AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0645560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0645560 MtrunA17_Chr4g0033321 95.602 523 15 3 1 519 1 519 0.0 1023
Msa0645560 MtrunA17_Chr4g0033401 94.837 523 20 2 1 519 1 520 0.0 1019
Msa0645560 MtrunA17_Chr4g0033331 89.648 512 51 1 1 512 5 514 0.0 938
Msa0645560 MtrunA17_Chr4g0033311 75.147 511 125 1 4 514 8 516 0.0 828
Msa0645560 MtrunA17_Chr3g0088441 73.684 513 131 2 6 514 3 515 0.0 812
Msa0645560 MtrunA17_Chr2g0329201 70.942 499 143 1 13 511 9 505 0.0 752
Msa0645560 MtrunA17_Chr6g0482131 72.479 476 131 0 36 511 35 510 0.0 738
Msa0645560 MtrunA17_Chr2g0329191 71.458 480 136 1 32 511 29 507 0.0 735
Msa0645560 MtrunA17_Chr4g0033191 68.058 479 153 0 33 511 39 517 0.0 719
Msa0645560 MtrunA17_Chr4g0033271 65.625 512 172 2 1 511 1 509 0.0 715
Msa0645560 MtrunA17_Chr6g0482071 66.601 509 165 2 12 516 9 516 0.0 713
Msa0645560 MtrunA17_Chr4g0033201 65.422 509 168 2 4 511 9 510 0.0 712
Msa0645560 MtrunA17_Chr4g0033341 65.545 505 168 3 8 511 42 541 0.0 709
Msa0645560 MtrunA17_Chr6g0482081 67.525 505 157 2 8 511 13 511 0.0 699
Msa0645560 MtrunA17_Chr2g0329321 64.188 511 154 3 1 511 5 486 0.0 690
Msa0645560 MtrunA17_Chr4g0033261 62.109 512 162 4 6 514 12 494 0.0 645
Msa0645560 MtrunA17_Chr4g0033231 63.180 478 148 2 36 511 40 491 0.0 629
Msa0645560 MtrunA17_Chr5g0430451 61.315 517 164 3 4 511 7 496 0.0 622
Msa0645560 MtrunA17_Chr4g0010501 60.924 476 180 3 36 511 23 492 0.0 609
Msa0645560 MtrunA17_Chr4g0006111 57.290 487 168 7 37 511 65 523 0.0 559
Msa0645560 MtrunA17_Chr3g0087261 54.403 511 217 6 4 511 10 507 0.0 556
Msa0645560 MtrunA17_Chr3g0087271 52.362 508 233 5 4 511 10 508 0.0 537
Msa0645560 MtrunA17_Chr4g0006131 56.619 491 174 9 37 516 42 504 0.0 536
Msa0645560 MtrunA17_Chr4g0043091 52.071 507 231 6 9 511 3 501 0.0 526
Msa0645560 MtrunA17_Chr4g0042171 49.213 508 246 6 10 514 3 501 1.01e-166 482
Msa0645560 MtrunA17_Chr6g0482941 47.656 512 253 7 4 514 16 513 3.75e-165 478
Msa0645560 MtrunA17_Chr6g0482951 47.070 512 256 7 4 514 16 513 2.39e-164 476
Msa0645560 MtrunA17_Chr2g0301231 58.034 417 138 6 105 511 1 390 9.21e-164 469
Msa0645560 MtrunA17_Chr3g0090131 48.529 476 232 4 36 511 20 482 3.92e-156 454
Msa0645560 MtrunA17_Chr3g0090111 48.421 475 231 5 37 511 19 479 4.45e-156 454
Msa0645560 MtrunA17_Chr4g0074561 47.789 475 243 4 42 513 40 512 9.29e-156 454
Msa0645560 MtrunA17_Chr4g0074551 47.292 480 247 5 42 519 55 530 4.65e-153 449
Msa0645560 MtrunA17_Chr2g0288071 48.101 474 241 4 46 517 76 546 9.30e-151 442
Msa0645560 MtrunA17_Chr4g0006971 46.708 486 243 7 36 519 26 497 1.82e-146 430
Msa0645560 MtrunA17_Chr2g0317841 44.353 487 258 7 37 518 32 510 3.13e-146 430
Msa0645560 MtrunA17_Chr2g0317821 45.175 487 254 7 37 518 32 510 7.37e-146 429
Msa0645560 MtrunA17_Chr7g0242681 46.640 491 231 9 37 518 38 506 1.36e-144 426
Msa0645560 MtrunA17_Chr7g0242691 45.361 485 249 6 36 518 30 500 5.08e-144 424
Msa0645560 MtrunA17_Chr2g0288021 43.249 511 279 8 6 512 5 508 3.43e-141 417
Msa0645560 MtrunA17_Chr1g0195611 45.996 487 235 8 32 511 22 487 7.99e-140 413
Msa0645560 MtrunA17_Chr5g0428831 45.492 488 237 9 32 511 22 488 5.59e-138 408
Msa0645560 MtrunA17_Chr3g0087201 55.891 331 141 2 181 511 17 342 2.96e-132 387
Msa0645560 MtrunA17_Chr5g0418871 58.863 299 120 2 56 354 2 297 4.45e-127 374
Msa0645560 MtrunA17_Chr7g0234111 44.351 478 246 6 38 514 76 534 5.89e-127 381
Msa0645560 MtrunA17_Chr7g0234091 42.589 479 253 5 38 514 76 534 1.70e-123 372
Msa0645560 MtrunA17_Chr7g0234131 42.620 481 255 6 38 516 76 537 3.28e-123 371
Msa0645560 MtrunA17_Chr1g0195641 48.593 391 180 6 39 423 29 404 6.27e-120 358
Msa0645560 MtrunA17_Chr7g0230651 43.272 379 191 5 84 458 18 376 3.64e-99 304
Msa0645560 MtrunA17_Chr3g0087191 77.931 145 32 0 36 180 21 165 1.01e-81 251
Msa0645560 MtrunA17_Chr7g0236731 48.193 249 122 2 126 373 28 270 1.62e-64 211
Msa0645560 MtrunA17_Chr7g0227561 39.927 273 123 5 38 306 47 282 6.54e-62 205
Msa0645560 MtrunA17_Chr4g0068871 25.467 428 234 12 101 516 183 537 1.23e-29 123
Msa0645560 MtrunA17_Chr5g0418861 50.549 91 44 1 423 512 1 91 6.48e-24 95.9
Msa0645560 MtrunA17_Chr8g0352881 38.636 132 68 2 237 358 24 152 9.42e-24 97.8
Msa0645560 MtrunA17_Chr8g0352881 55.556 54 23 1 46 99 7 59 1.71e-13 68.6
Msa0645560 MtrunA17_Chr7g0227591 53.704 54 25 0 460 513 14 67 3.23e-13 64.7
Msa0645560 MtrunA17_Chr2g0288031 47.458 59 30 1 188 246 3 60 3.55e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0645560 AT5G44640.1 53.981 515 225 5 1 514 1 504 0.0 575
Msa0645560 AT5G42260.1 54.528 508 219 5 1 507 1 497 0.0 568
Msa0645560 AT2G44450.1 55.509 481 209 2 37 517 31 506 0.0 568
Msa0645560 AT2G44480.1 54.375 480 218 1 36 515 34 512 0.0 559
Msa0645560 AT2G44480.3 54.375 480 218 1 36 515 65 543 0.0 559
Msa0645560 AT3G60130.1 55.672 476 205 3 37 511 30 500 0.0 559
Msa0645560 AT2G25630.1 51.992 502 218 4 14 514 7 486 0.0 537
Msa0645560 AT5G24550.1 53.236 479 219 5 37 511 32 509 0.0 527
Msa0645560 AT3G60140.1 49.699 499 240 6 16 511 12 502 0.0 520
Msa0645560 AT5G24540.1 50.784 510 244 6 8 511 1 509 0.0 520
Msa0645560 AT1G51470.1 53.653 479 208 7 36 512 44 510 5.40e-179 513
Msa0645560 AT1G26560.1 52.075 482 221 6 37 513 32 508 1.45e-177 509
Msa0645560 AT1G47600.1 53.027 479 211 7 36 512 44 510 4.15e-176 506
Msa0645560 AT1G47600.2 53.027 479 210 7 36 512 44 509 6.92e-176 505
Msa0645560 AT3G60120.1 51.452 482 223 7 36 511 13 489 4.81e-175 504
Msa0645560 AT2G44490.1 49.692 487 239 5 36 517 13 498 2.94e-171 495
Msa0645560 AT2G44460.1 48.069 518 254 6 1 515 3 508 8.33e-171 495
Msa0645560 AT5G54570.1 49.278 485 229 4 36 511 29 505 2.13e-169 489
Msa0645560 AT3G18080.1 49.600 500 240 8 20 515 20 511 3.51e-169 488
Msa0645560 AT2G44470.3 46.667 495 260 4 27 518 19 512 3.82e-169 491
Msa0645560 AT3G18070.3 48.980 490 230 9 28 514 21 493 2.55e-164 475
Msa0645560 AT5G25980.2 48.269 520 257 9 4 517 17 530 9.84e-164 476
Msa0645560 AT3G18070.1 49.184 490 235 9 28 514 21 499 1.90e-163 473
Msa0645560 AT3G60130.2 54.106 414 184 3 99 511 40 448 6.82e-163 470
Msa0645560 AT2G44480.2 52.311 411 195 1 105 515 1 410 3.67e-162 467
Msa0645560 AT3G09260.1 48.333 480 241 6 37 512 35 511 5.78e-159 462
Msa0645560 AT2G32860.2 45.436 482 260 3 36 514 93 574 4.02e-158 464
Msa0645560 AT5G36890.2 49.582 478 228 4 38 514 17 482 1.03e-157 458
Msa0645560 AT5G36890.1 49.582 478 228 4 38 514 17 482 1.28e-157 458
Msa0645560 AT2G32860.1 45.228 482 260 4 36 514 93 573 1.26e-156 460
Msa0645560 AT3G60130.3 53.140 414 177 4 99 511 40 437 9.95e-156 452
Msa0645560 AT3G03640.1 44.767 516 274 5 1 511 3 512 5.21e-155 453
Msa0645560 AT5G26000.1 46.272 523 261 10 8 518 4 518 4.42e-154 451
Msa0645560 AT1G75940.1 47.531 486 239 9 37 511 37 517 1.28e-153 449
Msa0645560 AT5G24540.2 49.011 455 226 5 8 457 1 454 1.88e-152 443
Msa0645560 AT3G21370.1 46.170 483 250 8 36 511 32 511 2.96e-152 446
Msa0645560 AT1G52400.3 45.136 514 269 10 8 514 11 518 7.93e-151 442
Msa0645560 AT1G52400.1 45.136 514 269 10 8 514 11 518 7.93e-151 442
Msa0645560 AT5G28510.1 45.547 494 257 7 29 513 31 521 2.06e-150 441
Msa0645560 AT1G66280.1 46.230 504 257 9 16 511 13 510 2.20e-150 441
Msa0645560 AT1G66270.1 46.473 482 246 8 37 512 36 511 2.14e-147 433
Msa0645560 AT1G02850.2 47.579 475 232 7 38 511 27 485 8.98e-147 431
Msa0645560 AT5G54570.3 48.260 431 207 3 36 458 29 451 1.79e-146 428
Msa0645560 AT2G44470.1 45.727 433 232 3 27 457 19 450 1.76e-145 426
Msa0645560 AT1G61820.1 46.407 487 253 7 29 511 22 504 2.30e-145 427
Msa0645560 AT1G66270.2 46.266 482 245 9 37 512 36 509 2.13e-144 425
Msa0645560 AT3G60140.2 48.655 409 200 5 16 422 12 412 3.04e-144 422
Msa0645560 AT5G25980.3 47.484 457 232 6 4 458 17 467 5.04e-143 420
Msa0645560 AT5G25980.1 47.484 457 232 6 4 458 17 467 5.04e-143 420
Msa0645560 AT1G02850.5 45.582 498 231 8 38 511 27 508 1.40e-142 421
Msa0645560 AT4G21760.2 43.529 510 275 7 6 511 21 521 3.15e-141 418
Msa0645560 AT1G02850.4 45.691 499 230 9 38 511 27 509 5.70e-141 417
Msa0645560 AT4G27830.1 42.490 506 264 7 9 511 3 484 5.48e-138 409
Msa0645560 AT1G60090.2 44.306 483 245 9 37 515 24 486 1.24e-137 407
Msa0645560 AT1G02850.1 46.105 475 212 8 38 511 27 458 5.87e-137 404
Msa0645560 AT1G61810.1 45.303 479 254 7 37 511 33 507 8.70e-137 406
Msa0645560 AT5G54570.2 47.837 416 200 4 105 511 1 408 1.56e-136 402
Msa0645560 AT2G44480.4 59.936 312 123 2 36 347 65 374 5.00e-136 399
Msa0645560 AT4G21760.1 42.549 510 270 8 6 511 21 511 5.68e-134 399
Msa0645560 AT5G26000.2 45.553 461 233 8 8 458 4 456 7.77e-134 396
Msa0645560 AT4G22100.1 44.770 478 242 9 38 511 23 482 1.09e-133 397
Msa0645560 AT1G60090.1 43.002 493 244 10 37 515 24 493 1.23e-133 397
Msa0645560 AT2G44450.2 51.111 360 171 2 158 517 1 355 3.98e-133 390
Msa0645560 AT1G61810.3 45.987 461 241 7 42 498 38 494 1.38e-132 396
Msa0645560 AT3G62750.1 42.245 490 251 8 26 511 12 473 1.80e-130 389
Msa0645560 AT3G62750.2 42.245 490 251 8 26 511 38 499 5.50e-130 389
Msa0645560 AT4G27820.1 43.958 480 246 7 36 511 22 482 8.65e-130 387
Msa0645560 AT1G45191.4 43.659 481 243 9 38 514 30 486 1.95e-128 384
Msa0645560 AT1G52400.2 44.079 456 243 9 8 457 11 460 1.55e-125 375
Msa0645560 AT2G44470.2 45.383 379 204 3 27 403 19 396 3.64e-125 372
Msa0645560 AT1G45191.6 42.245 490 248 9 38 514 30 497 1.06e-124 375
Msa0645560 AT1G45191.2 42.412 481 255 9 38 514 30 492 2.09e-124 374
Msa0645560 AT3G62740.1 41.104 489 263 10 26 511 12 478 2.84e-124 373
Msa0645560 AT1G45191.1 41.800 500 248 10 38 514 30 509 3.92e-123 371
Msa0645560 AT1G02850.3 47.059 408 183 6 38 422 27 424 3.97e-122 365
Msa0645560 AT5G48375.1 45.190 447 173 9 33 476 34 411 3.40e-119 358
Msa0645560 AT3G18070.4 51.497 334 155 5 28 361 21 347 5.21e-118 353
Msa0645560 AT3G62750.4 41.781 438 224 7 26 460 38 447 1.04e-112 342
Msa0645560 AT1G60270.1 48.547 344 166 5 37 377 24 359 4.96e-112 337
Msa0645560 AT2G44460.2 47.934 363 185 4 156 515 1 362 4.52e-110 334
Msa0645560 AT3G62740.2 42.019 426 223 9 34 457 20 423 6.96e-110 333
Msa0645560 AT1G61810.5 44.039 411 222 7 105 511 1 407 1.34e-109 333
Msa0645560 AT1G61810.4 44.872 390 208 6 37 422 33 419 5.90e-109 331
Msa0645560 AT1G51490.1 49.148 352 162 7 44 392 27 364 1.98e-108 329
Msa0645560 AT4G27830.2 41.951 410 221 5 105 511 1 396 2.40e-107 327
Msa0645560 AT1G45191.5 48.810 336 160 5 38 370 30 356 7.52e-107 325
Msa0645560 AT1G45191.3 48.810 336 160 5 38 370 30 356 1.10e-106 325
Msa0645560 AT3G62750.7 46.547 333 162 4 26 358 12 328 2.13e-105 320
Msa0645560 AT3G62750.8 46.547 333 162 4 26 358 12 328 2.13e-105 320
Msa0645560 AT3G62750.3 46.547 333 162 4 26 358 38 354 1.88e-104 320
Msa0645560 AT4G27820.2 42.336 411 219 6 105 511 1 397 3.55e-100 308
Msa0645560 AT4G27820.3 42.336 411 219 6 105 511 1 397 3.55e-100 308
Msa0645560 AT2G44480.5 47.682 302 157 1 214 515 6 306 4.99e-100 304
Msa0645560 AT3G18070.2 47.130 331 166 6 188 515 99 423 4.11e-99 306
Msa0645560 AT3G18070.2 56.944 72 30 1 28 99 21 91 3.01e-19 90.5
Msa0645560 AT1G61820.3 44.658 365 195 6 151 511 4 365 7.97e-99 303
Msa0645560 AT3G62750.6 39.903 411 220 7 105 511 1 388 1.28e-97 301
Msa0645560 AT3G62750.5 39.903 411 220 7 105 511 1 388 1.28e-97 301
Msa0645560 AT3G18070.7 46.519 316 160 6 202 514 1 310 3.30e-92 284
Msa0645560 AT1G61810.2 51.111 270 130 2 37 306 33 300 7.84e-90 278
Msa0645560 AT1G60270.2 47.464 276 138 4 105 377 1 272 1.72e-82 258
Msa0645560 AT3G18070.5 44.672 244 131 3 183 424 94 335 3.34e-66 218
Msa0645560 AT3G18070.5 56.944 72 30 1 28 99 21 91 1.53e-19 90.5
Msa0645560 AT3G18070.6 44.196 224 121 3 202 423 1 222 1.89e-59 196
Msa0645560 AT5G16580.1 36.335 322 176 7 152 468 2 299 1.13e-49 173
Msa0645560 AT3G06510.2 24.661 442 256 14 100 516 159 548 1.38e-29 123
Msa0645560 AT3G06510.1 24.709 429 238 14 100 516 159 514 1.22e-28 120

Find 99 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATTTATATTACTGAAAA+TGG 0.152248 4_3:+50891180 Msa0645560:CDS
TGTTTAATTATATAGGTTTA+TGG 0.152707 4_3:+50890614 Msa0645560:intron
TTCCCAGAAGGCTTCATATT+TGG 0.197275 4_3:+50889562 Msa0645560:CDS
GAATCACCGCCGGTGCAATT+TGG 0.245604 4_3:-50890300 None:intergenic
CACCAGGTCGATGCTCTTCT+TGG 0.247168 4_3:+50890271 Msa0645560:CDS
AATTGCACCGGCGGTGATTC+TGG 0.263758 4_3:+50890303 Msa0645560:CDS
ATCGCTTGAGGAATCTCTTA+TGG 0.285631 4_3:+50891344 Msa0645560:CDS
GTGGAAGAGGACCAAGTATA+TGG 0.292452 4_3:+50889629 Msa0645560:CDS
ACTTTCAGGTTGCTTCAAAT+TGG 0.301411 4_3:+50891091 Msa0645560:intron
AAAGGTTATACCGTAAGATT+TGG 0.307234 4_3:+50891581 Msa0645560:CDS
CAACAACCTCATTAATGAAT+TGG 0.310357 4_3:+50889858 Msa0645560:CDS
TGATAATGTGCAACTAAATA+AGG 0.310787 4_3:-50890333 None:intergenic
GAACTTTGCTTTAAAACATT+TGG 0.321295 4_3:+50890171 Msa0645560:CDS
AGCAAAGTTCCGCATAATCT+TGG 0.329107 4_3:-50890158 None:intergenic
GTCTCTCAAAAGGGTGTGAT+AGG 0.340946 4_3:+50890405 Msa0645560:CDS
GTGCCAAATATGAAGCCTTC+TGG 0.353921 4_3:-50889565 None:intergenic
TTTCAGTAATATAAATTAAA+GGG 0.356229 4_3:-50891176 None:intergenic
TAGACAACAAGAGAGAAAAT+AGG 0.369329 4_3:-50889450 None:intergenic
AGATAACAAACTTGATATAA+AGG 0.370220 4_3:+50890464 Msa0645560:CDS
CCTCCACTTAGTTTCCCATA+TGG 0.373018 4_3:-50889808 None:intergenic
AGAGCTACAGACTTTATGTT+TGG 0.379843 4_3:+50890495 Msa0645560:CDS
CAAACTCTAGAAGATGAATA+TGG 0.381482 4_3:+50890005 Msa0645560:CDS
ATATATTATCTATATGTAAT+TGG 0.387249 4_3:+50891814 Msa0645560:three_prime_UTR
CTCCACTTAGTTTCCCATAT+GGG 0.393326 4_3:-50889807 None:intergenic
TGCAAATAGGTTCATTGAAT+AGG 0.394366 4_3:+50889533 Msa0645560:CDS
TGCCAAATATGAAGCCTTCT+GGG 0.396330 4_3:-50889564 None:intergenic
TATTCATCTTCTAGAGTTTG+AGG 0.401353 4_3:-50890002 None:intergenic
AAAGTATCAAGTCTCTCAAA+AGG 0.412668 4_3:+50890395 Msa0645560:CDS
ATACTTTGCATGGTCTTTGT+TGG 0.413214 4_3:+50891541 Msa0645560:CDS
TGGTCTAGAATACTCCCATA+TGG 0.417024 4_3:+50889793 Msa0645560:CDS
AACGCTGCACCACTGCAAAT+AGG 0.417516 4_3:+50889520 Msa0645560:CDS
AGTTTACAAAAGAGCAATCT+AGG 0.420568 4_3:+50890700 Msa0645560:CDS
TGGTAACCTTGTTCTTACTA+AGG 0.438507 4_3:-50890676 None:intergenic
AGAAAGTCTCGAATTGCTCT+TGG 0.442143 4_3:-50891126 None:intergenic
TGACTCGTATCATCGCTATA+AGG 0.443207 4_3:+50889714 Msa0645560:CDS
ATTAATGAATTGGTGGCAAA+TGG 0.457316 4_3:+50889868 Msa0645560:CDS
CAGGGCTGGTGTAAATGTAA+AGG 0.460153 4_3:+50891517 Msa0645560:intron
TGGATAATCTCCATTGGCTA+AGG 0.461168 4_3:-50890640 None:intergenic
AGTGAATCTGTTAGGTAGCT+AGG 0.464690 4_3:-50890810 None:intergenic
AGAAAGAAAGAACGAATGAA+TGG 0.467242 4_3:-50889338 None:intergenic
AAAAGATATCAAAAGCTCTC+AGG 0.470702 4_3:+50891635 Msa0645560:CDS
GGTTTGCCATTGCTTAATTG+AGG 0.479254 4_3:-50890789 None:intergenic
AACGAGAAAGTGAATCTGTT+AGG 0.479548 4_3:-50890818 None:intergenic
AGGGCTGGTGTAAATGTAAA+GGG 0.484456 4_3:+50891518 Msa0645560:intron
CTACAGACTTTATGTTTGGA+TGG 0.487340 4_3:+50890499 Msa0645560:CDS
GCAGCAAGTGAAGGTGGAAG+AGG 0.487766 4_3:+50889616 Msa0645560:CDS
TTGCCACCAATTCATTAATG+AGG 0.489921 4_3:-50889864 None:intergenic
AACACTTACATTTAGACCAA+TGG 0.493905 4_3:-50890984 None:intergenic
TCATTTATTCTATCTTAATG+AGG 0.494555 4_3:+50891395 Msa0645560:CDS
CAACCTCATTAATGAATTGG+TGG 0.495036 4_3:+50889861 Msa0645560:CDS
TGGGTATGCAAATGGTGAAA+TGG 0.498834 4_3:+50890248 Msa0645560:CDS
CCATGGACTTACAGTCAAGA+TGG 0.502319 4_3:+50890228 Msa0645560:CDS
AGTCAAGATGGGTATGCAAA+TGG 0.507686 4_3:+50890240 Msa0645560:CDS
AAAGGTCATTCCAAATCTTA+CGG 0.508922 4_3:-50891591 None:intergenic
TTCATTATTACTTTAACAGA+AGG 0.515348 4_3:+50889484 Msa0645560:CDS
GGATAATCTCCATTGGCTAA+GGG 0.515711 4_3:-50890639 None:intergenic
CATCGCTATAAGGAAGATGT+TGG 0.525320 4_3:+50889724 Msa0645560:CDS
TTGGAGATAGAGTTAAACAT+TGG 0.530071 4_3:+50890190 Msa0645560:CDS
TGGAAGAGGACCAAGTATAT+GGG 0.531156 4_3:+50889630 Msa0645560:CDS
AATAGGAATGATTTCCCAGA+AGG 0.533501 4_3:+50889550 Msa0645560:CDS
GGTCTAGAATACTCCCATAT+GGG 0.541341 4_3:+50889794 Msa0645560:CDS
TATTTACATACAATTTCAGA+TGG 0.552486 4_3:-50891794 None:intergenic
AAAATCAGTGATGGAAACAA+TGG 0.553564 4_3:+50889679 Msa0645560:CDS
CTCCCATATGGGAAACTAAG+TGG 0.559669 4_3:+50889805 Msa0645560:CDS
TTTATGGATCCCTTAGCCAA+TGG 0.559848 4_3:+50890630 Msa0645560:CDS
TCTTCTGCATATCAGTATGA+AGG 0.560527 4_3:+50889592 Msa0645560:CDS
AAGTATCAAGTCTCTCAAAA+GGG 0.564962 4_3:+50890396 Msa0645560:CDS
TGATCCATCGTTATCGCTTG+AGG 0.566394 4_3:+50891332 Msa0645560:CDS
ATCAAAAGCTCTCAGGATTG+TGG 0.567379 4_3:+50891642 Msa0645560:CDS
GTGAAAGTATCCCATATACT+TGG 0.569026 4_3:-50889640 None:intergenic
TCTCTCAAAAGGGTGTGATA+GGG 0.572590 4_3:+50890406 Msa0645560:CDS
CCATCTTGACTGTAAGTCCA+TGG 0.574320 4_3:-50890228 None:intergenic
GCAAATGGTGAAATGGCACC+AGG 0.576425 4_3:+50890255 Msa0645560:CDS
TGGTTGAATCCAAATTGCAC+CGG 0.581033 4_3:+50890291 Msa0645560:CDS
TTCAATGAACCTATTTGCAG+TGG 0.584960 4_3:-50889529 None:intergenic
TCAAGTTTGTTATCTGAGAG+TGG 0.587930 4_3:-50890456 None:intergenic
AATCATGAAGGATATGAACT+TGG 0.589040 4_3:+50889747 Msa0645560:CDS
GGAAGATGTTGGAATCATGA+AGG 0.590169 4_3:+50889735 Msa0645560:CDS
AACCAAGAAGAGCATCGACC+TGG 0.592148 4_3:-50890273 None:intergenic
AGTGGAGGAATTAATCAAGA+AGG 0.596031 4_3:+50889823 Msa0645560:CDS
CATGGACTTACAGTCAAGAT+GGG 0.596176 4_3:+50890229 Msa0645560:CDS
GAAGGTGCAGCAAGTGAAGG+TGG 0.597164 4_3:+50889610 Msa0645560:CDS
AAAAGATTTCCAAGATTATG+CGG 0.603350 4_3:+50890149 Msa0645560:CDS
TATGAAGGTGCAGCAAGTGA+AGG 0.604375 4_3:+50889607 Msa0645560:CDS
GTATCACTCACATGATGAGA+GGG 0.606257 4_3:-50890040 None:intergenic
GGATAACTTTGAATGAACCA+TGG 0.613780 4_3:+50890211 Msa0645560:CDS
TTCCGTTCCAGAATCACCGC+CGG 0.613932 4_3:-50890310 None:intergenic
CACCGGCGGTGATTCTGGAA+CGG 0.616221 4_3:+50890308 Msa0645560:CDS
TGTATCACTCACATGATGAG+AGG 0.618007 4_3:-50890041 None:intergenic
ATGTAAAGGGATACTTTGCA+TGG 0.626161 4_3:+50891531 Msa0645560:CDS
TTGAATCCAAATTGCACCGG+CGG 0.626765 4_3:+50890294 Msa0645560:CDS
GTGATTGCAGTCGAACGTGA+TGG 0.630848 4_3:+50890956 Msa0645560:intron
GATGCACCTCAATTAAGCAA+TGG 0.645151 4_3:+50890783 Msa0645560:CDS
TGAGAGCCTTAGTAAGAACA+AGG 0.667098 4_3:+50890670 Msa0645560:CDS
GATTCCTCAAGCGATAACGA+TGG 0.674001 4_3:-50891336 None:intergenic
GAGCAATCTAGGCAAGTCAG+TGG 0.682829 4_3:+50890711 Msa0645560:CDS
GGGTGTGATAGGGATAACGT+TGG 0.683347 4_3:+50890416 Msa0645560:CDS
ACTCTAGAAGATGAATATGG+CGG 0.692578 4_3:+50890008 Msa0645560:CDS
CCATATGGGAAACTAAGTGG+AGG 0.694596 4_3:+50889808 Msa0645560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATATATTTAAATTAA+TGG + chr4_3:50890915-50890934 Msa0645560:intron 0.0%
!! ATTTCATTGTTTAATTATAT+AGG + chr4_3:50890607-50890626 Msa0645560:intron 10.0%
!! AAATTAGTAATTAATGAATT+TGG + chr4_3:50891061-50891080 Msa0645560:intron 10.0%
!! TTTCAGTAATATAAATTAAA+GGG - chr4_3:50891179-50891198 None:intergenic 10.0%
!!! TTTTCAGTAATATAAATTAA+AGG - chr4_3:50891180-50891199 None:intergenic 10.0%
!! TTAATTTATATTACTGAAAA+TGG + chr4_3:50891180-50891199 Msa0645560:CDS 10.0%
!! ATATATTATCTATATGTAAT+TGG + chr4_3:50891814-50891833 Msa0645560:three_prime_UTR 10.0%
!! TGTTTAATTATATAGGTTTA+TGG + chr4_3:50890614-50890633 Msa0645560:intron 15.0%
!! GATATAAAATAGATAGTAAT+AGG - chr4_3:50890866-50890885 None:intergenic 15.0%
!!! AATAATTGTTTTTACAACTA+TGG - chr4_3:50891736-50891755 None:intergenic 15.0%
!! TTCATTATTACTTTAACAGA+AGG + chr4_3:50889484-50889503 Msa0645560:CDS 20.0%
!!! ATTTGTAACACTTTTTCATT+GGG + chr4_3:50889974-50889993 Msa0645560:CDS 20.0%
!! AGATAACAAACTTGATATAA+AGG + chr4_3:50890464-50890483 Msa0645560:CDS 20.0%
!!! AATTTGGTTATTTTACTTTC+AGG + chr4_3:50891077-50891096 Msa0645560:intron 20.0%
!! TCATTTATTCTATCTTAATG+AGG + chr4_3:50891395-50891414 Msa0645560:CDS 20.0%
!! TTTCTTGTAATCTAAATACA+GGG + chr4_3:50891499-50891518 Msa0645560:intron 20.0%
!! TATTTACATACAATTTCAGA+TGG - chr4_3:50891797-50891816 None:intergenic 20.0%
!!! CATACAGATTTTCTATTTCT+TGG + chr4_3:50889773-50889792 Msa0645560:CDS 25.0%
!!! CAATGAAAAAGTGTTACAAA+TGG - chr4_3:50889975-50889994 None:intergenic 25.0%
!!! CATTTGTAACACTTTTTCAT+TGG + chr4_3:50889973-50889992 Msa0645560:CDS 25.0%
! AAAAGATTTCCAAGATTATG+CGG + chr4_3:50890149-50890168 Msa0645560:CDS 25.0%
!!! GAACTTTGCTTTAAAACATT+TGG + chr4_3:50890171-50890190 Msa0645560:CDS 25.0%
!! TGATAATGTGCAACTAAATA+AGG - chr4_3:50890336-50890355 None:intergenic 25.0%
! ACTTATTCCAAATTAACACA+AGG + chr4_3:50890559-50890578 Msa0645560:intron 25.0%
! TATATCTCCTTGTGTTAATT+TGG - chr4_3:50890569-50890588 None:intergenic 25.0%
!!! AGTGGTTCATTTGATTTTAT+TGG + chr4_3:50890729-50890748 Msa0645560:CDS 25.0%
! GCAACAACTTAAATGTTATT+TGG + chr4_3:50891029-50891048 Msa0645560:intron 25.0%
!!! AACTTTTTCATAATGTGTGT+AGG + chr4_3:50891294-50891313 Msa0645560:intron 25.0%
! CTTTCTTGTAATCTAAATAC+AGG + chr4_3:50891498-50891517 Msa0645560:intron 25.0%
! ACCTTTGTAGATTACAAAAA+TGG + chr4_3:50891608-50891627 Msa0645560:CDS 25.0%
!!! ACCATTTTTGTAATCTACAA+AGG - chr4_3:50891612-50891631 None:intergenic 25.0%
!! AATTTTGTTGCACTGTTAAA+TGG - chr4_3:50891702-50891721 None:intergenic 25.0%
AGAAAGAAAGAACGAATGAA+TGG - chr4_3:50889341-50889360 None:intergenic 30.0%
TAGACAACAAGAGAGAAAAT+AGG - chr4_3:50889453-50889472 None:intergenic 30.0%
TGCAAATAGGTTCATTGAAT+AGG + chr4_3:50889533-50889552 Msa0645560:CDS 30.0%
TATCCTCAAAAAATCAGTGA+TGG + chr4_3:50889670-50889689 Msa0645560:CDS 30.0%
!!! TTTCCATCACTGATTTTTTG+AGG - chr4_3:50889676-50889695 None:intergenic 30.0%
! AAAATCAGTGATGGAAACAA+TGG + chr4_3:50889679-50889698 Msa0645560:CDS 30.0%
AATCATGAAGGATATGAACT+TGG + chr4_3:50889747-50889766 Msa0645560:CDS 30.0%
CAACAACCTCATTAATGAAT+TGG + chr4_3:50889858-50889877 Msa0645560:CDS 30.0%
! ATTAATGAATTGGTGGCAAA+TGG + chr4_3:50889868-50889887 Msa0645560:CDS 30.0%
!! TATTCATCTTCTAGAGTTTG+AGG - chr4_3:50890005-50890024 None:intergenic 30.0%
! CAAACTCTAGAAGATGAATA+TGG + chr4_3:50890005-50890024 Msa0645560:CDS 30.0%
TTGGAGATAGAGTTAAACAT+TGG + chr4_3:50890190-50890209 Msa0645560:CDS 30.0%
! AAAGTATCAAGTCTCTCAAA+AGG + chr4_3:50890395-50890414 Msa0645560:CDS 30.0%
AAGTATCAAGTCTCTCAAAA+GGG + chr4_3:50890396-50890415 Msa0645560:CDS 30.0%
!!! GTTTTTTGGATAATCTCCAT+TGG - chr4_3:50890649-50890668 None:intergenic 30.0%
! GATTGCTCTTTTGTAAACTT+TGG - chr4_3:50890699-50890718 None:intergenic 30.0%
AGTTTACAAAAGAGCAATCT+AGG + chr4_3:50890700-50890719 Msa0645560:CDS 30.0%
! TTTTCATGTAAGCATCCATT+TGG + chr4_3:50890840-50890859 Msa0645560:intron 30.0%
ATAGATAGTAATAGGCCAAA+TGG - chr4_3:50890858-50890877 None:intergenic 30.0%
AACACTTACATTTAGACCAA+TGG - chr4_3:50890987-50891006 None:intergenic 30.0%
! TTGCATGTTGGAAATTTTGA+GGG - chr4_3:50891013-50891032 None:intergenic 30.0%
!! ACATTTAAGTTGTTGCATGT+TGG - chr4_3:50891025-50891044 None:intergenic 30.0%
GTCTATTTCACTTTCTTTCA+TGG + chr4_3:50891456-50891475 Msa0645560:intron 30.0%
! CTTTGTTGGACAATTTTGAA+TGG + chr4_3:50891555-50891574 Msa0645560:CDS 30.0%
AAAGGTTATACCGTAAGATT+TGG + chr4_3:50891581-50891600 Msa0645560:CDS 30.0%
AAAGGTCATTCCAAATCTTA+CGG - chr4_3:50891594-50891613 None:intergenic 30.0%
AAAAGATATCAAAAGCTCTC+AGG + chr4_3:50891635-50891654 Msa0645560:CDS 30.0%
GATGACGATGACAAAAACAA+GGG - chr4_3:50889386-50889405 None:intergenic 35.0%
! TGATGACGATGACAAAAACA+AGG - chr4_3:50889387-50889406 None:intergenic 35.0%
TTCAATGAACCTATTTGCAG+TGG - chr4_3:50889532-50889551 None:intergenic 35.0%
AATAGGAATGATTTCCCAGA+AGG + chr4_3:50889550-50889569 Msa0645560:CDS 35.0%
TCTTCTGCATATCAGTATGA+AGG + chr4_3:50889592-50889611 Msa0645560:CDS 35.0%
!! GTGAAAGTATCCCATATACT+TGG - chr4_3:50889643-50889662 None:intergenic 35.0%
AGTGGAGGAATTAATCAAGA+AGG + chr4_3:50889823-50889842 Msa0645560:CDS 35.0%
CAACCTCATTAATGAATTGG+TGG + chr4_3:50889861-50889880 Msa0645560:CDS 35.0%
TTGCCACCAATTCATTAATG+AGG - chr4_3:50889867-50889886 None:intergenic 35.0%
! ACTCTAGAAGATGAATATGG+CGG + chr4_3:50890008-50890027 Msa0645560:CDS 35.0%
GGATAACTTTGAATGAACCA+TGG + chr4_3:50890211-50890230 Msa0645560:CDS 35.0%
!! TCAAGTTTGTTATCTGAGAG+TGG - chr4_3:50890459-50890478 None:intergenic 35.0%
AGAGCTACAGACTTTATGTT+TGG + chr4_3:50890495-50890514 Msa0645560:CDS 35.0%
CTACAGACTTTATGTTTGGA+TGG + chr4_3:50890499-50890518 Msa0645560:CDS 35.0%
!!! ACTAAGGCTCTCATGTTTTT+TGG - chr4_3:50890663-50890682 None:intergenic 35.0%
TGGTAACCTTGTTCTTACTA+AGG - chr4_3:50890679-50890698 None:intergenic 35.0%
AACGAGAAAGTGAATCTGTT+AGG - chr4_3:50890821-50890840 None:intergenic 35.0%
! GTTGCATGTTGGAAATTTTG+AGG - chr4_3:50891014-50891033 None:intergenic 35.0%
!! ACTTTCAGGTTGCTTCAAAT+TGG + chr4_3:50891091-50891110 Msa0645560:intron 35.0%
TTGTAATCTAAATACAGGGC+TGG + chr4_3:50891503-50891522 Msa0645560:intron 35.0%
ATGTAAAGGGATACTTTGCA+TGG + chr4_3:50891531-50891550 Msa0645560:CDS 35.0%
ATACTTTGCATGGTCTTTGT+TGG + chr4_3:50891541-50891560 Msa0645560:CDS 35.0%
! GACAATTTTGAATGGCACAA+AGG + chr4_3:50891563-50891582 Msa0645560:CDS 35.0%
TTCCCAGAAGGCTTCATATT+TGG + chr4_3:50889562-50889581 Msa0645560:CDS 40.0%
TGCCAAATATGAAGCCTTCT+GGG - chr4_3:50889567-50889586 None:intergenic 40.0%
TGGAAGAGGACCAAGTATAT+GGG + chr4_3:50889630-50889649 Msa0645560:CDS 40.0%
TGACTCGTATCATCGCTATA+AGG + chr4_3:50889714-50889733 Msa0645560:CDS 40.0%
CATCGCTATAAGGAAGATGT+TGG + chr4_3:50889724-50889743 Msa0645560:CDS 40.0%
GGAAGATGTTGGAATCATGA+AGG + chr4_3:50889735-50889754 Msa0645560:CDS 40.0%
! TGGTCTAGAATACTCCCATA+TGG + chr4_3:50889793-50889812 Msa0645560:CDS 40.0%
! GGTCTAGAATACTCCCATAT+GGG + chr4_3:50889794-50889813 Msa0645560:CDS 40.0%
CTCCACTTAGTTTCCCATAT+GGG - chr4_3:50889810-50889829 None:intergenic 40.0%
ATATAGCCATCTCATGTCAC+AGG + chr4_3:50889942-50889961 Msa0645560:intron 40.0%
GTATCACTCACATGATGAGA+GGG - chr4_3:50890043-50890062 None:intergenic 40.0%
TGTATCACTCACATGATGAG+AGG - chr4_3:50890044-50890063 None:intergenic 40.0%
AGCAAAGTTCCGCATAATCT+TGG - chr4_3:50890161-50890180 None:intergenic 40.0%
CATGGACTTACAGTCAAGAT+GGG + chr4_3:50890229-50890248 Msa0645560:CDS 40.0%
AGTCAAGATGGGTATGCAAA+TGG + chr4_3:50890240-50890259 Msa0645560:CDS 40.0%
TGGGTATGCAAATGGTGAAA+TGG + chr4_3:50890248-50890267 Msa0645560:CDS 40.0%
TGGTTGAATCCAAATTGCAC+CGG + chr4_3:50890291-50890310 Msa0645560:CDS 40.0%
! TCTCTCAAAAGGGTGTGATA+GGG + chr4_3:50890406-50890425 Msa0645560:CDS 40.0%
TTTATGGATCCCTTAGCCAA+TGG + chr4_3:50890630-50890649 Msa0645560:CDS 40.0%
! GGATAATCTCCATTGGCTAA+GGG - chr4_3:50890642-50890661 None:intergenic 40.0%
! TGGATAATCTCCATTGGCTA+AGG - chr4_3:50890643-50890662 None:intergenic 40.0%
TGAGAGCCTTAGTAAGAACA+AGG + chr4_3:50890670-50890689 Msa0645560:CDS 40.0%
GATGCACCTCAATTAAGCAA+TGG + chr4_3:50890783-50890802 Msa0645560:CDS 40.0%
GGTTTGCCATTGCTTAATTG+AGG - chr4_3:50890792-50890811 None:intergenic 40.0%
AGTGAATCTGTTAGGTAGCT+AGG - chr4_3:50890813-50890832 None:intergenic 40.0%
! GAACGTGATGGAAAAACCAT+TGG + chr4_3:50890968-50890987 Msa0645560:CDS 40.0%
AGAAAGTCTCGAATTGCTCT+TGG - chr4_3:50891129-50891148 None:intergenic 40.0%
ATCGCTTGAGGAATCTCTTA+TGG + chr4_3:50891344-50891363 Msa0645560:CDS 40.0%
! AGGGCTGGTGTAAATGTAAA+GGG + chr4_3:50891518-50891537 Msa0645560:intron 40.0%
ATCAAAAGCTCTCAGGATTG+TGG + chr4_3:50891642-50891661 Msa0645560:CDS 40.0%
CGATGACAAAAACAAGGGTG+CGG - chr4_3:50889381-50889400 None:intergenic 45.0%
GTGCCAAATATGAAGCCTTC+TGG - chr4_3:50889568-50889587 None:intergenic 45.0%
! TATGAAGGTGCAGCAAGTGA+AGG + chr4_3:50889607-50889626 Msa0645560:CDS 45.0%
GTGGAAGAGGACCAAGTATA+TGG + chr4_3:50889629-50889648 Msa0645560:CDS 45.0%
CTCCCATATGGGAAACTAAG+TGG + chr4_3:50889805-50889824 Msa0645560:CDS 45.0%
CCTCCACTTAGTTTCCCATA+TGG - chr4_3:50889811-50889830 None:intergenic 45.0%
CCATATGGGAAACTAAGTGG+AGG + chr4_3:50889808-50889827 Msa0645560:CDS 45.0%
TGCAAACCTGTGACATGAGA+TGG - chr4_3:50889951-50889970 None:intergenic 45.0%
CCATCTTGACTGTAAGTCCA+TGG - chr4_3:50890231-50890250 None:intergenic 45.0%
CCATGGACTTACAGTCAAGA+TGG + chr4_3:50890228-50890247 Msa0645560:CDS 45.0%
TTGAATCCAAATTGCACCGG+CGG + chr4_3:50890294-50890313 Msa0645560:CDS 45.0%
! GTCTCTCAAAAGGGTGTGAT+AGG + chr4_3:50890405-50890424 Msa0645560:CDS 45.0%
TGATCCATCGTTATCGCTTG+AGG + chr4_3:50891332-50891351 Msa0645560:CDS 45.0%
GATTCCTCAAGCGATAACGA+TGG - chr4_3:50891339-50891358 None:intergenic 45.0%
! CAGGGCTGGTGTAAATGTAA+AGG + chr4_3:50891517-50891536 Msa0645560:intron 45.0%
AACGCTGCACCACTGCAAAT+AGG + chr4_3:50889520-50889539 Msa0645560:CDS 50.0%
GCAAATGGTGAAATGGCACC+AGG + chr4_3:50890255-50890274 Msa0645560:CDS 50.0%
!! AACCAAGAAGAGCATCGACC+TGG - chr4_3:50890276-50890295 None:intergenic 50.0%
GGGTGTGATAGGGATAACGT+TGG + chr4_3:50890416-50890435 Msa0645560:CDS 50.0%
GAGCAATCTAGGCAAGTCAG+TGG + chr4_3:50890711-50890730 Msa0645560:CDS 50.0%
GTGATTGCAGTCGAACGTGA+TGG + chr4_3:50890956-50890975 Msa0645560:intron 50.0%
! GAAGGTGCAGCAAGTGAAGG+TGG + chr4_3:50889610-50889629 Msa0645560:CDS 55.0%
GCAGCAAGTGAAGGTGGAAG+AGG + chr4_3:50889616-50889635 Msa0645560:CDS 55.0%
CACCAGGTCGATGCTCTTCT+TGG + chr4_3:50890271-50890290 Msa0645560:CDS 55.0%
GAATCACCGCCGGTGCAATT+TGG - chr4_3:50890303-50890322 None:intergenic 55.0%
! AATTGCACCGGCGGTGATTC+TGG + chr4_3:50890303-50890322 Msa0645560:CDS 55.0%
TTCCGTTCCAGAATCACCGC+CGG - chr4_3:50890313-50890332 None:intergenic 55.0%
! CACCGGCGGTGATTCTGGAA+CGG + chr4_3:50890308-50890327 Msa0645560:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 50889337 50891839 50889337 ID=Msa0645560;Name=Msa0645560
chr4_3 mRNA 50889337 50891839 50889337 ID=Msa0645560-mRNA-1;Parent=Msa0645560;Name=Msa0645560-mRNA-1;_AED=0.11;_eAED=0.11;_QI=102|1|1|1|1|1|8|133|519
chr4_3 exon 50889337 50889889 50889337 ID=Msa0645560-mRNA-1:exon:12210;Parent=Msa0645560-mRNA-1
chr4_3 exon 50889964 50890051 50889964 ID=Msa0645560-mRNA-1:exon:12211;Parent=Msa0645560-mRNA-1
chr4_3 exon 50890149 50890520 50890149 ID=Msa0645560-mRNA-1:exon:12212;Parent=Msa0645560-mRNA-1
chr4_3 exon 50890629 50890846 50890629 ID=Msa0645560-mRNA-1:exon:12213;Parent=Msa0645560-mRNA-1
chr4_3 exon 50890966 50890997 50890966 ID=Msa0645560-mRNA-1:exon:12214;Parent=Msa0645560-mRNA-1
chr4_3 exon 50891099 50891201 50891099 ID=Msa0645560-mRNA-1:exon:12215;Parent=Msa0645560-mRNA-1
chr4_3 exon 50891316 50891424 50891316 ID=Msa0645560-mRNA-1:exon:12216;Parent=Msa0645560-mRNA-1
chr4_3 exon 50891520 50891839 50891520 ID=Msa0645560-mRNA-1:exon:12217;Parent=Msa0645560-mRNA-1
chr4_3 five_prime_UTR 50889337 50889438 50889337 ID=Msa0645560-mRNA-1:five_prime_utr;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50889439 50889889 50889439 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50889964 50890051 50889964 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50890149 50890520 50890149 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50890629 50890846 50890629 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50890966 50890997 50890966 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50891099 50891201 50891099 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50891316 50891424 50891316 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 CDS 50891520 50891706 50891520 ID=Msa0645560-mRNA-1:cds;Parent=Msa0645560-mRNA-1
chr4_3 three_prime_UTR 50891707 50891839 50891707 ID=Msa0645560-mRNA-1:three_prime_utr;Parent=Msa0645560-mRNA-1
Gene Sequence

>Msa0645560

ATGAGATATTTCCTATTTTCTCTCTTGTTGTCTATAGTTTCAACATTCATTATTACTTTAACAGAAGGTCAAGAAATAATTAACGCTGCACCACTGCAAATAGGTTCATTGAATAGGAATGATTTCCCAGAAGGCTTCATATTTGGCACAGCATCTTCTGCATATCAGTATGAAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACTTTCACTCATAGATATCCTCAAAAAATCAGTGATGGAAACAATGGAGACGTTGCAGTTGACTCGTATCATCGCTATAAGGAAGATGTTGGAATCATGAAGGATATGAACTTGGATGCATACAGATTTTCTATTTCTTGGTCTAGAATACTCCCATATGGGAAACTAAGTGGAGGAATTAATCAAGAAGGAATCGACTATTACAACAACCTCATTAATGAATTGGTGGCAAATGGTTTGCAACCATTTGTAACACTTTTTCATTGGGATCTTCCTCAAACTCTAGAAGATGAATATGGCGGTTTCTTAAGCCCTCTCATCATAAAAGATTTCCAAGATTATGCGGAACTTTGCTTTAAAACATTTGGAGATAGAGTTAAACATTGGATAACTTTGAATGAACCATGGACTTACAGTCAAGATGGGTATGCAAATGGTGAAATGGCACCAGGTCGATGCTCTTCTTGGTTGAATCCAAATTGCACCGGCGGTGATTCTGGAACGGAACCTTATTTAGTTGCACATTATCAACTTCTAGCTCATGCAACAGTTGTTAATTTATACAAGACAAAGTATCAAGTCTCTCAAAAGGGTGTGATAGGGATAACGTTGGTTATTAACTATTTTGTGCCACTCTCAGATAACAAACTTGATATAAAGGCTGCTGAAAGAGCTACAGACTTTATGTTTGGATGGTTTATGGATCCCTTAGCCAATGGAGATTATCCAAAAAACATGAGAGCCTTAGTAAGAACAAGGTTACCAAAGTTTACAAAAGAGCAATCTAGGCAAGTCAGTGGTTCATTTGATTTTATTGGCATAAATTACTACTCTTCATGTTATGCTTCTGATGCACCTCAATTAAGCAATGGCAAACCTAGCTACCTAACAGATTCACTTTCTCGTTTTTCATTCGAACGTGATGGAAAAACCATTGGTCTAAATGTTGCTTCAAATTGGTTGTATGTTTATCCAAGAGCAATTCGAGACTTTCTGATACAAGTTAAAGAAAAATATAACAACCCTTTAATTTATATTACTGAAAATGGTATTAATGAGTACGATGATCCATCGTTATCGCTTGAGGAATCTCTTATGGATACGTATAGAGTTGATTATCATTATCGTCATTTATTCTATCTTAATGAGGCAATCAAGGCTGGTGTAAATGTAAAGGGATACTTTGCATGGTCTTTGTTGGACAATTTTGAATGGCACAAAGGTTATACCGTAAGATTTGGAATGACCTTTGTAGATTACAAAAATGGTTTGAAAAGATATCAAAAGCTCTCAGGATTGTGGTTCAAGAATTTTCTCACATCAGAGAACATAGATTCCATTTAA
Protein sequence

>Msa0645560

MRYFLFSLLLSIVSTFIITLTEGQEIINAAPLQIGSLNRNDFPEGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPQKISDGNNGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRILPYGKLSGGINQEGIDYYNNLINELVANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKHWITLNEPWTYSQDGYANGEMAPGRCSSWLNPNCTGGDSGTEPYLVAHYQLLAHATVVNLYKTKYQVSQKGVIGITLVINYFVPLSDNKLDIKAAERATDFMFGWFMDPLANGDYPKNMRALVRTRLPKFTKEQSRQVSGSFDFIGINYYSSCYASDAPQLSNGKPSYLTDSLSRFSFERDGKTIGLNVASNWLYVYPRAIRDFLIQVKEKYNNPLIYITENGINEYDDPSLSLEESLMDTYRVDYHYRHLFYLNEAIKAGVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFKNFLTSENIDSI*