTGTGAGAGAAGAA+AGG - chr4_2:54180104-54180123 None:intergenic 45.0%
GGATACACATTGGCAAGAAG+TGG - chr4_2:54180429-54180448 None:intergenic 45.0%
AGCGATGTACGGATACACAT+TGG - chr4_2:54180439-54180458 None:intergenic 45.0%
TACGCTGCTCTTGAGAAAGT+TGG + chr4_2:54180567-54180586 Msa0607390:CDS 45.0%
ACGCTGCTCTTGAGAAAGTT+GGG + chr4_2:54180568-54180587 Msa0607390:CDS 45.0%
AAGATAGTTGTGTCCGAGAG+TGG + chr4_2:54180603-54180622 Msa0607390:CDS 45.0%
!!! AATTGTTATTTTTTTTTTTT+TGG + chr4_2:54178151-54178170 Msa0607390:intron 5.0%
!!! TATTTAATCTTTTTTTTTTT+TGG + chr4_2:54178488-54178507 Msa0607390:intron 5.0%
GGGCTCAGAGTCTTCCTTAT+TGG + chr4_2:54177346-54177365 Msa0607390:five_prime_UTR 50.0%
GTGAAGTCCACATTTGGACC+GGG + chr4_2:54178118-54178137 Msa0607390:intron 50.0%
AGGCCTCACACTTATGAGGT+AGG - chr4_2:54178716-54178735 None:intergenic 50.0%
GTTACACATCCTTAAGGGCG+AGG - chr4_2:54178736-54178755 None:intergenic 50.0%
TACGCAGTTGTGCAATCCGT+AGG + chr4_2:54179910-54179929 Msa0607390:intron 50.0%
! TTGAAGGGCTTGTTCGTCTG+GGG - chr4_2:54180031-54180050 None:intergenic 50.0%
! CTTGAAGGGCTTGTTCGTCT+GGG - chr4_2:54180032-54180051 None:intergenic 50.0%
CAAGCCCTTCAAGCCCTTAA+AGG + chr4_2:54180039-54180058 Msa0607390:CDS 50.0%
CATGGCAGTGGCAATGTACT+GGG - chr4_2:54180232-54180251 None:intergenic 50.0%
GTGGCGCTCCATTGTTCTTT+AGG - chr4_2:54180410-54180429 None:intergenic 50.0%
CGCTGCTCTTGAGAAAGTTG+GGG + chr4_2:54180569-54180588 Msa0607390:CDS 50.0%
GCTGCTCTTGAGAAAGTTGG+GGG + chr4_2:54180570-54180589 Msa0607390:CDS 50.0%
TAGTTGTGTCCGAGAGTGGA+TGG + chr4_2:54180607-54180626 Msa0607390:CDS 50.0%
AATGGGACTCCTAAGAGACC+CGG + chr4_2:54180705-54180724 Msa0607390:CDS 50.0%
TCAATAGCTCCGGGTCTCTT+AGG - chr4_2:54180717-54180736 None:intergenic 50.0%
GAGCCCCGTCAATCACTCAA+AGG - chr4_2:54177332-54177351 None:intergenic 55.0%
CTTTGGACCCGGTCCAAATG+TGG - chr4_2:54178128-54178147 None:intergenic 55.0%
CACATTTGGACCGGGTCCAA+AGG + chr4_2:54178126-54178145 Msa0607390:intron 55.0%
! GCTTGAAGGGCTTGTTCGTC+TGG - chr4_2:54180033-54180052 None:intergenic 55.0%
GGGTTTCCTTGGCCACATCA+AGG - chr4_2:54180083-54180102 None:intergenic 55.0%
GCATGGCAGTGGCAATGTAC+TGG - chr4_2:54180233-54180252 None:intergenic 55.0%
TTCCGATGGCCATCCACTCT+CGG - chr4_2:54180619-54180638 None:intergenic 55.0%
GGCGAGGCCTCACACTTATG+AGG - chr4_2:54178720-54178739 None:intergenic 60.0%
AGTGTGAGGCCTCGCCCTTA+AGG + chr4_2:54178724-54178743 Msa0607390:intron 60.0%
GTCCGAGAGTGGATGGCCAT+CGG + chr4_2:54180614-54180633 Msa0607390:CDS 60.0%
GAGAGTGGATGGCCATCGGA+AGG + chr4_2:54180618-54180637 Msa0607390:CDS 60.0%
AGTGGATGGCCATCGGAAGG+CGG + chr4_2:54180621-54180640 Msa0607390:CDS 60.0%
GTGGATGGCCATCGGAAGGC+GGG + chr4_2:54180622-54180641 Msa0607390:CDS 65.0%
TGGATGGCCATCGGAAGGCG+GGG + chr4_2:54180623-54180642 Msa0607390:CDS 65.0%
GCACTATCCCCGCCTTCCGA+TGG - chr4_2:54180633-54180652 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 54177291 54180998 54177291 ID=Msa0607390;Name=Msa0607390
chr4_2 mRNA 54177291 54180998 54177291 ID=Msa0607390-mRNA-1;Parent=Msa0607390;Name=Msa0607390-mRNA-1;_AED=0.36;_eAED=0.36;_QI=249|1|1|1|0|0.5|2|147|329
chr4_2 exon 54177291 54177594 54177291 ID=Msa0607390-mRNA-1:exon:13546;Parent=Msa0607390-mRNA-1
chr4_2 exon 54179917 54180998 54179917 ID=Msa0607390-mRNA-1:exon:13547;Parent=Msa0607390-mRNA-1
chr4_2 five_prime_UTR 54177291 54177539 54177291 ID=Msa0607390-mRNA-1:five_prime_utr;Parent=Msa0607390-mRNA-1
chr4_2 CDS 54177540 54177594 54177540 ID=Msa0607390-mRNA-1:cds;Parent=Msa0607390-mRNA-1
chr4_2 CDS 54179917 54180851 54179917 ID=Msa0607390-mRNA-1:cds;Parent=Msa0607390-mRNA-1
chr4_2 three_prime_UTR 54180852 54180998 54180852 ID=Msa0607390-mRNA-1:three_prime_utr;Parent=Msa0607390-mRNA-1
Gene Sequence

>Msa0607390

ATGTCTATCATTTTTCTACTTGTTGGTATACTGTCCATTGGACTAAAATTTACAGTTGTGCAATCCGTAGGAGTTTGCTATGGAATGCTTGGCAATAATCTACCATCAAGGCAAGAAGTTGTGGATTTATATAAGTCAAATGGCATTGACAAAATGCGTATATACTCCCCAGACGAACAAGCCCTTCAAGCCCTTAAAGGTTCCAACATAGAATTGATCCTTGATGTGGCCAAGGAAACCCTTTCTTCTCTCACAGATGCCAATCAAGCTACAAATTGGGTCCAAAAGTATGTGACACCCTATGCTCAAGATGTAAAAATCAAGTACATCAGTGTTGGAAATGAAATTAAACCTAATGACAATGAAGCCCAGTACATTGCCACTGCCATGCAAAACATTCAAAATGCAATTTCATCTGCAAATTTACAAGGACAAATCAAGGTCTCAACAGCAATTGACATGACTTTGATTTTTAATTCATATCCACCTAATGATGGTGTTTTCACTGACCAAGCTAAACAATATTTACAACCAATAATAGACTTCCTAAAGAACAATGGAGCGCCACTTCTTGCCAATGTGTATCCGTACATCGCTTATAAAGATAATAAACAAAGCATTTCTCTTGACTATGCTCTTTTTAAACAACAAGGAAACAATGAAGTTGGGTACCAAAACCTCTTTGATGCCCAATTAGACTCAGTATACGCTGCTCTTGAGAAAGTTGGGGGTTCCGATGTGAAGATAGTTGTGTCCGAGAGTGGATGGCCATCGGAAGGCGGGGATAGTGCCTCAACTGATAATGCTTCCACATATTATCAAAATTTGATCAATCACGTCAAGAATGGGACTCCTAAGAGACCCGGAGCTATTGAGACTTACTTGTTTGCCATGTTTGATGAAAATCAGAAGAATGGTGAAGCAACTGAACAACATTTTGGTCTCTTTAATCCTGACAAATCATCTAAATATCAAACAAGTTTCAATTGA
Protein sequence

>Msa0607390

MSIIFLLVGILSIGLKFTVVQSVGVCYGMLGNNLPSRQEVVDLYKSNGIDKMRIYSPDEQALQALKGSNIELILDVAKETLSSLTDANQATNWVQKYVTPYAQDVKIKYISVGNEIKPNDNEAQYIATAMQNIQNAISSANLQGQIKVSTAIDMTLIFNSYPPNDGVFTDQAKQYLQPIIDFLKNNGAPLLANVYPYIAYKDNKQSISLDYALFKQQGNNEVGYQNLFDAQLDSVYAALEKVGGSDVKIVVSESGWPSEGGDSASTDNASTYYQNLINHVKNGTPKRPGAIETYLFAMFDENQKNGEATEQHFGLFNPDKSSKYQTSFN*