AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1277580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277580 MtrunA17_Chr8g0345971 96.266 723 26 1 1 722 39 761 0.0 1431
Msa1277580 MtrunA17_Chr1g0189251 82.158 723 125 3 1 723 39 757 0.0 1230
Msa1277580 MtrunA17_Chr8g0345991 68.810 731 201 8 1 719 38 753 0.0 1000
Msa1277580 MtrunA17_Chr2g0303881 70.702 727 196 8 1 719 8 725 0.0 992
Msa1277580 MtrunA17_Chr8g0345981 68.681 728 211 8 1 719 38 757 0.0 988
Msa1277580 MtrunA17_Chr7g0276151 66.804 726 229 7 1 722 41 758 0.0 965
Msa1277580 MtrunA17_Chr8g0345961 67.439 734 209 10 1 719 38 756 0.0 954
Msa1277580 MtrunA17_Chr1g0189561 51.639 732 329 12 1 720 43 761 0.0 718
Msa1277580 MtrunA17_Chr7g0248871 49.386 733 351 11 1 720 39 764 0.0 711
Msa1277580 MtrunA17_Chr7g0248861 49.493 592 274 13 1 575 39 622 0.0 559
Msa1277580 MtrunA17_Chr7g0248861 60.166 241 91 4 91 327 620 859 5.82e-85 286
Msa1277580 MtrunA17_Chr4g0037221 42.517 755 375 21 2 723 43 771 0.0 552
Msa1277580 MtrunA17_Chr2g0300751 40.344 756 401 14 2 723 37 776 1.86e-180 534
Msa1277580 MtrunA17_Chr7g0262161 41.622 752 374 18 4 720 40 761 4.06e-178 527
Msa1277580 MtrunA17_Chr1g0204321 39.281 751 408 16 2 722 47 779 9.52e-178 527
Msa1277580 MtrunA17_Chr4g0053781 40.811 740 394 13 1 720 40 755 1.26e-177 526
Msa1277580 MtrunA17_Chr5g0401511 41.588 743 381 15 1 718 45 759 9.42e-172 511
Msa1277580 MtrunA17_Chr4g0020651 41.655 737 387 14 1 717 41 754 7.44e-171 509
Msa1277580 MtrunA17_Chr8g0344971 41.161 758 376 19 2 723 40 763 4.30e-170 507
Msa1277580 MtrunA17_Chr4g0070391 40.704 710 371 18 40 717 58 749 2.16e-169 504
Msa1277580 MtrunA17_Chr8g0344331 42.213 732 371 21 24 717 55 772 1.01e-168 504
Msa1277580 MtrunA17_Chr1g0152771 40.830 747 388 17 1 717 38 760 2.51e-167 499
Msa1277580 MtrunA17_Chr4g0057061 39.513 739 371 19 8 719 85 774 7.38e-165 494
Msa1277580 MtrunA17_Chr7g0246461 40.112 713 351 14 35 719 75 739 5.23e-159 478
Msa1277580 MtrunA17_Chr3g0134621 40.135 740 370 15 1 717 44 733 3.25e-157 473
Msa1277580 MtrunA17_Chr4g0076611 39.612 722 367 18 40 720 1 694 1.37e-151 457
Msa1277580 MtrunA17_Chr5g0407701 39.745 707 376 19 41 721 69 751 7.86e-151 457
Msa1277580 MtrunA17_Chr5g0398241 39.054 740 378 20 9 722 64 756 6.75e-149 452
Msa1277580 MtrunA17_Chr3g0120521 39.499 719 372 19 40 719 75 769 7.33e-149 452
Msa1277580 MtrunA17_Chr5g0398351 40.299 737 367 19 9 719 815 1504 1.68e-147 467
Msa1277580 MtrunA17_Chr5g0398351 38.723 736 379 18 9 719 45 733 2.30e-142 453
Msa1277580 MtrunA17_Chr5g0398401 38.806 737 378 20 9 719 64 753 2.04e-147 448
Msa1277580 MtrunA17_Chr8g0377961 38.323 775 398 22 1 723 32 778 4.92e-147 448
Msa1277580 MtrunA17_Chr8g0369891 38.331 707 384 16 41 721 74 754 1.44e-146 446
Msa1277580 MtrunA17_Chr5g0398331 38.566 739 374 19 11 719 62 750 3.45e-146 445
Msa1277580 MtrunA17_Chr7g0250481 37.959 735 389 17 40 719 75 797 1.66e-144 442
Msa1277580 MtrunA17_Chr4g0057471 39.694 718 378 18 40 721 12 710 2.03e-144 439
Msa1277580 MtrunA17_Chr7g0250411 39.315 730 371 22 40 719 76 783 5.66e-144 441
Msa1277580 MtrunA17_Chr7g0250391 39.728 735 383 21 32 719 61 782 7.58e-143 437
Msa1277580 MtrunA17_Chr7g0250371 39.065 727 378 21 40 719 76 784 5.66e-142 435
Msa1277580 MtrunA17_Chr3g0136151 39.095 729 368 20 40 721 64 763 3.09e-141 432
Msa1277580 MtrunA17_Chr8g0354771 37.483 723 392 17 39 721 63 765 8.80e-141 431
Msa1277580 MtrunA17_Chr7g0227991 37.432 740 390 20 12 721 39 735 3.40e-138 424
Msa1277580 MtrunA17_Chr7g0250331 38.411 755 388 22 32 719 62 806 3.90e-137 423
Msa1277580 MtrunA17_Chr5g0398311 38.430 739 381 19 9 722 60 749 5.92e-137 421
Msa1277580 MtrunA17_Chr8g0351011 38.472 707 370 18 40 719 83 751 1.09e-136 420
Msa1277580 MtrunA17_Chr4g0057531 39.583 720 379 16 40 721 77 778 8.58e-136 419
Msa1277580 MtrunA17_Chr2g0285121 38.179 736 383 18 40 721 67 784 2.46e-135 417
Msa1277580 MtrunA17_Chr6g0470881 37.147 743 385 24 9 719 37 729 6.85e-135 415
Msa1277580 MtrunA17_Chr1g0146251 37.621 723 355 23 39 722 72 737 9.35e-135 415
Msa1277580 MtrunA17_Chr4g0026641 38.322 715 384 19 41 722 66 756 2.27e-134 414
Msa1277580 MtrunA17_Chr1g0146271 37.430 716 364 21 39 722 72 735 1.10e-132 409
Msa1277580 MtrunA17_Chr2g0285111 37.687 735 383 20 41 720 72 786 9.99e-131 405
Msa1277580 MtrunA17_Chr4g0057481 39.826 688 360 19 67 719 21 689 1.89e-130 402
Msa1277580 MtrunA17_Chr7g0266051 36.314 738 411 15 2 719 7 705 1.95e-130 402
Msa1277580 MtrunA17_Chr8g0334521 36.450 738 391 20 6 722 56 736 2.95e-130 403
Msa1277580 MtrunA17_Chr3g0143251 37.119 722 387 19 40 720 70 765 6.02e-130 403
Msa1277580 MtrunA17_Chr6g0470851 36.400 750 381 25 9 719 37 729 1.88e-129 401
Msa1277580 MtrunA17_Chr8g0334491 36.884 751 382 26 9 722 35 730 1.18e-128 399
Msa1277580 MtrunA17_Chr4g0057491 40.063 639 329 18 115 719 3 621 1.74e-128 395
Msa1277580 MtrunA17_Chr1g0170081 36.533 750 384 25 12 722 37 733 3.60e-128 397
Msa1277580 MtrunA17_Chr5g0423261 39.938 641 329 17 114 719 2 621 5.17e-127 391
Msa1277580 MtrunA17_Chr7g0246451 36.951 728 395 20 19 719 55 745 1.62e-126 394
Msa1277580 MtrunA17_Chr3g0079971 38.153 747 368 29 6 722 52 734 2.63e-125 390
Msa1277580 MtrunA17_Chr8g0354741 38.402 651 339 18 102 721 16 635 9.29e-125 385
Msa1277580 MtrunA17_Chr4g0057461 39.347 643 335 19 115 719 3 628 1.72e-122 379
Msa1277580 MtrunA17_Chr6g0480721 35.849 689 339 15 40 719 5 599 8.01e-120 372
Msa1277580 MtrunA17_Chr4g0057511 38.730 630 340 17 119 719 3 615 1.56e-115 361
Msa1277580 MtrunA17_Chr5g0439271 38.689 610 316 14 152 719 8 601 6.04e-113 353
Msa1277580 MtrunA17_Chr4g0071871 33.896 770 391 28 32 718 78 812 2.71e-102 332
Msa1277580 MtrunA17_Chr2g0298601 35.613 702 357 26 32 660 78 757 1.85e-98 322
Msa1277580 MtrunA17_Chr8g0376841 37.761 527 279 12 40 538 78 583 6.77e-95 306
Msa1277580 MtrunA17_Chr4g0075331 31.039 741 421 18 41 714 15 732 3.97e-94 308
Msa1277580 MtrunA17_Chr2g0301011 35.229 545 282 17 68 605 3 483 3.20e-86 280
Msa1277580 MtrunA17_Chr8g0380961 32.048 752 418 26 41 721 118 847 5.86e-85 286
Msa1277580 MtrunA17_Chr2g0302951 31.642 749 422 27 41 719 110 838 9.33e-81 275
Msa1277580 MtrunA17_Chr5g0447171 36.604 530 241 20 261 721 6 509 1.48e-76 255
Msa1277580 MtrunA17_Chr5g0418921 78.676 136 29 0 433 568 1 136 2.19e-69 225
Msa1277580 MtrunA17_Chr3g0143241 37.990 408 221 11 40 422 70 470 4.52e-69 236
Msa1277580 MtrunA17_Chr7g0250441 43.299 291 152 6 433 719 1 282 5.69e-68 226
Msa1277580 MtrunA17_Chr7g0261701 45.583 283 143 4 438 720 19 290 5.90e-68 225
Msa1277580 MtrunA17_Chr7g0250461 38.827 358 189 9 40 369 76 431 6.53e-64 221
Msa1277580 MtrunA17_Chr3g0097061 36.802 394 200 12 68 438 3 370 7.50e-64 219
Msa1277580 MtrunA17_Chr3g0097061 46.721 122 55 3 494 615 329 440 1.20e-24 107
Msa1277580 MtrunA17_Chr4g0035881 41.011 356 161 12 188 536 4 317 4.19e-59 202
Msa1277580 MtrunA17_Chr8g0346361 39.739 307 168 5 420 722 206 499 2.92e-58 205
Msa1277580 MtrunA17_Chr8g0346361 42.289 201 99 4 128 326 4 189 7.22e-40 154
Msa1277580 MtrunA17_Chr4g0026651 38.816 304 151 8 55 325 2 303 3.15e-56 194
Msa1277580 MtrunA17_Chr7g0261691 37.572 346 185 9 103 422 5 345 8.08e-56 194
Msa1277580 MtrunA17_Chr8g0346961 72.414 116 32 0 534 649 1 116 4.37e-53 179
Msa1277580 MtrunA17_Chr3g0105451 40.273 293 145 10 438 721 9 280 7.15e-53 184
Msa1277580 MtrunA17_Chr4g0026661 39.847 261 145 6 464 722 12 262 4.91e-49 173
Msa1277580 MtrunA17_Chr3g0105461 35.802 324 147 7 40 347 69 347 6.31e-48 173
Msa1277580 MtrunA17_Chr2g0301911 33.426 359 192 13 128 467 30 360 9.43e-46 167
Msa1277580 MtrunA17_Chr2g0312861 38.662 269 135 10 464 722 1 249 5.99e-44 160
Msa1277580 MtrunA17_Chr2g0301031 38.290 269 136 9 464 722 1 249 1.22e-42 155
Msa1277580 MtrunA17_Chr2g0312841 42.051 195 97 5 127 319 8 188 8.36e-39 142
Msa1277580 MtrunA17_Chr7g0248851 48.667 150 72 3 573 720 1 147 8.29e-38 138
Msa1277580 MtrunA17_Chr3g0103061 39.378 193 107 2 40 226 72 260 1.68e-37 140
Msa1277580 MtrunA17_Chr4g0071191 38.942 208 108 6 445 647 57 250 1.62e-35 135
Msa1277580 MtrunA17_Chr3g0103071 36.882 263 143 7 236 479 1 259 2.52e-35 135
Msa1277580 MtrunA17_Chr2g0301921 38.565 223 115 8 505 721 1 207 3.55e-34 129
Msa1277580 MtrunA17_Chr5g0436021 40.244 164 87 2 153 313 31 186 2.42e-30 118
Msa1277580 MtrunA17_Chr3g0142981 41.830 153 60 2 176 325 47 173 8.91e-28 111
Msa1277580 MtrunA17_Chr2g0301021 30.195 308 128 9 83 374 98 334 2.44e-26 111
Msa1277580 MtrunA17_Chr8g0376851 37.647 170 98 5 554 719 6 171 5.51e-24 99.4
Msa1277580 MtrunA17_Chr5g0436031 36.723 177 98 6 548 719 13 180 6.03e-22 95.1
Msa1277580 MtrunA17_Chr3g0103081 38.255 149 83 5 573 719 1 142 8.34e-21 89.4
Msa1277580 MtrunA17_Chr3g0143231 51.685 89 42 1 448 536 2 89 2.31e-18 80.5
Msa1277580 MtrunA17_Chr5g0398341 50.000 92 44 1 505 596 1 90 8.04e-18 79.3
Msa1277580 MtrunA17_Chr3g0143021 39.423 104 63 0 40 143 7 110 8.88e-18 79.7
Msa1277580 MtrunA17_Chr3g0142971 51.765 85 40 1 448 532 2 85 1.55e-17 78.2
Msa1277580 MtrunA17_Chr5g0439281 35.200 125 71 3 40 154 73 197 1.85e-15 75.5
Msa1277580 MtrunA17_Chr3g0143221 31.395 172 89 5 557 720 13 163 1.73e-14 72.0
Msa1277580 MtrunA17_Chr3g0142961 34.109 129 73 4 557 677 13 137 5.55e-14 69.7
Msa1277580 MtrunA17_Chr3g0077671 50.685 73 30 3 496 565 237 306 3.96e-13 70.9
Msa1277580 MtrunA17_Chr4g0035871 33.333 138 88 2 19 152 13 150 9.90e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277580 AT5G67090.1 46.164 730 321 18 2 708 35 715 0.0 591
Msa1277580 AT4G34980.1 41.467 750 388 17 1 723 37 762 0.0 554
Msa1277580 AT2G05920.1 41.835 741 373 14 2 717 40 747 0.0 540
Msa1277580 AT5G67360.1 41.845 748 374 13 1 720 41 755 1.00e-179 531
Msa1277580 AT3G14240.1 41.347 757 388 15 2 723 38 773 2.96e-175 521
Msa1277580 AT1G04110.1 39.628 752 402 15 3 721 40 772 4.42e-172 513
Msa1277580 AT1G01900.1 43.546 705 357 14 42 719 81 771 7.53e-171 509
Msa1277580 AT5G51750.1 39.224 747 414 14 1 722 46 777 5.27e-170 508
Msa1277580 AT3G14067.1 39.008 746 406 17 2 719 43 767 1.34e-169 506
Msa1277580 AT1G20160.2 40.192 729 374 19 32 720 17 723 1.18e-155 469
Msa1277580 AT1G20160.1 40.192 729 374 19 32 720 56 762 6.32e-155 468
Msa1277580 AT2G04160.1 39.118 726 370 19 40 721 75 772 2.60e-148 451
Msa1277580 AT4G10550.4 38.904 730 383 22 32 719 2 710 2.26e-136 419
Msa1277580 AT4G10550.2 38.904 730 383 22 32 719 2 710 2.26e-136 419
Msa1277580 AT4G10550.1 38.493 743 392 23 21 719 45 766 4.34e-136 420
Msa1277580 AT5G59810.1 38.419 721 376 18 40 721 85 776 4.53e-136 420
Msa1277580 AT4G10550.3 38.089 743 395 22 21 719 61 782 5.58e-136 420
Msa1277580 AT4G10540.1 38.493 743 393 22 21 719 41 763 1.03e-135 419
Msa1277580 AT5G03620.1 37.268 754 397 19 12 719 35 758 2.19e-133 412
Msa1277580 AT1G32940.4 38.806 737 375 22 32 719 2 711 4.44e-133 410
Msa1277580 AT1G32940.2 38.806 737 375 22 32 719 2 711 4.44e-133 410
Msa1277580 AT1G32940.1 38.400 750 384 23 21 719 40 762 5.15e-133 412
Msa1277580 AT1G32960.1 38.358 743 392 23 22 719 44 765 1.07e-132 411
Msa1277580 AT4G10510.2 37.203 715 393 18 40 719 1 694 1.12e-132 409
Msa1277580 AT5G45650.2 35.964 773 408 19 8 721 46 790 1.20e-132 411
Msa1277580 AT5G45650.1 35.964 773 408 19 8 721 46 790 1.20e-132 411
Msa1277580 AT4G10510.4 37.174 729 396 19 32 719 2 709 1.60e-132 409
Msa1277580 AT4G10510.1 36.792 742 405 20 21 719 33 753 1.84e-132 410
Msa1277580 AT4G10510.3 36.792 742 405 20 21 719 45 765 2.62e-132 410
Msa1277580 AT4G10520.1 37.158 732 400 20 21 719 40 744 4.95e-132 409
Msa1277580 AT1G66210.1 37.738 734 388 21 21 719 51 750 1.54e-131 407
Msa1277580 AT5G58840.1 38.986 690 358 20 39 719 71 706 2.70e-131 405
Msa1277580 AT5G58830.1 38.134 729 377 20 12 721 34 707 1.43e-130 403
Msa1277580 AT4G26330.2 38.149 713 396 21 40 719 21 721 5.49e-129 400
Msa1277580 AT1G20150.1 36.376 756 386 21 28 719 46 770 3.84e-128 399
Msa1277580 AT4G00230.1 36.864 708 383 18 39 719 73 743 5.83e-127 395
Msa1277580 AT5G59090.1 36.415 714 386 17 33 722 62 731 9.50e-126 392
Msa1277580 AT5G59090.2 36.275 714 382 17 33 722 62 726 1.08e-125 391
Msa1277580 AT5G59190.1 37.926 704 364 20 40 718 32 687 2.78e-125 389
Msa1277580 AT5G59090.3 36.555 714 383 18 33 722 62 729 3.26e-125 390
Msa1277580 AT4G26330.1 37.414 727 396 22 40 719 21 735 3.91e-125 390
Msa1277580 AT1G66220.1 34.711 726 418 18 21 719 48 744 8.02e-125 390
Msa1277580 AT5G59120.1 35.637 738 400 19 12 719 35 727 9.05e-125 389
Msa1277580 AT5G11940.1 35.440 728 416 21 22 719 49 752 6.18e-124 387
Msa1277580 AT4G21630.1 35.918 735 404 22 21 719 50 753 8.11e-124 387
Msa1277580 AT1G32950.2 37.860 729 392 22 32 719 2 710 7.07e-123 384
Msa1277580 AT1G32950.1 37.466 742 401 23 21 719 40 761 7.32e-123 385
Msa1277580 AT3G46850.1 36.671 709 388 20 34 719 64 734 9.74e-123 384
Msa1277580 AT3G46840.1 36.686 706 381 21 39 719 70 734 4.74e-122 382
Msa1277580 AT5G59100.1 35.172 725 379 18 34 719 65 737 4.03e-121 380
Msa1277580 AT4G21650.1 35.000 740 409 19 21 719 52 760 4.08e-121 380
Msa1277580 AT5G59130.3 36.351 707 372 20 39 719 32 686 8.80e-121 377
Msa1277580 AT4G21323.1 36.081 740 408 19 2 717 93 791 1.31e-120 380
Msa1277580 AT5G59130.4 35.453 739 394 21 12 719 39 725 2.26e-120 377
Msa1277580 AT5G59130.2 35.714 728 397 20 12 719 39 715 1.67e-119 375
Msa1277580 AT4G10530.1 35.102 735 402 19 21 719 40 735 1.91e-119 375
Msa1277580 AT4G21640.1 35.559 734 380 24 21 719 52 727 7.47e-119 374
Msa1277580 AT5G59130.1 35.318 739 391 22 12 719 39 721 2.44e-118 372
Msa1277580 AT5G58820.1 36.893 721 389 20 12 719 33 700 6.47e-118 370
Msa1277580 AT4G21326.1 36.056 710 412 14 32 721 2 689 7.31e-116 364
Msa1277580 AT4G15040.2 35.093 701 386 16 40 719 33 685 2.43e-109 347
Msa1277580 AT4G15040.1 35.093 701 386 16 40 719 33 685 2.43e-109 347
Msa1277580 AT5G45640.1 34.091 748 389 22 48 722 38 754 7.85e-108 345
Msa1277580 AT2G19170.1 34.505 768 390 29 32 718 74 809 4.75e-103 334
Msa1277580 AT2G19170.2 34.505 768 390 29 32 718 74 809 4.75e-103 334
Msa1277580 AT4G30020.3 34.474 760 402 27 32 718 74 810 5.63e-103 334
Msa1277580 AT4G30020.1 34.474 760 402 27 32 718 74 810 5.63e-103 334
Msa1277580 AT4G30020.4 34.474 760 402 27 32 718 74 810 5.63e-103 334
Msa1277580 AT4G30020.2 34.474 760 402 27 32 718 74 810 5.63e-103 334
Msa1277580 AT1G32940.3 39.138 580 287 19 21 552 40 601 1.22e-101 325
Msa1277580 AT5G03620.2 39.464 560 289 13 12 538 35 577 7.46e-101 322
Msa1277580 AT5G58840.3 40.159 503 254 14 39 536 71 531 9.00e-101 320
Msa1277580 AT2G39850.1 32.796 744 407 26 33 719 58 765 2.06e-100 326
Msa1277580 AT1G32970.1 38.772 570 303 14 177 719 172 722 2.56e-100 325
Msa1277580 AT1G30600.1 33.023 751 409 27 41 719 98 826 4.19e-94 311
Msa1277580 AT4G00230.2 38.697 522 274 13 39 538 73 570 7.73e-94 304
Msa1277580 AT4G20430.2 32.977 749 411 28 33 721 109 826 1.38e-92 306
Msa1277580 AT5G44530.1 32.932 747 414 26 41 719 106 833 1.83e-92 306
Msa1277580 AT4G20430.3 31.842 760 429 26 33 721 109 850 3.67e-91 303
Msa1277580 AT4G20430.1 31.842 760 429 26 33 721 109 850 3.67e-91 303
Msa1277580 AT1G62340.1 32.194 761 405 27 41 719 98 829 4.30e-90 300
Msa1277580 AT5G44530.2 32.124 772 412 27 41 719 106 858 7.04e-89 297
Msa1277580 AT1G20160.3 38.197 466 243 12 32 465 56 508 1.49e-85 281
Msa1277580 AT5G58840.2 37.355 431 225 12 39 465 71 460 1.55e-71 241
Msa1277580 AT5G44530.3 33.602 497 267 16 41 479 106 597 8.74e-61 216
Msa1277580 AT1G32980.1 45.026 191 95 4 501 688 3 186 2.59e-38 141
Msa1277580 AT5G59110.1 36.585 164 96 4 563 721 8 168 1.91e-20 89.7

Find 152 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCCTTTGTTGAAGAATT+TGG 0.093886 8_3:+13271017 None:intergenic
TAAGGTTATATTTGGATATT+TGG 0.094856 8_3:+13270990 None:intergenic
GCTTGGCATGATTCAAATTT+TGG 0.136864 8_3:-13271198 Msa1277580:CDS
TCTTTAAAGCTTTCGCTTTC+GGG 0.144438 8_3:+13271135 None:intergenic
TTTAAACCTAAGGTTATATT+TGG 0.162500 8_3:+13270982 None:intergenic
GAAAACAATTGGAACATTAT+TGG 0.203286 8_3:+13270477 None:intergenic
AACTGTGGCTGCTGGAACTA+TGG 0.205089 8_3:-13270581 Msa1277580:CDS
ATCTTTAAAGCTTTCGCTTT+CGG 0.224788 8_3:+13271134 None:intergenic
TTTATTGCATATTTCAATAA+TGG 0.246626 8_3:-13269620 Msa1277580:CDS
CCAGGGTCAAGTGCTCTATT+TGG 0.248129 8_3:+13269782 None:intergenic
TTGAGGGATTCATGTTCTTT+TGG 0.272557 8_3:+13271318 None:intergenic
TGTCCGAAATTCCTTCAAAA+TGG 0.279269 8_3:-13271104 Msa1277580:CDS
GTTTAATCGACACCGGAATT+TGG 0.289102 8_3:-13271158 Msa1277580:CDS
TGATTGCTCTGAGCCTTCTT+TGG 0.290881 8_3:-13269660 Msa1277580:CDS
AAAATGAAGAAAGTGGCTTT+TGG 0.302465 8_3:-13269404 Msa1277580:CDS
TAGCAATGTATAAAGCAATA+TGG 0.305959 8_3:-13270831 Msa1277580:CDS
TTGGATGAAGCAAAAGTTCT+TGG 0.316962 8_3:-13270352 Msa1277580:CDS
TATGCACCTGGAACAGCTTC+AGG 0.327934 8_3:-13270874 Msa1277580:CDS
TTGACTGCTTCTCCATTGAT+TGG 0.328555 8_3:+13270259 None:intergenic
TTCGCTTTCGGGCCAAATTC+CGG 0.333659 8_3:+13271146 None:intergenic
TCAGTGAATACCAACTTGTT+TGG 0.336055 8_3:+13269479 None:intergenic
ACATTTGCAGCTATGGAAAA+AGG 0.339315 8_3:-13270679 Msa1277580:CDS
CAGTGAATACCAACTTGTTT+GGG 0.345539 8_3:+13269480 None:intergenic
AAATGTTCCTGTGATGGATT+TGG 0.347365 8_3:-13270044 Msa1277580:CDS
TTTGATAAGTGGAACATCTA+TGG 0.353717 8_3:-13269993 Msa1277580:CDS
GCTATTCCTGAAGCTGTTCC+AGG 0.354864 8_3:+13270868 None:intergenic
TGAAAGGAGCACACGGTGAT+TGG 0.356416 8_3:-13269937 Msa1277580:CDS
TGTTACCATTTCCAAGTGTA+AGG 0.357177 8_3:+13270539 None:intergenic
AATGTTCCTGTGATGGATTT+GGG 0.372980 8_3:-13270043 Msa1277580:CDS
TAACTGTTCTATGAAATTCT+TGG 0.374058 8_3:+13269576 None:intergenic
ATGGGGTTGTCACTTTATAT+AGG 0.376143 8_3:-13270511 Msa1277580:CDS
CATAAACCCATGAAAACAAT+TGG 0.378794 8_3:+13270466 None:intergenic
TGGATGAAGCAAAAGTTCTT+GGG 0.380155 8_3:-13270351 Msa1277580:CDS
ATAATGGAAATTCTTCTTCA+AGG 0.380641 8_3:-13269604 Msa1277580:CDS
GATGTTCTTTCACTATCATT+TGG 0.382722 8_3:-13270745 Msa1277580:CDS
TCCACTTCAGCTGGTAATAG+TGG 0.387246 8_3:-13270646 Msa1277580:CDS
AACAAGTTCAATTTGATAAG+TGG 0.388291 8_3:-13270004 Msa1277580:CDS
ATGGCATGTCCTCATGTTGC+AGG 0.395406 8_3:-13269974 Msa1277580:CDS
TGGTGGGTTGTGAATACTTT+GGG 0.409019 8_3:+13271483 None:intergenic
AACTGTTCTATGAAATTCTT+GGG 0.410693 8_3:+13269577 None:intergenic
GCAAATGTTGCTATGGCAAC+AGG 0.411672 8_3:+13270694 None:intergenic
AAATATCCAAATATAACCTT+AGG 0.419204 8_3:-13270988 Msa1277580:CDS
CTTTGCAACAAGAAACTCAT+TGG 0.420955 8_3:-13271042 Msa1277580:CDS
TTGAAATATGCAATAAAAGA+AGG 0.421126 8_3:+13269626 None:intergenic
TCGAGTATTGCGACCACGAT+TGG 0.427269 8_3:+13269341 None:intergenic
GGGTTTATGTGACAATGTTA+AGG 0.427670 8_3:-13270452 Msa1277580:CDS
AAGCGCCTTTGTTGGGATTG+AGG 0.428372 8_3:+13271217 None:intergenic
TCTAGCATTACTCAGGTTGA+AGG 0.431224 8_3:-13269521 Msa1277580:CDS
ATTGGAGCCCTGCCGCGATT+CGG 0.433464 8_3:-13269919 Msa1277580:CDS
ATGTCAGGTTTCAAAACATA+TGG 0.439469 8_3:+13270106 None:intergenic
TCATGCCAAGCGCCTTTGTT+GGG 0.441963 8_3:+13271210 None:intergenic
CATAGCAACATTTGCAGCTA+TGG 0.447886 8_3:-13270686 Msa1277580:CDS
ATCATTGTTGATCCAATCAA+TGG 0.454770 8_3:-13270271 Msa1277580:CDS
CTTTGTTGGGATTGAGGCCG+AGG 0.459177 8_3:+13271223 None:intergenic
CATAGAACAGTTACCAATGT+TGG 0.459195 8_3:-13269566 Msa1277580:CDS
CCTGGTCTTATTTACGAGGT+TGG 0.462181 8_3:-13269764 Msa1277580:CDS
TATAAAGCAATATGGGATGT+TGG 0.463605 8_3:-13270823 Msa1277580:CDS
ACCTACACACATGTCATGAA+TGG 0.466745 8_3:-13271360 Msa1277580:CDS
AGCAATGTATAAAGCAATAT+GGG 0.472723 8_3:-13270830 Msa1277580:CDS
TTTGGCAACGACGTAATTGT+TGG 0.473697 8_3:-13271180 Msa1277580:CDS
CACACTTCATCAACAGCAGC+TGG 0.475543 8_3:-13270928 Msa1277580:CDS
TGGAAATGGTAACACAATCA+TGG 0.479561 8_3:-13270530 Msa1277580:CDS
GTACCAGGAGCAGTGATGTC+AGG 0.480347 8_3:+13270091 None:intergenic
GGAAATGGTAACACAATCAT+GGG 0.480569 8_3:-13270529 Msa1277580:CDS
ATCATGCCAAGCGCCTTTGT+TGG 0.489233 8_3:+13271209 None:intergenic
GGGACCCTTACACTTGGAAA+TGG 0.492845 8_3:-13270544 Msa1277580:CDS
GGTTGTGAATACTTTGGGCA+TGG 0.496439 8_3:+13271488 None:intergenic
TGGGTCATAACTGTGGCTGC+TGG 0.500125 8_3:-13270589 Msa1277580:CDS
GGTGCCAAATTCTTCAACAA+AGG 0.500831 8_3:-13271021 Msa1277580:CDS
TCCATCACAGGAACATTTGT+GGG 0.503984 8_3:+13270049 None:intergenic
TTCCATTGTGAAGAGTTTCA+AGG 0.507598 8_3:+13270617 None:intergenic
TGACCAGCTCCCAATGCAAA+AGG 0.509119 8_3:+13269812 None:intergenic
CATAGCTGCAAATGTTGCTA+TGG 0.514328 8_3:+13270687 None:intergenic
TTGTGAAGAGTTTCAAGGGC+AGG 0.514726 8_3:+13270622 None:intergenic
ATCCATCACAGGAACATTTG+TGG 0.515639 8_3:+13270048 None:intergenic
AAACCTGACATCACTGCTCC+TGG 0.518027 8_3:-13270094 Msa1277580:CDS
ATGCAGAGGAAAGAGTTGAT+AGG 0.524952 8_3:+13271451 None:intergenic
AAGGAGCATATTAAAGACAT+TGG 0.525407 8_3:-13269857 Msa1277580:CDS
TGTTTCTCCCTCACCAACAT+TGG 0.525851 8_3:+13269553 None:intergenic
ACCACTATTACCAGCTGAAG+TGG 0.526396 8_3:+13270645 None:intergenic
TGAAATATGCAATAAAAGAA+GGG 0.526670 8_3:+13269627 None:intergenic
TCTTCACAATGGAACACCTT+GGG 0.527475 8_3:-13270608 Msa1277580:CDS
ACGAGTGGAGTTTAAACCTA+AGG 0.528277 8_3:+13270972 None:intergenic
ACATATGGACAGCTATTTGA+AGG 0.529731 8_3:+13270121 None:intergenic
ATTGATTGGATCAACAATGA+TGG 0.534175 8_3:+13270273 None:intergenic
GAAATTCCTTCAAAATGGAA+TGG 0.534493 8_3:-13271099 Msa1277580:CDS
TTATGTTTCTAGCATTACTC+AGG 0.537982 8_3:-13269528 Msa1277580:CDS
CAGTGTTATCCCAAACAAGT+TGG 0.541444 8_3:-13269489 Msa1277580:CDS
GTGGTGGGTTGTGAATACTT+TGG 0.542068 8_3:+13271482 None:intergenic
TGATATTGCCGCGTCAATTG+CGG 0.543360 8_3:+13270777 None:intergenic
GGACATATTTGATAATACTA+AGG 0.543524 8_3:-13269876 Msa1277580:CDS
ACACATTCACCTCAGTTCCT+CGG 0.547201 8_3:-13271240 Msa1277580:CDS
TAAGAAGAAACACTAGGTGC+TGG 0.550269 8_3:+13270157 None:intergenic
CTAGCATTACTCAGGTTGAA+GGG 0.551958 8_3:-13269520 Msa1277580:CDS
TCAATCCCAACAAAGGCGCT+TGG 0.553508 8_3:-13271215 Msa1277580:CDS
TTTCAAGGGACCCTTACACT+TGG 0.555185 8_3:-13270550 Msa1277580:CDS
ACTCGTGATTCACATGGTCA+TGG 0.558237 8_3:-13270955 Msa1277580:CDS
CTCGTGATTCACATGGTCAT+GGG 0.559397 8_3:-13270954 Msa1277580:CDS
GAGCCCTGCCGCGATTCGGT+CGG 0.560337 8_3:-13269915 Msa1277580:CDS
TGTGTAGGTGTAAATTAACT+TGG 0.560814 8_3:+13271374 None:intergenic
TCCTCATGTTGCAGGTGTCG+CGG 0.564392 8_3:-13269966 Msa1277580:CDS
AGAAACTAAGCTACAAGTTG+AGG 0.565728 8_3:-13269448 Msa1277580:CDS
CTCTTCACAATGGAACACCT+TGG 0.570530 8_3:-13270609 Msa1277580:CDS
GGATGAAGCAAAAGTTCTTG+GGG 0.570976 8_3:-13270350 Msa1277580:CDS
AACAGTTACCAATGTTGGTG+AGG 0.572151 8_3:-13269561 Msa1277580:CDS
TCCATTGTGAAGAGTTTCAA+GGG 0.573601 8_3:+13270618 None:intergenic
GTTTCTTCTTATAGTTCAAG+AGG 0.574131 8_3:-13270145 Msa1277580:CDS
GGGTAGTTAAGATCCAAAGA+AGG 0.577977 8_3:+13269647 None:intergenic
GTTACCATTTCCAAGTGTAA+GGG 0.582166 8_3:+13270540 None:intergenic
TTTATGGATGAAATGTAGCC+TGG 0.585879 8_3:+13271288 None:intergenic
GCCCACAAATGTTCCTGTGA+TGG 0.589065 8_3:-13270050 Msa1277580:CDS
CCAACCTCGTAAATAAGACC+AGG 0.589846 8_3:+13269764 None:intergenic
TGATTCCCCAAATCCATCAC+AGG 0.589870 8_3:+13270037 None:intergenic
TTGCCGACCGAATCGCGGCA+GGG 0.595732 8_3:+13269912 None:intergenic
ATTGTTGGTTTAATCGACAC+CGG 0.596647 8_3:-13271165 Msa1277580:CDS
ACAGTTACCAATGTTGGTGA+GGG 0.598993 8_3:-13269560 Msa1277580:CDS
GTACAAATATCTTAGCTGCA+TGG 0.601561 8_3:-13270072 Msa1277580:CDS
ACTATGGATAGAGAATTTCA+AGG 0.601837 8_3:-13270565 Msa1277580:CDS
TTTCTTCTTATAGTTCAAGA+GGG 0.602199 8_3:-13270144 Msa1277580:CDS
GAATCCCTCAAAACTTCACC+AGG 0.602547 8_3:-13271306 Msa1277580:CDS
TGACCCTGGTCTTATTTACG+AGG 0.616598 8_3:-13269768 Msa1277580:CDS
TGATAGGTACCATGTGTGGT+GGG 0.617853 8_3:+13271467 None:intergenic
CCAAATAGAGCACTTGACCC+TGG 0.619594 8_3:-13269782 Msa1277580:CDS
GCCGCGACACCTGCAACATG+AGG 0.619878 8_3:+13269965 None:intergenic
TATTCACAACCCACCACACA+TGG 0.621569 8_3:-13271476 Msa1277580:CDS
GGATTGAGGCCGAGGAACTG+AGG 0.622508 8_3:+13271231 None:intergenic
CTCGGCCTCAATCCCAACAA+AGG 0.622891 8_3:-13271222 Msa1277580:CDS
TGTAATAGCCGCAATTGACG+CGG 0.623466 8_3:-13270785 Msa1277580:CDS
AACTCCACTCGTGATTCACA+TGG 0.628120 8_3:-13270961 Msa1277580:CDS
TTGATAGGTACCATGTGTGG+TGG 0.630431 8_3:+13271466 None:intergenic
GATTGTTGTGTGTGAAGACA+AGG 0.634590 8_3:-13270407 Msa1277580:CDS
GCCCTTGAAACTCTTCACAA+TGG 0.635593 8_3:-13270619 Msa1277580:CDS
CTATGGATAGAGAATTTCAA+GGG 0.637555 8_3:-13270564 Msa1277580:CDS
GCAGCCACAGTTATGACCCA+AGG 0.638203 8_3:+13270592 None:intergenic
ATTCGAAGAAGATCTTGTGA+TGG 0.644214 8_3:+13269682 None:intergenic
CATAATTGCCGACCGAATCG+CGG 0.646114 8_3:+13269907 None:intergenic
GCAGCTAAGATATTTGTACC+AGG 0.652313 8_3:+13270076 None:intergenic
ATGTTCCTGTGATGGATTTG+GGG 0.657697 8_3:-13270042 Msa1277580:CDS
GAACTATAAGAAGAAACACT+AGG 0.659947 8_3:+13270151 None:intergenic
ATGACCATGTGAATCACGAG+TGG 0.664091 8_3:+13270957 None:intergenic
TGTTTGGGATAACACTGACA+CGG 0.670435 8_3:+13269495 None:intergenic
GCAACAGGATCGTCATACAA+AGG 0.684200 8_3:+13270709 None:intergenic
ATTGACGCGGCAATATCAGA+CGG 0.693866 8_3:-13270772 Msa1277580:CDS
TGTGGTTAGAAGTCCAATCG+TGG 0.714853 8_3:-13269354 Msa1277580:CDS
ACCATTCATGACATGTGTGT+AGG 0.717093 8_3:+13271359 None:intergenic
GTCGGCAATTATGACAACGT+CGG 0.719253 8_3:-13269897 Msa1277580:CDS
AACACCTTGGGTCATAACTG+TGG 0.724927 8_3:-13270596 Msa1277580:CDS
CAACCTCGTAAATAAGACCA+GGG 0.729565 8_3:+13269765 None:intergenic
TTGGATGGATATGAAGCATG+TGG 0.729881 8_3:-13269372 Msa1277580:CDS
GAGTTGATAGGTACCATGTG+TGG 0.743214 8_3:+13271463 None:intergenic
GAAATGGTAACACAATCATG+GGG 0.745022 8_3:-13270528 Msa1277580:CDS
GTTGTGTGTGAAGACAAGGA+TGG 0.768733 8_3:-13270403 Msa1277580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTGCATATTTCAATAA+TGG - chr8_3:13271203-13271222 Msa1277580:CDS 15.0%
!! TTTATTGCATATTTCAATAA+TGG - chr8_3:13271203-13271222 Msa1277580:CDS 15.0%
!! TAAGGTTATATTTGGATATT+TGG + chr8_3:13269836-13269855 None:intergenic 20.0%
!! AAATATCCAAATATAACCTT+AGG - chr8_3:13269835-13269854 Msa1277580:CDS 20.0%
!! TTTAAACCTAAGGTTATATT+TGG + chr8_3:13269844-13269863 None:intergenic 20.0%
!!! AATTATCGACTTGATAAAAA+AGG + chr8_3:13270452-13270471 None:intergenic 20.0%
!!! TTTTTATCAAGTCGATAATT+TGG - chr8_3:13270452-13270471 Msa1277580:CDS 20.0%
!! TGAAATATGCAATAAAAGAA+GGG + chr8_3:13271199-13271218 None:intergenic 20.0%
!! TTGAAATATGCAATAAAAGA+AGG + chr8_3:13271200-13271219 None:intergenic 20.0%
!! TAAGGTTATATTTGGATATT+TGG + chr8_3:13269836-13269855 None:intergenic 20.0%
!! AAATATCCAAATATAACCTT+AGG - chr8_3:13269835-13269854 Msa1277580:CDS 20.0%
!! TTTAAACCTAAGGTTATATT+TGG + chr8_3:13269844-13269863 None:intergenic 20.0%
!!! AATTATCGACTTGATAAAAA+AGG + chr8_3:13270452-13270471 None:intergenic 20.0%
!!! TTTTTATCAAGTCGATAATT+TGG - chr8_3:13270452-13270471 Msa1277580:CDS 20.0%
!! TGAAATATGCAATAAAAGAA+GGG + chr8_3:13271199-13271218 None:intergenic 20.0%
!! TTGAAATATGCAATAAAAGA+AGG + chr8_3:13271200-13271219 None:intergenic 20.0%
!! TTTCATGTGTGAATCTTTTA+TGG + chr8_3:13269554-13269573 None:intergenic 25.0%
!!! ATTCCATTTTGAAGGAATTT+CGG + chr8_3:13269725-13269744 None:intergenic 25.0%
! TAGCAATGTATAAAGCAATA+TGG - chr8_3:13269992-13270011 Msa1277580:CDS 25.0%
! AGCAATGTATAAAGCAATAT+GGG - chr8_3:13269993-13270012 Msa1277580:CDS 25.0%
! GAAAACAATTGGAACATTAT+TGG + chr8_3:13270349-13270368 None:intergenic 25.0%
!! TAATGTTCCAATTGTTTTCA+TGG - chr8_3:13270350-13270369 Msa1277580:CDS 25.0%
!! AATGTTCCAATTGTTTTCAT+GGG - chr8_3:13270351-13270370 Msa1277580:CDS 25.0%
!! TCTTTCATGAAAACAGTTTT+TGG - chr8_3:13270636-13270655 Msa1277580:CDS 25.0%
! TTTCTTCTTATAGTTCAAGA+GGG - chr8_3:13270679-13270698 Msa1277580:CDS 25.0%
! AACAAGTTCAATTTGATAAG+TGG - chr8_3:13270819-13270838 Msa1277580:CDS 25.0%
!! GGACATATTTGATAATACTA+AGG - chr8_3:13270947-13270966 Msa1277580:CDS 25.0%
!! ATAATGGAAATTCTTCTTCA+AGG - chr8_3:13271219-13271238 Msa1277580:CDS 25.0%
! AACTGTTCTATGAAATTCTT+GGG + chr8_3:13271249-13271268 None:intergenic 25.0%
! TAACTGTTCTATGAAATTCT+TGG + chr8_3:13271250-13271269 None:intergenic 25.0%
!! TTTCATGTGTGAATCTTTTA+TGG + chr8_3:13269554-13269573 None:intergenic 25.0%
!!! ATTCCATTTTGAAGGAATTT+CGG + chr8_3:13269725-13269744 None:intergenic 25.0%
! TAGCAATGTATAAAGCAATA+TGG - chr8_3:13269992-13270011 Msa1277580:CDS 25.0%
! AGCAATGTATAAAGCAATAT+GGG - chr8_3:13269993-13270012 Msa1277580:CDS 25.0%
! GAAAACAATTGGAACATTAT+TGG + chr8_3:13270349-13270368 None:intergenic 25.0%
!! TAATGTTCCAATTGTTTTCA+TGG - chr8_3:13270350-13270369 Msa1277580:CDS 25.0%
!! AATGTTCCAATTGTTTTCAT+GGG - chr8_3:13270351-13270370 Msa1277580:CDS 25.0%
!! TCTTTCATGAAAACAGTTTT+TGG - chr8_3:13270636-13270655 Msa1277580:CDS 25.0%
! TTTCTTCTTATAGTTCAAGA+GGG - chr8_3:13270679-13270698 Msa1277580:CDS 25.0%
! AACAAGTTCAATTTGATAAG+TGG - chr8_3:13270819-13270838 Msa1277580:CDS 25.0%
!! GGACATATTTGATAATACTA+AGG - chr8_3:13270947-13270966 Msa1277580:CDS 25.0%
!! ATAATGGAAATTCTTCTTCA+AGG - chr8_3:13271219-13271238 Msa1277580:CDS 25.0%
! AACTGTTCTATGAAATTCTT+GGG + chr8_3:13271249-13271268 None:intergenic 25.0%
! TAACTGTTCTATGAAATTCT+TGG + chr8_3:13271250-13271269 None:intergenic 25.0%
TGTGTAGGTGTAAATTAACT+TGG + chr8_3:13269452-13269471 None:intergenic 30.0%
!! ATCTTTAAAGCTTTCGCTTT+CGG + chr8_3:13269692-13269711 None:intergenic 30.0%
GAAATTCCTTCAAAATGGAA+TGG - chr8_3:13269724-13269743 Msa1277580:CDS 30.0%
CAATCCTTTGTTGAAGAATT+TGG + chr8_3:13269809-13269828 None:intergenic 30.0%
!!! GTTGATGATGCTTCATTTTT+TGG - chr8_3:13269925-13269944 Msa1277580:CDS 30.0%
TATAAAGCAATATGGGATGT+TGG - chr8_3:13270000-13270019 Msa1277580:CDS 30.0%
GATGTTCTTTCACTATCATT+TGG - chr8_3:13270078-13270097 Msa1277580:CDS 30.0%
ACTATGGATAGAGAATTTCA+AGG - chr8_3:13270258-13270277 Msa1277580:CDS 30.0%
CTATGGATAGAGAATTTCAA+GGG - chr8_3:13270259-13270278 Msa1277580:CDS 30.0%
CATAAACCCATGAAAACAAT+TGG + chr8_3:13270360-13270379 None:intergenic 30.0%
ATTGATTGGATCAACAATGA+TGG + chr8_3:13270553-13270572 None:intergenic 30.0%
ATCATTGTTGATCCAATCAA+TGG - chr8_3:13270552-13270571 Msa1277580:CDS 30.0%
GAACTATAAGAAGAAACACT+AGG + chr8_3:13270675-13270694 None:intergenic 30.0%
GTTTCTTCTTATAGTTCAAG+AGG - chr8_3:13270678-13270697 Msa1277580:CDS 30.0%
ATGTCAGGTTTCAAAACATA+TGG + chr8_3:13270720-13270739 None:intergenic 30.0%
TTTGATAAGTGGAACATCTA+TGG - chr8_3:13270830-13270849 Msa1277580:CDS 30.0%
! AAGGAGCATATTAAAGACAT+TGG - chr8_3:13270966-13270985 Msa1277580:CDS 30.0%
!! TTATGTTTCTAGCATTACTC+AGG - chr8_3:13271295-13271314 Msa1277580:CDS 30.0%
AACGACAAAAATGAAGAAAG+TGG - chr8_3:13271412-13271431 Msa1277580:CDS 30.0%
! AAAATGAAGAAAGTGGCTTT+TGG - chr8_3:13271419-13271438 Msa1277580:CDS 30.0%
! AAATGAAGAAAGTGGCTTTT+GGG - chr8_3:13271420-13271439 Msa1277580:CDS 30.0%
TGTGTAGGTGTAAATTAACT+TGG + chr8_3:13269452-13269471 None:intergenic 30.0%
!! ATCTTTAAAGCTTTCGCTTT+CGG + chr8_3:13269692-13269711 None:intergenic 30.0%
GAAATTCCTTCAAAATGGAA+TGG - chr8_3:13269724-13269743 Msa1277580:CDS 30.0%
CAATCCTTTGTTGAAGAATT+TGG + chr8_3:13269809-13269828 None:intergenic 30.0%
!!! GTTGATGATGCTTCATTTTT+TGG - chr8_3:13269925-13269944 Msa1277580:CDS 30.0%
TATAAAGCAATATGGGATGT+TGG - chr8_3:13270000-13270019 Msa1277580:CDS 30.0%
GATGTTCTTTCACTATCATT+TGG - chr8_3:13270078-13270097 Msa1277580:CDS 30.0%
ACTATGGATAGAGAATTTCA+AGG - chr8_3:13270258-13270277 Msa1277580:CDS 30.0%
CTATGGATAGAGAATTTCAA+GGG - chr8_3:13270259-13270278 Msa1277580:CDS 30.0%
CATAAACCCATGAAAACAAT+TGG + chr8_3:13270360-13270379 None:intergenic 30.0%
ATTGATTGGATCAACAATGA+TGG + chr8_3:13270553-13270572 None:intergenic 30.0%
ATCATTGTTGATCCAATCAA+TGG - chr8_3:13270552-13270571 Msa1277580:CDS 30.0%
GAACTATAAGAAGAAACACT+AGG + chr8_3:13270675-13270694 None:intergenic 30.0%
GTTTCTTCTTATAGTTCAAG+AGG - chr8_3:13270678-13270697 Msa1277580:CDS 30.0%
ATGTCAGGTTTCAAAACATA+TGG + chr8_3:13270720-13270739 None:intergenic 30.0%
TTTGATAAGTGGAACATCTA+TGG - chr8_3:13270830-13270849 Msa1277580:CDS 30.0%
! AAGGAGCATATTAAAGACAT+TGG - chr8_3:13270966-13270985 Msa1277580:CDS 30.0%
!! TTATGTTTCTAGCATTACTC+AGG - chr8_3:13271295-13271314 Msa1277580:CDS 30.0%
AACGACAAAAATGAAGAAAG+TGG - chr8_3:13271412-13271431 Msa1277580:CDS 30.0%
! AAAATGAAGAAAGTGGCTTT+TGG - chr8_3:13271419-13271438 Msa1277580:CDS 30.0%
! AAATGAAGAAAGTGGCTTTT+GGG - chr8_3:13271420-13271439 Msa1277580:CDS 30.0%
! TTGTGGATTTTCTAATGCAG+AGG + chr8_3:13269389-13269408 None:intergenic 35.0%
!!! TTGCTTGTTTTTGTGAGTTG+TGG + chr8_3:13269406-13269425 None:intergenic 35.0%
! TTGAGGGATTCATGTTCTTT+TGG + chr8_3:13269508-13269527 None:intergenic 35.0%
TTTATGGATGAAATGTAGCC+TGG + chr8_3:13269538-13269557 None:intergenic 35.0%
! GCTTGGCATGATTCAAATTT+TGG - chr8_3:13269625-13269644 Msa1277580:CDS 35.0%
!! ATTGTTGGTTTAATCGACAC+CGG - chr8_3:13269658-13269677 Msa1277580:CDS 35.0%
!! TCTTTAAAGCTTTCGCTTTC+GGG + chr8_3:13269691-13269710 None:intergenic 35.0%
TGTCCGAAATTCCTTCAAAA+TGG - chr8_3:13269719-13269738 Msa1277580:CDS 35.0%
CTTTGCAACAAGAAACTCAT+TGG - chr8_3:13269781-13269800 Msa1277580:CDS 35.0%
!!! TCATTTTTTGGTTATGCACC+TGG - chr8_3:13269937-13269956 Msa1277580:CDS 35.0%
ACATTTGCAGCTATGGAAAA+AGG - chr8_3:13270144-13270163 Msa1277580:CDS 35.0%
TCCATTGTGAAGAGTTTCAA+GGG + chr8_3:13270208-13270227 None:intergenic 35.0%
TTCCATTGTGAAGAGTTTCA+AGG + chr8_3:13270209-13270228 None:intergenic 35.0%
GTTACCATTTCCAAGTGTAA+GGG + chr8_3:13270286-13270305 None:intergenic 35.0%
TGTTACCATTTCCAAGTGTA+AGG + chr8_3:13270287-13270306 None:intergenic 35.0%
TGGAAATGGTAACACAATCA+TGG - chr8_3:13270293-13270312 Msa1277580:CDS 35.0%
GGAAATGGTAACACAATCAT+GGG - chr8_3:13270294-13270313 Msa1277580:CDS 35.0%
GAAATGGTAACACAATCATG+GGG - chr8_3:13270295-13270314 Msa1277580:CDS 35.0%
!! ATGGGGTTGTCACTTTATAT+AGG - chr8_3:13270312-13270331 Msa1277580:CDS 35.0%
GGGTTTATGTGACAATGTTA+AGG - chr8_3:13270371-13270390 Msa1277580:CDS 35.0%
TTGGATGAAGCAAAAGTTCT+TGG - chr8_3:13270471-13270490 Msa1277580:CDS 35.0%
TGGATGAAGCAAAAGTTCTT+GGG - chr8_3:13270472-13270491 Msa1277580:CDS 35.0%
ACATATGGACAGCTATTTGA+AGG + chr8_3:13270705-13270724 None:intergenic 35.0%
GTACAAATATCTTAGCTGCA+TGG - chr8_3:13270751-13270770 Msa1277580:CDS 35.0%
!! AAATGTTCCTGTGATGGATT+TGG - chr8_3:13270779-13270798 Msa1277580:CDS 35.0%
!! AATGTTCCTGTGATGGATTT+GGG - chr8_3:13270780-13270799 Msa1277580:CDS 35.0%
ATTCGAAGAAGATCTTGTGA+TGG + chr8_3:13271144-13271163 None:intergenic 35.0%
CATAGAACAGTTACCAATGT+TGG - chr8_3:13271257-13271276 Msa1277580:CDS 35.0%
! CAGTGAATACCAACTTGTTT+GGG + chr8_3:13271346-13271365 None:intergenic 35.0%
! TCAGTGAATACCAACTTGTT+TGG + chr8_3:13271347-13271366 None:intergenic 35.0%
AGAAACTAAGCTACAAGTTG+AGG - chr8_3:13271375-13271394 Msa1277580:CDS 35.0%
!! TTTTGGGTATCTAACTTGGA+TGG - chr8_3:13271436-13271455 Msa1277580:CDS 35.0%
! TTGTGGATTTTCTAATGCAG+AGG + chr8_3:13269389-13269408 None:intergenic 35.0%
!!! TTGCTTGTTTTTGTGAGTTG+TGG + chr8_3:13269406-13269425 None:intergenic 35.0%
! TTGAGGGATTCATGTTCTTT+TGG + chr8_3:13269508-13269527 None:intergenic 35.0%
TTTATGGATGAAATGTAGCC+TGG + chr8_3:13269538-13269557 None:intergenic 35.0%
! GCTTGGCATGATTCAAATTT+TGG - chr8_3:13269625-13269644 Msa1277580:CDS 35.0%
!! ATTGTTGGTTTAATCGACAC+CGG - chr8_3:13269658-13269677 Msa1277580:CDS 35.0%
!! TCTTTAAAGCTTTCGCTTTC+GGG + chr8_3:13269691-13269710 None:intergenic 35.0%
TGTCCGAAATTCCTTCAAAA+TGG - chr8_3:13269719-13269738 Msa1277580:CDS 35.0%
CTTTGCAACAAGAAACTCAT+TGG - chr8_3:13269781-13269800 Msa1277580:CDS 35.0%
!!! TCATTTTTTGGTTATGCACC+TGG - chr8_3:13269937-13269956 Msa1277580:CDS 35.0%
ACATTTGCAGCTATGGAAAA+AGG - chr8_3:13270144-13270163 Msa1277580:CDS 35.0%
TCCATTGTGAAGAGTTTCAA+GGG + chr8_3:13270208-13270227 None:intergenic 35.0%
TTCCATTGTGAAGAGTTTCA+AGG + chr8_3:13270209-13270228 None:intergenic 35.0%
GTTACCATTTCCAAGTGTAA+GGG + chr8_3:13270286-13270305 None:intergenic 35.0%
TGTTACCATTTCCAAGTGTA+AGG + chr8_3:13270287-13270306 None:intergenic 35.0%
TGGAAATGGTAACACAATCA+TGG - chr8_3:13270293-13270312 Msa1277580:CDS 35.0%
GGAAATGGTAACACAATCAT+GGG - chr8_3:13270294-13270313 Msa1277580:CDS 35.0%
GAAATGGTAACACAATCATG+GGG - chr8_3:13270295-13270314 Msa1277580:CDS 35.0%
!! ATGGGGTTGTCACTTTATAT+AGG - chr8_3:13270312-13270331 Msa1277580:CDS 35.0%
GGGTTTATGTGACAATGTTA+AGG - chr8_3:13270371-13270390 Msa1277580:CDS 35.0%
TTGGATGAAGCAAAAGTTCT+TGG - chr8_3:13270471-13270490 Msa1277580:CDS 35.0%
TGGATGAAGCAAAAGTTCTT+GGG - chr8_3:13270472-13270491 Msa1277580:CDS 35.0%
ACATATGGACAGCTATTTGA+AGG + chr8_3:13270705-13270724 None:intergenic 35.0%
GTACAAATATCTTAGCTGCA+TGG - chr8_3:13270751-13270770 Msa1277580:CDS 35.0%
!! AAATGTTCCTGTGATGGATT+TGG - chr8_3:13270779-13270798 Msa1277580:CDS 35.0%
!! AATGTTCCTGTGATGGATTT+GGG - chr8_3:13270780-13270799 Msa1277580:CDS 35.0%
ATTCGAAGAAGATCTTGTGA+TGG + chr8_3:13271144-13271163 None:intergenic 35.0%
CATAGAACAGTTACCAATGT+TGG - chr8_3:13271257-13271276 Msa1277580:CDS 35.0%
! CAGTGAATACCAACTTGTTT+GGG + chr8_3:13271346-13271365 None:intergenic 35.0%
! TCAGTGAATACCAACTTGTT+TGG + chr8_3:13271347-13271366 None:intergenic 35.0%
AGAAACTAAGCTACAAGTTG+AGG - chr8_3:13271375-13271394 Msa1277580:CDS 35.0%
!! TTTTGGGTATCTAACTTGGA+TGG - chr8_3:13271436-13271455 Msa1277580:CDS 35.0%
!! TGGTGGGTTGTGAATACTTT+GGG + chr8_3:13269343-13269362 None:intergenic 40.0%
! ATGCAGAGGAAAGAGTTGAT+AGG + chr8_3:13269375-13269394 None:intergenic 40.0%
ACCTACACACATGTCATGAA+TGG - chr8_3:13269463-13269482 Msa1277580:CDS 40.0%
ACCATTCATGACATGTGTGT+AGG + chr8_3:13269467-13269486 None:intergenic 40.0%
TTTGGCAACGACGTAATTGT+TGG - chr8_3:13269643-13269662 Msa1277580:CDS 40.0%
GTTTAATCGACACCGGAATT+TGG - chr8_3:13269665-13269684 Msa1277580:CDS 40.0%
! CACTGTCCATTCCATTTTGA+AGG + chr8_3:13269733-13269752 None:intergenic 40.0%
GGTGCCAAATTCTTCAACAA+AGG - chr8_3:13269802-13269821 Msa1277580:CDS 40.0%
ACGAGTGGAGTTTAAACCTA+AGG + chr8_3:13269854-13269873 None:intergenic 40.0%
CATAGCTGCAAATGTTGCTA+TGG + chr8_3:13270139-13270158 None:intergenic 40.0%
CATAGCAACATTTGCAGCTA+TGG - chr8_3:13270137-13270156 Msa1277580:CDS 40.0%
!! GTTTTTGTTTCCACTTCAGC+TGG - chr8_3:13270168-13270187 Msa1277580:CDS 40.0%
TCTTCACAATGGAACACCTT+GGG - chr8_3:13270215-13270234 Msa1277580:CDS 40.0%
GATTGTTGTGTGTGAAGACA+AGG - chr8_3:13270416-13270435 Msa1277580:CDS 40.0%
GGATGAAGCAAAAGTTCTTG+GGG - chr8_3:13270473-13270492 Msa1277580:CDS 40.0%
TTGACTGCTTCTCCATTGAT+TGG + chr8_3:13270567-13270586 None:intergenic 40.0%
TAAGAAGAAACACTAGGTGC+TGG + chr8_3:13270669-13270688 None:intergenic 40.0%
GCAGCTAAGATATTTGTACC+AGG + chr8_3:13270750-13270769 None:intergenic 40.0%
TCCATCACAGGAACATTTGT+GGG + chr8_3:13270777-13270796 None:intergenic 40.0%
ATCCATCACAGGAACATTTG+TGG + chr8_3:13270778-13270797 None:intergenic 40.0%
!! ATGTTCCTGTGATGGATTTG+GGG - chr8_3:13270781-13270800 Msa1277580:CDS 40.0%
CAACCTCGTAAATAAGACCA+GGG + chr8_3:13271061-13271080 None:intergenic 40.0%
GGGTAGTTAAGATCCAAAGA+AGG + chr8_3:13271179-13271198 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG - chr8_3:13271262-13271281 Msa1277580:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG - chr8_3:13271263-13271282 Msa1277580:CDS 40.0%
!! TCTAGCATTACTCAGGTTGA+AGG - chr8_3:13271302-13271321 Msa1277580:CDS 40.0%
!! CTAGCATTACTCAGGTTGAA+GGG - chr8_3:13271303-13271322 Msa1277580:CDS 40.0%
! TGTTTGGGATAACACTGACA+CGG + chr8_3:13271331-13271350 None:intergenic 40.0%
CAGTGTTATCCCAAACAAGT+TGG - chr8_3:13271334-13271353 Msa1277580:CDS 40.0%
!! TGGCTTTTGGGTATCTAACT+TGG - chr8_3:13271432-13271451 Msa1277580:CDS 40.0%
TTGGATGGATATGAAGCATG+TGG - chr8_3:13271451-13271470 Msa1277580:CDS 40.0%
!! TGGTGGGTTGTGAATACTTT+GGG + chr8_3:13269343-13269362 None:intergenic 40.0%
! ATGCAGAGGAAAGAGTTGAT+AGG + chr8_3:13269375-13269394 None:intergenic 40.0%
ACCTACACACATGTCATGAA+TGG - chr8_3:13269463-13269482 Msa1277580:CDS 40.0%
ACCATTCATGACATGTGTGT+AGG + chr8_3:13269467-13269486 None:intergenic 40.0%
TTTGGCAACGACGTAATTGT+TGG - chr8_3:13269643-13269662 Msa1277580:CDS 40.0%
GTTTAATCGACACCGGAATT+TGG - chr8_3:13269665-13269684 Msa1277580:CDS 40.0%
! CACTGTCCATTCCATTTTGA+AGG + chr8_3:13269733-13269752 None:intergenic 40.0%
GGTGCCAAATTCTTCAACAA+AGG - chr8_3:13269802-13269821 Msa1277580:CDS 40.0%
ACGAGTGGAGTTTAAACCTA+AGG + chr8_3:13269854-13269873 None:intergenic 40.0%
CATAGCTGCAAATGTTGCTA+TGG + chr8_3:13270139-13270158 None:intergenic 40.0%
CATAGCAACATTTGCAGCTA+TGG - chr8_3:13270137-13270156 Msa1277580:CDS 40.0%
!! GTTTTTGTTTCCACTTCAGC+TGG - chr8_3:13270168-13270187 Msa1277580:CDS 40.0%
TCTTCACAATGGAACACCTT+GGG - chr8_3:13270215-13270234 Msa1277580:CDS 40.0%
GATTGTTGTGTGTGAAGACA+AGG - chr8_3:13270416-13270435 Msa1277580:CDS 40.0%
GGATGAAGCAAAAGTTCTTG+GGG - chr8_3:13270473-13270492 Msa1277580:CDS 40.0%
TTGACTGCTTCTCCATTGAT+TGG + chr8_3:13270567-13270586 None:intergenic 40.0%
TAAGAAGAAACACTAGGTGC+TGG + chr8_3:13270669-13270688 None:intergenic 40.0%
GCAGCTAAGATATTTGTACC+AGG + chr8_3:13270750-13270769 None:intergenic 40.0%
TCCATCACAGGAACATTTGT+GGG + chr8_3:13270777-13270796 None:intergenic 40.0%
ATCCATCACAGGAACATTTG+TGG + chr8_3:13270778-13270797 None:intergenic 40.0%
!! ATGTTCCTGTGATGGATTTG+GGG - chr8_3:13270781-13270800 Msa1277580:CDS 40.0%
CAACCTCGTAAATAAGACCA+GGG + chr8_3:13271061-13271080 None:intergenic 40.0%
GGGTAGTTAAGATCCAAAGA+AGG + chr8_3:13271179-13271198 None:intergenic 40.0%
AACAGTTACCAATGTTGGTG+AGG - chr8_3:13271262-13271281 Msa1277580:CDS 40.0%
! ACAGTTACCAATGTTGGTGA+GGG - chr8_3:13271263-13271282 Msa1277580:CDS 40.0%
!! TCTAGCATTACTCAGGTTGA+AGG - chr8_3:13271302-13271321 Msa1277580:CDS 40.0%
!! CTAGCATTACTCAGGTTGAA+GGG - chr8_3:13271303-13271322 Msa1277580:CDS 40.0%
! TGTTTGGGATAACACTGACA+CGG + chr8_3:13271331-13271350 None:intergenic 40.0%
CAGTGTTATCCCAAACAAGT+TGG - chr8_3:13271334-13271353 Msa1277580:CDS 40.0%
!! TGGCTTTTGGGTATCTAACT+TGG - chr8_3:13271432-13271451 Msa1277580:CDS 40.0%
TTGGATGGATATGAAGCATG+TGG - chr8_3:13271451-13271470 Msa1277580:CDS 40.0%
!! GTGGTGGGTTGTGAATACTT+TGG + chr8_3:13269344-13269363 None:intergenic 45.0%
TATTCACAACCCACCACACA+TGG - chr8_3:13269347-13269366 Msa1277580:CDS 45.0%
TGATAGGTACCATGTGTGGT+GGG + chr8_3:13269359-13269378 None:intergenic 45.0%
TTGATAGGTACCATGTGTGG+TGG + chr8_3:13269360-13269379 None:intergenic 45.0%
!! GAGTTGATAGGTACCATGTG+TGG + chr8_3:13269363-13269382 None:intergenic 45.0%
GAATCCCTCAAAACTTCACC+AGG - chr8_3:13269517-13269536 Msa1277580:CDS 45.0%
!! GTAGCCTGGTGAAGTTTTGA+GGG + chr8_3:13269524-13269543 None:intergenic 45.0%
! TGTAGCCTGGTGAAGTTTTG+AGG + chr8_3:13269525-13269544 None:intergenic 45.0%
ACACATTCACCTCAGTTCCT+CGG - chr8_3:13269583-13269602 Msa1277580:CDS 45.0%
AACTCCACTCGTGATTCACA+TGG - chr8_3:13269862-13269881 Msa1277580:CDS 45.0%
ATGACCATGTGAATCACGAG+TGG + chr8_3:13269869-13269888 None:intergenic 45.0%
ACTCGTGATTCACATGGTCA+TGG - chr8_3:13269868-13269887 Msa1277580:CDS 45.0%
CTCGTGATTCACATGGTCAT+GGG - chr8_3:13269869-13269888 Msa1277580:CDS 45.0%
TGTAATAGCCGCAATTGACG+CGG - chr8_3:13270038-13270057 Msa1277580:CDS 45.0%
TGATATTGCCGCGTCAATTG+CGG + chr8_3:13270049-13270068 None:intergenic 45.0%
ATTGACGCGGCAATATCAGA+CGG - chr8_3:13270051-13270070 Msa1277580:CDS 45.0%
GCAACAGGATCGTCATACAA+AGG + chr8_3:13270117-13270136 None:intergenic 45.0%
GCAAATGTTGCTATGGCAAC+AGG + chr8_3:13270132-13270151 None:intergenic 45.0%
TCCACTTCAGCTGGTAATAG+TGG - chr8_3:13270177-13270196 Msa1277580:CDS 45.0%
ACCACTATTACCAGCTGAAG+TGG + chr8_3:13270181-13270200 None:intergenic 45.0%
TTGTGAAGAGTTTCAAGGGC+AGG + chr8_3:13270204-13270223 None:intergenic 45.0%
GCCCTTGAAACTCTTCACAA+TGG - chr8_3:13270204-13270223 Msa1277580:CDS 45.0%
CTCTTCACAATGGAACACCT+TGG - chr8_3:13270214-13270233 Msa1277580:CDS 45.0%
AACACCTTGGGTCATAACTG+TGG - chr8_3:13270227-13270246 Msa1277580:CDS 45.0%
TTTCAAGGGACCCTTACACT+TGG - chr8_3:13270273-13270292 Msa1277580:CDS 45.0%
GTTGTGTGTGAAGACAAGGA+TGG - chr8_3:13270420-13270439 Msa1277580:CDS 45.0%
TGATTCCCCAAATCCATCAC+AGG + chr8_3:13270789-13270808 None:intergenic 45.0%
!! GCACTTTTGAAAGGAGCACA+CGG - chr8_3:13270879-13270898 Msa1277580:CDS 45.0%
GTCGGCAATTATGACAACGT+CGG - chr8_3:13270926-13270945 Msa1277580:CDS 45.0%
! AGCAGCAACTCCTTTTGCAT+TGG - chr8_3:13271001-13271020 Msa1277580:CDS 45.0%
! GCAGCAACTCCTTTTGCATT+GGG - chr8_3:13271002-13271021 Msa1277580:CDS 45.0%
!! TGACCCTGGTCTTATTTACG+AGG - chr8_3:13271055-13271074 Msa1277580:CDS 45.0%
CCAACCTCGTAAATAAGACC+AGG + chr8_3:13271062-13271081 None:intergenic 45.0%
!! CCTGGTCTTATTTACGAGGT+TGG - chr8_3:13271059-13271078 Msa1277580:CDS 45.0%
! TGATTGCTCTGAGCCTTCTT+TGG - chr8_3:13271163-13271182 Msa1277580:CDS 45.0%
TGTTTCTCCCTCACCAACAT+TGG + chr8_3:13271273-13271292 None:intergenic 45.0%
TGTGGTTAGAAGTCCAATCG+TGG - chr8_3:13271469-13271488 Msa1277580:CDS 45.0%
!! GTGGTGGGTTGTGAATACTT+TGG + chr8_3:13269344-13269363 None:intergenic 45.0%
TATTCACAACCCACCACACA+TGG - chr8_3:13269347-13269366 Msa1277580:CDS 45.0%
TGATAGGTACCATGTGTGGT+GGG + chr8_3:13269359-13269378 None:intergenic 45.0%
TTGATAGGTACCATGTGTGG+TGG + chr8_3:13269360-13269379 None:intergenic 45.0%
!! GAGTTGATAGGTACCATGTG+TGG + chr8_3:13269363-13269382 None:intergenic 45.0%
GAATCCCTCAAAACTTCACC+AGG - chr8_3:13269517-13269536 Msa1277580:CDS 45.0%
!! GTAGCCTGGTGAAGTTTTGA+GGG + chr8_3:13269524-13269543 None:intergenic 45.0%
! TGTAGCCTGGTGAAGTTTTG+AGG + chr8_3:13269525-13269544 None:intergenic 45.0%
ACACATTCACCTCAGTTCCT+CGG - chr8_3:13269583-13269602 Msa1277580:CDS 45.0%
AACTCCACTCGTGATTCACA+TGG - chr8_3:13269862-13269881 Msa1277580:CDS 45.0%
ATGACCATGTGAATCACGAG+TGG + chr8_3:13269869-13269888 None:intergenic 45.0%
ACTCGTGATTCACATGGTCA+TGG - chr8_3:13269868-13269887 Msa1277580:CDS 45.0%
CTCGTGATTCACATGGTCAT+GGG - chr8_3:13269869-13269888 Msa1277580:CDS 45.0%
TGTAATAGCCGCAATTGACG+CGG - chr8_3:13270038-13270057 Msa1277580:CDS 45.0%
TGATATTGCCGCGTCAATTG+CGG + chr8_3:13270049-13270068 None:intergenic 45.0%
ATTGACGCGGCAATATCAGA+CGG - chr8_3:13270051-13270070 Msa1277580:CDS 45.0%
GCAACAGGATCGTCATACAA+AGG + chr8_3:13270117-13270136 None:intergenic 45.0%
GCAAATGTTGCTATGGCAAC+AGG + chr8_3:13270132-13270151 None:intergenic 45.0%
TCCACTTCAGCTGGTAATAG+TGG - chr8_3:13270177-13270196 Msa1277580:CDS 45.0%
ACCACTATTACCAGCTGAAG+TGG + chr8_3:13270181-13270200 None:intergenic 45.0%
TTGTGAAGAGTTTCAAGGGC+AGG + chr8_3:13270204-13270223 None:intergenic 45.0%
GCCCTTGAAACTCTTCACAA+TGG - chr8_3:13270204-13270223 Msa1277580:CDS 45.0%
CTCTTCACAATGGAACACCT+TGG - chr8_3:13270214-13270233 Msa1277580:CDS 45.0%
AACACCTTGGGTCATAACTG+TGG - chr8_3:13270227-13270246 Msa1277580:CDS 45.0%
TTTCAAGGGACCCTTACACT+TGG - chr8_3:13270273-13270292 Msa1277580:CDS 45.0%
GTTGTGTGTGAAGACAAGGA+TGG - chr8_3:13270420-13270439 Msa1277580:CDS 45.0%
TGATTCCCCAAATCCATCAC+AGG + chr8_3:13270789-13270808 None:intergenic 45.0%
!! GCACTTTTGAAAGGAGCACA+CGG - chr8_3:13270879-13270898 Msa1277580:CDS 45.0%
GTCGGCAATTATGACAACGT+CGG - chr8_3:13270926-13270945 Msa1277580:CDS 45.0%
! AGCAGCAACTCCTTTTGCAT+TGG - chr8_3:13271001-13271020 Msa1277580:CDS 45.0%
! GCAGCAACTCCTTTTGCATT+GGG - chr8_3:13271002-13271021 Msa1277580:CDS 45.0%
!! TGACCCTGGTCTTATTTACG+AGG - chr8_3:13271055-13271074 Msa1277580:CDS 45.0%
CCAACCTCGTAAATAAGACC+AGG + chr8_3:13271062-13271081 None:intergenic 45.0%
!! CCTGGTCTTATTTACGAGGT+TGG - chr8_3:13271059-13271078 Msa1277580:CDS 45.0%
! TGATTGCTCTGAGCCTTCTT+TGG - chr8_3:13271163-13271182 Msa1277580:CDS 45.0%
TGTTTCTCCCTCACCAACAT+TGG + chr8_3:13271273-13271292 None:intergenic 45.0%
TGTGGTTAGAAGTCCAATCG+TGG - chr8_3:13271469-13271488 Msa1277580:CDS 45.0%
AAGCGCCTTTGTTGGGATTG+AGG + chr8_3:13269609-13269628 None:intergenic 50.0%
!! TCAATCCCAACAAAGGCGCT+TGG - chr8_3:13269608-13269627 Msa1277580:CDS 50.0%
TCATGCCAAGCGCCTTTGTT+GGG + chr8_3:13269616-13269635 None:intergenic 50.0%
ATCATGCCAAGCGCCTTTGT+TGG + chr8_3:13269617-13269636 None:intergenic 50.0%
TTCGCTTTCGGGCCAAATTC+CGG + chr8_3:13269680-13269699 None:intergenic 50.0%
CACACTTCATCAACAGCAGC+TGG - chr8_3:13269895-13269914 Msa1277580:CDS 50.0%
TATGCACCTGGAACAGCTTC+AGG - chr8_3:13269949-13269968 Msa1277580:CDS 50.0%
GCTATTCCTGAAGCTGTTCC+AGG + chr8_3:13269958-13269977 None:intergenic 50.0%
AACTGTGGCTGCTGGAACTA+TGG - chr8_3:13270242-13270261 Msa1277580:CDS 50.0%
GGGACCCTTACACTTGGAAA+TGG - chr8_3:13270279-13270298 Msa1277580:CDS 50.0%
AAACCTGACATCACTGCTCC+TGG - chr8_3:13270729-13270748 Msa1277580:CDS 50.0%
GCCCACAAATGTTCCTGTGA+TGG - chr8_3:13270773-13270792 Msa1277580:CDS 50.0%
ATGGCATGTCCTCATGTTGC+AGG - chr8_3:13270849-13270868 Msa1277580:CDS 50.0%
! TGAAAGGAGCACACGGTGAT+TGG - chr8_3:13270886-13270905 Msa1277580:CDS 50.0%
CATAATTGCCGACCGAATCG+CGG + chr8_3:13270919-13270938 None:intergenic 50.0%
! ACTCCTTTTGCATTGGGAGC+TGG - chr8_3:13271008-13271027 Msa1277580:CDS 50.0%
TGACCAGCTCCCAATGCAAA+AGG + chr8_3:13271014-13271033 None:intergenic 50.0%
CCAGGGTCAAGTGCTCTATT+TGG + chr8_3:13271044-13271063 None:intergenic 50.0%
! CCAAATAGAGCACTTGACCC+TGG - chr8_3:13271041-13271060 Msa1277580:CDS 50.0%
! TCGAGTATTGCGACCACGAT+TGG + chr8_3:13271485-13271504 None:intergenic 50.0%
AAGCGCCTTTGTTGGGATTG+AGG + chr8_3:13269609-13269628 None:intergenic 50.0%
!! TCAATCCCAACAAAGGCGCT+TGG - chr8_3:13269608-13269627 Msa1277580:CDS 50.0%
TCATGCCAAGCGCCTTTGTT+GGG + chr8_3:13269616-13269635 None:intergenic 50.0%
ATCATGCCAAGCGCCTTTGT+TGG + chr8_3:13269617-13269636 None:intergenic 50.0%
TTCGCTTTCGGGCCAAATTC+CGG + chr8_3:13269680-13269699 None:intergenic 50.0%
CACACTTCATCAACAGCAGC+TGG - chr8_3:13269895-13269914 Msa1277580:CDS 50.0%
TATGCACCTGGAACAGCTTC+AGG - chr8_3:13269949-13269968 Msa1277580:CDS 50.0%
GCTATTCCTGAAGCTGTTCC+AGG + chr8_3:13269958-13269977 None:intergenic 50.0%
AACTGTGGCTGCTGGAACTA+TGG - chr8_3:13270242-13270261 Msa1277580:CDS 50.0%
GGGACCCTTACACTTGGAAA+TGG - chr8_3:13270279-13270298 Msa1277580:CDS 50.0%
AAACCTGACATCACTGCTCC+TGG - chr8_3:13270729-13270748 Msa1277580:CDS 50.0%
GCCCACAAATGTTCCTGTGA+TGG - chr8_3:13270773-13270792 Msa1277580:CDS 50.0%
ATGGCATGTCCTCATGTTGC+AGG - chr8_3:13270849-13270868 Msa1277580:CDS 50.0%
! TGAAAGGAGCACACGGTGAT+TGG - chr8_3:13270886-13270905 Msa1277580:CDS 50.0%
CATAATTGCCGACCGAATCG+CGG + chr8_3:13270919-13270938 None:intergenic 50.0%
! ACTCCTTTTGCATTGGGAGC+TGG - chr8_3:13271008-13271027 Msa1277580:CDS 50.0%
TGACCAGCTCCCAATGCAAA+AGG + chr8_3:13271014-13271033 None:intergenic 50.0%
CCAGGGTCAAGTGCTCTATT+TGG + chr8_3:13271044-13271063 None:intergenic 50.0%
! CCAAATAGAGCACTTGACCC+TGG - chr8_3:13271041-13271060 Msa1277580:CDS 50.0%
! TCGAGTATTGCGACCACGAT+TGG + chr8_3:13271485-13271504 None:intergenic 50.0%
CTTTGTTGGGATTGAGGCCG+AGG + chr8_3:13269603-13269622 None:intergenic 55.0%
CTCGGCCTCAATCCCAACAA+AGG - chr8_3:13269601-13269620 Msa1277580:CDS 55.0%
GCAGCCACAGTTATGACCCA+AGG + chr8_3:13270234-13270253 None:intergenic 55.0%
TGGGTCATAACTGTGGCTGC+TGG - chr8_3:13270234-13270253 Msa1277580:CDS 55.0%
GTACCAGGAGCAGTGATGTC+AGG + chr8_3:13270735-13270754 None:intergenic 55.0%
! TCCTCATGTTGCAGGTGTCG+CGG - chr8_3:13270857-13270876 Msa1277580:CDS 55.0%
!! GGTGTCGCGGCACTTTTGAA+AGG - chr8_3:13270870-13270889 Msa1277580:CDS 55.0%
CTTTGTTGGGATTGAGGCCG+AGG + chr8_3:13269603-13269622 None:intergenic 55.0%
CTCGGCCTCAATCCCAACAA+AGG - chr8_3:13269601-13269620 Msa1277580:CDS 55.0%
GCAGCCACAGTTATGACCCA+AGG + chr8_3:13270234-13270253 None:intergenic 55.0%
TGGGTCATAACTGTGGCTGC+TGG - chr8_3:13270234-13270253 Msa1277580:CDS 55.0%
GTACCAGGAGCAGTGATGTC+AGG + chr8_3:13270735-13270754 None:intergenic 55.0%
! TCCTCATGTTGCAGGTGTCG+CGG - chr8_3:13270857-13270876 Msa1277580:CDS 55.0%
!! GGTGTCGCGGCACTTTTGAA+AGG - chr8_3:13270870-13270889 Msa1277580:CDS 55.0%
GGATTGAGGCCGAGGAACTG+AGG + chr8_3:13269595-13269614 None:intergenic 60.0%
ATTGGAGCCCTGCCGCGATT+CGG - chr8_3:13270904-13270923 Msa1277580:CDS 60.0%
GGATTGAGGCCGAGGAACTG+AGG + chr8_3:13269595-13269614 None:intergenic 60.0%
ATTGGAGCCCTGCCGCGATT+CGG - chr8_3:13270904-13270923 Msa1277580:CDS 60.0%
GCCGCGACACCTGCAACATG+AGG + chr8_3:13270861-13270880 None:intergenic 65.0%
TTGCCGACCGAATCGCGGCA+GGG + chr8_3:13270914-13270933 None:intergenic 65.0%
ATTGCCGACCGAATCGCGGC+AGG + chr8_3:13270915-13270934 None:intergenic 65.0%
GCCGCGACACCTGCAACATG+AGG + chr8_3:13270861-13270880 None:intergenic 65.0%
TTGCCGACCGAATCGCGGCA+GGG + chr8_3:13270914-13270933 None:intergenic 65.0%
ATTGCCGACCGAATCGCGGC+AGG + chr8_3:13270915-13270934 None:intergenic 65.0%
!! GAGCCCTGCCGCGATTCGGT+CGG - chr8_3:13270908-13270927 Msa1277580:CDS 70.0%
!! GAGCCCTGCCGCGATTCGGT+CGG - chr8_3:13270908-13270927 Msa1277580:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 13269337 13271508 13269337 ID=Msa1277580;Name=Msa1277580
chr8_3 mRNA 13269337 13271508 13269337 ID=Msa1277580-mRNA-1;Parent=Msa1277580;Name=Msa1277580-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|723
chr8_3 exon 13269337 13271508 13269337 ID=Msa1277580-mRNA-1:exon:5219;Parent=Msa1277580-mRNA-1
chr8_3 CDS 13269337 13271508 13269337 ID=Msa1277580-mRNA-1:cds;Parent=Msa1277580-mRNA-1
Gene Sequence

>Msa1277580

ATGCCCAAAGTATTCACAACCCACCACACATGGTACCTATCAACTCTTTCCTCTGCATTAGAAAATCCACAACTCACAAAAACAAGCAATAATCTCAACTCTCTATTTTCTTCCAAGTTAATTTACACCTACACACATGTCATGAATGGTTTTAGTGCTAATTTATCACCAAAAGAACATGAATCCCTCAAAACTTCACCAGGCTACATTTCATCCATAAAAGATTCACACATGAAACTCGACACAACACATTCACCTCAGTTCCTCGGCCTCAATCCCAACAAAGGCGCTTGGCATGATTCAAATTTTGGCAACGACGTAATTGTTGGTTTAATCGACACCGGAATTTGGCCCGAAAGCGAAAGCTTTAAAGATAATTTAATGTCCGAAATTCCTTCAAAATGGAATGGACAGTGTGAAAATAGCATTCTTTTCAATTCATCTCTTTGCAACAAGAAACTCATTGGTGCCAAATTCTTCAACAAAGGATTGCAATCCAAATATCCAAATATAACCTTAGGTTTAAACTCCACTCGTGATTCACATGGTCATGGGACTCACACTTCATCAACAGCAGCTGGAAACAGAGTTGATGATGCTTCATTTTTTGGTTATGCACCTGGAACAGCTTCAGGAATAGCTTCAAATTCACGAGTAGCAATGTATAAAGCAATATGGGATGTTGGATTTTTATCATCTGATGTAATAGCCGCAATTGACGCGGCAATATCAGACGGTGTTGATGTTCTTTCACTATCATTTGGTAAAAATGACGTGCCTTTGTATGACGATCCTGTTGCCATAGCAACATTTGCAGCTATGGAAAAAGGTGTTTTTGTTTCCACTTCAGCTGGTAATAGTGGTCCTGCCCTTGAAACTCTTCACAATGGAACACCTTGGGTCATAACTGTGGCTGCTGGAACTATGGATAGAGAATTTCAAGGGACCCTTACACTTGGAAATGGTAACACAATCATGGGGTTGTCACTTTATATAGGAACATTTTCTTCCAATAATGTTCCAATTGTTTTCATGGGTTTATGTGACAATGTTAAGGAATTGAAAAAAGTGAAAAACAAGATTGTTGTGTGTGAAGACAAGGATGGAGCAAGCCTTTTTTATCAAGTCGATAATTTGGATGAAGCAAAAGTTCTTGGGGCTGTTTTTATTACAAATGTTACAGACATGTACTATTCAGAAAATAATTTTGCATCCATCATTGTTGATCCAATCAATGGAGAAGCAGTCAAAGCTTACATCAAGAGTTACTCTAAAAACTCTACTTCAAAAGCAAGCATGTCTTTCATGAAAACAGTTTTTGGAATTAAACCAGCACCTAGTGTTTCTTCTTATAGTTCAAGAGGGCCTTCAAATAGCTGTCCATATGTTTTGAAACCTGACATCACTGCTCCTGGTACAAATATCTTAGCTGCATGGCCCACAAATGTTCCTGTGATGGATTTGGGGAATCATAAGATCTTCAACAAGTTCAATTTGATAAGTGGAACATCTATGGCATGTCCTCATGTTGCAGGTGTCGCGGCACTTTTGAAAGGAGCACACGGTGATTGGAGCCCTGCCGCGATTCGGTCGGCAATTATGACAACGTCGGACATATTTGATAATACTAAGGAGCATATTAAAGACATTGGAAATGATAATAAAGCAGCAACTCCTTTTGCATTGGGAGCTGGTCATGTTAATCCAAATAGAGCACTTGACCCTGGTCTTATTTACGAGGTTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTACTCACAAAAAAACATCACTGCCATCACAAGATCTTCTTCGAATGATTGCTCTGAGCCTTCTTTGGATCTTAACTACCCTTCTTTTATTGCATATTTCAATAATGGAAATTCTTCTTCAAGGACAACCCAAGAATTTCATAGAACAGTTACCAATGTTGGTGAGGGAGAAACAATTTATGTTTCTAGCATTACTCAGGTTGAAGGGTTCCGTGTCAGTGTTATCCCAAACAAGTTGGTATTCACTGAGAAGAATGAGAAACTAAGCTACAAGTTGAGGATTGAAGTTGCAAGAACGACAAAAATGAAGAAAGTGGCTTTTGGGTATCTAACTTGGATGGATATGAAGCATGTGGTTAGAAGTCCAATCGTGGTCGCAATACTCGAATAG

Protein sequence

>Msa1277580

MPKVFTTHHTWYLSTLSSALENPQLTKTSNNLNSLFSSKLIYTYTHVMNGFSANLSPKEHESLKTSPGYISSIKDSHMKLDTTHSPQFLGLNPNKGAWHDSNFGNDVIVGLIDTGIWPESESFKDNLMSEIPSKWNGQCENSILFNSSLCNKKLIGAKFFNKGLQSKYPNITLGLNSTRDSHGHGTHTSSTAAGNRVDDASFFGYAPGTASGIASNSRVAMYKAIWDVGFLSSDVIAAIDAAISDGVDVLSLSFGKNDVPLYDDPVAIATFAAMEKGVFVSTSAGNSGPALETLHNGTPWVITVAAGTMDREFQGTLTLGNGNTIMGLSLYIGTFSSNNVPIVFMGLCDNVKELKKVKNKIVVCEDKDGASLFYQVDNLDEAKVLGAVFITNVTDMYYSENNFASIIVDPINGEAVKAYIKSYSKNSTSKASMSFMKTVFGIKPAPSVSSYSSRGPSNSCPYVLKPDITAPGTNILAAWPTNVPVMDLGNHKIFNKFNLISGTSMACPHVAGVAALLKGAHGDWSPAAIRSAIMTTSDIFDNTKEHIKDIGNDNKAATPFALGAGHVNPNRALDPGLIYEVGVQDYVNLLCALNYSQKNITAITRSSSNDCSEPSLDLNYPSFIAYFNNGNSSSRTTQEFHRTVTNVGEGETIYVSSITQVEGFRVSVIPNKLVFTEKNEKLSYKLRIEVARTTKMKKVAFGYLTWMDMKHVVRSPIVVAILE*