Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584600 | KEH29628.1 | 96.364 | 110 | 4 | 0 | 1 | 110 | 1 | 110 | 3.70e-68 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584600 | A0A072UKK4 | 96.364 | 110 | 4 | 0 | 1 | 110 | 1 | 110 | 1.77e-68 | 210 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0584600 | 0.800789 | 1.221973e-48 | -8.615850e-47 |
| Msa0004480 | Msa0584600 | 0.841752 | 3.926196e-58 | -8.615850e-47 |
| Msa0005260 | Msa0584600 | 0.816656 | 4.941392e-52 | -8.615850e-47 |
| Msa0006060 | Msa0584600 | 0.806122 | 9.587108e-50 | -8.615850e-47 |
| Msa0011050 | Msa0584600 | 0.870683 | 1.212329e-66 | -8.615850e-47 |
| Msa0043850 | Msa0584600 | 0.810948 | 8.939958e-51 | -8.615850e-47 |
| Msa0048390 | Msa0584600 | 0.838716 | 2.437620e-57 | -8.615850e-47 |
| Msa0048400 | Msa0584600 | 0.806717 | 7.184337e-50 | -8.615850e-47 |
| Msa0059900 | Msa0584600 | 0.808726 | 2.688064e-50 | -8.615850e-47 |
| Msa0060070 | Msa0584600 | 0.837245 | 5.822532e-57 | -8.615850e-47 |
| Msa0077370 | Msa0584600 | 0.808477 | 3.038811e-50 | -8.615850e-47 |
| Msa0082420 | Msa0584600 | 0.806465 | 8.120046e-50 | -8.615850e-47 |
| Msa0090380 | Msa0584600 | 0.860107 | 2.599911e-63 | -8.615850e-47 |
| Msa0094710 | Msa0584600 | 0.842138 | 3.104785e-58 | -8.615850e-47 |
| Msa0104760 | Msa0584600 | 0.807707 | 4.432919e-50 | -8.615850e-47 |
| Msa0104810 | Msa0584600 | 0.847633 | 1.021943e-59 | -8.615850e-47 |
| Msa0136630 | Msa0584600 | 0.803548 | 3.308225e-49 | -8.615850e-47 |
| Msa0137860 | Msa0584600 | 0.859512 | 3.930963e-63 | -8.615850e-47 |
| Msa0137980 | Msa0584600 | 0.811059 | 8.459131e-51 | -8.615850e-47 |
| Msa0138900 | Msa0584600 | 0.822332 | 2.506999e-53 | -8.615850e-47 |
| Msa0147790 | Msa0584600 | 0.807459 | 5.003804e-50 | -8.615850e-47 |
| Msa0151220 | Msa0584600 | 0.866980 | 1.917368e-65 | -8.615850e-47 |
| Msa0152560 | Msa0584600 | 0.800219 | 1.596912e-48 | -8.615850e-47 |
| Msa0155210 | Msa0584600 | 0.806473 | 8.087077e-50 | -8.615850e-47 |
| Msa0170770 | Msa0584600 | 0.823559 | 1.298026e-53 | -8.615850e-47 |
| Msa0176260 | Msa0584600 | 0.847845 | 8.937654e-60 | -8.615850e-47 |
| Msa0187310 | Msa0584600 | 0.805799 | 1.121153e-49 | -8.615850e-47 |
| Msa0196880 | Msa0584600 | 0.818342 | 2.061283e-52 | -8.615850e-47 |
| Msa0223140 | Msa0584600 | 0.868269 | 7.404785e-66 | -8.615850e-47 |
| Msa0224130 | Msa0584600 | 0.827745 | 1.320403e-54 | -8.615850e-47 |
| Msa0225850 | Msa0584600 | 0.840277 | 9.582025e-58 | -8.615850e-47 |
| Msa0227360 | Msa0584600 | 0.803363 | 3.613734e-49 | -8.615850e-47 |
| Msa0233970 | Msa0584600 | 0.810157 | 1.325009e-50 | -8.615850e-47 |
| Msa0364790 | Msa0584600 | 0.846773 | 1.759716e-59 | -8.615850e-47 |
| Msa0365950 | Msa0584600 | 0.835667 | 1.468318e-56 | -8.615850e-47 |
| Msa0380600 | Msa0584600 | 0.814813 | 1.272384e-51 | -8.615850e-47 |
| Msa0393100 | Msa0584600 | 0.807225 | 5.607709e-50 | -8.615850e-47 |
| Msa0402800 | Msa0584600 | 0.809797 | 1.584578e-50 | -8.615850e-47 |
| Msa0412260 | Msa0584600 | 0.829958 | 3.847295e-55 | -8.615850e-47 |
| Msa0413870 | Msa0584600 | 0.808611 | 2.844510e-50 | -8.615850e-47 |
| Msa0430240 | Msa0584600 | 0.811479 | 6.857709e-51 | -8.615850e-47 |
| Msa0443450 | Msa0584600 | 0.822342 | 2.493375e-53 | -8.615850e-47 |
| Msa0456770 | Msa0584600 | 0.853755 | 1.936797e-61 | -8.615850e-47 |
| Msa0241480 | Msa0584600 | 0.808518 | 2.977957e-50 | -8.615850e-47 |
| Msa0260520 | Msa0584600 | 0.846427 | 2.187475e-59 | -8.615850e-47 |
| Msa0260530 | Msa0584600 | 0.820102 | 8.188470e-53 | -8.615850e-47 |
| Msa0264500 | Msa0584600 | 0.836936 | 6.983864e-57 | -8.615850e-47 |
| Msa0264520 | Msa0584600 | 0.818444 | 1.953823e-52 | -8.615850e-47 |
| Msa0264680 | Msa0584600 | 0.877576 | 5.626271e-69 | -8.615850e-47 |
| Msa0265270 | Msa0584600 | 0.828254 | 9.959444e-55 | -8.615850e-47 |
| Msa0272400 | Msa0584600 | 0.813841 | 2.086439e-51 | -8.615850e-47 |
| Msa0276430 | Msa0584600 | 0.835555 | 1.567632e-56 | -8.615850e-47 |
| Msa0279430 | Msa0584600 | 0.808472 | 3.046439e-50 | -8.615850e-47 |
| Msa0302510 | Msa0584600 | 0.839879 | 1.216980e-57 | -8.615850e-47 |
| Msa0302730 | Msa0584600 | 0.886795 | 2.505963e-72 | -8.615850e-47 |
| Msa0302840 | Msa0584600 | 0.819655 | 1.036163e-52 | -8.615850e-47 |
| Msa0306310 | Msa0584600 | 0.822159 | 2.750402e-53 | -8.615850e-47 |
| Msa0312590 | Msa0584600 | 0.814024 | 1.901827e-51 | -8.615850e-47 |
| Msa0316470 | Msa0584600 | 0.834028 | 3.796947e-56 | -8.615850e-47 |
| Msa0319020 | Msa0584600 | 0.830640 | 2.620999e-55 | -8.615850e-47 |
| Msa0339720 | Msa0584600 | 0.863161 | 3.032065e-64 | -8.615850e-47 |
| Msa0345980 | Msa0584600 | 0.803650 | 3.150659e-49 | -8.615850e-47 |
| Msa0355550 | Msa0584600 | 0.814416 | 1.557601e-51 | -8.615850e-47 |
| Msa0484800 | Msa0584600 | 0.830444 | 2.927513e-55 | -8.615850e-47 |
| Msa0488580 | Msa0584600 | 0.827068 | 1.918185e-54 | -8.615850e-47 |
| Msa0497860 | Msa0584600 | 0.812071 | 5.097271e-51 | -8.615850e-47 |
| Msa0529000 | Msa0584600 | 0.809116 | 2.218178e-50 | -8.615850e-47 |
| Msa0530730 | Msa0584600 | 0.808975 | 2.377662e-50 | -8.615850e-47 |
| Msa0534870 | Msa0584600 | 0.811851 | 5.693603e-51 | -8.615850e-47 |
| Msa0545050 | Msa0584600 | 0.847944 | 8.392536e-60 | -8.615850e-47 |
| Msa0549140 | Msa0584600 | 0.833406 | 5.430810e-56 | -8.615850e-47 |
| Msa0558390 | Msa0584600 | 0.822811 | 1.939404e-53 | -8.615850e-47 |
| Msa0574930 | Msa0584600 | 0.801983 | 6.958466e-49 | -8.615850e-47 |
| Msa0579670 | Msa0584600 | 0.809412 | 1.916239e-50 | -8.615850e-47 |
| Msa0584580 | Msa0584600 | 0.982830 | 4.101024e-156 | -8.615850e-47 |
| Msa0584600 | Msa0588670 | 0.861005 | 1.389791e-63 | -8.615850e-47 |
| Msa0584600 | Msa0588710 | 0.856015 | 4.280933e-62 | -8.615850e-47 |
| Msa0584600 | Msa0590390 | 0.806597 | 7.613396e-50 | -8.615850e-47 |
| Msa0584600 | Msa0600590 | 0.853669 | 2.051589e-61 | -8.615850e-47 |
| Msa0584600 | Msa0604570 | 0.815452 | 9.177895e-52 | -8.615850e-47 |
| Msa0584600 | Msa0611060 | 0.828784 | 7.416804e-55 | -8.615850e-47 |
| Msa0584600 | Msa0615210 | 0.831566 | 1.552244e-55 | -8.615850e-47 |
| Msa0584600 | Msa0628810 | 0.831416 | 1.690290e-55 | -8.615850e-47 |
| Msa0584600 | Msa0631320 | 0.811457 | 6.933818e-51 | -8.615850e-47 |
| Msa0584600 | Msa0635270 | 0.825964 | 3.517505e-54 | -8.615850e-47 |
| Msa0584600 | Msa0641130 | 0.846254 | 2.438114e-59 | -8.615850e-47 |
| Msa0584600 | Msa0645560 | 0.813178 | 2.919107e-51 | -8.615850e-47 |
| Msa0584600 | Msa0662580 | 0.805209 | 1.491013e-49 | -8.615850e-47 |
| Msa0584600 | Msa0666530 | 0.810107 | 1.358418e-50 | -8.615850e-47 |
| Msa0584600 | Msa0679670 | 0.829122 | 6.143264e-55 | -8.615850e-47 |
| Msa0584600 | Msa0685240 | 0.820079 | 8.289383e-53 | -8.615850e-47 |
| Msa0584600 | Msa0696100 | 0.829043 | 6.418574e-55 | -8.615850e-47 |
| Msa0584600 | Msa0697680 | 0.801564 | 8.484084e-49 | -8.615850e-47 |
| Msa0584600 | Msa0698450 | 0.811978 | 5.341138e-51 | -8.615850e-47 |
| Msa0584600 | Msa0698460 | 0.815597 | 8.519236e-52 | -8.615850e-47 |
| Msa0584600 | Msa0713060 | 0.848513 | 5.842055e-60 | -8.615850e-47 |
| Msa0584600 | Msa0729350 | 0.819301 | 1.247823e-52 | -8.615850e-47 |
| Msa0584600 | Msa0734940 | 0.801604 | 8.324169e-49 | -8.615850e-47 |
| Msa0584600 | Msa0743510 | 0.821042 | 4.981289e-53 | -8.615850e-47 |
| Msa0584600 | Msa0743870 | 0.809329 | 1.996585e-50 | -8.615850e-47 |
| Msa0584600 | Msa0744640 | 0.839823 | 1.258592e-57 | -8.615850e-47 |
| Msa0584600 | Msa0769720 | 0.815036 | 1.135295e-51 | -8.615850e-47 |
| Msa0584600 | Msa0772280 | 0.812590 | 3.927656e-51 | -8.615850e-47 |
| Msa0584600 | Msa0787790 | 0.833892 | 4.108359e-56 | -8.615850e-47 |
| Msa0584600 | Msa0790920 | 0.822387 | 2.434317e-53 | -8.615850e-47 |
| Msa0584600 | Msa0798450 | 0.811986 | 5.319789e-51 | -8.615850e-47 |
| Msa0584600 | Msa0807670 | 0.833725 | 4.521811e-56 | -8.615850e-47 |
| Msa0584600 | Msa0807680 | 0.829823 | 4.149279e-55 | -8.615850e-47 |
| Msa0584600 | Msa0810440 | 0.834904 | 2.288325e-56 | -8.615850e-47 |
| Msa0584600 | Msa0812530 | 0.818150 | 2.277403e-52 | -8.615850e-47 |
| Msa0584600 | Msa0812950 | 0.801760 | 7.735394e-49 | -8.615850e-47 |
| Msa0584600 | Msa0816630 | 0.832456 | 9.354634e-56 | -8.615850e-47 |
| Msa0584600 | Msa0817710 | 0.805383 | 1.370948e-49 | -8.615850e-47 |
| Msa0584600 | Msa0824930 | 0.812234 | 4.696380e-51 | -8.615850e-47 |
| Msa0584600 | Msa0828200 | 0.807486 | 4.937244e-50 | -8.615850e-47 |
| Msa0584600 | Msa0841730 | 0.839845 | 1.241448e-57 | -8.615850e-47 |
| Msa0584600 | Msa0852790 | 0.807754 | 4.332113e-50 | -8.615850e-47 |
| Msa0584600 | Msa0853440 | 0.801407 | 9.137743e-49 | -8.615850e-47 |
| Msa0584600 | Msa0862620 | 0.803684 | 3.099989e-49 | -8.615850e-47 |
| Msa0584600 | Msa0863940 | 0.807735 | 4.371058e-50 | -8.615850e-47 |
| Msa0584600 | Msa0863990 | 0.859131 | 5.112276e-63 | -8.615850e-47 |
| Msa0584600 | Msa0870510 | 0.823463 | 1.366428e-53 | -8.615850e-47 |
| Msa0584600 | Msa0930740 | 0.810724 | 9.996598e-51 | -8.615850e-47 |
| Msa0584600 | Msa0945130 | 0.859152 | 5.040432e-63 | -8.615850e-47 |
| Msa0584600 | Msa0968050 | 0.819929 | 8.970967e-53 | -8.615850e-47 |
| Msa0584600 | Msa1011250 | 0.842282 | 2.844579e-58 | -8.615850e-47 |
| Msa0584600 | Msa1016960 | 0.851920 | 6.479788e-61 | -8.615850e-47 |
| Msa0584600 | Msa1023310 | 0.820548 | 6.472004e-53 | -8.615850e-47 |
| Msa0584600 | Msa1025750 | 0.811318 | 7.434932e-51 | -8.615850e-47 |
| Msa0584600 | Msa1031460 | 0.831828 | 1.337488e-55 | -8.615850e-47 |
| Msa0584600 | Msa1034450 | 0.804577 | 2.020889e-49 | -8.615850e-47 |
| Msa0584600 | Msa1058200 | 0.857671 | 1.392541e-62 | -8.615850e-47 |
| Msa0584600 | Msa1059670 | 0.806652 | 7.413978e-50 | -8.615850e-47 |
| Msa0584600 | Msa1062040 | 0.824646 | 7.210312e-54 | -8.615850e-47 |
| Msa0584600 | Msa1062080 | 0.809113 | 2.221765e-50 | -8.615850e-47 |
| Msa0584600 | Msa1068380 | 0.806638 | 7.463562e-50 | -8.615850e-47 |
| Msa0584600 | Msa1069890 | 0.825725 | 4.007230e-54 | -8.615850e-47 |
| Msa0584600 | Msa1070540 | 0.843309 | 1.517102e-58 | -8.615850e-47 |
| Msa0584600 | Msa1074200 | 0.803833 | 2.886622e-49 | -8.615850e-47 |
| Msa0584600 | Msa1086490 | -0.800298 | 1.538809e-48 | -8.615850e-47 |
| Msa0584600 | Msa1089190 | 0.819631 | 1.049280e-52 | -8.615850e-47 |
| Msa0584600 | Msa1101240 | 0.844867 | 5.794840e-59 | -8.615850e-47 |
| Msa0584600 | Msa1107200 | 0.829935 | 3.896535e-55 | -8.615850e-47 |
| Msa0584600 | Msa1109670 | 0.815066 | 1.118447e-51 | -8.615850e-47 |
| Msa0584600 | Msa1109810 | 0.818092 | 2.347980e-52 | -8.615850e-47 |
| Msa0584600 | Msa1111610 | 0.811647 | 6.305996e-51 | -8.615850e-47 |
| Msa0584600 | Msa1113100 | 0.835571 | 1.552746e-56 | -8.615850e-47 |
| Msa0584600 | Msa1114670 | 0.810423 | 1.161552e-50 | -8.615850e-47 |
| Msa0584600 | Msa1119920 | 0.821172 | 4.649413e-53 | -8.615850e-47 |
| Msa0584600 | Msa1128790 | 0.820840 | 5.544166e-53 | -8.615850e-47 |
| Msa0584600 | Msa1131430 | 0.810120 | 1.350088e-50 | -8.615850e-47 |
| Msa0584600 | Msa1131790 | 0.855855 | 4.768167e-62 | -8.615850e-47 |
| Msa0584600 | Msa1147640 | 0.803210 | 3.886077e-49 | -8.615850e-47 |
| Msa0584600 | Msa1150780 | 0.824938 | 6.153458e-54 | -8.615850e-47 |
| Msa0584600 | Msa1157110 | 0.804045 | 2.607819e-49 | -8.615850e-47 |
| Msa0584600 | Msa1157670 | 0.820474 | 6.730397e-53 | -8.615850e-47 |
| Msa0584600 | Msa1159170 | 0.814711 | 1.340440e-51 | -8.615850e-47 |
| Msa0584600 | Msa1180720 | 0.821523 | 3.859149e-53 | -8.615850e-47 |
| Msa0584600 | Msa1180930 | 0.818650 | 1.754597e-52 | -8.615850e-47 |
| Msa0584600 | Msa1183140 | 0.838768 | 2.363936e-57 | -8.615850e-47 |
| Msa0584600 | Msa1187490 | 0.806584 | 7.663744e-50 | -8.615850e-47 |
| Msa0584600 | Msa1188350 | 0.803103 | 4.089419e-49 | -8.615850e-47 |
| Msa0584600 | Msa1199870 | 0.816680 | 4.880066e-52 | -8.615850e-47 |
| Msa0584600 | Msa1208990 | 0.845268 | 4.515180e-59 | -8.615850e-47 |
| Msa0584600 | Msa1212050 | 0.809940 | 1.476033e-50 | -8.615850e-47 |
| Msa0584600 | Msa1212130 | 0.800863 | 1.180412e-48 | -8.615850e-47 |
| Msa0584600 | Msa1212470 | 0.821975 | 3.033508e-53 | -8.615850e-47 |
| Msa0584600 | Msa1214170 | 0.843469 | 1.374384e-58 | -8.615850e-47 |
| Msa0584600 | Msa1217260 | 0.803467 | 3.438631e-49 | -8.615850e-47 |
| Msa0584600 | Msa1218160 | 0.851410 | 9.038366e-61 | -8.615850e-47 |
| Msa0584600 | Msa1221220 | 0.832539 | 8.925063e-56 | -8.615850e-47 |
| Msa0584600 | Msa1221240 | 0.830866 | 2.306946e-55 | -8.615850e-47 |
| Msa0584600 | Msa1225580 | 0.888444 | 5.872503e-73 | -8.615850e-47 |
| Msa0584600 | Msa1229480 | 0.807535 | 4.819875e-50 | -8.615850e-47 |
| Msa0584600 | Msa1231710 | 0.803820 | 2.904855e-49 | -8.615850e-47 |
| Msa0584600 | Msa1246780 | 0.831724 | 1.419452e-55 | -8.615850e-47 |
| Msa0584600 | Msa1246790 | 0.852791 | 3.661893e-61 | -8.615850e-47 |
| Msa0584600 | Msa1252810 | 0.855118 | 7.817577e-62 | -8.615850e-47 |
| Msa0584600 | Msa1256060 | 0.813306 | 2.736986e-51 | -8.615850e-47 |
| Msa0584600 | Msa1259860 | 0.836024 | 1.192271e-56 | -8.615850e-47 |
| Msa0584600 | Msa1260060 | 0.814953 | 1.184770e-51 | -8.615850e-47 |
| Msa0584600 | Msa1260680 | 0.830456 | 2.906327e-55 | -8.615850e-47 |
| Msa0584600 | Msa1272010 | 0.803569 | 3.274116e-49 | -8.615850e-47 |
| Msa0584600 | Msa1274380 | 0.801776 | 7.677101e-49 | -8.615850e-47 |
| Msa0584600 | Msa1284090 | 0.823122 | 1.641999e-53 | -8.615850e-47 |
| Msa0584600 | Msa1286210 | 0.831673 | 1.461137e-55 | -8.615850e-47 |
| Msa0584600 | Msa1286220 | 0.864557 | 1.116049e-64 | -8.615850e-47 |
| Msa0584600 | Msa1296240 | 0.816332 | 5.840720e-52 | -8.615850e-47 |
| Msa0584600 | Msa1309760 | 0.842316 | 2.785750e-58 | -8.615850e-47 |
| Msa0584600 | Msa1312440 | 0.829404 | 5.247731e-55 | -8.615850e-47 |
| Msa0584600 | Msa1329900 | 0.814154 | 1.779721e-51 | -8.615850e-47 |
| Msa0584600 | Msa1355510 | 0.876754 | 1.085515e-68 | -8.615850e-47 |
| Msa0584600 | Msa1360020 | 0.842760 | 2.123399e-58 | -8.615850e-47 |
| Msa0584600 | Msa1364080 | 0.821494 | 3.919062e-53 | -8.615850e-47 |
| Msa0584600 | Msa1369320 | 0.832574 | 8.748582e-56 | -8.615850e-47 |
| Msa0584600 | Msa1369920 | -0.808545 | 2.937968e-50 | -8.615850e-47 |
| Msa0584600 | Msa1370810 | 0.801157 | 1.027691e-48 | -8.615850e-47 |
| Msa0584600 | Msa1386000 | 0.816124 | 6.499816e-52 | -8.615850e-47 |
| Msa0584600 | Msa1389640 | 0.800154 | 1.646249e-48 | -8.615850e-47 |
| Msa0584600 | Msa1397390 | 0.857999 | 1.113110e-62 | -8.615850e-47 |
| Msa0584600 | Msa1407880 | 0.812614 | 3.880808e-51 | -8.615850e-47 |
| Msa0584600 | Msa1413800 | 0.819368 | 1.204978e-52 | -8.615850e-47 |
| Msa0584600 | Msa1420930 | 0.812545 | 4.016409e-51 | -8.615850e-47 |
| Msa0584600 | Msa1420940 | 0.869685 | 2.571817e-66 | -8.615850e-47 |
| Msa0584600 | Msa1423540 | 0.805418 | 1.347811e-49 | -8.615850e-47 |
| Msa0584600 | Msa1433410 | 0.858893 | 6.026175e-63 | -8.615850e-47 |
| Msa0584600 | Msa1435320 | 0.824441 | 8.056786e-54 | -8.615850e-47 |
| Msa0584600 | Msa1436090 | 0.816883 | 4.394592e-52 | -8.615850e-47 |
| Msa0584600 | Msa1443400 | 0.824762 | 6.769246e-54 | -8.615850e-47 |
| Msa0584600 | Msa1443620 | 0.864735 | 9.816383e-65 | -8.615850e-47 |
| Msa0584600 | Msa1443640 | 0.803600 | 3.227143e-49 | -8.615850e-47 |
| Msa0584600 | Msa1448040 | 0.825604 | 4.282420e-54 | -8.615850e-47 |
| Msa0584600 | Msa1451990 | 0.821151 | 4.701261e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0584600 | MtrunA17_Chr4g0021961 | 96.364 | 110 | 4 | 0 | 1 | 110 | 1 | 110 | 3.41e-72 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGCAACCCTCTTTATCTT+AGG | 0.308528 | 4_2:-4370513 | None:intergenic |
| GATAAAGAGGGTTGCTGTTA+AGG | 0.330238 | 4_2:+4370518 | Msa0584600:CDS |
| AGACAAGGATATGAGCTTCT+TGG | 0.379115 | 4_2:+4370363 | Msa0584600:CDS |
| CTAAAAGACCTAAGATAAAG+AGG | 0.402553 | 4_2:+4370505 | Msa0584600:CDS |
| CTAGCTCCCCTCTTCCTACT+AGG | 0.437842 | 4_2:+4370622 | Msa0584600:CDS |
| TATGAGCTTCTTGGTTTACA+AGG | 0.464864 | 4_2:+4370372 | Msa0584600:CDS |
| CCTACTAGGAAGATCCTTTG+AGG | 0.470260 | 4_2:+4370636 | Msa0584600:CDS |
| CCTCAAAGGATCTTCCTAGT+AGG | 0.477106 | 4_2:-4370636 | None:intergenic |
| GTTGCGAACGAGTGTGTTCA+TGG | 0.491971 | 4_2:-4370319 | None:intergenic |
| ATATCCTTGTCTCCTGCTGA+AGG | 0.525798 | 4_2:-4370352 | None:intergenic |
| GGATCTTCCTAGTAGGAAGA+GGG | 0.550819 | 4_2:-4370629 | None:intergenic |
| ACACCACTCTCACCTTCAGC+AGG | 0.551528 | 4_2:+4370340 | Msa0584600:CDS |
| AGGATCTTCCTAGTAGGAAG+AGG | 0.558203 | 4_2:-4370630 | None:intergenic |
| TCTCCTGCTGAAGGTGAGAG+TGG | 0.568581 | 4_2:-4370343 | None:intergenic |
| CTCACCTTCAGCAGGAGACA+AGG | 0.589904 | 4_2:+4370348 | Msa0584600:CDS |
| ATGAGCTTCTTGGTTTACAA+GGG | 0.601511 | 4_2:+4370373 | Msa0584600:CDS |
| TAAAAGACCTAAGATAAAGA+GGG | 0.605297 | 4_2:+4370506 | Msa0584600:CDS |
| GACGCAGAAGAGCCAAACAA+AGG | 0.632309 | 4_2:+4370427 | Msa0584600:CDS |
| GATCTTCCTAGTAGGAAGAG+GGG | 0.633617 | 4_2:-4370628 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAAAGACCTAAGATAAAGA+GGG | + | chr4_2:4370506-4370525 | Msa0584600:CDS | 25.0% |
| ! | GAGAAAGATTTTCCTTTGTT+TGG | - | chr4_2:4370442-4370461 | None:intergenic | 30.0% |
| ! | CTCTTTATCTTAGGTCTTTT+AGG | - | chr4_2:4370507-4370526 | None:intergenic | 30.0% |
| CTAAAAGACCTAAGATAAAG+AGG | + | chr4_2:4370505-4370524 | Msa0584600:CDS | 30.0% | |
| !!! | GTTTTGTTGTTTATGAGAAC+TGG | + | chr4_2:4370561-4370580 | Msa0584600:CDS | 30.0% |
| TATGAGCTTCTTGGTTTACA+AGG | + | chr4_2:4370372-4370391 | Msa0584600:CDS | 35.0% | |
| ATGAGCTTCTTGGTTTACAA+GGG | + | chr4_2:4370373-4370392 | Msa0584600:CDS | 35.0% | |
| AGACAAGGATATGAGCTTCT+TGG | + | chr4_2:4370363-4370382 | Msa0584600:CDS | 40.0% | |
| ACAGCAACCCTCTTTATCTT+AGG | - | chr4_2:4370516-4370535 | None:intergenic | 40.0% | |
| ! | GATAAAGAGGGTTGCTGTTA+AGG | + | chr4_2:4370518-4370537 | Msa0584600:CDS | 40.0% |
| ATATCCTTGTCTCCTGCTGA+AGG | - | chr4_2:4370355-4370374 | None:intergenic | 45.0% | |
| GATCTTCCTAGTAGGAAGAG+GGG | - | chr4_2:4370631-4370650 | None:intergenic | 45.0% | |
| GGATCTTCCTAGTAGGAAGA+GGG | - | chr4_2:4370632-4370651 | None:intergenic | 45.0% | |
| AGGATCTTCCTAGTAGGAAG+AGG | - | chr4_2:4370633-4370652 | None:intergenic | 45.0% | |
| GACGCAGAAGAGCCAAACAA+AGG | + | chr4_2:4370427-4370446 | Msa0584600:CDS | 50.0% | |
| ACACCACTCTCACCTTCAGC+AGG | + | chr4_2:4370340-4370359 | Msa0584600:CDS | 55.0% | |
| TCTCCTGCTGAAGGTGAGAG+TGG | - | chr4_2:4370346-4370365 | None:intergenic | 55.0% | |
| CTCACCTTCAGCAGGAGACA+AGG | + | chr4_2:4370348-4370367 | Msa0584600:CDS | 55.0% | |
| CTAGCTCCCCTCTTCCTACT+AGG | + | chr4_2:4370622-4370641 | Msa0584600:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 4370321 | 4370656 | 4370321 | ID=Msa0584600;Name=Msa0584600 |
| chr4_2 | mRNA | 4370321 | 4370656 | 4370321 | ID=Msa0584600-mRNA-1;Parent=Msa0584600;Name=Msa0584600-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|111 |
| chr4_2 | exon | 4370321 | 4370656 | 4370321 | ID=Msa0584600-mRNA-1:exon:1131;Parent=Msa0584600-mRNA-1 |
| chr4_2 | CDS | 4370321 | 4370656 | 4370321 | ID=Msa0584600-mRNA-1:cds;Parent=Msa0584600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
