AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0549140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0549140 MtrunA17_Chr4g0033401 95.210 501 11 3 432 919 20 520 0.0 976
Msa0549140 MtrunA17_Chr4g0033401 76.721 494 44 4 5 430 1 491 0.0 758
Msa0549140 MtrunA17_Chr4g0033321 94.685 508 13 4 425 919 13 519 0.0 976
Msa0549140 MtrunA17_Chr4g0033321 77.328 494 40 5 5 430 1 490 0.0 760
Msa0549140 MtrunA17_Chr4g0033331 86.454 502 54 4 431 919 24 524 0.0 890
Msa0549140 MtrunA17_Chr4g0033331 82.731 498 16 4 1 430 1 496 0.0 797
Msa0549140 MtrunA17_Chr4g0033311 75.665 489 106 3 441 916 34 522 0.0 789
Msa0549140 MtrunA17_Chr4g0033311 72.018 436 78 2 39 430 61 496 0.0 661
Msa0549140 MtrunA17_Chr3g0088441 71.680 512 131 4 419 916 10 521 0.0 778
Msa0549140 MtrunA17_Chr3g0088441 63.838 495 112 4 3 430 1 495 0.0 648
Msa0549140 MtrunA17_Chr2g0329201 71.250 480 125 3 441 907 26 505 0.0 713
Msa0549140 MtrunA17_Chr2g0329201 64.679 436 110 2 39 430 53 488 0.0 589
Msa0549140 MtrunA17_Chr2g0329191 70.000 480 130 4 441 907 29 507 0.0 700
Msa0549140 MtrunA17_Chr2g0329191 62.615 436 118 3 39 430 56 490 0.0 578
Msa0549140 MtrunA17_Chr6g0482131 70.378 476 128 3 445 907 35 510 0.0 699
Msa0549140 MtrunA17_Chr6g0482131 63.761 436 114 2 39 430 58 493 0.0 584
Msa0549140 MtrunA17_Chr4g0033191 66.597 479 147 3 442 907 39 517 0.0 680
Msa0549140 MtrunA17_Chr4g0033191 64.531 437 111 2 39 431 65 501 0.0 599
Msa0549140 MtrunA17_Chr6g0482071 67.842 482 140 4 446 914 37 516 0.0 674
Msa0549140 MtrunA17_Chr6g0482071 63.073 436 117 2 39 430 59 494 0.0 562
Msa0549140 MtrunA17_Chr4g0033201 65.553 479 152 3 442 907 32 510 0.0 667
Msa0549140 MtrunA17_Chr4g0033201 62.844 436 118 2 39 430 58 493 0.0 583
Msa0549140 MtrunA17_Chr4g0033271 66.526 475 146 3 446 907 35 509 0.0 665
Msa0549140 MtrunA17_Chr4g0033271 62.615 436 119 2 39 430 57 492 0.0 572
Msa0549140 MtrunA17_Chr6g0482081 68.763 477 135 4 445 907 35 511 0.0 663
Msa0549140 MtrunA17_Chr6g0482081 62.929 437 117 3 39 430 58 494 0.0 548
Msa0549140 MtrunA17_Chr4g0033341 64.097 493 158 6 432 910 57 544 0.0 661
Msa0549140 MtrunA17_Chr4g0033341 62.014 437 118 3 39 430 91 524 0.0 564
Msa0549140 MtrunA17_Chr2g0329321 65.208 480 128 4 441 907 33 486 0.0 649
Msa0549140 MtrunA17_Chr2g0329321 57.339 436 116 3 39 430 60 469 3.30e-176 519
Msa0549140 MtrunA17_Chr4g0033261 62.971 478 136 5 445 907 40 491 0.0 603
Msa0549140 MtrunA17_Chr4g0033261 57.763 438 113 4 39 430 63 474 2.94e-167 496
Msa0549140 MtrunA17_Chr4g0033231 61.506 478 143 5 445 907 40 491 0.0 594
Msa0549140 MtrunA17_Chr4g0033231 57.078 438 116 4 39 430 63 474 3.35e-166 494
Msa0549140 MtrunA17_Chr4g0010501 59.874 476 172 6 445 907 23 492 0.0 577
Msa0549140 MtrunA17_Chr4g0010501 54.587 436 148 5 39 430 46 475 5.56e-162 483
Msa0549140 MtrunA17_Chr5g0430451 60.081 496 150 5 434 907 27 496 0.0 577
Msa0549140 MtrunA17_Chr5g0430451 55.188 453 124 3 32 431 54 480 3.38e-157 471
Msa0549140 MtrunA17_Chr3g0087261 54.082 490 206 7 432 907 23 507 1.76e-177 523
Msa0549140 MtrunA17_Chr3g0087261 50.783 447 169 7 31 431 50 491 1.12e-145 441
Msa0549140 MtrunA17_Chr4g0006111 53.984 502 178 10 431 907 50 523 3.34e-176 521
Msa0549140 MtrunA17_Chr4g0006111 50.334 449 139 8 39 431 87 507 1.87e-142 434
Msa0549140 MtrunA17_Chr3g0087271 52.201 477 211 6 444 907 36 508 9.34e-171 506
Msa0549140 MtrunA17_Chr3g0087271 48.533 443 179 6 31 428 51 489 2.02e-139 425
Msa0549140 MtrunA17_Chr4g0006131 54.938 486 167 12 446 907 42 499 8.62e-167 496
Msa0549140 MtrunA17_Chr4g0006131 48.989 445 147 7 39 430 64 481 2.78e-135 414
Msa0549140 MtrunA17_Chr4g0043091 52.599 481 206 8 444 907 26 501 9.80e-167 496
Msa0549140 MtrunA17_Chr4g0043091 47.640 445 170 6 39 430 50 484 5.69e-134 411
Msa0549140 MtrunA17_Chr4g0042171 50.000 486 224 8 445 914 23 505 8.86e-152 457
Msa0549140 MtrunA17_Chr4g0042171 45.516 446 189 6 39 435 46 486 8.16e-122 379
Msa0549140 MtrunA17_Chr6g0482941 47.515 503 242 9 421 909 18 512 1.74e-150 454
Msa0549140 MtrunA17_Chr6g0482941 44.719 445 193 8 31 429 56 493 3.44e-120 375
Msa0549140 MtrunA17_Chr6g0482951 47.117 503 244 9 421 909 18 512 6.87e-150 452
Msa0549140 MtrunA17_Chr6g0482951 44.270 445 195 8 31 429 56 493 9.61e-120 374
Msa0549140 MtrunA17_Chr2g0301231 56.763 414 134 8 512 907 4 390 2.59e-148 444
Msa0549140 MtrunA17_Chr2g0301231 51.000 400 115 7 85 430 1 373 2.49e-121 374
Msa0549140 MtrunA17_Chr3g0090111 47.817 481 224 8 446 913 19 485 7.15e-142 431
Msa0549140 MtrunA17_Chr3g0090111 44.072 447 187 8 31 430 32 462 3.13e-119 372
Msa0549140 MtrunA17_Chr3g0090131 48.033 483 224 8 445 913 20 489 5.18e-141 429
Msa0549140 MtrunA17_Chr3g0090131 44.045 445 191 7 31 430 34 465 1.28e-118 370
Msa0549140 MtrunA17_Chr4g0074561 47.390 479 222 8 451 907 40 510 5.30e-139 425
Msa0549140 MtrunA17_Chr4g0074561 44.773 440 189 5 39 428 57 492 1.74e-118 371
Msa0549140 MtrunA17_Chr2g0288071 47.689 476 231 7 455 915 76 548 4.28e-136 418
Msa0549140 MtrunA17_Chr2g0288071 44.191 439 191 5 39 428 89 522 1.14e-116 367
Msa0549140 MtrunA17_Chr4g0074551 46.154 481 240 8 451 916 55 531 2.76e-134 414
Msa0549140 MtrunA17_Chr4g0074551 43.964 439 197 6 39 431 72 507 4.46e-114 361
Msa0549140 MtrunA17_Chr4g0006971 46.042 480 230 10 445 909 26 491 6.21e-130 401
Msa0549140 MtrunA17_Chr4g0006971 42.664 443 198 8 32 430 41 471 1.02e-102 329
Msa0549140 MtrunA17_Chr2g0317821 43.699 492 251 10 446 919 32 515 7.28e-129 398
Msa0549140 MtrunA17_Chr2g0317821 42.212 443 205 7 32 427 46 484 2.99e-108 344
Msa0549140 MtrunA17_Chr2g0317841 42.886 492 255 10 446 919 32 515 1.14e-128 398
Msa0549140 MtrunA17_Chr2g0317841 41.309 443 209 7 32 427 46 484 1.36e-108 345
Msa0549140 MtrunA17_Chr7g0242681 46.074 484 217 12 446 907 38 499 4.03e-128 396
Msa0549140 MtrunA17_Chr7g0242681 41.556 450 192 11 32 430 52 481 3.63e-104 333
Msa0549140 MtrunA17_Chr7g0242691 44.770 478 235 9 445 907 30 493 1.89e-127 394
Msa0549140 MtrunA17_Chr7g0242691 38.763 485 232 7 1 430 1 475 3.69e-103 330
Msa0549140 MtrunA17_Chr2g0288021 43.633 479 251 8 445 908 34 508 8.68e-124 385
Msa0549140 MtrunA17_Chr2g0288021 41.055 436 208 6 39 428 57 489 2.01e-104 334
Msa0549140 MtrunA17_Chr1g0195611 44.699 481 225 11 447 907 28 487 4.95e-121 377
Msa0549140 MtrunA17_Chr1g0195611 42.825 446 189 11 33 430 42 469 8.07e-100 322
Msa0549140 MtrunA17_Chr5g0428831 43.852 488 232 12 441 907 22 488 4.65e-119 372
Msa0549140 MtrunA17_Chr5g0428831 42.188 448 190 11 33 430 42 470 1.34e-101 326
Msa0549140 MtrunA17_Chr3g0087201 54.683 331 137 4 585 907 17 342 8.53e-119 365
Msa0549140 MtrunA17_Chr3g0087201 49.045 314 111 4 161 430 17 325 7.57e-95 302
Msa0549140 MtrunA17_Chr7g0234111 42.887 478 240 9 447 910 76 534 2.76e-111 352
Msa0549140 MtrunA17_Chr7g0234111 40.308 454 205 9 33 439 90 524 1.59e-89 295
Msa0549140 MtrunA17_Chr5g0418871 57.525 299 111 5 465 750 2 297 1.11e-110 344
Msa0549140 MtrunA17_Chr5g0418871 52.703 296 96 3 39 293 5 297 8.02e-100 315
Msa0549140 MtrunA17_Chr7g0234091 41.494 482 247 8 447 913 76 537 5.25e-109 347
Msa0549140 MtrunA17_Chr7g0234091 39.955 443 204 7 32 430 90 514 3.33e-90 296
Msa0549140 MtrunA17_Chr7g0234131 41.250 480 248 9 447 911 76 536 2.99e-107 342
Msa0549140 MtrunA17_Chr7g0234131 38.530 449 211 7 33 435 91 520 5.52e-86 285
Msa0549140 MtrunA17_Chr1g0195641 46.547 391 175 9 448 819 29 404 5.96e-102 323
Msa0549140 MtrunA17_Chr1g0195641 44.149 376 148 10 33 359 42 404 3.09e-87 285
Msa0549140 MtrunA17_Chr7g0230651 41.953 379 183 8 493 854 18 376 2.00e-84 276
Msa0549140 MtrunA17_Chr7g0230651 39.084 371 172 5 64 393 18 375 7.82e-75 250
Msa0549140 MtrunA17_Chr3g0087191 75.862 145 30 1 445 584 21 165 3.71e-73 238
Msa0549140 MtrunA17_Chr3g0087191 61.677 167 48 2 8 160 1 165 1.56e-64 214
Msa0549140 MtrunA17_Chr7g0236731 46.000 250 120 4 529 769 27 270 1.72e-54 191
Msa0549140 MtrunA17_Chr7g0236731 40.078 257 105 4 106 320 28 277 7.91e-44 160
Msa0549140 MtrunA17_Chr7g0227561 38.290 269 115 7 447 701 47 278 7.30e-50 178
Msa0549140 MtrunA17_Chr7g0227561 36.239 218 99 4 31 244 59 240 2.66e-39 148
Msa0549140 MtrunA17_Chr4g0068871 27.717 368 207 12 81 427 183 512 2.06e-27 119
Msa0549140 MtrunA17_Chr4g0068871 26.316 418 217 13 511 909 189 534 1.09e-26 116
Msa0549140 MtrunA17_Chr5g0418861 50.549 91 44 1 819 908 1 91 1.66e-23 95.5
Msa0549140 MtrunA17_Chr5g0418861 50.685 73 35 1 359 430 1 73 2.24e-16 75.1
Msa0549140 MtrunA17_Chr8g0352881 45.833 96 49 1 662 754 57 152 3.77e-20 88.6
Msa0549140 MtrunA17_Chr8g0352881 55.556 54 23 1 455 508 7 59 3.73e-13 68.2
Msa0549140 MtrunA17_Chr7g0227591 50.909 55 27 0 856 910 14 68 1.47e-12 63.5
Msa0549140 MtrunA17_Chr2g0288031 47.458 59 30 1 592 650 3 60 6.05e-11 58.9
Msa0549140 MtrunA17_Chr2g0288031 47.458 59 30 1 168 226 3 60 7.14e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0549140 AT2G44450.1 55.252 476 195 5 446 908 31 501 0.0 541
Msa0549140 AT2G44450.1 52.596 443 160 5 33 430 46 483 1.55e-159 477
Msa0549140 AT5G44640.1 53.550 493 210 6 434 912 19 506 0.0 539
Msa0549140 AT5G44640.1 49.393 494 172 8 5 430 1 484 2.16e-159 477
Msa0549140 AT5G42260.1 55.508 472 191 6 446 903 31 497 0.0 534
Msa0549140 AT5G42260.1 52.489 442 159 6 33 428 46 482 4.63e-158 474
Msa0549140 AT3G60130.1 54.832 476 196 6 446 907 30 500 1.89e-180 531
Msa0549140 AT3G60130.1 51.030 437 164 5 39 430 52 483 1.37e-151 457
Msa0549140 AT2G44480.1 52.917 480 212 4 445 911 34 512 3.80e-178 526
Msa0549140 AT2G44480.1 50.783 447 175 3 39 441 57 502 9.37e-157 471
Msa0549140 AT2G44480.3 52.917 480 212 4 445 911 65 543 8.82e-178 526
Msa0549140 AT2G44480.3 50.783 447 175 3 39 441 88 533 2.20e-156 471
Msa0549140 AT2G25630.1 52.352 489 197 7 434 908 18 484 1.36e-170 505
Msa0549140 AT2G25630.1 50.562 445 152 7 33 431 45 467 7.34e-148 446
Msa0549140 AT5G24550.1 51.943 489 217 8 446 917 32 519 1.16e-169 504
Msa0549140 AT5G24550.1 49.091 440 175 4 39 430 54 492 6.62e-144 438
Msa0549140 AT5G24540.1 52.352 489 215 8 446 917 32 519 1.34e-165 494
Msa0549140 AT5G24540.1 48.636 440 177 6 39 430 54 492 6.25e-138 422
Msa0549140 AT3G60140.1 49.687 479 224 7 445 907 25 502 1.47e-163 490
Msa0549140 AT3G60140.1 44.851 437 193 4 39 428 48 483 1.63e-132 410
Msa0549140 AT1G51470.1 52.401 479 201 10 445 908 44 510 3.62e-161 482
Msa0549140 AT1G51470.1 48.423 444 172 8 33 430 60 492 1.31e-133 410
Msa0549140 AT1G26560.1 50.830 482 214 9 446 909 32 508 7.58e-160 478
Msa0549140 AT1G26560.1 46.259 441 183 6 39 430 54 489 3.39e-129 399
Msa0549140 AT1G47600.1 51.775 479 204 10 445 908 44 510 1.31e-158 475
Msa0549140 AT1G47600.1 48.198 444 173 8 33 430 60 492 2.12e-133 410
Msa0549140 AT1G47600.2 51.775 479 203 10 445 908 44 509 2.41e-158 474
Msa0549140 AT1G47600.2 48.198 444 172 8 33 430 60 491 3.93e-133 409
Msa0549140 AT3G60120.1 51.143 481 213 10 445 907 13 489 2.43e-158 476
Msa0549140 AT3G60120.1 45.578 441 187 6 39 430 36 472 3.90e-127 395
Msa0549140 AT2G44460.1 48.893 497 238 7 434 915 17 512 2.58e-157 474
Msa0549140 AT2G44460.1 48.307 443 182 5 39 435 51 492 2.25e-134 415
Msa0549140 AT2G44470.3 47.035 489 242 7 436 908 19 506 1.42e-155 470
Msa0549140 AT2G44470.3 45.023 442 195 4 39 433 51 491 9.87e-134 414
Msa0549140 AT2G44490.1 48.577 492 235 8 438 912 7 497 1.03e-153 464
Msa0549140 AT2G44490.1 47.045 440 185 5 39 430 36 475 6.23e-131 405
Msa0549140 AT3G18080.1 49.281 487 224 10 441 912 34 512 1.82e-153 462
Msa0549140 AT3G18080.1 45.946 444 186 9 33 429 54 490 7.48e-124 385
Msa0549140 AT5G54570.1 48.454 485 220 7 445 907 29 505 1.03e-152 461
Msa0549140 AT5G54570.1 45.701 442 185 5 39 430 52 488 1.99e-127 395
Msa0549140 AT3G18070.3 47.967 492 223 12 437 912 21 495 4.09e-149 450
Msa0549140 AT3G18070.3 43.946 446 186 11 33 430 45 474 3.55e-118 370
Msa0549140 AT3G18070.1 48.171 492 228 12 437 912 21 501 3.02e-148 448
Msa0549140 AT3G18070.1 44.170 446 191 11 33 430 45 480 1.73e-117 368
Msa0549140 AT3G60130.2 53.382 414 173 6 509 907 40 448 7.09e-148 446
Msa0549140 AT3G60130.2 49.622 397 150 5 79 430 40 431 3.22e-131 402
Msa0549140 AT2G44480.2 51.100 409 191 3 511 911 3 410 1.71e-146 440
Msa0549140 AT2G44480.2 48.878 401 160 3 85 441 1 400 1.90e-133 406
Msa0549140 AT5G25980.2 48.975 488 226 11 442 912 46 527 2.45e-144 439
Msa0549140 AT5G25980.2 46.296 432 184 6 45 430 75 504 1.42e-124 388
Msa0549140 AT3G09260.1 48.017 479 231 9 446 908 35 511 7.81e-143 435
Msa0549140 AT3G09260.1 44.270 445 200 5 33 430 50 493 3.95e-121 378
Msa0549140 AT5G36890.2 48.542 480 221 7 447 912 17 484 8.66e-142 431
Msa0549140 AT5G36890.2 44.880 459 192 8 18 430 19 462 2.05e-118 370
Msa0549140 AT5G36890.1 48.542 480 221 7 447 912 17 484 8.87e-142 431
Msa0549140 AT5G36890.1 44.880 459 192 8 18 430 19 462 2.26e-118 370
Msa0549140 AT3G60130.3 52.415 414 166 7 509 907 40 437 6.99e-141 427
Msa0549140 AT3G60130.3 48.615 397 143 6 79 430 40 420 2.81e-124 384
Msa0549140 AT2G32860.2 44.906 481 249 7 445 909 93 573 4.92e-140 431
Msa0549140 AT2G32860.2 40.625 448 219 3 39 439 116 563 2.97e-115 366
Msa0549140 AT2G32860.1 44.906 481 248 7 445 909 93 572 6.04e-140 431
Msa0549140 AT2G32860.1 40.625 448 218 4 39 439 116 562 1.24e-115 367
Msa0549140 AT3G03640.1 45.233 493 251 8 445 918 33 525 4.68e-139 425
Msa0549140 AT3G03640.1 43.379 438 200 3 39 428 56 493 5.12e-118 370
Msa0549140 AT1G75940.1 46.531 490 235 11 446 912 37 522 1.44e-137 422
Msa0549140 AT1G75940.1 44.615 455 189 10 33 430 52 500 1.30e-118 372
Msa0549140 AT5G24540.2 51.415 424 189 7 446 853 32 454 1.05e-136 416
Msa0549140 AT5G24540.2 47.264 402 164 5 39 393 54 454 9.42e-120 372
Msa0549140 AT5G26000.1 47.433 487 228 11 442 908 34 512 3.20e-136 418
Msa0549140 AT5G26000.1 42.369 498 212 12 3 430 1 493 8.76e-118 370
Msa0549140 AT3G21370.1 45.436 482 242 10 445 907 32 511 1.38e-135 416
Msa0549140 AT3G21370.1 43.080 448 204 8 33 430 48 494 5.01e-116 365
Msa0549140 AT5G28510.1 45.621 491 244 10 440 909 33 521 6.48e-135 414
Msa0549140 AT5G28510.1 42.889 450 204 6 33 430 54 502 9.43e-114 359
Msa0549140 AT1G52400.3 45.756 483 239 12 445 908 38 516 7.35e-133 409
Msa0549140 AT1G52400.3 43.274 446 204 8 33 430 54 498 9.08e-113 357
Msa0549140 AT1G52400.1 45.756 483 239 12 445 908 38 516 7.35e-133 409
Msa0549140 AT1G52400.1 43.274 446 204 8 33 430 54 498 9.08e-113 357
Msa0549140 AT1G66280.1 46.653 478 236 10 446 907 36 510 1.12e-132 409
Msa0549140 AT1G66280.1 44.270 445 199 7 33 430 51 493 2.09e-114 361
Msa0549140 AT2G44470.1 45.497 433 220 6 436 853 19 450 4.53e-132 404
Msa0549140 AT2G44470.1 44.527 402 176 3 39 394 51 451 1.20e-118 369
Msa0549140 AT1G61820.1 46.122 490 243 11 438 910 22 507 1.71e-131 405
Msa0549140 AT1G61820.1 42.334 437 203 6 39 428 52 486 1.05e-105 337
Msa0549140 AT1G66270.1 45.625 480 242 10 446 909 36 512 5.32e-131 404
Msa0549140 AT1G66270.1 43.146 445 204 7 33 430 51 493 8.45e-112 354
Msa0549140 AT5G54570.3 47.332 431 198 6 445 854 29 451 4.21e-130 399
Msa0549140 AT5G54570.3 44.554 404 170 4 39 393 52 450 4.68e-111 349
Msa0549140 AT1G02850.2 46.105 475 226 10 447 907 27 485 5.77e-129 398
Msa0549140 AT1G02850.2 43.946 446 183 9 33 430 41 467 7.41e-110 348
Msa0549140 AT1G66270.2 45.417 480 241 11 446 909 36 510 5.14e-128 396
Msa0549140 AT1G66270.2 42.921 445 203 8 33 430 51 491 7.16e-109 346
Msa0549140 AT3G60140.2 48.711 388 183 6 446 818 26 412 1.72e-127 392
Msa0549140 AT3G60140.2 43.989 366 158 3 39 358 48 412 1.88e-106 337
Msa0549140 AT1G02850.5 44.177 498 225 11 447 907 27 508 1.24e-124 387
Msa0549140 AT1G02850.5 56.796 206 84 2 39 244 48 248 1.28e-71 246
Msa0549140 AT1G02850.5 39.024 205 105 5 232 430 300 490 3.11e-30 126
Msa0549140 AT5G25980.3 48.364 428 200 9 442 854 46 467 5.65e-124 384
Msa0549140 AT5G25980.3 45.431 394 168 5 45 393 75 466 4.22e-110 347
Msa0549140 AT5G25980.1 48.364 428 200 9 442 854 46 467 5.65e-124 384
Msa0549140 AT5G25980.1 45.431 394 168 5 45 393 75 466 4.22e-110 347
Msa0549140 AT5G54570.2 47.101 414 194 6 511 907 3 408 3.58e-123 380
Msa0549140 AT5G54570.2 44.949 396 163 5 85 430 1 391 6.01e-109 343
Msa0549140 AT1G02850.4 44.289 499 224 12 447 907 27 509 3.85e-123 384
Msa0549140 AT1G02850.4 56.796 206 84 2 39 244 48 248 1.31e-71 246
Msa0549140 AT1G02850.4 38.835 206 105 6 232 430 300 491 1.05e-28 122
Msa0549140 AT4G21760.2 44.703 472 237 9 451 907 59 521 4.36e-123 384
Msa0549140 AT4G21760.2 41.535 443 197 8 39 431 76 506 1.16e-102 330
Msa0549140 AT2G44450.2 50.986 355 161 4 562 908 1 350 2.18e-121 373
Msa0549140 AT2G44450.2 48.961 337 123 4 138 430 1 332 4.00e-106 333
Msa0549140 AT1G02850.1 45.532 470 209 11 447 907 27 458 8.59e-121 375
Msa0549140 AT1G02850.1 46.778 419 183 9 33 430 41 440 4.55e-114 358
Msa0549140 AT1G60090.2 42.449 490 243 13 446 918 24 491 1.88e-120 376
Msa0549140 AT1G60090.2 40.138 436 200 7 39 430 46 464 5.92e-97 314
Msa0549140 AT4G27830.1 41.344 491 256 9 445 919 22 496 2.44e-119 373
Msa0549140 AT4G27830.1 40.271 442 202 7 39 434 45 470 5.06e-101 325
Msa0549140 AT1G61810.1 44.033 486 250 11 451 918 38 519 4.46e-119 373
Msa0549140 AT1G61810.1 40.367 436 211 6 39 427 55 488 2.66e-97 315
Msa0549140 AT2G44480.4 57.372 312 118 5 445 743 65 374 1.09e-117 365
Msa0549140 AT2G44480.4 53.979 289 90 3 39 286 88 374 1.92e-101 322
Msa0549140 AT5G26000.2 46.636 431 204 9 442 854 34 456 7.25e-117 365
Msa0549140 AT5G26000.2 44.221 398 168 6 45 393 63 455 7.52e-103 328
Msa0549140 AT1G60090.1 41.200 500 242 14 446 918 24 498 1.63e-116 366
Msa0549140 AT1G60090.1 39.367 442 202 9 39 430 46 471 1.06e-92 303
Msa0549140 AT4G21760.1 43.644 472 232 10 451 907 59 511 3.31e-116 366
Msa0549140 AT4G21760.1 40.271 442 194 8 39 431 76 496 1.68e-96 314
Msa0549140 AT4G22100.1 42.739 482 241 12 447 911 23 486 7.66e-116 364
Msa0549140 AT4G22100.1 40.138 436 202 9 39 430 44 464 2.00e-93 305
Msa0549140 AT1G61810.3 44.902 461 233 10 451 894 38 494 4.68e-115 363
Msa0549140 AT1G61810.3 40.367 436 211 6 39 427 55 488 1.76e-97 317
Msa0549140 AT4G27820.1 42.292 480 241 10 445 907 22 482 1.94e-114 360
Msa0549140 AT4G27820.1 39.456 441 205 8 39 434 45 468 4.26e-94 306
Msa0549140 AT2G44470.2 45.119 379 192 6 436 799 19 396 2.38e-112 351
Msa0549140 AT2G44470.2 43.228 347 150 3 39 339 51 396 1.11e-97 312
Msa0549140 AT3G62750.1 40.326 491 248 11 435 908 12 474 8.85e-112 353
Msa0549140 AT3G62750.1 38.914 442 197 8 39 434 45 459 6.14e-92 300
Msa0549140 AT3G62750.2 40.326 491 248 11 435 908 38 500 2.70e-111 352
Msa0549140 AT3G62750.2 38.914 442 197 8 39 434 71 485 1.52e-91 300
Msa0549140 AT1G45191.4 42.259 478 235 12 447 907 30 483 1.04e-110 350
Msa0549140 AT1G45191.4 38.799 433 206 7 39 430 51 465 9.40e-88 290
Msa0549140 AT1G52400.2 44.601 426 214 11 446 853 39 460 1.56e-108 343
Msa0549140 AT1G52400.2 42.157 408 188 7 33 393 54 460 6.44e-97 312
Msa0549140 AT1G45191.6 40.956 481 248 12 447 907 30 494 4.18e-107 341
Msa0549140 AT1G45191.6 38.356 438 212 7 39 430 51 476 1.45e-85 284
Msa0549140 AT1G45191.2 41.116 484 238 14 447 907 30 489 7.52e-107 340
Msa0549140 AT1G45191.2 38.182 440 205 9 39 430 51 471 1.03e-85 284
Msa0549140 AT3G62740.1 39.184 490 260 13 435 908 12 479 9.82e-106 337
Msa0549140 AT3G62740.1 37.585 439 212 9 39 434 45 464 1.68e-84 281
Msa0549140 AT1G45191.1 40.530 491 248 13 447 907 30 506 1.23e-105 338
Msa0549140 AT1G45191.1 37.946 448 212 8 39 430 51 488 3.78e-84 280
Msa0549140 AT1G02850.3 45.343 408 177 9 447 818 27 424 9.72e-105 332
Msa0549140 AT1G02850.3 56.796 206 84 2 39 244 48 248 1.86e-72 246
Msa0549140 AT1G02850.3 42.105 133 63 4 232 358 300 424 2.20e-17 86.3
Msa0549140 AT2G44460.2 47.541 366 182 5 560 915 1 366 1.17e-102 327
Msa0549140 AT2G44460.2 45.906 342 139 4 136 431 1 342 1.66e-87 286
Msa0549140 AT3G18070.4 49.701 334 148 8 437 757 21 347 2.15e-102 324
Msa0549140 AT3G18070.4 44.516 310 123 7 33 300 45 347 7.06e-79 261
Msa0549140 AT5G48375.1 44.072 447 165 12 442 872 34 411 2.32e-102 326
Msa0549140 AT5G48375.1 42.788 416 132 10 45 412 54 411 1.65e-90 295
Msa0549140 AT1G51490.1 48.563 348 157 8 453 788 27 364 2.59e-98 314
Msa0549140 AT1G51490.1 43.582 335 139 8 33 325 35 361 1.23e-80 267
Msa0549140 AT1G61810.5 42.381 420 225 10 512 918 4 419 4.09e-96 309
Msa0549140 AT1G61810.5 39.487 390 187 6 85 427 1 388 5.17e-82 271
Msa0549140 AT1G60270.1 46.221 344 161 8 446 773 24 359 9.92e-96 306
Msa0549140 AT1G60270.1 43.813 299 120 4 39 296 46 337 1.72e-76 255
Msa0549140 AT3G62750.4 39.726 438 220 10 435 856 38 447 1.32e-94 306
Msa0549140 AT3G62750.4 38.614 404 175 8 39 396 71 447 4.51e-78 262
Msa0549140 AT4G27830.2 39.762 420 228 7 511 919 3 408 2.51e-93 301
Msa0549140 AT4G27830.2 38.889 396 182 6 85 434 1 382 1.97e-83 275
Msa0549140 AT1G61810.4 43.590 390 200 9 446 818 33 419 5.30e-92 298
Msa0549140 AT1G61810.4 38.965 367 175 6 39 358 55 419 1.64e-75 254
Msa0549140 AT3G62740.2 39.401 434 226 12 435 853 12 423 1.16e-91 297
Msa0549140 AT3G62740.2 40.496 363 160 8 39 358 45 394 1.13e-74 251
Msa0549140 AT3G18070.2 46.291 337 164 8 587 912 94 424 1.09e-89 292
Msa0549140 AT3G18070.2 41.587 315 132 7 163 430 94 403 5.04e-71 241
Msa0549140 AT3G18070.2 55.556 72 31 1 437 508 21 91 2.76e-18 89.0
Msa0549140 AT1G45191.5 46.429 336 155 8 447 766 30 356 1.22e-89 291
Msa0549140 AT1G45191.5 43.137 306 122 5 39 300 51 348 1.59e-72 245
Msa0549140 AT1G45191.3 46.429 336 155 8 447 766 30 356 1.41e-89 291
Msa0549140 AT1G45191.3 43.137 306 122 5 39 300 51 348 1.77e-72 245
Msa0549140 AT4G27820.2 40.238 420 225 8 512 919 4 409 9.87e-89 289
Msa0549140 AT4G27820.2 37.722 395 189 7 85 434 1 383 7.88e-77 257
Msa0549140 AT4G27820.3 40.238 420 225 8 512 919 4 409 9.87e-89 289
Msa0549140 AT4G27820.3 37.722 395 189 7 85 434 1 383 7.88e-77 257
Msa0549140 AT1G61820.3 44.022 368 191 8 555 910 4 368 2.13e-88 287
Msa0549140 AT1G61820.3 39.420 345 161 5 131 428 4 347 1.96e-70 238
Msa0549140 AT3G62750.7 43.844 333 158 7 435 754 12 328 2.20e-87 284
Msa0549140 AT3G62750.7 41.456 316 124 5 39 309 45 344 1.10e-72 244
Msa0549140 AT3G62750.8 43.844 333 158 7 435 754 12 328 2.20e-87 284
Msa0549140 AT3G62750.8 41.456 316 124 5 39 309 45 344 1.10e-72 244
Msa0549140 AT2G44480.5 46.358 302 153 3 618 911 6 306 2.30e-87 281
Msa0549140 AT2G44480.5 43.151 292 121 3 194 441 6 296 1.45e-73 244
Msa0549140 AT3G62750.3 43.844 333 158 7 435 754 38 354 1.49e-86 284
Msa0549140 AT3G62750.3 41.456 316 124 5 39 309 71 370 4.91e-72 244
Msa0549140 AT3G62750.6 38.049 410 219 9 511 908 3 389 4.55e-83 274
Msa0549140 AT3G62750.6 36.869 396 182 7 85 434 1 374 2.32e-73 248
Msa0549140 AT3G62750.5 38.049 410 219 9 511 908 3 389 4.55e-83 274
Msa0549140 AT3G62750.5 36.869 396 182 7 85 434 1 374 2.32e-73 248
Msa0549140 AT3G18070.7 45.912 318 155 8 606 912 1 312 7.05e-83 270
Msa0549140 AT3G18070.7 40.878 296 123 7 182 430 1 291 3.28e-64 219
Msa0549140 AT1G61810.2 50.000 264 120 4 446 699 33 294 1.43e-75 250
Msa0549140 AT1G61810.2 51.456 206 98 2 39 244 55 258 8.01e-63 215
Msa0549140 AT1G60270.2 45.255 274 135 6 511 773 3 272 2.53e-70 235
Msa0549140 AT1G60270.2 43.083 253 100 3 85 296 1 250 8.06e-61 209
Msa0549140 AT3G18070.5 43.443 244 126 5 587 820 94 335 4.99e-57 200
Msa0549140 AT3G18070.5 39.344 244 100 5 163 360 94 335 1.79e-47 173
Msa0549140 AT3G18070.5 55.556 72 31 1 437 508 21 91 1.31e-18 89.0
Msa0549140 AT3G18070.6 42.857 224 116 5 606 819 1 222 1.06e-50 178
Msa0549140 AT3G18070.6 38.393 224 90 5 182 359 1 222 4.03e-41 151
Msa0549140 AT5G16580.1 34.783 322 173 9 556 864 2 299 1.08e-39 149
Msa0549140 AT5G16580.1 31.132 318 154 7 132 404 2 299 1.13e-31 126
Msa0549140 AT3G06510.1 26.757 370 210 13 80 427 159 489 6.53e-28 120
Msa0549140 AT3G06510.1 26.316 418 217 16 511 909 166 511 5.25e-26 114
Msa0549140 AT3G06510.2 26.425 386 225 14 80 427 159 523 9.97e-28 120
Msa0549140 AT3G06510.2 25.986 431 236 16 511 909 166 545 7.76e-27 117

Find 165 sgRNAs with CRISPR-Local

Find 770 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATTTATATTACTGAAAA+TGG 0.152248 4_1:-43962347 Msa0549140:intron
TTCCCAGAAGGCTTCATATT+TGG 0.197275 4_1:-43963929 Msa0549140:CDS
CTTGTTTAATTATAGGTTTA+TGG 0.235433 4_1:-43972257 Msa0549140:intron
CACCAGGTCGATGTTCTTCT+TGG 0.235520 4_1:-43972689 Msa0549140:CDS
CACCAGGTCGATGCTCTTCT+TGG 0.247168 4_1:-43963211 Msa0549140:CDS
TTTGTTTAATTATAGGTTTA+TGG 0.249802 4_1:-43962884 Msa0549140:intron
AATTGCACCGGTGGTGATTC+TGG 0.263758 4_1:-43963179 Msa0549140:CDS
AATTGCACCGGTGGTGATTC+TGG 0.263758 4_1:-43972657 Msa0549140:CDS
GAATCACCACCGGTGCAATT+TGG 0.269114 4_1:+43963182 None:intergenic
GAATCACCACCGGTGCAATT+TGG 0.269114 4_1:+43972660 None:intergenic
AATCATGAAGGATATGAATT+TGG 0.270686 4_1:-43973328 Msa0549140:CDS
TGATAATGTGCAACTAAATA+TGG 0.279620 4_1:+43963149 None:intergenic
GTGGAAGAGGACCAAGTATA+TGG 0.292452 4_1:-43963862 Msa0549140:CDS
GTGGAAGAGGACCAAGTATA+TGG 0.292452 4_1:-43973446 Msa0549140:CDS
GAACTTTGCTTCAAAACATT+TGG 0.292593 4_1:-43963311 Msa0549140:CDS
ATCACTTGAGGAATCACTTA+TGG 0.300312 4_1:-43962145 Msa0549140:CDS
ACTTTCAGGTTGCTTCAAAT+TGG 0.301411 4_1:-43962436 Msa0549140:intron
CAATAACCTCATTGATGAAT+TGG 0.307366 4_1:-43973124 Msa0549140:CDS
TGATAGTGTGCAGTTAAATA+AGG 0.310074 4_1:+43972627 None:intergenic
GAACTTTGCTTTAAAACATT+TGG 0.321295 4_1:-43972789 Msa0549140:CDS
AGTGGTTCATTTGATTTCAT+TGG 0.342580 4_1:-43962769 Msa0549140:CDS
AAGACAACAATAGAGAAAAT+AGG 0.342774 4_1:+43973625 None:intergenic
AAGGGTTATACTGTGAGATT+TGG 0.344341 4_1:-43961908 Msa0549140:CDS
ATATATTATCTATATGTAAT+TGG 0.344365 4_1:-43961662 Msa0549140:three_prime_UTR
AGGGGTTATACTGTGAGATT+TGG 0.352676 4_1:-43971337 Msa0549140:CDS
GTGCCAAATATGAAGCCTTC+TGG 0.353921 4_1:+43963926 None:intergenic
TTTCAGTAATATAAATTAAA+GGG 0.356229 4_1:+43962351 None:intergenic
AACACTGCACCATTGCAAAT+AGG 0.356617 4_1:-43963971 Msa0549140:CDS
AACACTGCACCATTGCAAAT+AGG 0.356617 4_1:-43973555 Msa0549140:intron
CAACTGCAGAAAAGACTTCC+AGG 0.368813 4_1:-43963342 Msa0549140:intron
AGATAACAAACTTGATATAA+AGG 0.370220 4_1:-43963018 Msa0549140:CDS
CCTCCACTTAGTTTCCCATC+TGG 0.378131 4_1:+43963683 None:intergenic
AAACTTACATTTAGACCAAT+TGG 0.381135 4_1:+43971909 None:intergenic
CAAACTCTAGAAGATGAATA+TGG 0.381482 4_1:-43963473 Msa0549140:CDS
CCATGGAGTTACAGTCAAAA+TGG 0.382192 4_1:-43972732 Msa0549140:CDS
CTCCACTTAGTTTCCCATCT+GGG 0.388126 4_1:+43963684 None:intergenic
TGCCAAATATGAAGCCTTCT+GGG 0.396330 4_1:+43963927 None:intergenic
TATTCATCTTCTAGAGTTTG+AGG 0.401353 4_1:+43963476 None:intergenic
CAATCTCTAGAAGATGAATA+TGG 0.407604 4_1:-43972951 Msa0549140:CDS
TTAATTTATATTACTGAAAA+CGG 0.407743 4_1:-43971708 Msa0549140:intron
TGATTCATATCATCGATATA+AGG 0.409189 4_1:-43963777 Msa0549140:CDS
TATCTCATGCTTAATGTCAT+AGG 0.409360 4_1:+43973651 None:intergenic
GTCTCTCAAAAGGGTGTGAT+AGG 0.412344 4_1:-43963077 Msa0549140:CDS
GATTGCTCTTTAGTAAACTT+TGG 0.424137 4_1:+43972175 None:intergenic
CAAATATCAAGTCTCTCAAA+AGG 0.425107 4_1:-43963087 Msa0549140:CDS
TGGTAACCTTGTTCTTACTA+AGG 0.438507 4_1:+43962822 None:intergenic
AGAAAGTCTCGAATTGCTCT+TGG 0.442143 4_1:+43962401 None:intergenic
TTATAGGTTTATGGATCCCT+TGG 0.446664 4_1:-43962875 Msa0549140:intron
TTATAGGTTTATGGATCCCT+TGG 0.446664 4_1:-43972248 Msa0549140:intron
TGACTCGTATCATCGATATA+AGG 0.447189 4_1:-43973361 Msa0549140:CDS
CAGGGCTGGTGTAAATGTAA+AGG 0.460153 4_1:-43961972 Msa0549140:CDS
CAGAGAATCTGTTAGGTAGC+TGG 0.461134 4_1:+43972060 None:intergenic
CAACAACCTCATCAATGAAC+TGG 0.462573 4_1:-43963633 Msa0549140:CDS
AGTGAATCTGTTAGGTAGCT+AGG 0.464690 4_1:+43962688 None:intergenic
TATTCATCTTCTAGAGATTG+AGG 0.466417 4_1:+43972954 None:intergenic
AAAAGATATCAAAAGCTCTC+AGG 0.470702 4_1:-43961854 Msa0549140:CDS
TATTTACATACAATTTCAAA+TGG 0.472751 4_1:+43961684 None:intergenic
GCACGAGATGGAAAACCAAT+TGG 0.474977 4_1:-43971924 Msa0549140:CDS
GGTTTGCCATTGCTTAATTG+AGG 0.479254 4_1:+43962709 None:intergenic
AACGAGAAAGTGAATCTGTT+AGG 0.479548 4_1:+43962680 None:intergenic
AGGGCTGGTGTAAATGTAAA+GGG 0.484456 4_1:-43961971 Msa0549140:CDS
GAATTTGCATTGCTTAATTG+AGG 0.486109 4_1:+43972082 None:intergenic
AGCAAAGTTCTGCATAATCC+TGG 0.487489 4_1:+43963324 None:intergenic
GCAGCAAGTGAAGGTGGAAG+AGG 0.487766 4_1:-43963875 Msa0549140:CDS
GCAGCAAGTGAAGGTGGAAG+AGG 0.487766 4_1:-43973459 Msa0549140:CDS
AACTAGACAGAGAATCTGTT+AGG 0.488098 4_1:+43972053 None:intergenic
ATACTTTGCATGGTCTCTGT+TGG 0.489827 4_1:-43971377 Msa0549140:CDS
ATCAATGAACTGGTGGCAAA+TGG 0.490203 4_1:-43963623 Msa0549140:intron
GAGTATTCTAGACCAAGATA+TGG 0.491540 4_1:+43963706 None:intergenic
AACACTTACATTTAGACCAA+TGG 0.493905 4_1:+43962535 None:intergenic
GAGTATTCTAGACCAAGATA+TGG 0.494023 4_1:+43973290 None:intergenic
TCATTTATTCTATCTTAATG+AGG 0.494555 4_1:-43962094 Msa0549140:CDS
CAGGGCTGGTGTAAATGTAA+AGG 0.496998 4_1:-43971401 Msa0549140:CDS
TGGGTATGCAAATGGTGAAA+TGG 0.498834 4_1:-43963234 Msa0549140:CDS
AATTTCAGGTTGCTTCAGAA+TGG 0.500231 4_1:-43971797 Msa0549140:intron
AATAGAAATGATTTCCCAGA+AGG 0.502580 4_1:-43963941 Msa0549140:CDS
AGTCAAAATGGATATGCAAA+TGG 0.504705 4_1:-43972720 Msa0549140:CDS
AGTTTACAAAAGAGCAATCA+AGG 0.505341 4_1:-43962798 Msa0549140:CDS
ATGTGCAACTAAATATGGTT+CGG 0.507608 4_1:+43963154 None:intergenic
GTGTGCAGTTAAATAAGGTT+CGG 0.508262 4_1:+43972632 None:intergenic
CCATGGACATACAGTCAAGA+TGG 0.510839 4_1:-43963254 Msa0549140:CDS
CATCGATATAAGGAAGATGT+TGG 0.511755 4_1:-43973351 Msa0549140:CDS
AGGATAATCTCCATTGGCCA+AGG 0.513941 4_1:+43962858 None:intergenic
GTACGACGATCCATCATTAT+CGG 0.514862 4_1:-43971590 Msa0549140:CDS
AGGGCTGGTGTAAATGTAAA+GGG 0.516329 4_1:-43971400 Msa0549140:CDS
TGGATAATCTCCATTGGCCA+AGG 0.518626 4_1:+43972231 None:intergenic
GCAAATGGCGCAATGGCACC+AGG 0.525181 4_1:-43972705 Msa0549140:CDS
TTCAATGAACCTATTTGCAA+TGG 0.527927 4_1:+43963962 None:intergenic
TTCAATGAACCTATTTGCAA+TGG 0.527927 4_1:+43973546 None:intergenic
AGTCAAGATGGGTATGCAAA+TGG 0.528018 4_1:-43963242 Msa0549140:CDS
TTCATCATTACTTTAACAGA+AGG 0.528077 4_1:-43973591 Msa0549140:CDS
GATTCCTCAACCGATAATGA+TGG 0.529816 4_1:+43971580 None:intergenic
TGGAAGAGGACCAAGTATAT+GGG 0.531156 4_1:-43963861 Msa0549140:CDS
TGGAAGAGGACCAAGTATAT+GGG 0.531156 4_1:-43973445 Msa0549140:CDS
ATTGATGAATTGGTGGCAAA+TGG 0.539277 4_1:-43973114 Msa0549140:intron
TAACCTCATTGATGAATTGG+TGG 0.539436 4_1:-43973121 Msa0549140:CDS
TGATCTTACCAATGCTCGCA+TGG 0.539778 4_1:+43972204 None:intergenic
CGATCCATCATTATCGGTTG+AGG 0.542716 4_1:-43971584 Msa0549140:CDS
TTTATGGATCCCTTGGCCAA+TGG 0.549813 4_1:-43962868 Msa0549140:CDS
TTTATGGATCCCTTGGCCAA+TGG 0.549813 4_1:-43972241 Msa0549140:CDS
GATTCCTCAAGTGATAATGA+TGG 0.553887 4_1:+43962153 None:intergenic
GGATAACTTTGAACGAGCCA+TGG 0.555448 4_1:-43972749 Msa0549140:CDS
TTGGAGATAGAGTAAAACAT+TGG 0.559088 4_1:-43963292 Msa0549140:CDS
TTGGAGATAGAGTAAAACAT+TGG 0.559088 4_1:-43972770 Msa0549140:CDS
GTGATTGCAGTCGCACGAGA+TGG 0.559174 4_1:-43971936 Msa0549140:intron
TTATCACTTACATGATGAGA+GGG 0.559427 4_1:+43963438 None:intergenic
TATCCTCAAAAGATCAGTGA+TGG 0.559832 4_1:-43973405 Msa0549140:CDS
TCTTCTGCATATCAGTATGA+AGG 0.560527 4_1:-43963899 Msa0549140:CDS
TGGTCTAGAATACTCCCAGA+TGG 0.563550 4_1:-43963698 Msa0549140:CDS
TTGCCACCAGTTCATTGATG+AGG 0.564344 4_1:+43963627 None:intergenic
CCATCTTGACTGTATGTCCA+TGG 0.566884 4_1:+43963254 None:intergenic
AAATATCAAGTCTCTCAAAA+GGG 0.567104 4_1:-43963086 Msa0549140:CDS
ATCAAAAGCTCTCAGGATTG+TGG 0.567379 4_1:-43961847 Msa0549140:CDS
GTGAAAGTATCCCATATACT+TGG 0.569026 4_1:+43963851 None:intergenic
GTGAAAGTATCCCATATACT+TGG 0.569026 4_1:+43973435 None:intergenic
TTTATCACTTACATGATGAG+AGG 0.569696 4_1:+43963437 None:intergenic
CTCCCAGATGGGAAACTAAG+TGG 0.570318 4_1:-43963686 Msa0549140:CDS
TTGCCACCAATTCATCAATG+AGG 0.575333 4_1:+43973118 None:intergenic
GCAAATGGTGAAATGGCACC+AGG 0.576425 4_1:-43963227 Msa0549140:CDS
AAGATCAGTGATGGAAACAA+TGG 0.577375 4_1:-43973396 Msa0549140:CDS
GAGCAATCTAAGCAAGTCAA+AGG 0.581133 4_1:-43972160 Msa0549140:CDS
GGATAATCTCCATTGGCCAA+GGG 0.583402 4_1:+43972232 None:intergenic
TGGATATGCAAATGGCGCAA+TGG 0.586330 4_1:-43972712 Msa0549140:CDS
TCAAGTTTGTTATCTGAGAG+TGG 0.587930 4_1:+43963026 None:intergenic
TATCATGAAGGATATGAACT+TGG 0.589450 4_1:-43963744 Msa0549140:intron
GGAAGATGTTGGAATCATGA+AGG 0.590169 4_1:-43973340 Msa0549140:CDS
AACCAAGAAGAGCATCGACC+TGG 0.592148 4_1:+43963209 None:intergenic
TGGTTGAATCCAAATTGCAC+CGG 0.592901 4_1:-43963191 Msa0549140:CDS
TGGTTGAATCCAAATTGCAC+CGG 0.592901 4_1:-43972669 Msa0549140:CDS
AGTGGAGGAATTAATCAAGA+AGG 0.596031 4_1:-43963668 Msa0549140:CDS
AGTGGTGGAATTAATCAAGA+AGG 0.596031 4_1:-43973159 Msa0549140:CDS
GAAGGTGCAGCAAGTGAAGG+TGG 0.597164 4_1:-43963881 Msa0549140:CDS
GAAGGTGCAGCAAGTGAAGG+TGG 0.597164 4_1:-43973465 Msa0549140:intron
ACTTCTAGCTCATGCAGCAG+TGG 0.599488 4_1:-43963126 Msa0549140:intron
CTTTAAGATAAAAGAGATGA+CGG 0.600540 4_1:+43971524 None:intergenic
CATGGACATACAGTCAAGAT+GGG 0.602027 4_1:-43963253 Msa0549140:CDS
TATGAAGGTGCAGCAAGTGA+AGG 0.604375 4_1:-43963884 Msa0549140:CDS
TATGAAGGTGCAGCAAGTGA+AGG 0.604375 4_1:-43973468 Msa0549140:intron
GGTCTAGAATACTCCCAGAT+GGG 0.607544 4_1:-43963697 Msa0549140:CDS
GGATAATCTCCATTGGCCAA+GGG 0.607735 4_1:+43962859 None:intergenic
TGATCCATCATTATCACTTG+AGG 0.609826 4_1:-43962157 Msa0549140:CDS
GCAGAAGGAAAACTAAGTGG+TGG 0.613240 4_1:-43973174 Msa0549140:intron
GGATAACTTTGAATGAACCA+TGG 0.616263 4_1:-43963271 Msa0549140:CDS
GTGATTGCAGTTGAACGTGA+TGG 0.617225 4_1:-43962563 Msa0549140:intron
TTCGGTTCCAGAATCACCAC+CGG 0.620495 4_1:+43972650 None:intergenic
TGGTTGTATGTTTATCCAAG+AGG 0.620982 4_1:-43971777 Msa0549140:CDS
ATGTAAAGGGATACTTTGCA+TGG 0.626161 4_1:-43961958 Msa0549140:CDS
ATGTAAAGGGATACTTTGCA+TGG 0.626161 4_1:-43971387 Msa0549140:CDS
TTCGGTTCCAGAATCACCAC+CGG 0.630837 4_1:+43963172 None:intergenic
TATGCAGAAGGAAAACTAAG+TGG 0.632774 4_1:-43973177 Msa0549140:intron
CAACCTCATCAATGAACTGG+TGG 0.641935 4_1:-43963630 Msa0549140:CDS
GATGCACCTCAATTAAGCAA+TGG 0.645151 4_1:-43962715 Msa0549140:CDS
AAAATCAGTGATGGAAACAA+CGG 0.647021 4_1:-43963812 Msa0549140:CDS
TGTATCACTCACATGATGAG+AGG 0.655919 4_1:+43972915 None:intergenic
GGGTGTGATAGGTATAACAT+TGG 0.663042 4_1:-43963066 Msa0549140:CDS
TGAGAGCCTTAGTAAGAACA+AGG 0.667098 4_1:-43962828 Msa0549140:CDS
TTGAATCCAAATTGCACCGG+TGG 0.672179 4_1:-43963188 Msa0549140:CDS
TTGAATCCAAATTGCACCGG+TGG 0.672179 4_1:-43972666 Msa0549140:CDS
AACCAAGAAGAACATCGACC+TGG 0.677559 4_1:+43972687 None:intergenic
GAGCAATCAAGGCTAGTCAG+TGG 0.679451 4_1:-43962787 Msa0549140:CDS
ACTCTAGAAGATGAATATGG+CGG 0.692578 4_1:-43963470 Msa0549140:CDS
CCAGATGGGAAACTAAGTGG+AGG 0.696893 4_1:-43963683 Msa0549140:CDS
TCTCTAGAAGATGAATATGG+CGG 0.701636 4_1:-43972948 Msa0549140:CDS
TGGAAACAATGGAGACGTTG+CGG 0.708998 4_1:-43973385 Msa0549140:CDS
AAAAGACTTTCAAAACTACG+CGG 0.803991 4_1:-43972811 Msa0549140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAATAAAAAATA+TGG + chr4_1:43962105-43962124 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr4_1:43968239-43968258 Msa0549140:intron 0.0%
!! TATATATATATATATATATA+GGG - chr4_1:43968238-43968257 Msa0549140:intron 0.0%
!! ATATTATAAATTTAAATTAA+TGG - chr4_1:43972703-43972722 Msa0549140:CDS 0.0%
!! AAAAAAATAAAAAATATGGT+TGG + chr4_1:43962101-43962120 None:intergenic 10.0%
!! AGTATTATAAATTTAAATGA+TGG - chr4_1:43963332-43963351 Msa0549140:CDS 10.0%
!!! TTTTCAGTAATATAAATTAA+TGG + chr4_1:43963599-43963618 None:intergenic 10.0%
!! TTAATTTATATTACTGAAAA+CGG - chr4_1:43963599-43963618 Msa0549140:intron 10.0%
!!! AATTTAGAATAATATACTTT+AGG + chr4_1:43964433-43964452 None:intergenic 10.0%
!!! TTTTAATTCTATTTGATTTA+TGG - chr4_1:43966384-43966403 Msa0549140:intron 10.0%
!!! CTTATTAAATTATCTTTTTT+TGG - chr4_1:43968108-43968127 Msa0549140:intron 10.0%
!! ATATAAAAAACATTAGAATA+GGG + chr4_1:43970082-43970101 None:intergenic 10.0%
!! TATATAAAAAACATTAGAAT+AGG + chr4_1:43970083-43970102 None:intergenic 10.0%
!!! ATTAACATAAACATTTTAAA+AGG - chr4_1:43970149-43970168 Msa0549140:intron 10.0%
!!! CAATGTAATTAATAAATTTT+CGG + chr4_1:43970747-43970766 None:intergenic 10.0%
!! AAATTTGTAATTAATGAATT+TGG - chr4_1:43972841-43972860 Msa0549140:intron 10.0%
!! TTTCAGTAATATAAATTAAA+GGG + chr4_1:43972959-43972978 None:intergenic 10.0%
!!! TTTTCAGTAATATAAATTAA+AGG + chr4_1:43963599-43963618 None:intergenic 10.0%
!! TTAATTTATATTACTGAAAA+TGG - chr4_1:43963599-43963618 Msa0549140:intron 10.0%
!! ATATATTATCTATATGTAAT+TGG - chr4_1:43973645-43973664 Msa0549140:CDS 10.0%
!!! TTTTTTATAATTTATGCAGA+AGG - chr4_1:43962118-43962137 Msa0549140:CDS 15.0%
!!! TTATATGTGTATTTAATTTC+AGG - chr4_1:43963496-43963515 Msa0549140:CDS 15.0%
!! TTCATTGTTTAAATATAAGA+AGG - chr4_1:43964175-43964194 Msa0549140:intron 15.0%
!!! ACTTATATTTAGTTTAATAG+TGG + chr4_1:43964515-43964534 None:intergenic 15.0%
!! TCATAAAAAGGATTAATTTA+AGG - chr4_1:43966468-43966487 Msa0549140:intron 15.0%
!! CATAAAAAGGATTAATTTAA+GGG - chr4_1:43966469-43966488 Msa0549140:intron 15.0%
!! GAATAAAAATTAAAATTCAC+AGG + chr4_1:43966603-43966622 None:intergenic 15.0%
!! AAACTTTATCTCAAATTAAA+GGG + chr4_1:43966667-43966686 None:intergenic 15.0%
!! AAAAAAAAAAAAAGATGGAT+CGG - chr4_1:43967052-43967071 Msa0549140:intron 15.0%
!! ATTAATGAAAATTGATGAAA+TGG - chr4_1:43967089-43967108 Msa0549140:intron 15.0%
!! TAAAAAGAATATTGTTATGA+GGG + chr4_1:43967413-43967432 None:intergenic 15.0%
!! ATAAAAAGAATATTGTTATG+AGG + chr4_1:43967414-43967433 None:intergenic 15.0%
!! ATGAAAAATAAACAAATTAG+TGG + chr4_1:43967521-43967540 None:intergenic 15.0%
!! CATTAGTAATATTAATATCA+GGG + chr4_1:43967647-43967666 None:intergenic 15.0%
!! ACATTAGTAATATTAATATC+AGG + chr4_1:43967648-43967667 None:intergenic 15.0%
!! ATAATATAGTAAGTAAAAGT+AGG + chr4_1:43967818-43967837 None:intergenic 15.0%
!!! TACTTACTATATTATTTTGA+TGG - chr4_1:43967823-43967842 Msa0549140:intron 15.0%
!!! ACTTACTATATTATTTTGAT+GGG - chr4_1:43967824-43967843 Msa0549140:intron 15.0%
!! AAAAAGACAAAATAAATTGA+AGG + chr4_1:43968563-43968582 None:intergenic 15.0%
!!! TGAAATAAATTTGAAATTCA+AGG + chr4_1:43968599-43968618 None:intergenic 15.0%
!! AATAAAACATCTCTTATTAT+TGG + chr4_1:43968671-43968690 None:intergenic 15.0%
!! AAATAGCAAAATAATGAAAA+AGG + chr4_1:43968852-43968871 None:intergenic 15.0%
!!! TGAGATTTTTTTTTTTTTTG+AGG - chr4_1:43970303-43970322 Msa0549140:intron 15.0%
!!! GAGATTTTTTTTTTTTTTGA+GGG - chr4_1:43970304-43970323 Msa0549140:intron 15.0%
!!! AAATGAGATTTTTTTTTTGA+GGG - chr4_1:43970330-43970349 Msa0549140:intron 15.0%
!! TATCATTCTATTTATATGTT+TGG + chr4_1:43970411-43970430 None:intergenic 15.0%
!!! ATTGTATTTAGAACATAAAA+TGG + chr4_1:43970719-43970738 None:intergenic 15.0%
!! CGAAAATTTATTAATTACAT+TGG - chr4_1:43970745-43970764 Msa0549140:intron 15.0%
!! TTGACTAGAAAAATAAATAA+AGG - chr4_1:43971004-43971023 Msa0549140:intron 15.0%
!! ATCATATATTTGTGTTAATT+TGG + chr4_1:43972388-43972407 None:intergenic 15.0%
!! TTTGTTTAATTATAGGTTTA+TGG - chr4_1:43972423-43972442 Msa0549140:intron 15.0%
!!! TTTCTTTTAATCTAAATACA+GGG - chr4_1:43973317-43973336 Msa0549140:CDS 15.0%
!! TATTTACATACAATTTCAAA+TGG + chr4_1:43973626-43973645 None:intergenic 15.0%
!! TTTAATTGAGAATAGTCAAT+TGG + chr4_1:43962063-43962082 None:intergenic 20.0%
!!! GCAATTTTTTTTACATAAGA+CGG + chr4_1:43962293-43962312 None:intergenic 20.0%
!! TCTTATGTAAAAAAAATTGC+AGG - chr4_1:43962293-43962312 Msa0549140:intron 20.0%
!!! ATTTGTAACTCTTTTTCATT+GGG - chr4_1:43962325-43962344 Msa0549140:intron 20.0%
!! TAGATATGATTGTGTTAATT+TGG + chr4_1:43962974-43962993 None:intergenic 20.0%
!!! TCCATTTCTTGTTTAATTAT+AGG - chr4_1:43963043-43963062 Msa0549140:CDS 20.0%
!! ACCTATAATTAAACAAGAAA+TGG + chr4_1:43963047-43963066 None:intergenic 20.0%
!! CTTGTTTAATTATAGGTTTA+TGG - chr4_1:43963050-43963069 Msa0549140:CDS 20.0%
!!! AAAGGTTCATTTGATTTTAT+TGG - chr4_1:43963165-43963184 Msa0549140:CDS 20.0%
!!! TAATTCAAATTTTCATGTGT+AGG - chr4_1:43963685-43963704 Msa0549140:CDS 20.0%
!!! ATTTTCATAGATTACAAAGA+TGG - chr4_1:43963997-43964016 Msa0549140:intron 20.0%
!! TGATTACAAAAAATCTACTA+GGG - chr4_1:43964332-43964351 Msa0549140:intron 20.0%
!!! AATATGGTTTATACCTTTTA+AGG - chr4_1:43964396-43964415 Msa0549140:intron 20.0%
!!! GGAATTATTTTTTCCTTAAA+AGG + chr4_1:43964412-43964431 None:intergenic 20.0%
!!! TAAGTTGAAACTTGATATTA+AGG - chr4_1:43965250-43965269 Msa0549140:intron 20.0%
!!! TAACAAATTTTTGATAGTCA+AGG - chr4_1:43965507-43965526 Msa0549140:intron 20.0%
!! AAAACTGCATCAATTAATTA+TGG + chr4_1:43966448-43966467 None:intergenic 20.0%
!! AAAAAAAAGAAAAGAAACCT+AGG - chr4_1:43966502-43966521 Msa0549140:intron 20.0%
!! AAAAAAAGAAAAGAAACCTA+GGG - chr4_1:43966503-43966522 Msa0549140:intron 20.0%
!! CAAACTTTATCTCAAATTAA+AGG + chr4_1:43966668-43966687 None:intergenic 20.0%
!! GTGAAAAAAAAAATGAAAAC+TGG - chr4_1:43966824-43966843 Msa0549140:intron 20.0%
!! ATTAAAATATAGCTTAGCTA+AGG - chr4_1:43966933-43966952 Msa0549140:intron 20.0%
!! ATAATAGATTCAATACATGT+TGG + chr4_1:43967000-43967019 None:intergenic 20.0%
!!! CATCTTTTTTTTTTTTTGAG+AGG + chr4_1:43967049-43967068 None:intergenic 20.0%
!! CTCTCAAAAAAAAAAAAAGA+TGG - chr4_1:43967047-43967066 Msa0549140:intron 20.0%
!! CTCTATTATAAATATTGTTG+AGG - chr4_1:43967247-43967266 Msa0549140:intron 20.0%
!! CAGAATTAATCATTGTTAAA+CGG + chr4_1:43967354-43967373 None:intergenic 20.0%
!! AAAAAGAATATTGTTATGAG+GGG + chr4_1:43967412-43967431 None:intergenic 20.0%
!! ACCAGAATCATAAATTTAAA+TGG - chr4_1:43967454-43967473 Msa0549140:intron 20.0%
!! TCCATTTAAATTTATGATTC+TGG + chr4_1:43967458-43967477 None:intergenic 20.0%
!! AAAAATAAACAAATTAGTGG+AGG + chr4_1:43967518-43967537 None:intergenic 20.0%
!! GTGATAGATATCATTAATAT+TGG + chr4_1:43967726-43967745 None:intergenic 20.0%
!!! AATATTTTTGATTGGTCTTA+TGG + chr4_1:43967912-43967931 None:intergenic 20.0%
!!! AAGACCAATCAAAAATATTT+TGG - chr4_1:43967913-43967932 Msa0549140:intron 20.0%
!! TAATTAATTAAACAAGTTGC+AGG - chr4_1:43967941-43967960 Msa0549140:intron 20.0%
!! TTATTTCCTTAAAAAAAACG+TGG + chr4_1:43968175-43968194 None:intergenic 20.0%
!! TAATTGTGAACAAAGAAAAT+GGG + chr4_1:43968379-43968398 None:intergenic 20.0%
!! TTAATTGTGAACAAAGAAAA+TGG + chr4_1:43968380-43968399 None:intergenic 20.0%
!!! TCTAAAATCATATTGATTCT+AGG - chr4_1:43968751-43968770 Msa0549140:intron 20.0%
!! TTAAAAAAGTCAAAACAAAG+GGG + chr4_1:43969028-43969047 None:intergenic 20.0%
!! CTTAAAAAAGTCAAAACAAA+GGG + chr4_1:43969029-43969048 None:intergenic 20.0%
!! TCTTAAAAAAGTCAAAACAA+AGG + chr4_1:43969030-43969049 None:intergenic 20.0%
!!! TATTTTGTCCAAAGAAAAAA+AGG - chr4_1:43969063-43969082 Msa0549140:intron 20.0%
!! ATATATGAATTCGATTTATG+AGG - chr4_1:43969203-43969222 Msa0549140:intron 20.0%
!! TATATGAATTCGATTTATGA+GGG - chr4_1:43969204-43969223 Msa0549140:intron 20.0%
!! CACTAATCTTGAAATAAATT+GGG + chr4_1:43969650-43969669 None:intergenic 20.0%
!! TCACTAATCTTGAAATAAAT+TGG + chr4_1:43969651-43969670 None:intergenic 20.0%
!! TTACTGGAATTAAAGTAAAT+GGG - chr4_1:43969974-43969993 Msa0549140:intron 20.0%
!! TTATGAAAAAGCCATTAAAT+TGG - chr4_1:43970052-43970071 Msa0549140:intron 20.0%
!! AAAAAACTCTATATAGCAAA+AGG - chr4_1:43970106-43970125 Msa0549140:intron 20.0%
!!! CAAATGAGATTTTTTTTTTG+AGG - chr4_1:43970329-43970348 Msa0549140:intron 20.0%
!! ATTCTATTTATATGTTTGGT+CGG + chr4_1:43970407-43970426 None:intergenic 20.0%
!!! AATCAAATGTTACTCTTTTT+TGG + chr4_1:43970568-43970587 None:intergenic 20.0%
!! GAAAAATAAATAAAGGTTAG+TGG - chr4_1:43971011-43971030 Msa0549140:intron 20.0%
!!! GAAAAAGAAATGAAGAATTT+TGG + chr4_1:43971064-43971083 None:intergenic 20.0%
!! TTCATTATTACTTTAACAGA+AGG - chr4_1:43971300-43971319 Msa0549140:intron 20.0%
!!! ATTTGTAACTCTTTTTCATT+GGG - chr4_1:43962325-43962344 Msa0549140:intron 20.0%
!! AGATAACAAACTTGATATAA+AGG - chr4_1:43972289-43972308 Msa0549140:intron 20.0%
!!! CGATTTCTTTGTTTAATTAT+AGG - chr4_1:43972416-43972435 Msa0549140:intron 20.0%
!!! TTTTCATGTAAGAACATTTT+TGG - chr4_1:43972649-43972668 Msa0549140:CDS 20.0%
!!! TAAGTTGTTAGAAATTTTGA+GGG + chr4_1:43972801-43972820 None:intergenic 20.0%
!!! AATTTGGTTATTTTACTTTC+AGG - chr4_1:43972857-43972876 Msa0549140:intron 20.0%
!! TCATTTATTCTATCTTAATG+AGG - chr4_1:43973213-43973232 Msa0549140:intron 20.0%
!!! CTTTCTTTTAATCTAAATAC+AGG - chr4_1:43973316-43973335 Msa0549140:CDS 20.0%
! AAGACAACAATAGAGAAAAT+AGG + chr4_1:43961685-43961704 None:intergenic 25.0%
! TTCATCATTACTTTAACAGA+AGG - chr4_1:43961716-43961735 Msa0549140:three_prime_UTR 25.0%
! AATCATGAAGGATATGAATT+TGG - chr4_1:43961979-43961998 Msa0549140:intron 25.0%
!! CATATAGATTTTCCATATCT+TGG - chr4_1:43962005-43962024 Msa0549140:intron 25.0%
!! GGTATAAAATTGACTTACTT+GGG + chr4_1:43962042-43962061 None:intergenic 25.0%
!! TGGTATAAAATTGACTTACT+TGG + chr4_1:43962043-43962062 None:intergenic 25.0%
! CAATGAAAAAGAGTTACAAA+TGG + chr4_1:43962326-43962345 None:intergenic 25.0%
!!! CATTTGTAACTCTTTTTCAT+TGG - chr4_1:43962324-43962343 Msa0549140:intron 25.0%
!!! GAACTTTGCTTTAAAACATT+TGG - chr4_1:43962518-43962537 Msa0549140:intron 25.0%
!!! ATTTTGAGAAACTTGATACT+TGG + chr4_1:43962744-43962763 None:intergenic 25.0%
! AAGTATCAAGTTTCTCAAAA+TGG - chr4_1:43962743-43962762 Msa0549140:CDS 25.0%
! GTATAACATTGATCATTAAC+TGG - chr4_1:43962774-43962793 Msa0549140:CDS 25.0%
!! TATGATTGTGTTAATTTGGA+TGG + chr4_1:43962970-43962989 None:intergenic 25.0%
! AAACTTACATTTAGACCAAT+TGG + chr4_1:43963401-43963420 None:intergenic 25.0%
!!! CTTTAAGATAAAAGAGATGA+CGG + chr4_1:43963786-43963805 None:intergenic 25.0%
!! TCATCTCTTTTATCTTAAAG+AGG - chr4_1:43963786-43963805 Msa0549140:CDS 25.0%
!!! AGTCTATTTCATTTTTTGCA+TGG - chr4_1:43963846-43963865 Msa0549140:CDS 25.0%
! TATTTCTTTCAATGAAATGC+AGG - chr4_1:43963887-43963906 Msa0549140:CDS 25.0%
! ATTTCTTTCAATGAAATGCA+GGG - chr4_1:43963888-43963907 Msa0549140:CDS 25.0%
!! AATTTTGTAGCACTGTTAAA+TGG + chr4_1:43964103-43964122 None:intergenic 25.0%
! AAAATTCTTCAGTTTGTGAA+GGG + chr4_1:43964294-43964313 None:intergenic 25.0%
! AAAAATTCTTCAGTTTGTGA+AGG + chr4_1:43964295-43964314 None:intergenic 25.0%
! TAATCACAACTTGGTTAAAA+TGG + chr4_1:43964318-43964337 None:intergenic 25.0%
!!! GATTTTTTGTAATCACAACT+TGG + chr4_1:43964327-43964346 None:intergenic 25.0%
! GTGATTACAAAAAATCTACT+AGG - chr4_1:43964331-43964350 Msa0549140:intron 25.0%
! TCAAACATGAATATACCATT+AGG - chr4_1:43964365-43964384 Msa0549140:intron 25.0%
!!! TTTTGATAGCACTAATTTCA+TGG + chr4_1:43964775-43964794 None:intergenic 25.0%
! ATAACTTGATCATCATACAT+AGG + chr4_1:43965167-43965186 None:intergenic 25.0%
! CAATGCTCGTAATATTAATT+CGG - chr4_1:43965292-43965311 Msa0549140:intron 25.0%
! AATGCTCGTAATATTAATTC+GGG - chr4_1:43965293-43965312 Msa0549140:intron 25.0%
!!! CATGAAAATATTTGGTGTTA+TGG + chr4_1:43965430-43965449 None:intergenic 25.0%
! TATGATTTGACCCAAATTAA+AGG - chr4_1:43965592-43965611 Msa0549140:intron 25.0%
!!! TTCTAGAACTCCTTTAATTT+GGG + chr4_1:43965605-43965624 None:intergenic 25.0%
! AACAATTTCCTATGGTTTAT+GGG - chr4_1:43965623-43965642 Msa0549140:intron 25.0%
! ATAAAAAAGCAAGTGTCAAA+AGG + chr4_1:43966089-43966108 None:intergenic 25.0%
!!! TTTGACACTTGCTTTTTTAT+TGG - chr4_1:43966089-43966108 Msa0549140:intron 25.0%
!! TGATGCAGTTTTTCATAAAA+AGG - chr4_1:43966456-43966475 Msa0549140:intron 25.0%
!!! TTCGAAAGGTTCTTTTATTT+GGG - chr4_1:43966766-43966785 Msa0549140:intron 25.0%
!!! CATTTTTTTTTTCACAGTCA+AGG + chr4_1:43966819-43966838 None:intergenic 25.0%
!!! TGTGATTTTTTGGTTAACAA+TGG - chr4_1:43966865-43966884 Msa0549140:intron 25.0%
!! ATTTTCATTAATCCTCTAAC+CGG + chr4_1:43966896-43966915 None:intergenic 25.0%
! GAAAGAGAGATATATTAATG+AGG + chr4_1:43967171-43967190 None:intergenic 25.0%
! ATAAATATTGTTGAGGTTCA+TGG - chr4_1:43967254-43967273 Msa0549140:intron 25.0%
! TCATGGTATAACTAATATTG+TGG - chr4_1:43967271-43967290 Msa0549140:intron 25.0%
!!! GTAACAAAAAAGTATTGTTG+AGG + chr4_1:43967304-43967323 None:intergenic 25.0%
! GTTACTATAATATTTGTACG+AGG - chr4_1:43967319-43967338 Msa0549140:intron 25.0%
! CGTTTAACAATGATTAATTC+TGG - chr4_1:43967352-43967371 Msa0549140:intron 25.0%
! TAACAATGATTAATTCTGGT+TGG - chr4_1:43967356-43967375 Msa0549140:intron 25.0%
! TTGGTTGAAGTGATAAAAAA+CGG + chr4_1:43967483-43967502 None:intergenic 25.0%
!!! TAAGATAGTGCTTTTTTAAG+AGG - chr4_1:43967546-43967565 Msa0549140:intron 25.0%
! ATATTAATATCAGGGAAGTA+GGG + chr4_1:43967639-43967658 None:intergenic 25.0%
! AATATTAATATCAGGGAAGT+AGG + chr4_1:43967640-43967659 None:intergenic 25.0%
! ATATAGTAAGTAAAAGTAGG+TGG + chr4_1:43967815-43967834 None:intergenic 25.0%
!!! TCAGCCAAAATATTTTTGAT+TGG + chr4_1:43967920-43967939 None:intergenic 25.0%
!!! TTTTAAGAGTTAAAGCTCAT+CGG + chr4_1:43967987-43968006 None:intergenic 25.0%
!! AGCTTTAACTCTTAAAACAT+GGG - chr4_1:43967990-43968009 Msa0549140:intron 25.0%
!!! AAACCACATTTTTGAAGAAA+GGG + chr4_1:43968066-43968085 None:intergenic 25.0%
!!! GTAATTCCACGTTTTTTTTA+AGG - chr4_1:43968166-43968185 Msa0549140:intron 25.0%
!! TAAGCTCAAAATTTTACTCA+CGG - chr4_1:43968192-43968211 Msa0549140:intron 25.0%
! TTCACAATTAACTAAATGCA+AGG - chr4_1:43968389-43968408 Msa0549140:intron 25.0%
! TGAACCAAACCAATTAAAAA+GGG + chr4_1:43968781-43968800 None:intergenic 25.0%
! TTGAACCAAACCAATTAAAA+AGG + chr4_1:43968782-43968801 None:intergenic 25.0%
! AAAAAGGAGTTCGATATAAA+AGG + chr4_1:43968836-43968855 None:intergenic 25.0%
! AGAGTAGTTGAAAATTGATA+AGG - chr4_1:43968873-43968892 Msa0549140:intron 25.0%
! GATATTGGAAAGAGAAAATT+AGG - chr4_1:43968960-43968979 Msa0549140:intron 25.0%
!!! TTGACTTTTTTAAGAAAGAG+AGG - chr4_1:43969035-43969054 Msa0549140:intron 25.0%
!!! TTTTTTAAGAAAGAGAGGTT+GGG - chr4_1:43969040-43969059 Msa0549140:intron 25.0%
!!! AAACTACACCTTTTTTTCTT+TGG + chr4_1:43969074-43969093 None:intergenic 25.0%
! AGAAAGAGATTCTGATAATT+TGG + chr4_1:43969272-43969291 None:intergenic 25.0%
! TAATCTTGAAATAAATTGGG+TGG + chr4_1:43969647-43969666 None:intergenic 25.0%
! AAGAATCTTGCAATTTATCA+GGG + chr4_1:43969868-43969887 None:intergenic 25.0%
! ATAAATTGCAAGATTCTTGT+AGG - chr4_1:43969870-43969889 Msa0549140:intron 25.0%
! TAAATTGCAAGATTCTTGTA+GGG - chr4_1:43969871-43969890 Msa0549140:intron 25.0%
! CATTTACTTTAATTCCAGTA+AGG + chr4_1:43969975-43969994 None:intergenic 25.0%
! CTTACTGGAATTAAAGTAAA+TGG - chr4_1:43969973-43969992 Msa0549140:intron 25.0%
! ATAATCAACGAAGAAAAAAG+AGG - chr4_1:43970207-43970226 Msa0549140:intron 25.0%
!! CAAATGAGATTTTTGTTAAG+CGG - chr4_1:43970355-43970374 Msa0549140:intron 25.0%
! CAAGGAAATTTCAATTCATT+AGG + chr4_1:43970491-43970510 None:intergenic 25.0%
! ATAGAGAAAGACTAGAATAA+AGG + chr4_1:43970682-43970701 None:intergenic 25.0%
!! GTATTTAGAACATAAAATGG+AGG + chr4_1:43970716-43970735 None:intergenic 25.0%
!!! AAGAAATGAAGAATTTTGGT+GGG + chr4_1:43971060-43971079 None:intergenic 25.0%
!! AAAGAAATGAAGAATTTTGG+TGG + chr4_1:43971061-43971080 None:intergenic 25.0%
!!! ATGAATGAATGAATTTGTTG+TGG + chr4_1:43971119-43971138 None:intergenic 25.0%
! GAATAAGAAAGAAAAAAGCA+AGG + chr4_1:43971158-43971177 None:intergenic 25.0%
! TGATTCATATCATCGATATA+AGG - chr4_1:43971530-43971549 Msa0549140:CDS 25.0%
! AATATAGTCAAAACAATTGC+AGG - chr4_1:43971771-43971790 Msa0549140:CDS 25.0%
! CAATGAAAAAGAGTTACAAA+TGG + chr4_1:43962326-43962345 None:intergenic 25.0%
!!! CATTTGTAACTCTTTTTCAT+TGG - chr4_1:43962324-43962343 Msa0549140:intron 25.0%
!! TGATAATGTGCAACTAAATA+TGG + chr4_1:43972161-43972180 None:intergenic 25.0%
! AAATATCAAGTCTCTCAAAA+GGG - chr4_1:43972221-43972240 Msa0549140:CDS 25.0%
!! GTAAGTTGTTAGAAATTTTG+AGG + chr4_1:43972802-43972821 None:intergenic 25.0%
! CTAACAACTTACATGTTATT+TGG - chr4_1:43972810-43972829 Msa0549140:CDS 25.0%
!!! AACTTTTTCATAATGTGTGT+AGG - chr4_1:43973112-43973131 Msa0549140:intron 25.0%
! ATCTATTTCACTTTCTTTCA+TGG - chr4_1:43973274-43973293 Msa0549140:intron 25.0%
!! CTTTGTTAGACAATTTTGAA+TGG - chr4_1:43973373-43973392 Msa0549140:CDS 25.0%
! ACCTTTGTAGATTACAAAAA+TGG - chr4_1:43973426-43973445 Msa0549140:CDS 25.0%
!!! ACCATTTTTGTAATCTACAA+AGG + chr4_1:43973430-43973449 None:intergenic 25.0%
!! AATTTTGTAGCACTGTTAAA+TGG + chr4_1:43964103-43964122 None:intergenic 25.0%
TTCAATGAACCTATTTGCAA+TGG + chr4_1:43961764-43961783 None:intergenic 30.0%
TGCAAATAGGTTCATTGAAT+AGG - chr4_1:43961765-43961784 Msa0549140:three_prime_UTR 30.0%
! AATAGGAATGATTTTCCAGA+AGG - chr4_1:43961782-43961801 Msa0549140:exon 30.0%
TCTTCTGCATATCAATATGA+AGG - chr4_1:43961824-43961843 Msa0549140:CDS 30.0%
CAATAACCTCATTGATGAAT+TGG - chr4_1:43962183-43962202 Msa0549140:intron 30.0%
! TTTACATAAGACGGCTATTT+TGG + chr4_1:43962284-43962303 None:intergenic 30.0%
! TATTCATCTTCTAGAGATTG+AGG + chr4_1:43962356-43962375 None:intergenic 30.0%
! CAATCTCTAGAAGATGAATA+TGG - chr4_1:43962356-43962375 Msa0549140:CDS 30.0%
! TTGAAAGTCTTTTCTGTAGT+TGG + chr4_1:43962489-43962508 None:intergenic 30.0%
AAAAGACTTTCAAAACTACG+CGG - chr4_1:43962496-43962515 Msa0549140:intron 30.0%
TTGGAGATAGAGTAAAACAT+TGG - chr4_1:43962537-43962556 Msa0549140:intron 30.0%
AGTCAAAATGGATATGCAAA+TGG - chr4_1:43962587-43962606 Msa0549140:intron 30.0%
! TGATAGTGTGCAGTTAAATA+AGG + chr4_1:43962683-43962702 None:intergenic 30.0%
GTTTCTCAAAATGGTTTGAT+CGG - chr4_1:43962752-43962771 Msa0549140:CDS 30.0%
!! TTATGTTTGTTATCTGAGAG+CGG + chr4_1:43962806-43962825 None:intergenic 30.0%
CAAACATAATCAAAATGCTG+CGG - chr4_1:43962817-43962836 Msa0549140:CDS 30.0%
GATTGCTCTTTAGTAAACTT+TGG + chr4_1:43963135-43963154 None:intergenic 30.0%
GAATTTGCATTGCTTAATTG+AGG + chr4_1:43963228-43963247 None:intergenic 30.0%
! CTCTGTTGGATAATTTTGAA+TGG - chr4_1:43963944-43963963 Msa0549140:CDS 30.0%
AAAAGATATCAAAAGCTCTC+AGG - chr4_1:43964024-43964043 Msa0549140:intron 30.0%
TGTGTTTACAACAACAACTT+TGG + chr4_1:43964137-43964156 None:intergenic 30.0%
AAATATAAGTTCGACAGATG+AGG - chr4_1:43964525-43964544 Msa0549140:intron 30.0%
AATATAAGTTCGACAGATGA+GGG - chr4_1:43964526-43964545 Msa0549140:intron 30.0%
TTAATCTCGAATAACCTTTG+AGG - chr4_1:43964557-43964576 Msa0549140:intron 30.0%
AATGCTGGTAAATCAAATGT+TGG - chr4_1:43964704-43964723 Msa0549140:intron 30.0%
ATGCTGGTAAATCAAATGTT+GGG - chr4_1:43964705-43964724 Msa0549140:intron 30.0%
ATCCATATTAACCATTATGG+AGG + chr4_1:43964732-43964751 None:intergenic 30.0%
TCCATAATGGTTAATATGGA+TGG - chr4_1:43964731-43964750 Msa0549140:intron 30.0%
ACCATCCATATTAACCATTA+TGG + chr4_1:43964735-43964754 None:intergenic 30.0%
GAAATTAGTGCTATCAAAAC+AGG - chr4_1:43964776-43964795 Msa0549140:intron 30.0%
ACTACTCTTATGCTTACAAA+TGG - chr4_1:43964871-43964890 Msa0549140:intron 30.0%
AACATAAGAACAACTTGACA+TGG + chr4_1:43964907-43964926 None:intergenic 30.0%
! ACCCATATCATTTTCATTTG+CGG + chr4_1:43964935-43964954 None:intergenic 30.0%
CAAATGAAAATGATATGGGT+GGG - chr4_1:43964935-43964954 Msa0549140:intron 30.0%
AGCAGATGCATGAAAATATT+TGG + chr4_1:43965438-43965457 None:intergenic 30.0%
!! GTTCTAGAACTCCTTTAATT+TGG + chr4_1:43965606-43965625 None:intergenic 30.0%
!! AGTTCTAGAACAATTTCCTA+TGG - chr4_1:43965615-43965634 Msa0549140:intron 30.0%
GAACAATTTCCTATGGTTTA+TGG - chr4_1:43965622-43965641 Msa0549140:intron 30.0%
CAAAATATCCCATAAACCAT+AGG + chr4_1:43965634-43965653 None:intergenic 30.0%
AGGAATTAGCAAGAGAAAAT+AGG + chr4_1:43965909-43965928 None:intergenic 30.0%
! TTTTCTCTTGCTAATTCCTA+AGG - chr4_1:43965910-43965929 Msa0549140:intron 30.0%
! AAAATGACCTTGAACTTGTT+GGG + chr4_1:43966333-43966352 None:intergenic 30.0%
ACTGCATCAATTAATTATGG+AGG + chr4_1:43966445-43966464 None:intergenic 30.0%
! GTTCGAAAGGTTCTTTTATT+TGG - chr4_1:43966765-43966784 Msa0549140:intron 30.0%
!! TTTTATTTGGGCAAAGAGTT+TGG - chr4_1:43966778-43966797 Msa0549140:intron 30.0%
TTTATTTGGGCAAAGAGTTT+GGG - chr4_1:43966779-43966798 Msa0549140:intron 30.0%
! TTTTCATTAATCCTCTAACC+AGG + chr4_1:43966895-43966914 None:intergenic 30.0%
AAAATATAGCTTAGCTAAGG+CGG - chr4_1:43966936-43966955 Msa0549140:intron 30.0%
TAGCTACTCTCTAAACTATT+GGG + chr4_1:43967115-43967134 None:intergenic 30.0%
TTAGCTACTCTCTAAACTAT+TGG + chr4_1:43967116-43967135 None:intergenic 30.0%
!! ATATATTAATGAGGAGTGCT+AGG + chr4_1:43967162-43967181 None:intergenic 30.0%
TGGTATAACTAATATTGTGG+AGG - chr4_1:43967274-43967293 Msa0549140:intron 30.0%
GGTATAACTAATATTGTGGA+GGG - chr4_1:43967275-43967294 Msa0549140:intron 30.0%
! AATTCTGGTTGGCAAATATT+TGG - chr4_1:43967367-43967386 Msa0549140:intron 30.0%
! ATTCTGGTTGGCAAATATTT+GGG - chr4_1:43967368-43967387 Msa0549140:intron 30.0%
CACTTCAACCAATATATTGT+TGG - chr4_1:43967491-43967510 Msa0549140:intron 30.0%
TACATTCAACGAAATGCATA+AGG - chr4_1:43967673-43967692 Msa0549140:intron 30.0%
ACTTGACAATATTTGATCGT+TGG - chr4_1:43967853-43967872 Msa0549140:intron 30.0%
! GAGCTTTAACTCTTAAAACA+TGG - chr4_1:43967989-43968008 Msa0549140:intron 30.0%
!! CATTTTTGAAGAAAGGGATA+GGG + chr4_1:43968060-43968079 None:intergenic 30.0%
!! ACATTTTTGAAGAAAGGGAT+AGG + chr4_1:43968061-43968080 None:intergenic 30.0%
TATCCCTTTCTTCAAAAATG+TGG - chr4_1:43968060-43968079 Msa0549140:intron 30.0%
!! CAAACCACATTTTTGAAGAA+AGG + chr4_1:43968067-43968086 None:intergenic 30.0%
!!! ACACCTTCTATTTTTGAAGT+GGG + chr4_1:43969102-43969121 None:intergenic 30.0%
! ATCTTTTTGTCCATGTGATA+AGG + chr4_1:43968356-43968375 None:intergenic 30.0%
GGGAGAGAAAAAATCTTAAA+GGG + chr4_1:43968438-43968457 None:intergenic 30.0%
AGGGAGAGAAAAAATCTTAA+AGG + chr4_1:43968439-43968458 None:intergenic 30.0%
! TAAATTTGAAATTCAAGGCG+TGG + chr4_1:43968594-43968613 None:intergenic 30.0%
!! AACTCCCTTTTTAATTGGTT+TGG - chr4_1:43968774-43968793 Msa0549140:intron 30.0%
!!! CTTTTTTAAGAAAGAGAGGT+TGG - chr4_1:43969039-43969058 Msa0549140:intron 30.0%
!!! ACACCTTCTATTTTTGAAGT+GGG - chr4_1:43969102-43969121 Msa0549140:intron 30.0%
! GATTCTGATAATTTGGAGTT+TGG + chr4_1:43969265-43969284 None:intergenic 30.0%
TTTAGTAACGATGTATGTCA+GGG + chr4_1:43969424-43969443 None:intergenic 30.0%
! TTTTAGTAACGATGTATGTC+AGG + chr4_1:43969425-43969444 None:intergenic 30.0%
ATGAGAGAAAATAGAGGAAA+AGG + chr4_1:43969451-43969470 None:intergenic 30.0%
TCTCAAATGAGAGAAAATAG+AGG + chr4_1:43969457-43969476 None:intergenic 30.0%
GCACATAAAGGAGAAAATAA+AGG + chr4_1:43969487-43969506 None:intergenic 30.0%
AGAATCTTGCAATTTATCAG+GGG + chr4_1:43969867-43969886 None:intergenic 30.0%
CAAGAATCTTGCAATTTATC+AGG + chr4_1:43969869-43969888 None:intergenic 30.0%
ATCTATTGAGACAGGAATAA+AGG + chr4_1:43969911-43969930 None:intergenic 30.0%
!!! AGATTCCTCCTTTTTTCTTT+TGG - chr4_1:43969927-43969946 Msa0549140:intron 30.0%
TTTCTGCTCCAAAAGAAAAA+AGG + chr4_1:43969938-43969957 None:intergenic 30.0%
AAGTAAATGGGCAATTGTTA+AGG - chr4_1:43969986-43970005 Msa0549140:intron 30.0%
! AAAGAGGCACAAATAATTGA+AGG - chr4_1:43970223-43970242 Msa0549140:intron 30.0%
! AAGAGGCACAAATAATTGAA+GGG - chr4_1:43970224-43970243 Msa0549140:intron 30.0%
TATACAGAAGCTAATTGGTT+TGG - chr4_1:43970253-43970272 Msa0549140:intron 30.0%
GAATTGAAATTTCCTTGTTG+CGG - chr4_1:43970494-43970513 Msa0549140:intron 30.0%
AAGAGCTACAAATGATTGAA+AGG - chr4_1:43970905-43970924 Msa0549140:intron 30.0%
TTCATAGTCAATTAATGCGA+CGG + chr4_1:43970981-43971000 None:intergenic 30.0%
CGTCATCATCAATTAATTCA+CGG - chr4_1:43971215-43971234 Msa0549140:intron 30.0%
TAGACAACAAGAGAGAAAAT+AGG + chr4_1:43971269-43971288 None:intergenic 30.0%
TTCAATGAACCTATTTGCAA+TGG + chr4_1:43961764-43961783 None:intergenic 30.0%
AATAGAAATGATTTCCCAGA+AGG - chr4_1:43971366-43971385 Msa0549140:CDS 30.0%
TATCCTCAAAAAATCAGTGA+TGG - chr4_1:43971486-43971505 Msa0549140:intron 30.0%
!!! TTTCCATCACTGATTTTTTG+AGG + chr4_1:43971492-43971511 None:intergenic 30.0%
! AAAATCAGTGATGGAAACAA+CGG - chr4_1:43971495-43971514 Msa0549140:intron 30.0%
TATCATGAAGGATATGAACT+TGG - chr4_1:43971563-43971582 Msa0549140:CDS 30.0%
! CTTACAGATTTTCCATATCT+TGG - chr4_1:43971589-43971608 Msa0549140:CDS 30.0%
!! TATTCATCTTCTAGAGTTTG+AGG + chr4_1:43971834-43971853 None:intergenic 30.0%
! CAAACTCTAGAAGATGAATA+TGG - chr4_1:43971834-43971853 Msa0549140:intron 30.0%
TTATCACTTACATGATGAGA+GGG + chr4_1:43971872-43971891 None:intergenic 30.0%
TTTATCACTTACATGATGAG+AGG + chr4_1:43971873-43971892 None:intergenic 30.0%
GAACTTTGCTTCAAAACATT+TGG - chr4_1:43971996-43972015 Msa0549140:intron 30.0%
TTGGAGATAGAGTAAAACAT+TGG - chr4_1:43962537-43962556 Msa0549140:intron 30.0%
ATGTGCAACTAAATATGGTT+CGG + chr4_1:43972156-43972175 None:intergenic 30.0%
!! CTTTTGAGAGACTTGATATT+TGG + chr4_1:43972222-43972241 None:intergenic 30.0%
CAAATATCAAGTCTCTCAAA+AGG - chr4_1:43972220-43972239 Msa0549140:CDS 30.0%
!!! GTTTTTAGGATAATCTCCAT+TGG + chr4_1:43972458-43972477 None:intergenic 30.0%
! GATTGCTCTTTTGTAAACTT+TGG + chr4_1:43972508-43972527 None:intergenic 30.0%
AGTTTACAAAAGAGCAATCA+AGG - chr4_1:43972509-43972528 Msa0549140:intron 30.0%
! AGTGGTTCATTTGATTTCAT+TGG - chr4_1:43972538-43972557 Msa0549140:intron 30.0%
AACACTTACATTTAGACCAA+TGG + chr4_1:43972775-43972794 None:intergenic 30.0%
AGCAAATCACTTTCATATCA+TGG - chr4_1:43972985-43973004 Msa0549140:CDS 30.0%
! TTTTAATCTAAATACAGGGC+TGG - chr4_1:43973321-43973340 Msa0549140:CDS 30.0%
AAAAGATATCAAAAGCTCTC+AGG - chr4_1:43964024-43964043 Msa0549140:intron 30.0%
!!! CTTTTTTGTTGTCTGATGAA+AGG + chr4_1:43973497-43973516 None:intergenic 30.0%
TTTCCAGAAGGCTTCATATT+TGG - chr4_1:43961794-43961813 Msa0549140:CDS 35.0%
!! GTGAAAGTATCCCATATACT+TGG + chr4_1:43961875-43961894 None:intergenic 35.0%
TATCCTCAAAAGATCAGTGA+TGG - chr4_1:43961902-43961921 Msa0549140:CDS 35.0%
! TTTCCATCACTGATCTTTTG+AGG + chr4_1:43961908-43961927 None:intergenic 35.0%
! AAGATCAGTGATGGAAACAA+TGG - chr4_1:43961911-43961930 Msa0549140:CDS 35.0%
TGACTCGTATCATCGATATA+AGG - chr4_1:43961946-43961965 Msa0549140:CDS 35.0%
CATCGATATAAGGAAGATGT+TGG - chr4_1:43961956-43961975 Msa0549140:CDS 35.0%
GAGTATTCTAGACCAAGATA+TGG + chr4_1:43962020-43962039 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG - chr4_1:43962130-43962149 Msa0549140:CDS 35.0%
! AGTGGTGGAATTAATCAAGA+AGG - chr4_1:43962148-43962167 Msa0549140:CDS 35.0%
TAACCTCATTGATGAATTGG+TGG - chr4_1:43962186-43962205 Msa0549140:intron 35.0%
! ATTGATGAATTGGTGGCAAA+TGG - chr4_1:43962193-43962212 Msa0549140:intron 35.0%
! TCTCTAGAAGATGAATATGG+CGG - chr4_1:43962359-43962378 Msa0549140:CDS 35.0%
! AAAGTCTTTTCTGTAGTTGG+AGG + chr4_1:43962486-43962505 None:intergenic 35.0%
GTGTGCAGTTAAATAAGGTT+CGG + chr4_1:43962678-43962697 None:intergenic 35.0%
TTATAGGTTTATGGATCCCT+TGG - chr4_1:43963059-43963078 Msa0549140:CDS 35.0%
!! GGTTTTTGGATAATCTCCAT+TGG + chr4_1:43963085-43963104 None:intergenic 35.0%
AACTAGACAGAGAATCTGTT+AGG + chr4_1:43963257-43963276 None:intergenic 35.0%
!! AATTTCAGGTTGCTTCAGAA+TGG - chr4_1:43963510-43963529 Msa0549140:CDS 35.0%
TGGTTGTATGTTTATCCAAG+AGG - chr4_1:43963530-43963549 Msa0549140:intron 35.0%
AAAAAGTCTCGAATTCCTCT+TGG + chr4_1:43963548-43963567 None:intergenic 35.0%
ATGTAAAGGGATACTTTGCA+TGG - chr4_1:43963920-43963939 Msa0549140:CDS 35.0%
! TGGATAATTTTGAATGGCAC+AGG - chr4_1:43963950-43963969 Msa0549140:CDS 35.0%
! GGATAATTTTGAATGGCACA+GGG - chr4_1:43963951-43963970 Msa0549140:CDS 35.0%
! GATAATTTTGAATGGCACAG+GGG - chr4_1:43963952-43963971 Msa0549140:CDS 35.0%
!!! CCATATTTTGAGATGCCTAA+TGG + chr4_1:43964383-43964402 None:intergenic 35.0%
CCATTAGGCATCTCAAAATA+TGG - chr4_1:43964380-43964399 Msa0549140:intron 35.0%
! GATTGTTTTCCTCAGGTTTT+AGG + chr4_1:43964490-43964509 None:intergenic 35.0%
AAGATCCTATTCCTTCAATG+AGG - chr4_1:43964639-43964658 Msa0549140:intron 35.0%
GTCCTCCATAATGGTTAATA+TGG - chr4_1:43964727-43964746 Msa0549140:intron 35.0%
AGCATAAGAGTAGTAGCATA+TGG + chr4_1:43964865-43964884 None:intergenic 35.0%
! TCAAGTTGTTCTTATGTTGC+TGG - chr4_1:43964909-43964928 Msa0549140:intron 35.0%
GCCGCAAATGAAAATGATAT+GGG - chr4_1:43964931-43964950 Msa0549140:intron 35.0%
GCAAATGAAAATGATATGGG+TGG - chr4_1:43964934-43964953 Msa0549140:intron 35.0%
ATGTTGAAACAGATGCCTTT+GGG - chr4_1:43964980-43964999 Msa0549140:intron 35.0%
ACTCAAATTCAGACTTAGAC+TGG + chr4_1:43965062-43965081 None:intergenic 35.0%
GAATTTGAGTCTACTGTTGA+TGG - chr4_1:43965072-43965091 Msa0549140:intron 35.0%
! TCTACTGTTGATGGAGATAT+GGG - chr4_1:43965081-43965100 Msa0549140:intron 35.0%
GATATGGGGAATAATCCTTT+AGG - chr4_1:43965096-43965115 Msa0549140:intron 35.0%
ACTCTAACATCAACACCTAA+AGG + chr4_1:43965114-43965133 None:intergenic 35.0%
!! TTAGGTGTTGATGTTAGAGT+TGG - chr4_1:43965114-43965133 Msa0549140:intron 35.0%
!! TAGGTGTTGATGTTAGAGTT+GGG - chr4_1:43965115-43965134 Msa0549140:intron 35.0%
! TACGAGCATTGTTCAATTGA+CGG + chr4_1:43965283-43965302 None:intergenic 35.0%
CTATTCACGTATTTCCTAAC+GGG + chr4_1:43965341-43965360 None:intergenic 35.0%
CCTATTCACGTATTTCCTAA+CGG + chr4_1:43965342-43965361 None:intergenic 35.0%
AAGGCACGTTGATATAAAGA+CGG - chr4_1:43965401-43965420 Msa0549140:intron 35.0%
GCTTCTCTTGAAGATTATCA+TGG - chr4_1:43965484-43965503 Msa0549140:intron 35.0%
ATGGGCATTTGGTTGTAATT+AGG + chr4_1:43965689-43965708 None:intergenic 35.0%
TATGTCACACCTCAAGTAAT+GGG + chr4_1:43965707-43965726 None:intergenic 35.0%
! GAGTATTCCAAGTTTAAGGT+AGG + chr4_1:43965745-43965764 None:intergenic 35.0%
!! TTTTTCTCCTTGTTGTGGAA+GGG + chr4_1:43965805-43965824 None:intergenic 35.0%
GAAAAAGGAACGATGTTAGA+TGG - chr4_1:43965819-43965838 Msa0549140:intron 35.0%
AGGACGAAAAACTCTATAGT+AGG + chr4_1:43965889-43965908 None:intergenic 35.0%
AGAGATTGTCCATAGCATTA+CGG + chr4_1:43966056-43966075 None:intergenic 35.0%
GGATAAACAAAGAAGACAGT+GGG + chr4_1:43966229-43966248 None:intergenic 35.0%
AGGATAAACAAAGAAGACAG+TGG + chr4_1:43966230-43966249 None:intergenic 35.0%
GATTAGGATCTACAGTTCAA+GGG - chr4_1:43966267-43966286 Msa0549140:intron 35.0%
CTATAATCCCAACAAGTTCA+AGG - chr4_1:43966323-43966342 Msa0549140:intron 35.0%
GAAAATGACCTTGAACTTGT+TGG + chr4_1:43966334-43966353 None:intergenic 35.0%
AGAAACTTGGAATCTTTGAC+TGG - chr4_1:43966536-43966555 Msa0549140:intron 35.0%
GAAACTTGGAATCTTTGACT+GGG - chr4_1:43966537-43966556 Msa0549140:intron 35.0%
ATAACTCCACAATGACAGTA+AGG + chr4_1:43966710-43966729 None:intergenic 35.0%
TGCTATTGTAGTTGTTCGAA+AGG - chr4_1:43966752-43966771 Msa0549140:intron 35.0%
TTATTTGGGCAAAGAGTTTG+GGG - chr4_1:43966780-43966799 Msa0549140:intron 35.0%
TTGGAATGTGATAGTAATCG+CGG + chr4_1:43966981-43967000 None:intergenic 35.0%
GTGCGTTAATCACATAAGAA+TGG - chr4_1:43967577-43967596 Msa0549140:intron 35.0%
TAATGATATCTATCACGTGC+AGG - chr4_1:43967730-43967749 Msa0549140:intron 35.0%
! TGATCGTTGGTTAATTTGAC+TGG - chr4_1:43967866-43967885 Msa0549140:intron 35.0%
ACACCCACTTCAAAAATAGA+AGG - chr4_1:43968311-43968330 Msa0549140:intron 35.0%
!!! CACACCTTCTATTTTTGAAG+TGG + chr4_1:43969101-43969120 None:intergenic 35.0%
! AAAAAATCTTAAAGGGCGTG+AGG + chr4_1:43968431-43968450 None:intergenic 35.0%
AAATCATTATGACCGAGACA+GGG + chr4_1:43968458-43968477 None:intergenic 35.0%
AAACTTTGTCTTCTTCCTTG+TGG - chr4_1:43968487-43968506 Msa0549140:intron 35.0%
! CTAGGAACTCCCTTTTTAAT+TGG - chr4_1:43968769-43968788 Msa0549140:intron 35.0%
AACGATGGTTCAATTGGTAA+AGG - chr4_1:43968917-43968936 Msa0549140:intron 35.0%
ATGGTTCAATTGGTAAAGGT+AGG - chr4_1:43968921-43968940 Msa0549140:intron 35.0%
TGGTTCAATTGGTAAAGGTA+GGG - chr4_1:43968922-43968941 Msa0549140:intron 35.0%
CCAATATCCATTAGTTGTTG+TGG + chr4_1:43968948-43968967 None:intergenic 35.0%
! CCACAACAACTAATGGATAT+TGG - chr4_1:43968945-43968964 Msa0549140:intron 35.0%
!!! CACACCTTCTATTTTTGAAG+TGG - chr4_1:43969101-43969120 Msa0549140:intron 35.0%
ACACCCACTTCAAAAATAGA+AGG + chr4_1:43968311-43968330 None:intergenic 35.0%
! CTGATAATTTGGAGTTTGGT+CGG + chr4_1:43969261-43969280 None:intergenic 35.0%
AGTATGTCTCAAGCACATAA+AGG + chr4_1:43969499-43969518 None:intergenic 35.0%
GTTTCATGGCTAATAGAAGT+CGG + chr4_1:43969586-43969605 None:intergenic 35.0%
!! AAATTGGGTGGTTTTTGAAG+AGG + chr4_1:43969635-43969654 None:intergenic 35.0%
TCATCGCAAATAAATTTGCC+AGG + chr4_1:43969757-43969776 None:intergenic 35.0%
ATAATGAGTTACTGCCTTAC+TGG - chr4_1:43969958-43969977 Msa0549140:intron 35.0%
AATAGGGACGACCAATTTAA+TGG + chr4_1:43970066-43970085 None:intergenic 35.0%
GTACGTATACAGAAGCTAAT+TGG - chr4_1:43970248-43970267 Msa0549140:intron 35.0%
!! AAGCTAATTGGTTTGGTTAG+TGG - chr4_1:43970260-43970279 Msa0549140:intron 35.0%
! TTGCTTGTGTTTGGAGTATT+TGG + chr4_1:43970544-43970563 None:intergenic 35.0%
!!! TTTTTTGGCTTGCTTGTGTT+TGG + chr4_1:43970553-43970572 None:intergenic 35.0%
AGAGTTGTCATACAATTCCA+TGG - chr4_1:43970637-43970656 Msa0549140:intron 35.0%
GAGTTGTCATACAATTCCAT+GGG - chr4_1:43970638-43970657 Msa0549140:intron 35.0%
AGTTGTCATACAATTCCATG+GGG - chr4_1:43970639-43970658 Msa0549140:intron 35.0%
ATCAAGATATTGTTTCCCCA+TGG + chr4_1:43970657-43970676 None:intergenic 35.0%
GATGATAAACCTGTCAAGAA+GGG + chr4_1:43970818-43970837 None:intergenic 35.0%
TGATGATAAACCTGTCAAGA+AGG + chr4_1:43970819-43970838 None:intergenic 35.0%
TACGTAGAACAGTACCTAAT+TGG - chr4_1:43970930-43970949 Msa0549140:intron 35.0%
CTATGAGTCACTAACCAATT+AGG + chr4_1:43970947-43970966 None:intergenic 35.0%
! TTGTGGACTATGAAAATGTG+TGG + chr4_1:43971102-43971121 None:intergenic 35.0%
! TGATGACGATGACAAAAACA+AGG + chr4_1:43971203-43971222 None:intergenic 35.0%
TCTTCTGCATATCAGTATGA+AGG - chr4_1:43971408-43971427 Msa0549140:intron 35.0%
!! GTGAAAGTATCCCATATACT+TGG + chr4_1:43961875-43961894 None:intergenic 35.0%
CATCGATATAAGGAAGATGT+TGG - chr4_1:43961956-43961975 Msa0549140:CDS 35.0%
GAGTATTCTAGACCAAGATA+TGG + chr4_1:43962020-43962039 None:intergenic 35.0%
! ACTCTAGAAGATGAATATGG+CGG - chr4_1:43971837-43971856 Msa0549140:intron 35.0%
GGATAACTTTGAATGAACCA+TGG - chr4_1:43972036-43972055 Msa0549140:intron 35.0%
!! TCAAGTTTGTTATCTGAGAG+TGG + chr4_1:43972284-43972303 None:intergenic 35.0%
CTACAGACTTTATGTTTGGA+TGG - chr4_1:43972324-43972343 Msa0549140:intron 35.0%
TTATAGGTTTATGGATCCCT+TGG - chr4_1:43963059-43963078 Msa0549140:CDS 35.0%
! ACTAAGGCTCTCATGTTTTT+AGG + chr4_1:43972472-43972491 None:intergenic 35.0%
TGGTAACCTTGTTCTTACTA+AGG + chr4_1:43972488-43972507 None:intergenic 35.0%
AACGAGAAAGTGAATCTGTT+AGG + chr4_1:43972630-43972649 None:intergenic 35.0%
GCAATCACACACACAAAAAA+TGG + chr4_1:43972732-43972751 None:intergenic 35.0%
!! ACTTTCAGGTTGCTTCAAAT+TGG - chr4_1:43972871-43972890 Msa0549140:intron 35.0%
TGATCCATCATTATCACTTG+AGG - chr4_1:43973150-43973169 Msa0549140:CDS 35.0%
! GATTCCTCAAGTGATAATGA+TGG + chr4_1:43973157-43973176 None:intergenic 35.0%
ATCACTTGAGGAATCACTTA+TGG - chr4_1:43973162-43973181 Msa0549140:CDS 35.0%
ATGTAAAGGGATACTTTGCA+TGG - chr4_1:43963920-43963939 Msa0549140:CDS 35.0%
! AGACAATTTTGAATGGCACA+AGG - chr4_1:43973380-43973399 Msa0549140:CDS 35.0%
! GACAATTTTGAATGGCACAA+GGG - chr4_1:43973381-43973400 Msa0549140:CDS 35.0%
AAGGGTTATACTGTGAGATT+TGG - chr4_1:43973399-43973418 Msa0549140:CDS 35.0%
AACACTGCACCATTGCAAAT+AGG - chr4_1:43961752-43961771 Msa0549140:three_prime_UTR 40.0%
TGGAAGAGGACCAAGTATAT+GGG - chr4_1:43961862-43961881 Msa0549140:CDS 40.0%
GGAAGATGTTGGAATCATGA+AGG - chr4_1:43961967-43961986 Msa0549140:CDS 40.0%
TTGCCACCAATTCATCAATG+AGG + chr4_1:43962192-43962211 None:intergenic 40.0%
TGTATCACTCACATGATGAG+AGG + chr4_1:43962395-43962414 None:intergenic 40.0%
!!! CCATTTTGACTGTAACTCCA+TGG + chr4_1:43962578-43962597 None:intergenic 40.0%
CCATGGAGTTACAGTCAAAA+TGG - chr4_1:43962575-43962594 Msa0549140:intron 40.0%
TGGTTGAATCCAAATTGCAC+CGG - chr4_1:43962638-43962657 Msa0549140:intron 40.0%
CTACAGACTTTCAGTTTGGA+TGG - chr4_1:43962846-43962865 Msa0549140:CDS 40.0%
! TTTCTTTTCCATCTAGCGCT+TGG - chr4_1:43962906-43962925 Msa0549140:intron 40.0%
GAGCAATCTAAGCAAGTCAA+AGG - chr4_1:43963147-43963166 Msa0549140:CDS 40.0%
GTACGACGATCCATCATTAT+CGG - chr4_1:43963717-43963736 Msa0549140:CDS 40.0%
GATTCCTCAACCGATAATGA+TGG + chr4_1:43963730-43963749 None:intergenic 40.0%
! AGGGCTGGTGTAAATGTAAA+GGG - chr4_1:43963907-43963926 Msa0549140:CDS 40.0%
ATACTTTGCATGGTCTCTGT+TGG - chr4_1:43963930-43963949 Msa0549140:CDS 40.0%
AGGGGTTATACTGTGAGATT+TGG - chr4_1:43963970-43963989 Msa0549140:CDS 40.0%
ATCAAAAGCTCTCAGGATTG+TGG - chr4_1:43964031-43964050 Msa0549140:intron 40.0%
AGGTTGTAAGTCGTTTCAAG+AGG + chr4_1:43964470-43964489 None:intergenic 40.0%
GACTTACAACCTAAAACCTG+AGG - chr4_1:43964478-43964497 Msa0549140:intron 40.0%
ATGTGTTGCCACATGTGATA+AGG - chr4_1:43964582-43964601 Msa0549140:intron 40.0%
AGGATCTTGAAGACACATGT+TGG + chr4_1:43964627-43964646 None:intergenic 40.0%
TATTCCTTCAATGAGGCTGA+GGG - chr4_1:43964646-43964665 Msa0549140:intron 40.0%
GTTCAGAATGTTGCAAATGC+TGG - chr4_1:43964689-43964708 Msa0549140:intron 40.0%
AAATGTTGGGTCCTCCATAA+TGG - chr4_1:43964718-43964737 Msa0549140:intron 40.0%
TATGGATGGTCGTATCAATG+CGG - chr4_1:43964745-43964764 Msa0549140:intron 40.0%
GAATGCTTAGTTGAGCAACA+AGG + chr4_1:43964805-43964824 None:intergenic 40.0%
GGCCGCAAATGAAAATGATA+TGG - chr4_1:43964930-43964949 Msa0549140:intron 40.0%
GATGTTGAAACAGATGCCTT+TGG - chr4_1:43964979-43964998 Msa0549140:intron 40.0%
CTTCTTCAGTTCAATCCCAA+AGG + chr4_1:43964998-43965017 None:intergenic 40.0%
! GTCTACTGTTGATGGAGATA+TGG - chr4_1:43965080-43965099 Msa0549140:intron 40.0%
! CTACTGTTGATGGAGATATG+GGG - chr4_1:43965082-43965101 Msa0549140:intron 40.0%
!! AGGTGTTGATGTTAGAGTTG+GGG - chr4_1:43965116-43965135 Msa0549140:intron 40.0%
TAACGACATGACCTATGAGT+TGG - chr4_1:43965186-43965205 Msa0549140:intron 40.0%
ATTCGGGTGATAATCAGACT+CGG - chr4_1:43965309-43965328 Msa0549140:intron 40.0%
CCGTTAGGAAATACGTGAAT+AGG - chr4_1:43965339-43965358 Msa0549140:intron 40.0%
GTATTAGCGTCAAAGAGCTA+AGG - chr4_1:43965382-43965401 Msa0549140:intron 40.0%
TTCATGCATCTGCTACAACA+AGG - chr4_1:43965444-43965463 Msa0549140:intron 40.0%
CATCTGCTACAACAAGGAAA+AGG - chr4_1:43965450-43965469 Msa0549140:intron 40.0%
AACCAAATGCCCATTACTTG+AGG - chr4_1:43965695-43965714 Msa0549140:intron 40.0%
CTATGTCACACCTCAAGTAA+TGG + chr4_1:43965708-43965727 None:intergenic 40.0%
TGCAAAGCCTACCTTAAACT+TGG - chr4_1:43965735-43965754 Msa0549140:intron 40.0%
!! TAAAGATGGCGGAAAGGATT+GGG + chr4_1:43965769-43965788 None:intergenic 40.0%
!! ATAAAGATGGCGGAAAGGAT+TGG + chr4_1:43965770-43965789 None:intergenic 40.0%
AATCCTTTCCGCCATCTTTA+TGG - chr4_1:43965769-43965788 Msa0549140:intron 40.0%
GTTGAGTGTGTCCATAAAGA+TGG + chr4_1:43965783-43965802 None:intergenic 40.0%
!! CTTTTTCTCCTTGTTGTGGA+AGG + chr4_1:43965806-43965825 None:intergenic 40.0%
CTTCCACAACAAGGAGAAAA+AGG - chr4_1:43965804-43965823 Msa0549140:intron 40.0%
! GTTCCTTTTTCTCCTTGTTG+TGG + chr4_1:43965810-43965829 None:intergenic 40.0%
TCTCTTGCTAATTCCTAAGG+TGG - chr4_1:43965913-43965932 Msa0549140:intron 40.0%
TGAAAATCTCCCAAGTGAAG+TGG + chr4_1:43965944-43965963 None:intergenic 40.0%
!! AGGTAGGTTGACTTGTGATA+TGG - chr4_1:43966015-43966034 Msa0549140:intron 40.0%
TAATCTCAGCCGTAATGCTA+TGG - chr4_1:43966044-43966063 Msa0549140:intron 40.0%
CTCTTTGCAAACTCTATCAC+CGG - chr4_1:43966123-43966142 Msa0549140:intron 40.0%
TCTTTGCAAACTCTATCACC+GGG - chr4_1:43966124-43966143 Msa0549140:intron 40.0%
ATTATAGGCAATGGCTTAGC+CGG + chr4_1:43966153-43966172 None:intergenic 40.0%
GAACACGCTATTATAGGCAA+TGG + chr4_1:43966162-43966181 None:intergenic 40.0%
GAGAGAGAACACGCTATTAT+AGG + chr4_1:43966168-43966187 None:intergenic 40.0%
GTAGATCCTAATCGCAAACT+TGG + chr4_1:43966260-43966279 None:intergenic 40.0%
CGATTAGGATCTACAGTTCA+AGG - chr4_1:43966266-43966285 Msa0549140:intron 40.0%
!! GGAGGCAAGCTCTAAATTTA+TGG + chr4_1:43966427-43966446 None:intergenic 40.0%
AAGAAAAGAAACCTAGGGAC+TGG - chr4_1:43966508-43966527 Msa0549140:intron 40.0%
AGAAAAGAAACCTAGGGACT+GGG - chr4_1:43966509-43966528 Msa0549140:intron 40.0%
TGACTGGGTATATTGTCTTC+TGG - chr4_1:43966552-43966571 Msa0549140:intron 40.0%
CAAGAACCTTACTGTCATTG+TGG - chr4_1:43966701-43966720 Msa0549140:intron 40.0%
TATTTGGGCAAAGAGTTTGG+GGG - chr4_1:43966781-43966800 Msa0549140:intron 40.0%
!!! GTGATGCGTGTGTGATTTTT+TGG - chr4_1:43966855-43966874 Msa0549140:intron 40.0%
AAAAAAGATGGATCGGTTGC+CGG - chr4_1:43967059-43967078 Msa0549140:intron 40.0%
GTGGAGGACCAACAATATAT+TGG + chr4_1:43967502-43967521 None:intergenic 40.0%
GATTGAAAAGTCACAACCGA+AGG - chr4_1:43967607-43967626 Msa0549140:intron 40.0%
TTGTCCATGTGATAAGGTGT+TGG + chr4_1:43968350-43968369 None:intergenic 40.0%
!!! GATTTTTTCTCTCCCTGTCT+CGG - chr4_1:43968443-43968462 Msa0549140:intron 40.0%
CAAATCATTATGACCGAGAC+AGG + chr4_1:43968459-43968478 None:intergenic 40.0%
TTTGTCTTCTTCCTTGTGGT+TGG - chr4_1:43968491-43968510 Msa0549140:intron 40.0%
AAGGAAGAAGAAGATTTGCC+TGG - chr4_1:43968892-43968911 Msa0549140:intron 40.0%
AGGAAGAAGAAGATTTGCCT+GGG - chr4_1:43968893-43968912 Msa0549140:intron 40.0%
ACGAAAAAGCCTAGTTTCAC+AGG - chr4_1:43969305-43969324 Msa0549140:intron 40.0%
CGAAAAAGCCTAGTTTCACA+GGG - chr4_1:43969306-43969325 Msa0549140:intron 40.0%
AAATTTGCCAAGCAAGAGCA+AGG - chr4_1:43969351-43969370 Msa0549140:intron 40.0%
!! TGTATGTCAGGGATTTTGAC+AGG + chr4_1:43969413-43969432 None:intergenic 40.0%
AGAAGTCGGAGTATGTAGAT+CGG + chr4_1:43969572-43969591 None:intergenic 40.0%
!! GTTCAAAGGTGTTGGTTTCA+TGG + chr4_1:43969600-43969619 None:intergenic 40.0%
! AGAGAGAAGTTCAAAGGTGT+TGG + chr4_1:43969608-43969627 None:intergenic 40.0%
!! TCGCATGGGTGTTGAAAAAT+GGG + chr4_1:43969686-43969705 None:intergenic 40.0%
! ACAAAAGTGCATAAAGCCCT+GGG + chr4_1:43969833-43969852 None:intergenic 40.0%
!! GGCTTTATGCACTTTTGTCA+AGG - chr4_1:43969835-43969854 Msa0549140:intron 40.0%
AAGGAGGAATCTATTGAGAC+AGG + chr4_1:43969919-43969938 None:intergenic 40.0%
CTGCTCCAAAAGAAAAAAGG+AGG + chr4_1:43969935-43969954 None:intergenic 40.0%
! CAAATCCCGTAGTTTGTCTT+GGG + chr4_1:43970384-43970403 None:intergenic 40.0%
TACATGTATCTTCCGCAACA+AGG + chr4_1:43970509-43970528 None:intergenic 40.0%
GGTTGTGGGTAAGATGAATA+AGG + chr4_1:43970602-43970621 None:intergenic 40.0%
! GACAACTCTCGTCTTTTCTT+GGG + chr4_1:43970626-43970645 None:intergenic 40.0%
! TGACAACTCTCGTCTTTTCT+TGG + chr4_1:43970627-43970646 None:intergenic 40.0%
GATTCAATACCCTTCTTGAC+AGG - chr4_1:43970806-43970825 Msa0549140:intron 40.0%
!! TGAAGAATTTTGGTGGGTAG+TGG + chr4_1:43971054-43971073 None:intergenic 40.0%
CGATGACAAAAACAAGGATG+CGG + chr4_1:43971197-43971216 None:intergenic 40.0%
AACACTGCACCATTGCAAAT+AGG - chr4_1:43961752-43961771 Msa0549140:three_prime_UTR 40.0%
TTCCCAGAAGGCTTCATATT+TGG - chr4_1:43971378-43971397 Msa0549140:CDS 40.0%
TGCCAAATATGAAGCCTTCT+GGG + chr4_1:43961799-43961818 None:intergenic 40.0%
TGGAAGAGGACCAAGTATAT+GGG - chr4_1:43961862-43961881 Msa0549140:CDS 40.0%
GGAAGATGTTGGTATCATGA+AGG - chr4_1:43971551-43971570 Msa0549140:CDS 40.0%
CAACAACCTCATCAATGAAC+TGG - chr4_1:43971674-43971693 Msa0549140:intron 40.0%
ATCAATGAACTGGTGGCAAA+TGG - chr4_1:43971684-43971703 Msa0549140:intron 40.0%
! GAAGTCTTTTCTGCAGTTGA+GGG + chr4_1:43971964-43971983 None:intergenic 40.0%
AGCAAAGTTCTGCATAATCC+TGG + chr4_1:43971986-43972005 None:intergenic 40.0%
CATGGACATACAGTCAAGAT+GGG - chr4_1:43972054-43972073 Msa0549140:intron 40.0%
AGTCAAGATGGGTATGCAAA+TGG - chr4_1:43972065-43972084 Msa0549140:CDS 40.0%
TGGGTATGCAAATGGTGAAA+TGG - chr4_1:43972073-43972092 Msa0549140:CDS 40.0%
TGGTTGAATCCAAATTGCAC+CGG - chr4_1:43962638-43962657 Msa0549140:intron 40.0%
GGGTGTGATAGGTATAACAT+TGG - chr4_1:43972241-43972260 Msa0549140:CDS 40.0%
CGTGCTACAGACTTTATGTT+TGG - chr4_1:43972320-43972339 Msa0549140:intron 40.0%
TGAGAGCCTTAGTAAGAACA+AGG - chr4_1:43972479-43972498 Msa0549140:intron 40.0%
GATGCACCTCAATTAAGCAA+TGG - chr4_1:43963219-43963238 Msa0549140:CDS 40.0%
GGTTTGCCATTGCTTAATTG+AGG + chr4_1:43972601-43972620 None:intergenic 40.0%
AGTGAATCTGTTAGGTAGCT+AGG + chr4_1:43972622-43972641 None:intergenic 40.0%
! GAACGTGATGGAAAAACCAT+TGG - chr4_1:43972756-43972775 Msa0549140:CDS 40.0%
AGAAAGTCTCGAATTGCTCT+TGG + chr4_1:43972909-43972928 None:intergenic 40.0%
! AGGGCTGGTGTAAATGTAAA+GGG - chr4_1:43963907-43963926 Msa0549140:CDS 40.0%
ATCAAAAGCTCTCAGGATTG+TGG - chr4_1:43964031-43964050 Msa0549140:intron 40.0%
GTGCCAAATATGAAGCCTTC+TGG + chr4_1:43961800-43961819 None:intergenic 45.0%
! TATGAAGGTGCAGCAAGTGA+AGG - chr4_1:43961839-43961858 Msa0549140:CDS 45.0%
GTGGAAGAGGACCAAGTATA+TGG - chr4_1:43961861-43961880 Msa0549140:CDS 45.0%
TGGAAACAATGGAGACGTTG+CGG - chr4_1:43961922-43961941 Msa0549140:CDS 45.0%
GCAGAAGGAAAACTAAGTGG+TGG - chr4_1:43962133-43962152 Msa0549140:CDS 45.0%
GGATAACTTTGAACGAGCCA+TGG - chr4_1:43962558-43962577 Msa0549140:intron 45.0%
TGGATATGCAAATGGCGCAA+TGG - chr4_1:43962595-43962614 Msa0549140:intron 45.0%
AACCAAGAAGAACATCGACC+TGG + chr4_1:43962623-43962642 None:intergenic 45.0%
TTGAATCCAAATTGCACCGG+TGG - chr4_1:43962641-43962660 Msa0549140:intron 45.0%
CGAGCTACAGACTTTCAGTT+TGG - chr4_1:43962842-43962861 Msa0549140:CDS 45.0%
TTTATGGATCCCTTGGCCAA+TGG - chr4_1:43963066-43963085 Msa0549140:CDS 45.0%
GGATAATCTCCATTGGCCAA+GGG + chr4_1:43963078-43963097 None:intergenic 45.0%
TGGATAATCTCCATTGGCCA+AGG + chr4_1:43963079-43963098 None:intergenic 45.0%
TCCAAAAACCATGCGAGCAT+TGG - chr4_1:43963095-43963114 Msa0549140:intron 45.0%
! ACCAATGCTCGCATGGTTTT+TGG + chr4_1:43963099-43963118 None:intergenic 45.0%
TGATCTTACCAATGCTCGCA+TGG + chr4_1:43963106-43963125 None:intergenic 45.0%
CAGAGAATCTGTTAGGTAGC+TGG + chr4_1:43963250-43963269 None:intergenic 45.0%
GCACGAGATGGAAAACCAAT+TGG - chr4_1:43963383-43963402 Msa0549140:intron 45.0%
! CGATCCATCATTATCGGTTG+AGG - chr4_1:43963723-43963742 Msa0549140:CDS 45.0%
CTTTCAATGAAATGCAGGGC+TGG - chr4_1:43963892-43963911 Msa0549140:CDS 45.0%
! CAGGGCTGGTGTAAATGTAA+AGG - chr4_1:43963906-43963925 Msa0549140:CDS 45.0%
! AGTGGCAGATTGTTTTCCTC+AGG + chr4_1:43964497-43964516 None:intergenic 45.0%
CCTATACGCCTTATCACATG+TGG + chr4_1:43964593-43964612 None:intergenic 45.0%
CCACATGTGATAAGGCGTAT+AGG - chr4_1:43964590-43964609 Msa0549140:intron 45.0%
CTCAGCCTCATTGAAGGAAT+AGG + chr4_1:43964647-43964666 None:intergenic 45.0%
CTATTCCTTCAATGAGGCTG+AGG - chr4_1:43964645-43964664 Msa0549140:intron 45.0%
CTCAACTAAGCATTCTCACG+AGG - chr4_1:43964810-43964829 Msa0549140:intron 45.0%
!! GGTGTTGATGTTAGAGTTGG+GGG - chr4_1:43965117-43965136 Msa0549140:intron 45.0%
! GTGTTGATGTTAGAGTTGGG+GGG - chr4_1:43965118-43965137 Msa0549140:intron 45.0%
TCTTCAGCACACCAACTCAT+AGG + chr4_1:43965200-43965219 None:intergenic 45.0%
!! CACCTCAAGTAATGGGCATT+TGG + chr4_1:43965700-43965719 None:intergenic 45.0%
!! GGGGGAGTATTCCAAGTTTA+AGG + chr4_1:43965749-43965768 None:intergenic 45.0%
!! AAAGATGGCGGAAAGGATTG+GGG + chr4_1:43965768-43965787 None:intergenic 45.0%
!! TGTCCATAAAGATGGCGGAA+AGG + chr4_1:43965775-43965794 None:intergenic 45.0%
GAGTGTGTCCATAAAGATGG+CGG + chr4_1:43965780-43965799 None:intergenic 45.0%
TTCACCTCATCTCGCTTCTA+AGG - chr4_1:43965960-43965979 Msa0549140:intron 45.0%
!! GCTTCTAAGGTCTCTCAACA+AGG - chr4_1:43965973-43965992 Msa0549140:intron 45.0%
! TCTAAGGTCTCTCAACAAGG+TGG - chr4_1:43965976-43965995 Msa0549140:intron 45.0%
! CAAGGTGGTTGCGAAAGTTT+TGG - chr4_1:43965991-43966010 Msa0549140:intron 45.0%
!! TTGCGAAAGTTTTGGCAGGT+AGG - chr4_1:43965999-43966018 Msa0549140:intron 45.0%
GTTTGCAAAGAGAGTGACGT+GGG + chr4_1:43966115-43966134 None:intergenic 45.0%
AGTTTGCAAAGAGAGTGACG+TGG + chr4_1:43966116-43966135 None:intergenic 45.0%
AAACTCTATCACCGGGTAAC+CGG - chr4_1:43966131-43966150 Msa0549140:intron 45.0%
AGACAGTGGGAACAGGTATT+GGG + chr4_1:43966216-43966235 None:intergenic 45.0%
AAGACAGTGGGAACAGGTAT+TGG + chr4_1:43966217-43966236 None:intergenic 45.0%
ACAAAGAAGACAGTGGGAAC+AGG + chr4_1:43966223-43966242 None:intergenic 45.0%
GTTTCTATTTCCCAGTCCCT+AGG + chr4_1:43966522-43966541 None:intergenic 45.0%
GGGACTGGGAAATAGAAACT+TGG - chr4_1:43966523-43966542 Msa0549140:intron 45.0%
TTGGTTAACAATGGCATGCC+TGG - chr4_1:43966874-43966893 Msa0549140:intron 45.0%
!! GCTAAGAGAGAGTGTTAGAG+CGG - chr4_1:43967131-43967150 Msa0549140:intron 45.0%
GAAAAGTCACAACCGAAGGT+TGG - chr4_1:43967611-43967630 Msa0549140:intron 45.0%
! TTCCTTTTACGTGCATGCCA+CGG - chr4_1:43967769-43967788 Msa0549140:intron 45.0%
TTGTCAAACGAAGATGACCG+TGG + chr4_1:43967789-43967808 None:intergenic 45.0%
GCATCCAACACCTTATCACA+TGG - chr4_1:43968343-43968362 Msa0549140:intron 45.0%
! AGCATGTTTTGCCAACCACA+AGG + chr4_1:43968505-43968524 None:intergenic 45.0%
GTAGATAGCCCTGTGAAACT+AGG + chr4_1:43969317-43969336 None:intergenic 45.0%
TTTCACAGGGCTATCTACCA+GGG - chr4_1:43969319-43969338 Msa0549140:intron 45.0%
! AACCCCTGGCAAATTTTACG+AGG - chr4_1:43969382-43969401 Msa0549140:intron 45.0%
! ACCCCTGGCAAATTTTACGA+GGG - chr4_1:43969383-43969402 Msa0549140:intron 45.0%
ACCCCTCGTAAAATTTGCCA+GGG + chr4_1:43969388-43969407 None:intergenic 45.0%
TACCCCTCGTAAAATTTGCC+AGG + chr4_1:43969389-43969408 None:intergenic 45.0%
GGAGGAAGAGAGAAGTTCAA+AGG + chr4_1:43969614-43969633 None:intergenic 45.0%
!! TTGGGTGGTTTTTGAAGAGG+AGG + chr4_1:43969632-43969651 None:intergenic 45.0%
!! CGCATGGGTGTTGAAAAATG+GGG + chr4_1:43969685-43969704 None:intergenic 45.0%
!! CTCGCATGGGTGTTGAAAAA+TGG + chr4_1:43969687-43969706 None:intergenic 45.0%
!! CATTTTTCAACACCCATGCG+AGG - chr4_1:43969685-43969704 Msa0549140:intron 45.0%
AACCCCTCGAAAACTTGTGA+GGG + chr4_1:43969731-43969750 None:intergenic 45.0%
AAACCCCTCGAAAACTTGTG+AGG + chr4_1:43969732-43969751 None:intergenic 45.0%
!! AGTTTTCGAGGGGTTTAACC+TGG - chr4_1:43969736-43969755 Msa0549140:intron 45.0%
TGGGAAACTGACGTTTGACA+GGG + chr4_1:43969814-43969833 None:intergenic 45.0%
TGTCAAACGTCAGTTTCCCA+GGG - chr4_1:43969814-43969833 Msa0549140:intron 45.0%
! GACAAAAGTGCATAAAGCCC+TGG + chr4_1:43969834-43969853 None:intergenic 45.0%
CGGTATCCCAAGACAAACTA+CGG - chr4_1:43970375-43970394 Msa0549140:intron 45.0%
GGTATCCCAAGACAAACTAC+GGG - chr4_1:43970376-43970395 Msa0549140:intron 45.0%
! GCAAATCCCGTAGTTTGTCT+TGG + chr4_1:43970385-43970404 None:intergenic 45.0%
! GTCTTTTCTTGGGAGGTTGT+GGG + chr4_1:43970616-43970635 None:intergenic 45.0%
! AACTCTCGTCTTTTCTTGGG+AGG + chr4_1:43970623-43970642 None:intergenic 45.0%
GTGCCAAATATGAAGCCTTC+TGG + chr4_1:43961800-43961819 None:intergenic 45.0%
! TATGAAGGTGCAGCAAGTGA+AGG - chr4_1:43961839-43961858 Msa0549140:CDS 45.0%
GTGGAAGAGGACCAAGTATA+TGG - chr4_1:43961861-43961880 Msa0549140:CDS 45.0%
! TGGTCTAGAATACTCCCAGA+TGG - chr4_1:43971609-43971628 Msa0549140:intron 45.0%
! GGTCTAGAATACTCCCAGAT+GGG - chr4_1:43971610-43971629 Msa0549140:intron 45.0%
CTCCACTTAGTTTCCCATCT+GGG + chr4_1:43971626-43971645 None:intergenic 45.0%
CAACCTCATCAATGAACTGG+TGG - chr4_1:43971677-43971696 Msa0549140:intron 45.0%
TTGCCACCAGTTCATTGATG+AGG + chr4_1:43971683-43971702 None:intergenic 45.0%
! GGAAGTCTTTTCTGCAGTTG+AGG + chr4_1:43971965-43971984 None:intergenic 45.0%
CAACTGCAGAAAAGACTTCC+AGG - chr4_1:43971965-43971984 Msa0549140:intron 45.0%
CCATCTTGACTGTATGTCCA+TGG + chr4_1:43972056-43972075 None:intergenic 45.0%
CCATGGACATACAGTCAAGA+TGG - chr4_1:43972053-43972072 Msa0549140:intron 45.0%
TTGAATCCAAATTGCACCGG+TGG - chr4_1:43962641-43962660 Msa0549140:intron 45.0%
! GTCTCTCAAAAGGGTGTGAT+AGG - chr4_1:43972230-43972249 Msa0549140:CDS 45.0%
TTTATGGATCCCTTGGCCAA+TGG - chr4_1:43963066-43963085 Msa0549140:CDS 45.0%
GGATAATCTCCATTGGCCAA+GGG + chr4_1:43963078-43963097 None:intergenic 45.0%
AGGATAATCTCCATTGGCCA+AGG + chr4_1:43972452-43972471 None:intergenic 45.0%
GTGATTGCAGTTGAACGTGA+TGG - chr4_1:43972744-43972763 Msa0549140:CDS 45.0%
! CAGGGCTGGTGTAAATGTAA+AGG - chr4_1:43963906-43963925 Msa0549140:CDS 45.0%
!!! TTACTTTTTTTTTTTTTTTT+TGG - chr4_1:43963443-43963462 Msa0549140:intron 5.0%
CACCAGGTCGATGTTCTTCT+TGG - chr4_1:43962618-43962637 Msa0549140:intron 50.0%
GAATCACCACCGGTGCAATT+TGG + chr4_1:43962650-43962669 None:intergenic 50.0%
! AATTGCACCGGTGGTGATTC+TGG - chr4_1:43962650-43962669 Msa0549140:intron 50.0%
TTCGGTTCCAGAATCACCAC+CGG + chr4_1:43962660-43962679 None:intergenic 50.0%
! AGTGACGCAGTCAGAAGTGT+AGG + chr4_1:43962935-43962954 None:intergenic 50.0%
GTGGCAACACATCTCCTCAA+AGG + chr4_1:43964574-43964593 None:intergenic 50.0%
CTTCAATGAGGCTGAGGGAA+GGG - chr4_1:43964651-43964670 Msa0549140:intron 50.0%
CTGAGGGAAGGGACTATGAA+TGG - chr4_1:43964662-43964681 Msa0549140:intron 50.0%
AGGCCAAGTAAGCCTTGCTT+GGG - chr4_1:43964830-43964849 Msa0549140:intron 50.0%
AGACCCAAGCAAGGCTTACT+TGG + chr4_1:43964836-43964855 None:intergenic 50.0%
! TGGAAGCATAGACCCAAGCA+AGG + chr4_1:43964845-43964864 None:intergenic 50.0%
!! AAGATGGCGGAAAGGATTGG+GGG + chr4_1:43965767-43965786 None:intergenic 50.0%
CACTCAACCCTTCCACAACA+AGG - chr4_1:43965795-43965814 Msa0549140:intron 50.0%
GATGTTAGATGGTCTCCCTG+CGG - chr4_1:43965830-43965849 Msa0549140:intron 50.0%
ATGTTAGATGGTCTCCCTGC+GGG - chr4_1:43965831-43965850 Msa0549140:intron 50.0%
TGCTCAAACATAACCCCGCA+GGG + chr4_1:43965848-43965867 None:intergenic 50.0%
TTGCTCAAACATAACCCCGC+AGG + chr4_1:43965849-43965868 None:intergenic 50.0%
TGAAGTGGAGAGTCCACCTT+AGG + chr4_1:43965929-43965948 None:intergenic 50.0%
GTGGACTCTCCACTTCACTT+GGG - chr4_1:43965932-43965951 Msa0549140:intron 50.0%
GAGACCTTAGAAGCGAGATG+AGG + chr4_1:43965967-43965986 None:intergenic 50.0%
!! GTGGTTGCGAAAGTTTTGGC+AGG - chr4_1:43965995-43966014 Msa0549140:intron 50.0%
GTTCTCTCTCTTCTGCCATC+TGG - chr4_1:43966178-43966197 Msa0549140:intron 50.0%
TCTCTCTTCTGCCATCTGGA+AGG - chr4_1:43966182-43966201 Msa0549140:intron 50.0%
GGGTGAGAAAACCTTCCAGA+TGG + chr4_1:43966196-43966215 None:intergenic 50.0%
!! ATCGCAAACTTGGTGCTGGT+AGG + chr4_1:43966250-43966269 None:intergenic 50.0%
!! CCTAATCGCAAACTTGGTGC+TGG + chr4_1:43966254-43966273 None:intergenic 50.0%
CCAGCACCAAGTTTGCGATT+AGG - chr4_1:43966251-43966270 Msa0549140:intron 50.0%
ACAATGGCATGCCTGGTTAG+AGG - chr4_1:43966881-43966900 Msa0549140:intron 50.0%
! CTTAGCTAAGGCGGCTTTGT+CGG - chr4_1:43966945-43966964 Msa0549140:intron 50.0%
GGAAGTAGGGAACCAACCTT+CGG + chr4_1:43967626-43967645 None:intergenic 50.0%
AAGATTTGCCTGGGCAACGA+TGG - chr4_1:43968902-43968921 Msa0549140:intron 50.0%
CAATTGAACCATCGTTGCCC+AGG + chr4_1:43968913-43968932 None:intergenic 50.0%
CTGGGCAACGATGGTTCAAT+TGG - chr4_1:43968911-43968930 Msa0549140:intron 50.0%
GGTAGGGCCACAACAACTAA+TGG - chr4_1:43968938-43968957 Msa0549140:intron 50.0%
GTTTCACAGGGCTATCTACC+AGG - chr4_1:43969318-43969337 Msa0549140:intron 50.0%
TTCACAGGGCTATCTACCAG+GGG - chr4_1:43969320-43969339 Msa0549140:intron 50.0%
AATTTGCCAGGGGTTTGCCA+AGG + chr4_1:43969377-43969396 None:intergenic 50.0%
CCCCTCGTAAAATTTGCCAG+GGG + chr4_1:43969387-43969406 None:intergenic 50.0%
! CCCCTGGCAAATTTTACGAG+GGG - chr4_1:43969384-43969403 Msa0549140:intron 50.0%
!! GGTTGTGGTGGTGCTTTTGA+TGG + chr4_1:43969532-43969551 None:intergenic 50.0%
ATGTAGATCGGTCACCGTGA+AGG + chr4_1:43969560-43969579 None:intergenic 50.0%
CGAAAACTTGTGAGGGGCAA+AGG + chr4_1:43969724-43969743 None:intergenic 50.0%
! TTGCCCCTCACAAGTTTTCG+AGG - chr4_1:43969724-43969743 Msa0549140:intron 50.0%
! TGCCCCTCACAAGTTTTCGA+GGG - chr4_1:43969725-43969744 Msa0549140:intron 50.0%
ACCCCTCGAAAACTTGTGAG+GGG + chr4_1:43969730-43969749 None:intergenic 50.0%
! TTGCGATGACCTGTTTTGCC+AGG - chr4_1:43969768-43969787 Msa0549140:intron 50.0%
! TGCGATGACCTGTTTTGCCA+GGG - chr4_1:43969769-43969788 Msa0549140:intron 50.0%
! TTTGACAGGGGTTTTGCCAG+GGG + chr4_1:43969801-43969820 None:intergenic 50.0%
! GTTTGACAGGGGTTTTGCCA+GGG + chr4_1:43969802-43969821 None:intergenic 50.0%
GGGAAACTGACGTTTGACAG+GGG + chr4_1:43969813-43969832 None:intergenic 50.0%
CTGGGAAACTGACGTTTGAC+AGG + chr4_1:43969815-43969834 None:intergenic 50.0%
CTGTCAAACGTCAGTTTCCC+AGG - chr4_1:43969813-43969832 Msa0549140:intron 50.0%
! CGTCTTTTCTTGGGAGGTTG+TGG + chr4_1:43970617-43970636 None:intergenic 50.0%
CTCCCAGATGGGAAACTAAG+TGG - chr4_1:43971621-43971640 Msa0549140:intron 50.0%
CCTCCACTTAGTTTCCCATC+TGG + chr4_1:43971627-43971646 None:intergenic 50.0%
CCAGATGGGAAACTAAGTGG+AGG - chr4_1:43971624-43971643 Msa0549140:intron 50.0%
GCAAATGGTGAAATGGCACC+AGG - chr4_1:43972080-43972099 Msa0549140:CDS 50.0%
!! AACCAAGAAGAGCATCGACC+TGG + chr4_1:43972101-43972120 None:intergenic 50.0%
GAATCACCACCGGTGCAATT+TGG + chr4_1:43962650-43962669 None:intergenic 50.0%
! AATTGCACCGGTGGTGATTC+TGG - chr4_1:43962650-43962669 Msa0549140:intron 50.0%
TTCGGTTCCAGAATCACCAC+CGG + chr4_1:43962660-43962679 None:intergenic 50.0%
!! ACTTCTAGCTCATGCAGCAG+TGG - chr4_1:43972181-43972200 Msa0549140:CDS 50.0%
! GAGCAATCAAGGCTAGTCAG+TGG - chr4_1:43972520-43972539 Msa0549140:intron 50.0%
! GAAGGTGCAGCAAGTGAAGG+TGG - chr4_1:43961842-43961861 Msa0549140:CDS 55.0%
GCAGCAAGTGAAGGTGGAAG+AGG - chr4_1:43961848-43961867 Msa0549140:CDS 55.0%
GTAGGCTACCAAGCGCTAGA+TGG + chr4_1:43962917-43962936 None:intergenic 55.0%
GTGATTGCAGTCGCACGAGA+TGG - chr4_1:43963371-43963390 Msa0549140:intron 55.0%
CCTTCCCTCAGCCTCATTGA+AGG + chr4_1:43964653-43964672 None:intergenic 55.0%
CCTTCAATGAGGCTGAGGGA+AGG - chr4_1:43964650-43964669 Msa0549140:intron 55.0%
GAGGCCAAGTAAGCCTTGCT+TGG - chr4_1:43964829-43964848 Msa0549140:intron 55.0%
AGACTCGGATGCTTCCCGTT+AGG - chr4_1:43965324-43965343 Msa0549140:intron 55.0%
TGTTAGATGGTCTCCCTGCG+GGG - chr4_1:43965832-43965851 Msa0549140:intron 55.0%
! GGTGGACTCTCCACTTCACT+TGG - chr4_1:43965931-43965950 Msa0549140:intron 55.0%
CAATGGCTTAGCCGGTTACC+CGG + chr4_1:43966145-43966164 None:intergenic 55.0%
! ATGGATCGGTTGCCGGTTAG+AGG - chr4_1:43967066-43967085 Msa0549140:intron 55.0%
GACCGTGGCATGCACGTAAA+AGG + chr4_1:43967774-43967793 None:intergenic 55.0%
GCAAATTTGCCAGTTGCCCC+TGG + chr4_1:43969339-43969358 None:intergenic 55.0%
AGATCGGTCACCGTGAAGGT+GGG + chr4_1:43969556-43969575 None:intergenic 55.0%
TAGATCGGTCACCGTGAAGG+TGG + chr4_1:43969557-43969576 None:intergenic 55.0%
CCTGGCAAAAGTCCTCGCAT+GGG + chr4_1:43969700-43969719 None:intergenic 55.0%
! CCATGCGAGGACTTTTGCCA+GGG - chr4_1:43969698-43969717 Msa0549140:intron 55.0%
!! GCCCCTCACAAGTTTTCGAG+GGG - chr4_1:43969726-43969745 Msa0549140:intron 55.0%
GGCAGAATCCCTGGCAAAAC+AGG + chr4_1:43969780-43969799 None:intergenic 55.0%
! CGTTTGACAGGGGTTTTGCC+AGG + chr4_1:43969803-43969822 None:intergenic 55.0%
! GAAGGTGCAGCAAGTGAAGG+TGG - chr4_1:43961842-43961861 Msa0549140:CDS 55.0%
GCAGCAAGTGAAGGTGGAAG+AGG - chr4_1:43961848-43961867 Msa0549140:CDS 55.0%
CACCAGGTCGATGCTCTTCT+TGG - chr4_1:43972096-43972115 Msa0549140:CDS 55.0%
GCAAATGGCGCAATGGCACC+AGG - chr4_1:43962602-43962621 Msa0549140:intron 60.0%
GGCTATCTACCAGGGGCAAC+TGG - chr4_1:43969327-43969346 Msa0549140:intron 60.0%
GCCAAGCAAGAGCAAGGCCT+TGG - chr4_1:43969357-43969376 Msa0549140:intron 60.0%
GCCAAGGCCTTGCTCTTGCT+TGG + chr4_1:43969361-43969380 None:intergenic 60.0%
ACCACAACCGCCCACCTTCA+CGG - chr4_1:43969543-43969562 Msa0549140:intron 60.0%
! CCCATGCGAGGACTTTTGCC+AGG - chr4_1:43969697-43969716 Msa0549140:intron 60.0%
CCCTGGCAAAAGTCCTCGCA+TGG + chr4_1:43969701-43969720 None:intergenic 60.0%
TTTGCCAGGGATTCTGCCCC+TGG - chr4_1:43969782-43969801 Msa0549140:intron 60.0%
TTTGCCAGGGGCAGAATCCC+TGG + chr4_1:43969789-43969808 None:intergenic 60.0%
GCAAGGCCTTGGCAAACCCC+TGG - chr4_1:43969368-43969387 Msa0549140:intron 65.0%
GTGAAGGTGGGCGGTTGTGG+TGG + chr4_1:43969544-43969563 None:intergenic 65.0%
ACCGTGAAGGTGGGCGGTTG+TGG + chr4_1:43969547-43969566 None:intergenic 65.0%
TCGGTCACCGTGAAGGTGGG+CGG + chr4_1:43969553-43969572 None:intergenic 65.0%
CTTGTGAGGGGCAAAGGCCC+TGG + chr4_1:43969718-43969737 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 43961659 43973670 43961659 ID=Msa0549140;Name=Msa0549140
chr4_1 mRNA 43961659 43973670 43961659 ID=Msa0549140-mRNA-1;Parent=Msa0549140;Name=Msa0549140-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.63|0.55|1|0.68|0.6|20|134|919
chr4_1 exon 43961659 43961991 43961659 ID=Msa0549140-mRNA-1:exon:11363;Parent=Msa0549140-mRNA-1
chr4_1 exon 43962087 43962195 43962087 ID=Msa0549140-mRNA-1:exon:11362;Parent=Msa0549140-mRNA-1
chr4_1 exon 43962348 43962450 43962348 ID=Msa0549140-mRNA-1:exon:11361;Parent=Msa0549140-mRNA-1
chr4_1 exon 43962544 43962575 43962544 ID=Msa0549140-mRNA-1:exon:11360;Parent=Msa0549140-mRNA-1
chr4_1 exon 43962674 43962891 43962674 ID=Msa0549140-mRNA-1:exon:11359;Parent=Msa0549140-mRNA-1
chr4_1 exon 43962993 43963111 43962993 ID=Msa0549140-mRNA-1:exon:11358;Parent=Msa0549140-mRNA-1
chr4_1 exon 43963127 43963355 43963127 ID=Msa0549140-mRNA-1:exon:11357;Parent=Msa0549140-mRNA-1
chr4_1 exon 43963449 43963536 43963449 ID=Msa0549140-mRNA-1:exon:11356;Parent=Msa0549140-mRNA-1
chr4_1 exon 43963624 43963756 43963624 ID=Msa0549140-mRNA-1:exon:11355;Parent=Msa0549140-mRNA-1
chr4_1 exon 43963772 43964010 43963772 ID=Msa0549140-mRNA-1:exon:11354;Parent=Msa0549140-mRNA-1
chr4_1 exon 43971311 43971420 43971311 ID=Msa0549140-mRNA-1:exon:11353;Parent=Msa0549140-mRNA-1
chr4_1 exon 43971514 43971622 43971514 ID=Msa0549140-mRNA-1:exon:11352;Parent=Msa0549140-mRNA-1
chr4_1 exon 43971709 43971811 43971709 ID=Msa0549140-mRNA-1:exon:11351;Parent=Msa0549140-mRNA-1
chr4_1 exon 43971917 43971948 43971917 ID=Msa0549140-mRNA-1:exon:11350;Parent=Msa0549140-mRNA-1
chr4_1 exon 43972056 43972264 43972056 ID=Msa0549140-mRNA-1:exon:11349;Parent=Msa0549140-mRNA-1
chr4_1 exon 43972585 43972833 43972585 ID=Msa0549140-mRNA-1:exon:11348;Parent=Msa0549140-mRNA-1
chr4_1 exon 43972927 43973014 43972927 ID=Msa0549140-mRNA-1:exon:11347;Parent=Msa0549140-mRNA-1
chr4_1 exon 43973115 43973192 43973115 ID=Msa0549140-mRNA-1:exon:11346;Parent=Msa0549140-mRNA-1
chr4_1 exon 43973286 43973483 43973286 ID=Msa0549140-mRNA-1:exon:11345;Parent=Msa0549140-mRNA-1
chr4_1 exon 43973556 43973670 43973556 ID=Msa0549140-mRNA-1:exon:11344;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43973556 43973670 43973556 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43973286 43973483 43973286 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43973115 43973192 43973115 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43972927 43973014 43972927 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43972585 43972833 43972585 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43972056 43972264 43972056 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43971917 43971948 43971917 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43971709 43971811 43971709 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43971514 43971622 43971514 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43971311 43971420 43971311 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43963772 43964010 43963772 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43963624 43963756 43963624 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43963449 43963536 43963449 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43963127 43963355 43963127 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43962993 43963111 43962993 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43962674 43962891 43962674 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43962544 43962575 43962544 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43962348 43962450 43962348 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43962087 43962195 43962087 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 CDS 43961793 43961991 43961793 ID=Msa0549140-mRNA-1:cds;Parent=Msa0549140-mRNA-1
chr4_1 three_prime_UTR 43961659 43961792 43961659 ID=Msa0549140-mRNA-1:three_prime_utr;Parent=Msa0549140-mRNA-1
Gene Sequence

>Msa0549140

ATGACATTAAGCATGAGATATCTCCTATTTTCTCTATTGTTGTCTTTAGCTTCAACATTCATCATTACTTTAACAGAAGGTCAAGAAATAATTAACACTGCACCATTGCAAATAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACTTTCACTCATAGATATCCTCAAAAGATCAGTGATGGAAACAATGGAGACGTTGCGGTTGACTCGTATCATCGATATAAGGAAGATGTTGGAATCATGAAGGATATGAATTTGGATGCATATAGATTTTCCATATCTTGGTCTAGAATACTCCCAAAAGGAAAACTAAGTGGTGGAATTAATCAAGAAGGAATTGACTATTACAATAACCTCATTGATGAATTGGTGGCAAATGGTTTACAACCATTTGTAACTCTTTTTCATTGGGATCTTCCTCAATCTCTAGAAGATGAATATGGCGGTTTCTTAAGTCCTCTCATCATAAAAGACTTTCAAAACTACGCGGAACTTTGCTTTAAAACATTTGGAGATAGAGTAAAACATTGGATAACTTTGAACGAGCCATGGAGTTACAGTCAAAATGGATATGCAAATGGCGCAATGGCACCAGGTCGATGTTCTTCTTGGTTGAATCCAAATTGCACCGGTGGTGATTCTGGAACCGAACCTTATTTAACTGCACACTATCAACTTCTAGCACATGCAGCAGCTGTTAATGTCTACAAGACCAAGTTTATGGATCCCTTGGCCAATGGAGATTATCCAAAAACCATGCGAGCATTGGTAAGATCACGATTACCAAAGTTTACTAAAGAGCAATCTAAGCAAGTCAAAGGTTCATTTGATTTTATTGGCATAAACTACTACTCTTCTTGCTATGTTTCTGATGCACCTCAATTAAGCAATGCAAATTCCAGCTACCTAACAGATTCTCTGTCTATCGCACGAGATGGAAAACCAATTGGTCTAAATGTTGCTTCAGAATGGTTGTATGTTTATCCAAGAGGAATTCGAGACTTTTTGATATACGCTAAAGAAAAATACAACAATCCATTAATTTATATTACTGAAAACGGTATAAATGAGTACGACGATCCATCATTATCGGTTGAGGAATCTCTTTTAGATATTTATAGAATCGATTATCATTACCGTCATCTCTTTTATCTTAAAGAGGCAATCATGGCTGGTGTAAATGTAAAGGGATACTTTGCATGGTCTCTGTTGGATAATTTTGAATGGCACAGGGGTTATACTGTGAGATTTGGAATGATTTTCATAGATTACAAAGATGAAGGTCAAGAAATAATTAACACTGCACCATTGCAAATAGGTTCATTGAATAGAAATGATTTCCCAGAAGGCTTCATATTTGGCACAGCATCTTCTGCATATCAGTATGAAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACTTTCACTCATAGATATCCTCAAAAAATCAGTGATGGAAACAACGGAGACGTTGCAGTTGATTCATATCATCGATATAAGGAAGATGATATGAACTTGGATGCTTACAGATTTTCCATATCTTGGTCTAGAATACTCCCAGATGGGAAACTAAGTGGAGGAATTAATCAAGAAGGAATCGACTATTACAACAACCTCATCAATGAACTGGTGGCAAATGGCTTACAACCATTTGTAACTCTTTTTCATTGGGATCTTCCTCAAACTCTAGAAGATGAATATGGCGGTTTCTTAAGCCCTCTCATCATAAAAGACTTCCAGGATTATGCAGAACTTTGCTTCAAAACATTTGGAGATAGAGTAAAACATTGGATAACTTTGAATGAACCATGGACATACAGTCAAGATGGGTATGCAAATGGTGAAATGGCACCAGGTCGATGCTCTTCTTGGTTGAATCCAAATTGCACCGGTGGTGATTCTGGAACCGAACCATATTTAGTTGCACATTATCAACTTCTAGCTCATGCAGCAGTGACCAAATATCAAGTCTCTCAAAAGGGTGTGATAGGTATAACATTGGTCATAAACTATTTTGTGCCACTCTCAGATAACAAACTTGATATAAAGGCTGCTGAACGTGCTACAGACTTTATGTTTATGGATCCCTTGGCCAATGGAGATTATCCTAAAAACATGAGAGCCTTAGTAAGAACAAGGTTACCAAAGTTTACAAAAGAGCAATCAAGGCTAGTCAGTGGTTCATTTGATTTCATTGGCATAAATTACTACTCTTCATGTTATGCTTCTGATGCACCTCAATTAAGCAATGGCAAACCTAGCTACCTAACAGATTCACTTTCTCGTTTTTCATTTGAACGTGATGGAAAAACCATTGGTCTAAATGTTGCTTCAAATTGGTTGTATGTTTATCCAAGAGCAATTCGAGACTTTCTGATACAAGTTAAAGAAAAATACAACAACCCTTTAATTTATATTACTGAAAATGGTATTAATGAGTACGATGATCCATCATTATCACTTGAGGAATCACTTATGGATACTTATAGAGTTGATTATCATTATCGTCATTTATTCTATCTTAATGAGGCAATCAAGGCTGGTGTAAATGTAAAGGGATACTTTGCATGGTCTTTGTTAGACAATTTTGAATGGCACAAGGGTTATACTGTGAGATTTGGAATGACCTTTGTAGATTACAAAAATGGTTTGAAAAGATATCAAAAGCTCTCAGGATTGTGGTTCAAGAATTTCCTTTCATCAGACAACAAAAAAGTTTACATAGACTCCATTTAA
Protein sequence

>Msa0549140

MTLSMRYLLFSLLLSLASTFIITLTEGQEIINTAPLQIGAASEGGRGPSIWDTFTHRYPQKISDGNNGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRILPKGKLSGGINQEGIDYYNNLIDELVANGLQPFVTLFHWDLPQSLEDEYGGFLSPLIIKDFQNYAELCFKTFGDRVKHWITLNEPWSYSQNGYANGAMAPGRCSSWLNPNCTGGDSGTEPYLTAHYQLLAHAAAVNVYKTKFMDPLANGDYPKTMRALVRSRLPKFTKEQSKQVKGSFDFIGINYYSSCYVSDAPQLSNANSSYLTDSLSIARDGKPIGLNVASEWLYVYPRGIRDFLIYAKEKYNNPLIYITENGINEYDDPSLSVEESLLDIYRIDYHYRHLFYLKEAIMAGVNVKGYFAWSLLDNFEWHRGYTVRFGMIFIDYKDEGQEIINTAPLQIGSLNRNDFPEGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPQKISDGNNGDVAVDSYHRYKEDDMNLDAYRFSISWSRILPDGKLSGGINQEGIDYYNNLINELVANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKHWITLNEPWTYSQDGYANGEMAPGRCSSWLNPNCTGGDSGTEPYLVAHYQLLAHAAVTKYQVSQKGVIGITLVINYFVPLSDNKLDIKAAERATDFMFMDPLANGDYPKNMRALVRTRLPKFTKEQSRLVSGSFDFIGINYYSSCYASDAPQLSNGKPSYLTDSLSRFSFERDGKTIGLNVASNWLYVYPRAIRDFLIQVKEKYNNPLIYITENGINEYDDPSLSLEESLMDTYRVDYHYRHLFYLNEAIKAGVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFKNFLSSDNKKVYIDSI*