AlfalfaGEDB | Msa0685240

M. sativa cultivar zhongmu-4 / Msa0685240

KEGG: K01188|K01237
GO: GO:0003674 GO:0003824 GO:0004338 GO:0004553 GO:0004565 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009987 GO:0010033 GO:0015925 GO:0015926 GO:0016143 GO:0016145 GO:0016787 GO:0016798 GO:0019137 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0033907 GO:0042221 GO:0043436 GO:0044237 GO:0044248 GO:0044273 GO:0044281 GO:0047701 GO:0050896 GO:0071704 GO:0080083 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658
PFAM: PF00232.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0685240	XP_013456264.1	96.367	523	15	2	1	523	1	519	0.0	1040

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0685240	sp\|Q5Z9Z0\|BGL24_ORYSJ	62.526	475	178	0	37	511	28	502	0.0	658

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0685240	A0A072UWR5	96.367	523	15	2	1	523	1	519	0.0	1040

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0005260	Msa0685240	0.838018	3.688856e-57	-8.615850e-47
Msa0011050	Msa0685240	0.802059	6.713265e-49	-8.615850e-47
Msa0059900	Msa0685240	0.829809	4.182115e-55	-8.615850e-47
Msa0071470	Msa0685240	0.832511	9.068556e-56	-8.615850e-47
Msa0104810	Msa0685240	0.871342	7.352479e-67	-8.615850e-47
Msa0604220	Msa0685240	0.824968	6.053315e-54	-8.615850e-47
Msa0604250	Msa0685240	0.812049	5.155504e-51	-8.615850e-47
Msa0604570	Msa0685240	0.891529	3.656680e-74	-8.615850e-47
Msa0613150	Msa0685240	0.808666	2.768174e-50	-8.615850e-47
Msa0645560	Msa0685240	0.820487	6.684791e-53	-8.615850e-47
Msa0662580	Msa0685240	0.802745	4.849131e-49	-8.615850e-47
Msa0685060	Msa0685240	0.856653	2.780943e-62	-8.615850e-47
Msa0685240	Msa0696100	0.827282	1.704924e-54	-8.615850e-47
Msa0685240	Msa0772490	0.800798	1.216921e-48	-8.615850e-47
Msa0685240	Msa0807670	0.814866	1.238725e-51	-8.615850e-47
Msa0685240	Msa0807680	0.810411	1.168473e-50	-8.615850e-47
Msa0685240	Msa0868640	0.804420	2.179115e-49	-8.615850e-47
Msa0685240	Msa0968050	0.834109	3.623902e-56	-8.615850e-47
Msa0685240	Msa0971060	0.840669	7.564805e-58	-8.615850e-47
Msa0685240	Msa1025750	0.813223	2.854260e-51	-8.615850e-47
Msa0685240	Msa1031460	0.831732	1.413023e-55	-8.615850e-47
Msa0685240	Msa1070540	0.825521	4.480281e-54	-8.615850e-47
Msa0685240	Msa1101240	0.827786	1.290578e-54	-8.615850e-47
Msa0685240	Msa1109670	0.817334	3.479401e-52	-8.615850e-47
Msa0685240	Msa1114670	0.823530	1.318351e-53	-8.615850e-47
Msa0685240	Msa1120580	0.803330	3.670986e-49	-8.615850e-47
Msa0685240	Msa1131790	0.821138	4.733659e-53	-8.615850e-47
Msa0685240	Msa1157110	0.810150	1.329746e-50	-8.615850e-47
Msa0685240	Msa1159170	0.821807	3.318428e-53	-8.615850e-47
Msa0685240	Msa1212470	0.819881	9.202108e-53	-8.615850e-47
Msa0685240	Msa1214170	0.811541	6.650778e-51	-8.615850e-47
Msa0685240	Msa1221220	0.810282	1.245703e-50	-8.615850e-47
Msa0685240	Msa1225580	0.832834	7.539118e-56	-8.615850e-47
Msa0685240	Msa1246790	0.805952	1.041184e-49	-8.615850e-47
Msa0685240	Msa1299780	0.825020	5.885018e-54	-8.615850e-47
Msa0685240	Msa1329900	0.812664	3.783692e-51	-8.615850e-47
Msa0685240	Msa1355510	0.827242	1.743559e-54	-8.615850e-47
Msa0685240	Msa1360020	0.808504	2.998896e-50	-8.615850e-47
Msa0685240	Msa1362850	0.814285	1.665081e-51	-8.615850e-47
Msa0685240	Msa1420940	0.815877	7.380244e-52	-8.615850e-47
Msa0685240	Msa1422230	0.810313	1.226577e-50	-8.615850e-47
Msa0137560	Msa0685240	0.805964	1.035308e-49	-8.615850e-47
Msa0151170	Msa0685240	0.835429	1.686465e-56	-8.615850e-47
Msa0383900	Msa0685240	0.808354	3.228221e-50	-8.615850e-47
Msa0393100	Msa0685240	0.815729	7.961877e-52	-8.615850e-47
Msa0434300	Msa0685240	0.808643	2.799943e-50	-8.615850e-47
Msa0434400	Msa0685240	0.820929	5.288567e-53	-8.615850e-47
Msa0443450	Msa0685240	0.814467	1.517728e-51	-8.615850e-47
Msa0260530	Msa0685240	0.800651	1.304207e-48	-8.615850e-47
Msa0264680	Msa0685240	0.824895	6.298311e-54	-8.615850e-47
Msa0271540	Msa0685240	0.803284	3.750945e-49	-8.615850e-47
Msa0302730	Msa0685240	0.821611	3.682580e-53	-8.615850e-47
Msa0335080	Msa0685240	0.808078	3.695518e-50	-8.615850e-47
Msa0345980	Msa0685240	0.806903	6.561305e-50	-8.615850e-47
Msa0488580	Msa0685240	0.801158	1.027252e-48	-8.615850e-47
Msa0534270	Msa0685240	0.803689	3.092086e-49	-8.615850e-47
Msa0542530	Msa0685240	0.812381	4.362780e-51	-8.615850e-47
Msa0549140	Msa0685240	0.829837	4.116450e-55	-8.615850e-47
Msa0558390	Msa0685240	0.809431	1.898281e-50	-8.615850e-47
Msa0584580	Msa0685240	0.802030	6.805277e-49	-8.615850e-47
Msa0584600	Msa0685240	0.820079	8.289383e-53	-8.615850e-47
Msa0588710	Msa0685240	0.816003	6.917454e-52	-8.615850e-47
Msa0590390	Msa0685240	0.820313	7.327174e-53	-8.615850e-47
Msa0592650	Msa0685240	0.805525	1.279911e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0685240	MtrunA17_Chr4g0033321	96.367	523	15	2	1	523	1	519	0.0	1040
Msa0685240	MtrunA17_Chr4g0033401	95.985	523	18	1	1	523	1	520	0.0	1038
Msa0685240	MtrunA17_Chr4g0033331	88.528	523	57	2	1	523	5	524	0.0	940
Msa0685240	MtrunA17_Chr4g0033311	74.662	517	129	1	4	520	8	522	0.0	833
Msa0685240	MtrunA17_Chr3g0088441	73.025	519	136	2	6	520	3	521	0.0	816
Msa0685240	MtrunA17_Chr2g0329201	71.343	499	141	1	13	511	9	505	0.0	754
Msa0685240	MtrunA17_Chr6g0482131	72.479	476	131	0	36	511	35	510	0.0	738
Msa0685240	MtrunA17_Chr2g0329191	71.667	480	135	1	32	511	29	507	0.0	736
Msa0685240	MtrunA17_Chr4g0033191	68.267	479	152	0	33	511	39	517	0.0	719
Msa0685240	MtrunA17_Chr4g0033201	65.619	509	167	2	4	511	9	510	0.0	712
Msa0685240	MtrunA17_Chr4g0033271	65.625	512	172	2	1	511	1	509	0.0	712
Msa0685240	MtrunA17_Chr6g0482071	69.502	482	145	1	37	518	37	516	0.0	711
Msa0685240	MtrunA17_Chr4g0033341	65.545	505	168	3	8	511	42	541	0.0	709
Msa0685240	MtrunA17_Chr6g0482081	67.525	505	157	2	8	511	13	511	0.0	698
Msa0685240	MtrunA17_Chr2g0329321	64.188	511	154	3	1	511	5	486	0.0	691
Msa0685240	MtrunA17_Chr4g0033261	62.231	511	163	3	6	514	12	494	0.0	649
Msa0685240	MtrunA17_Chr4g0033231	61.277	501	164	3	13	511	19	491	0.0	633
Msa0685240	MtrunA17_Chr5g0430451	61.509	517	163	3	4	511	7	496	0.0	623
Msa0685240	MtrunA17_Chr4g0010501	60.924	476	180	3	36	511	23	492	0.0	610
Msa0685240	MtrunA17_Chr4g0006111	56.627	498	176	7	26	511	54	523	0.0	562
Msa0685240	MtrunA17_Chr3g0087261	54.599	511	216	6	4	511	10	507	0.0	560
Msa0685240	MtrunA17_Chr3g0087271	52.663	507	234	5	6	511	7	508	0.0	536
Msa0685240	MtrunA17_Chr4g0006131	56.996	486	170	9	37	511	42	499	0.0	534
Msa0685240	MtrunA17_Chr4g0043091	52.663	507	228	6	9	511	3	501	0.0	533
Msa0685240	MtrunA17_Chr4g0042171	49.414	512	247	6	10	518	3	505	6.24e-169	488
Msa0685240	MtrunA17_Chr6g0482941	47.563	513	256	7	3	514	13	513	1.02e-166	482
Msa0685240	MtrunA17_Chr6g0482951	47.358	511	255	7	5	514	16	513	2.38e-165	478
Msa0685240	MtrunA17_Chr2g0301231	58.273	417	137	6	105	511	1	390	9.13e-165	472
Msa0685240	MtrunA17_Chr3g0090111	48.963	482	231	6	37	517	19	486	1.11e-159	463
Msa0685240	MtrunA17_Chr3g0090131	48.861	483	233	5	36	517	20	489	1.27e-159	463
Msa0685240	MtrunA17_Chr4g0074561	47.817	481	234	5	42	513	40	512	1.76e-155	454
Msa0685240	MtrunA17_Chr4g0074551	47.193	481	248	5	42	520	55	531	1.15e-151	445
Msa0685240	MtrunA17_Chr2g0288071	45.962	520	267	7	5	519	38	548	5.11e-151	443
Msa0685240	MtrunA17_Chr2g0317841	43.902	492	263	7	37	523	32	515	7.75e-146	429
Msa0685240	MtrunA17_Chr2g0317821	44.715	492	259	7	37	523	32	515	1.79e-145	428
Msa0685240	MtrunA17_Chr4g0006971	46.201	487	246	7	36	520	26	498	2.40e-145	427
Msa0685240	MtrunA17_Chr7g0242681	47.107	484	225	9	37	511	38	499	2.09e-144	426
Msa0685240	MtrunA17_Chr7g0242691	45.816	478	243	6	36	511	30	493	8.42e-144	424
Msa0685240	MtrunA17_Chr2g0288021	43.520	517	280	9	6	518	5	513	3.77e-141	417
Msa0685240	MtrunA17_Chr1g0195611	45.791	487	236	8	32	511	22	487	4.26e-139	411
Msa0685240	MtrunA17_Chr5g0428831	45.287	488	238	9	32	511	22	488	2.20e-137	407
Msa0685240	MtrunA17_Chr3g0087201	55.589	331	142	2	181	511	17	342	5.83e-131	384
Msa0685240	MtrunA17_Chr5g0418871	59.197	299	119	2	56	354	2	297	3.66e-128	377
Msa0685240	MtrunA17_Chr7g0234111	44.142	478	247	6	38	514	76	534	3.44e-127	382
Msa0685240	MtrunA17_Chr7g0234091	42.531	482	255	5	38	517	76	537	1.01e-124	375
Msa0685240	MtrunA17_Chr7g0234131	42.977	477	251	6	38	512	76	533	1.51e-123	372
Msa0685240	MtrunA17_Chr1g0195641	48.338	391	181	6	39	423	29	404	1.68e-119	357
Msa0685240	MtrunA17_Chr7g0230651	43.158	380	192	5	83	458	17	376	4.09e-100	307
Msa0685240	MtrunA17_Chr3g0087191	77.931	145	32	0	36	180	21	165	6.57e-82	252
Msa0685240	MtrunA17_Chr7g0236731	48.000	250	123	2	125	373	27	270	4.71e-65	213
Msa0685240	MtrunA17_Chr7g0227561	40.146	274	123	5	38	307	47	283	2.01e-62	206
Msa0685240	MtrunA17_Chr4g0068871	25.647	425	231	12	101	513	183	534	1.71e-28	119
Msa0685240	MtrunA17_Chr5g0418861	50.549	91	44	1	423	512	1	91	6.72e-24	95.9
Msa0685240	MtrunA17_Chr8g0352881	37.879	132	69	2	237	358	24	152	7.44e-24	98.2
Msa0685240	MtrunA17_Chr8g0352881	55.556	54	23	1	46	99	7	59	1.63e-13	68.6
Msa0685240	MtrunA17_Chr7g0227591	53.704	54	25	0	460	513	14	67	3.29e-13	64.7
Msa0685240	MtrunA17_Chr2g0288031	47.458	59	30	1	188	246	3	60	3.57e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0685240	AT5G44640.1	53.772	517	227	5	1	516	1	506	0.0	576
Msa0685240	AT2G44450.1	55.858	478	206	2	37	514	31	503	0.0	568
Msa0685240	AT5G42260.1	54.528	508	219	5	1	507	1	497	0.0	568
Msa0685240	AT2G44480.1	54.375	480	218	1	36	515	34	512	0.0	563
Msa0685240	AT2G44480.3	54.375	480	218	1	36	515	65	543	0.0	563
Msa0685240	AT3G60130.1	55.672	476	205	3	37	511	30	500	0.0	559
Msa0685240	AT2G25630.1	51.786	504	220	4	14	516	7	488	0.0	536
Msa0685240	AT5G24550.1	51.064	517	247	6	9	521	5	519	0.0	535
Msa0685240	AT5G24540.1	51.440	521	239	8	9	521	5	519	0.0	524
Msa0685240	AT3G60140.1	49.900	499	239	6	16	511	12	502	0.0	524
Msa0685240	AT1G51470.1	53.653	479	208	7	36	512	44	510	6.23e-179	513
Msa0685240	AT1G26560.1	52.282	482	220	6	37	513	32	508	9.02e-179	513
Msa0685240	AT1G47600.1	53.027	479	211	7	36	512	44	510	2.87e-176	506
Msa0685240	AT1G47600.2	53.027	479	210	7	36	512	44	509	7.24e-176	505
Msa0685240	AT3G60120.1	51.452	482	223	7	36	511	13	489	9.40e-174	501
Msa0685240	AT2G44460.1	48.276	522	255	6	1	519	3	512	2.23e-173	501
Msa0685240	AT2G44470.3	47.444	489	253	4	27	512	19	506	1.77e-170	494
Msa0685240	AT5G54570.1	49.485	485	228	4	36	511	29	505	9.94e-170	491
Msa0685240	AT3G18080.1	50.513	487	231	7	32	516	34	512	1.18e-169	489
Msa0685240	AT2G44490.1	49.590	488	239	6	29	511	7	492	8.69e-169	489
Msa0685240	AT3G18070.3	48.780	492	232	9	28	516	21	495	7.86e-165	477
Msa0685240	AT2G44480.2	52.555	411	194	1	105	515	1	410	7.09e-164	471
Msa0685240	AT3G18070.1	48.984	492	237	9	28	516	21	501	1.02e-163	474
Msa0685240	AT5G25980.2	47.719	526	263	9	4	523	17	536	1.22e-163	476
Msa0685240	AT3G60130.2	54.106	414	184	3	99	511	40	448	1.02e-162	470
Msa0685240	AT5G36890.2	49.689	483	228	5	38	517	17	487	2.11e-159	462
Msa0685240	AT5G36890.1	49.793	482	227	5	38	516	17	486	2.47e-159	462
Msa0685240	AT3G09260.1	47.917	480	245	5	37	513	35	512	2.01e-157	459
Msa0685240	AT2G32860.2	45.228	482	261	3	36	514	93	574	6.04e-157	461
Msa0685240	AT3G60130.3	53.140	414	177	4	99	511	40	437	9.71e-156	452
Msa0685240	AT2G32860.1	45.228	482	260	4	36	514	93	573	1.84e-155	457
Msa0685240	AT5G26000.1	46.899	516	254	10	8	511	4	511	3.51e-154	451
Msa0685240	AT3G03640.1	44.574	516	275	5	1	511	3	512	6.52e-154	450
Msa0685240	AT5G24540.2	50.439	456	213	7	9	457	5	454	1.33e-153	446
Msa0685240	AT1G75940.1	47.047	491	244	9	37	516	37	522	4.80e-152	446
Msa0685240	AT3G21370.1	46.170	483	250	8	36	511	32	511	6.43e-151	442
Msa0685240	AT1G52400.3	44.942	514	270	10	8	514	11	518	3.54e-150	441
Msa0685240	AT1G52400.1	44.942	514	270	10	8	514	11	518	3.54e-150	441
Msa0685240	AT5G28510.1	45.732	492	255	7	31	513	33	521	2.09e-149	439
Msa0685240	AT1G66280.1	45.726	503	261	8	16	511	13	510	7.88e-149	437
Msa0685240	AT2G44470.1	46.189	433	230	3	27	457	19	450	5.40e-147	429
Msa0685240	AT5G54570.3	48.492	431	206	3	36	458	29	451	9.00e-147	429
Msa0685240	AT1G61820.1	46.612	487	252	7	29	511	22	504	2.54e-146	430
Msa0685240	AT1G66270.1	45.851	482	251	7	37	513	36	512	7.33e-146	429
Msa0685240	AT3G60140.2	48.900	409	199	5	16	422	12	412	1.35e-145	426
Msa0685240	AT1G02850.2	47.158	475	234	7	38	511	27	485	7.25e-145	426
Msa0685240	AT5G25980.3	47.484	457	232	6	4	458	17	467	7.74e-143	419
Msa0685240	AT5G25980.1	47.484	457	232	6	4	458	17	467	7.74e-143	419
Msa0685240	AT1G66270.2	45.643	482	250	8	37	513	36	510	8.63e-143	421
Msa0685240	AT4G21760.2	43.725	510	274	7	6	511	21	521	2.00e-140	416
Msa0685240	AT1G02850.5	44.980	498	234	8	38	511	27	508	2.79e-140	415
Msa0685240	AT1G02850.4	45.090	499	233	9	38	511	27	509	6.12e-139	411
Msa0685240	AT1G60090.2	43.878	490	249	10	37	522	24	491	3.48e-137	406
Msa0685240	AT2G44480.4	59.936	312	123	2	36	347	65	374	4.17e-137	402
Msa0685240	AT4G27830.1	42.520	508	261	8	9	511	3	484	7.25e-137	406
Msa0685240	AT5G54570.2	48.077	416	199	4	105	511	1	408	8.71e-137	403
Msa0685240	AT1G61810.1	44.807	491	262	8	37	522	33	519	3.81e-136	404
Msa0685240	AT1G02850.1	45.895	475	213	8	38	511	27	458	7.62e-136	402
Msa0685240	AT5G26000.2	45.987	461	231	8	8	458	4	456	1.26e-134	398
Msa0685240	AT2G44450.2	51.541	357	168	2	158	514	1	352	1.87e-133	391
Msa0685240	AT4G21760.1	42.745	510	269	8	6	511	21	511	1.88e-133	398
Msa0685240	AT4G22100.1	44.561	478	243	9	38	511	23	482	3.57e-133	396
Msa0685240	AT1G60090.1	42.600	500	248	11	37	522	24	498	3.92e-133	396
Msa0685240	AT1G61810.3	46.204	461	240	7	42	498	38	494	1.17e-131	394
Msa0685240	AT3G62750.1	42.041	490	252	8	26	511	12	473	1.77e-129	386
Msa0685240	AT3G62750.2	42.041	490	252	8	26	511	38	499	3.51e-129	387
Msa0685240	AT4G27820.1	43.750	480	247	7	36	511	22	482	5.00e-129	385
Msa0685240	AT1G45191.4	43.724	478	241	9	38	511	30	483	5.58e-128	383
Msa0685240	AT2G44470.2	45.910	379	202	3	27	403	19	396	5.72e-127	376
Msa0685240	AT1G52400.2	43.860	456	244	9	8	457	11	460	6.28e-125	374
Msa0685240	AT1G45191.6	42.300	487	246	9	38	511	30	494	1.87e-124	374
Msa0685240	AT1G45191.2	42.469	478	253	9	38	511	30	489	6.04e-124	373
Msa0685240	AT3G62740.1	40.695	489	265	10	26	511	12	478	8.10e-123	370
Msa0685240	AT1G45191.1	41.851	497	246	10	38	511	30	506	8.54e-123	370
Msa0685240	AT1G02850.3	46.324	408	186	6	38	422	27	424	4.31e-120	360
Msa0685240	AT5G48375.1	45.414	447	172	9	33	476	34	411	1.13e-119	359
Msa0685240	AT3G18070.4	51.198	334	156	5	28	361	21	347	1.15e-117	352
Msa0685240	AT2G44460.2	47.956	367	187	4	156	519	1	366	5.10e-112	340
Msa0685240	AT3G62750.4	41.553	438	225	7	26	460	38	447	6.21e-112	340
Msa0685240	AT1G60270.1	48.256	344	167	5	37	377	24	359	1.08e-111	337
Msa0685240	AT1G61810.5	43.499	423	230	8	105	522	1	419	1.14e-108	330
Msa0685240	AT3G62740.2	41.549	426	225	9	34	457	20	423	1.44e-108	330
Msa0685240	AT1G51490.1	48.864	352	163	7	44	392	27	364	4.14e-108	328
Msa0685240	AT1G61810.4	45.128	390	207	6	37	422	33	419	4.47e-108	329
Msa0685240	AT4G27830.2	41.707	410	222	5	105	511	1	396	1.43e-106	325
Msa0685240	AT1G45191.5	48.512	336	161	5	38	370	30	356	2.64e-106	324
Msa0685240	AT1G45191.3	48.512	336	161	5	38	370	30	356	2.80e-106	324
Msa0685240	AT3G62750.7	46.246	333	163	4	26	358	12	328	2.09e-104	318
Msa0685240	AT3G62750.8	46.246	333	163	4	26	358	12	328	2.09e-104	318
Msa0685240	AT3G62750.3	46.246	333	163	4	26	358	38	354	1.54e-103	318
Msa0685240	AT2G44480.5	48.013	302	156	1	214	515	6	306	1.56e-101	308
Msa0685240	AT3G18070.2	47.289	332	166	6	188	516	99	424	8.02e-100	308
Msa0685240	AT3G18070.2	55.556	72	31	1	28	99	21	91	1.46e-18	88.6
Msa0685240	AT4G27820.2	42.092	411	220	6	105	511	1	397	1.66e-99	307
Msa0685240	AT4G27820.3	42.092	411	220	6	105	511	1	397	1.66e-99	307
Msa0685240	AT1G61820.3	44.932	365	194	6	151	511	4	365	4.27e-99	304
Msa0685240	AT3G62750.6	39.659	411	221	7	105	511	1	388	1.38e-96	299
Msa0685240	AT3G62750.5	39.659	411	221	7	105	511	1	388	1.38e-96	299
Msa0685240	AT3G18070.7	46.541	318	161	6	202	516	1	312	1.05e-92	285
Msa0685240	AT1G61810.2	51.111	270	130	2	37	306	33	300	3.00e-89	276
Msa0685240	AT1G60270.2	47.101	276	139	4	105	377	1	272	5.67e-82	257
Msa0685240	AT3G18070.5	45.378	238	126	3	189	424	100	335	3.04e-66	218
Msa0685240	AT3G18070.5	55.556	72	31	1	28	99	21	91	7.48e-19	88.6
Msa0685240	AT3G18070.6	44.000	225	122	3	202	424	1	223	1.87e-59	196
Msa0685240	AT5G16580.1	36.025	322	177	7	152	468	2	299	6.46e-49	171
Msa0685240	AT3G06510.2	24.829	439	253	14	100	513	159	545	4.99e-29	121
Msa0685240	AT3G06510.1	24.883	426	235	14	100	513	159	511	3.28e-28	119

Find 101 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTAATTTATATTACTGAAAA+TGG	0.152248	4_4:+49343499	Msa0685240:CDS
TTCCCAGAAGGCTTCATATT+TGG	0.197275	4_4:+49341929	Msa0685240:CDS
CACCAGGTCGATGCTCTTCT+TGG	0.247168	4_4:+49342636	Msa0685240:CDS
TTTGTTTAATTATAGGTTTA+TGG	0.249802	4_4:+49342961	Msa0685240:intron
AATTGCACCGGTGGTGATTC+TGG	0.263758	4_4:+49342668	Msa0685240:CDS
GAATCACCACCGGTGCAATT+TGG	0.269114	4_4:-49342665	None:intergenic
GTGGAAGAGGACCAAGTATA+TGG	0.292452	4_4:+49341996	Msa0685240:CDS
GAACTTTGCTTCAAAACATT+TGG	0.292593	4_4:+49342536	Msa0685240:CDS
ATCACTTGAGGAATCACTTA+TGG	0.300312	4_4:+49343701	Msa0685240:CDS
ATTTCCAGGTTGCTTCAAAT+TGG	0.303894	4_4:+49343410	Msa0685240:intron
CAACAACCTCATTAATGAAT+TGG	0.310357	4_4:+49342225	Msa0685240:CDS
TGATAATGTGCAACTAAATA+AGG	0.310787	4_4:-49342698	None:intergenic
TTATAGGTTTATGGATCCTT+TGG	0.340245	4_4:+49342970	Msa0685240:intron
TGCAAATAGGTTCATTGAAT+AGG	0.340286	4_4:+49341900	Msa0685240:CDS
AAGGGTTATACTGTGAGATT+TGG	0.344341	4_4:+49343938	Msa0685240:CDS
CGAGCTACAGACTTTATGTT+TGG	0.352239	4_4:+49342860	Msa0685240:CDS
GTGCCAAATATGAAGCCTTC+TGG	0.353921	4_4:-49341932	None:intergenic
TTTCAGTAATATAAATTAAA+GGG	0.356229	4_4:-49343495	None:intergenic
AACACTGCACCATTGCAAAT+AGG	0.356617	4_4:+49341887	Msa0685240:CDS
AAACTGCAGAAAAGATTTCC+AGG	0.361097	4_4:+49342505	Msa0685240:intron
CTATATTATCTATATGTAAT+TGG	0.369294	4_4:+49344184	Msa0685240:three_prime_UTR
AGATAACAAACTTGATATAA+AGG	0.370220	4_4:+49342829	Msa0685240:CDS
CCTCCACTTAGTTTCCCATC+TGG	0.378131	4_4:-49342175	None:intergenic
CAAACTCTAGAAGATGAATA+TGG	0.381482	4_4:+49342374	Msa0685240:CDS
AAAGTATCAAATCTCTCAAA+AGG	0.385620	4_4:+49342760	Msa0685240:CDS
CTCCACTTAGTTTCCCATCT+GGG	0.388126	4_4:-49342174	None:intergenic
ATCTCTCAAAAGGGTGTGAT+AGG	0.391503	4_4:+49342770	Msa0685240:CDS
TGCCAAATATGAAGCCTTCT+GGG	0.396330	4_4:-49341931	None:intergenic
TATTCATCTTCTAGAGTTTG+AGG	0.401353	4_4:-49342371	None:intergenic
CACTTGCTGCACCTTCATAC+TGG	0.408734	4_4:-49341970	None:intergenic
ATACTTTGCATGGTCTTTGT+TGG	0.413214	4_4:+49343898	Msa0685240:CDS
AGTTTACAAAAGAGCAATCT+AGG	0.421822	4_4:+49343047	Msa0685240:CDS
AGAGAATCTGTTAGGTAGCT+AGG	0.432329	4_4:-49343157	None:intergenic
TGGTAACCTTGTTCTGACTA+AGG	0.441298	4_4:-49343023	None:intergenic
AGAAAGTCTCGAATTGCTCT+TGG	0.442143	4_4:-49343445	None:intergenic
TGACTCGTATCATCGCTATA+AGG	0.443207	4_4:+49342081	Msa0685240:CDS
ATTAATGAATTGGTGGCAAA+TGG	0.457316	4_4:+49342235	Msa0685240:CDS
CAGGGCTGGTGTAAATGTAA+AGG	0.460153	4_4:+49343874	Msa0685240:intron
AAAAGATATCAAAAGCTCTC+AGG	0.470702	4_4:+49343992	Msa0685240:CDS
GAGATTTGGAATGACCTTTG+TGG	0.477129	4_4:+49343952	Msa0685240:CDS
GGTTTGCCATTGCTCAATTG+AGG	0.479254	4_4:-49343136	None:intergenic
AGAAAGAAAGAATGAATGAA+TGG	0.479959	4_4:-49341701	None:intergenic
AGGGCTGGTGTAAATGTAAA+GGG	0.484456	4_4:+49343875	Msa0685240:intron
GCAGCAAGTGAAGGTGGAAG+AGG	0.487766	4_4:+49341983	Msa0685240:CDS
TTGCCACCAATTCATTAATG+AGG	0.489921	4_4:-49342231	None:intergenic
TAGACAACAAGAGAGAGAAT+AGG	0.490371	4_4:-49341817	None:intergenic
AACACTTACATTTAGACCAA+TGG	0.493905	4_4:-49343311	None:intergenic
CTACAGACTTTATGTTTGGA+TGG	0.494332	4_4:+49342864	Msa0685240:CDS
TCATTTATTCTATCTTAATG+AGG	0.494555	4_4:+49343752	Msa0685240:CDS
CAACCTCATTAATGAATTGG+TGG	0.495036	4_4:+49342228	Msa0685240:CDS
TAGTTACATACAATTTCAAA+TGG	0.498618	4_4:-49344164	None:intergenic
TGGGTATGCAAATGGTGAAA+TGG	0.498834	4_4:+49342613	Msa0685240:CDS
AACGAGAAAGAGAATCTGTT+AGG	0.499876	4_4:-49343165	None:intergenic
CCATGGACTTACAGTCAAGA+TGG	0.501018	4_4:+49342593	Msa0685240:CDS
ATGTGCAACTAAATAAGGTT+CGG	0.505893	4_4:-49342693	None:intergenic
AGCAAAGTTCTGCATAGTCC+TGG	0.506435	4_4:-49342523	None:intergenic
AGTCAAGATGGGTATGCAAA+TGG	0.507686	4_4:+49342605	Msa0685240:CDS
TTTATGGATCCTTTGGCCAA+TGG	0.515044	4_4:+49342977	Msa0685240:CDS
TTCATTATTACTTTAACAGA+CGG	0.521082	4_4:+49341851	Msa0685240:CDS
CATCGCTATAAGGAAGATGT+TGG	0.525320	4_4:+49342091	Msa0685240:CDS
TTCAATGAACCTATTTGCAA+TGG	0.527927	4_4:-49341896	None:intergenic
TGGAAGAGGACCAAGTATAT+GGG	0.531156	4_4:+49341997	Msa0685240:CDS
AATAGGAATGATTTCCCAGA+AGG	0.533501	4_4:+49341917	Msa0685240:CDS
GAACGTGATGGGAAAACCAT+TGG	0.535840	4_4:+49343295	Msa0685240:CDS
AAAATCACTGATGGAAACAA+TGG	0.550597	4_4:+49342046	Msa0685240:CDS
GATTCCTCAAGTGATAATGA+TGG	0.553887	4_4:-49343693	None:intergenic
TTGGAGATAGAGTAAAACAT+TGG	0.559088	4_4:+49342555	Msa0685240:CDS
TGGTCTAGAATACTCCCAGA+TGG	0.563550	4_4:+49342160	Msa0685240:CDS
GGATAATCTCCATTGGCCAA+AGG	0.565951	4_4:-49342986	None:intergenic
AAGTATCAAATCTCTCAAAA+GGG	0.567104	4_4:+49342761	Msa0685240:CDS
ATCAAAAGCTCTCAGGATTG+TGG	0.567379	4_4:+49343999	Msa0685240:CDS
GTGAAAGTATCCCATATACT+TGG	0.569026	4_4:-49342007	None:intergenic
CTCCCAGATGGGAAACTAAG+TGG	0.570318	4_4:+49342172	Msa0685240:CDS
TCTTCTGCATACCAGTATGA+AGG	0.572103	4_4:+49341959	Msa0685240:CDS
GCAAATGGTGAAATGGCACC+AGG	0.576425	4_4:+49342620	Msa0685240:CDS
CCATCTTGACTGTAAGTCCA+TGG	0.578921	4_4:-49342593	None:intergenic
GTATCACTCACATGATGAGT+GGG	0.583322	4_4:-49342409	None:intergenic
AATCATGAAGGATATGAACT+TGG	0.589040	4_4:+49342114	Msa0685240:CDS
GGAAGATGTTGGAATCATGA+AGG	0.590169	4_4:+49342102	Msa0685240:CDS
AACCAAGAAGAGCATCGACC+TGG	0.592148	4_4:-49342638	None:intergenic
TGGTTGAATCCAAATTGCAC+CGG	0.592901	4_4:+49342656	Msa0685240:CDS
GGATAACTTTGAATGAGCCA+TGG	0.594373	4_4:+49342576	Msa0685240:CDS
AGTGGAGGAATTAATCAAGA+AGG	0.596031	4_4:+49342190	Msa0685240:CDS
GAAGGTGCAGCAAGTGAAGG+TGG	0.597164	4_4:+49341977	Msa0685240:CDS
CATGGACTTACAGTCAAGAT+GGG	0.597238	4_4:+49342594	Msa0685240:CDS
TATGAAGGTGCAGCAAGTGA+AGG	0.604375	4_4:+49341974	Msa0685240:CDS
GGTCTAGAATACTCCCAGAT+GGG	0.607544	4_4:+49342161	Msa0685240:CDS
TGATTGCAGTCGAACGTGAT+GGG	0.608979	4_4:+49343284	Msa0685240:intron
TGATCCATCATTATCACTTG+AGG	0.609826	4_4:+49343689	Msa0685240:CDS
TCAAGTTTGTTATCTGAGCG+TGG	0.612272	4_4:-49342821	None:intergenic
TGTATCACTCACATGATGAG+TGG	0.613126	4_4:-49342410	None:intergenic
GTGATTGCAGTCGAACGTGA+TGG	0.613461	4_4:+49343283	Msa0685240:intron
TTCGGTTCCAGAATCACCAC+CGG	0.620495	4_4:-49342675	None:intergenic
ATGTAAAGGGATACTTTGCA+TGG	0.626161	4_4:+49343888	Msa0685240:CDS
GATGCACCTCAATTGAGCAA+TGG	0.640414	4_4:+49343130	Msa0685240:CDS
GGGTGTGATAGGTATAACAT+TGG	0.663042	4_4:+49342781	Msa0685240:CDS
GAGCAATCTAGGCTAGTGAG+TGG	0.669773	4_4:+49343058	Msa0685240:CDS
TTGAATCCAAATTGCACCGG+TGG	0.672179	4_4:+49342659	Msa0685240:CDS
TGAGAGCCTTAGTCAGAACA+AGG	0.678452	4_4:+49343017	Msa0685240:CDS
ACTCTAGAAGATGAATATGG+CGG	0.692578	4_4:+49342377	Msa0685240:CDS
CCAGATGGGAAACTAAGTGG+AGG	0.696893	4_4:+49342175	Msa0685240:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATTATAAATTTAAATTAA+TGG	+	chr4_4:49343242-49343261	Msa0685240:intron	0.0%
!!	TTTCAGTAATATAAATTAAA+GGG	-	chr4_4:49343498-49343517	None:intergenic	10.0%
!!!	TTTTCAGTAATATAAATTAA+AGG	-	chr4_4:49343499-49343518	None:intergenic	10.0%
!!	TTAATTTATATTACTGAAAA+TGG	+	chr4_4:49343499-49343518	Msa0685240:CDS	10.0%
!!!	AATAATATTTTTTACAACTA+TGG	-	chr4_4:49344106-49344125	None:intergenic	10.0%
!!	TAACTTAGTTTAAATATTTG+TGG	+	chr4_4:49342452-49342471	Msa0685240:intron	15.0%
!!!	AATAAGCTTTATAGTTAATT+TGG	-	chr4_4:49342934-49342953	None:intergenic	15.0%
!!	TTTGTTTAATTATAGGTTTA+TGG	+	chr4_4:49342961-49342980	Msa0685240:intron	15.0%
!!	AAATCAGTAATTAATGAATT+TGG	+	chr4_4:49343380-49343399	Msa0685240:intron	15.0%
!!!	TTTCTTTTAATCTAAATACA+GGG	+	chr4_4:49343856-49343875	Msa0685240:intron	15.0%
!!!	AATTTTGTAGCATTATTAAA+TGG	-	chr4_4:49344071-49344090	None:intergenic	15.0%
!!	CTATATTATCTATATGTAAT+TGG	+	chr4_4:49344184-49344203	Msa0685240:three_prime_UTR	15.0%
!!	TTCATTATTACTTTAACAGA+CGG	+	chr4_4:49341851-49341870	Msa0685240:CDS	20.0%
!!!	ATTTGTAACTCTTTTTCATT+GGG	+	chr4_4:49342343-49342362	Msa0685240:CDS	20.0%
!!	AGATAACAAACTTGATATAA+AGG	+	chr4_4:49342829-49342848	Msa0685240:CDS	20.0%
!!!	CGATTTCTTTGTTTAATTAT+AGG	+	chr4_4:49342954-49342973	Msa0685240:intron	20.0%
!!	ATAATCAATAGATATAAAGC+AGG	-	chr4_4:49343213-49343232	None:intergenic	20.0%
!!!	TAAGTAGTTAGAAATTTTGA+GGG	-	chr4_4:49343340-49343359	None:intergenic	20.0%
!!	TTTAGACAAAACAAAATAAC+AGG	-	chr4_4:49343363-49343382	None:intergenic	20.0%
!!!	AATTTGGTTATTTTATTTCC+AGG	+	chr4_4:49343396-49343415	Msa0685240:intron	20.0%
!!	TCATTTATTCTATCTTAATG+AGG	+	chr4_4:49343752-49343771	Msa0685240:CDS	20.0%
!!!	CTTTCTTTTAATCTAAATAC+AGG	+	chr4_4:49343855-49343874	Msa0685240:intron	20.0%
!!	TAGTTACATACAATTTCAAA+TGG	-	chr4_4:49344167-49344186	None:intergenic	20.0%
!	AGAAAGAAAGAATGAATGAA+TGG	-	chr4_4:49341704-49341723	None:intergenic	25.0%
!!	CATACAGATTTTCTATATCT+TGG	+	chr4_4:49342140-49342159	Msa0685240:CDS	25.0%
!	CAATGAAAAAGAGTTACAAA+TGG	-	chr4_4:49342344-49342363	None:intergenic	25.0%
!!!	CATTTGTAACTCTTTTTCAT+TGG	+	chr4_4:49342342-49342361	Msa0685240:CDS	25.0%
!!	TGATAATGTGCAACTAAATA+AGG	-	chr4_4:49342701-49342720	None:intergenic	25.0%
!!	AAAGTATCAAATCTCTCAAA+AGG	+	chr4_4:49342760-49342779	Msa0685240:CDS	25.0%
!	AAGTATCAAATCTCTCAAAA+GGG	+	chr4_4:49342761-49342780	Msa0685240:CDS	25.0%
!!!	AGTGGTTCATTTGATTTTAT+TGG	+	chr4_4:49343076-49343095	Msa0685240:CDS	25.0%
!!	GTAAGTAGTTAGAAATTTTG+AGG	-	chr4_4:49343341-49343360	None:intergenic	25.0%
!!!	AACTTTTTCATAATGTGTGT+AGG	+	chr4_4:49343651-49343670	Msa0685240:intron	25.0%
	TTCAATGAACCTATTTGCAA+TGG	-	chr4_4:49341899-49341918	None:intergenic	30.0%
	TGCAAATAGGTTCATTGAAT+AGG	+	chr4_4:49341900-49341919	Msa0685240:CDS	30.0%
	TATCCTCAAAAAATCACTGA+TGG	+	chr4_4:49342037-49342056	Msa0685240:CDS	30.0%
!!!	TTTCCATCAGTGATTTTTTG+AGG	-	chr4_4:49342043-49342062	None:intergenic	30.0%
	AAAATCACTGATGGAAACAA+TGG	+	chr4_4:49342046-49342065	Msa0685240:CDS	30.0%
	AATCATGAAGGATATGAACT+TGG	+	chr4_4:49342114-49342133	Msa0685240:CDS	30.0%
	CAACAACCTCATTAATGAAT+TGG	+	chr4_4:49342225-49342244	Msa0685240:CDS	30.0%
!	ATTAATGAATTGGTGGCAAA+TGG	+	chr4_4:49342235-49342254	Msa0685240:CDS	30.0%
!!	TATTCATCTTCTAGAGTTTG+AGG	-	chr4_4:49342374-49342393	None:intergenic	30.0%
!	CAAACTCTAGAAGATGAATA+TGG	+	chr4_4:49342374-49342393	Msa0685240:CDS	30.0%
	GAACTTTGCTTCAAAACATT+TGG	+	chr4_4:49342536-49342555	Msa0685240:CDS	30.0%
	TTGGAGATAGAGTAAAACAT+TGG	+	chr4_4:49342555-49342574	Msa0685240:CDS	30.0%
	ATGTGCAACTAAATAAGGTT+CGG	-	chr4_4:49342696-49342715	None:intergenic	30.0%
	TTATAGGTTTATGGATCCTT+TGG	+	chr4_4:49342970-49342989	Msa0685240:intron	30.0%
!!!	GTTTTTTGGATAATCTCCAT+TGG	-	chr4_4:49342996-49343015	None:intergenic	30.0%
!	GATTGCTCTTTTGTAAACTT+TGG	-	chr4_4:49343046-49343065	None:intergenic	30.0%
	AGTTTACAAAAGAGCAATCT+AGG	+	chr4_4:49343047-49343066	Msa0685240:CDS	30.0%
	AACACTTACATTTAGACCAA+TGG	-	chr4_4:49343314-49343333	None:intergenic	30.0%
	AGCAAATCACTTTCATATCA+TGG	+	chr4_4:49343524-49343543	Msa0685240:intron	30.0%
	GTCTATTTCACTTTCTTTGA+TGG	+	chr4_4:49343813-49343832	Msa0685240:intron	30.0%
!	TTTTAATCTAAATACAGGGC+TGG	+	chr4_4:49343860-49343879	Msa0685240:intron	30.0%
!	CTTTGTTGGACAATTTTGAA+TGG	+	chr4_4:49343912-49343931	Msa0685240:CDS	30.0%
!	ACCTTTGTGGATTACAAAAA+TGG	+	chr4_4:49343965-49343984	Msa0685240:CDS	30.0%
!!	ACCATTTTTGTAATCCACAA+AGG	-	chr4_4:49343969-49343988	None:intergenic	30.0%
	AAAAGATATCAAAAGCTCTC+AGG	+	chr4_4:49343992-49344011	Msa0685240:CDS	30.0%
	GATGACGATGACAAAAACAA+GGG	-	chr4_4:49341753-49341772	None:intergenic	35.0%
!	TGATGACGATGACAAAAACA+AGG	-	chr4_4:49341754-49341773	None:intergenic	35.0%
	TAGACAACAAGAGAGAGAAT+AGG	-	chr4_4:49341820-49341839	None:intergenic	35.0%
	AATAGGAATGATTTCCCAGA+AGG	+	chr4_4:49341917-49341936	Msa0685240:CDS	35.0%
!!	GTGAAAGTATCCCATATACT+TGG	-	chr4_4:49342010-49342029	None:intergenic	35.0%
	AGTGGAGGAATTAATCAAGA+AGG	+	chr4_4:49342190-49342209	Msa0685240:CDS	35.0%
	CAACCTCATTAATGAATTGG+TGG	+	chr4_4:49342228-49342247	Msa0685240:CDS	35.0%
	TTGCCACCAATTCATTAATG+AGG	-	chr4_4:49342234-49342253	None:intergenic	35.0%
!	ACTCTAGAAGATGAATATGG+CGG	+	chr4_4:49342377-49342396	Msa0685240:CDS	35.0%
	AAACTGCAGAAAAGATTTCC+AGG	+	chr4_4:49342505-49342524	Msa0685240:intron	35.0%
	CTACAGACTTTATGTTTGGA+TGG	+	chr4_4:49342864-49342883	Msa0685240:CDS	35.0%
!!!	ACTAAGGCTCTCATGTTTTT+TGG	-	chr4_4:49343010-49343029	None:intergenic	35.0%
	AACGAGAAAGAGAATCTGTT+AGG	-	chr4_4:49343168-49343187	None:intergenic	35.0%
	GCAATCACACACACAAAAAA+TGG	-	chr4_4:49343271-49343290	None:intergenic	35.0%
	ATTTCCAGGTTGCTTCAAAT+TGG	+	chr4_4:49343410-49343429	Msa0685240:intron	35.0%
	TGATCCATCATTATCACTTG+AGG	+	chr4_4:49343689-49343708	Msa0685240:CDS	35.0%
!	GATTCCTCAAGTGATAATGA+TGG	-	chr4_4:49343696-49343715	None:intergenic	35.0%
	ATCACTTGAGGAATCACTTA+TGG	+	chr4_4:49343701-49343720	Msa0685240:CDS	35.0%
	ATGTAAAGGGATACTTTGCA+TGG	+	chr4_4:49343888-49343907	Msa0685240:CDS	35.0%
	ATACTTTGCATGGTCTTTGT+TGG	+	chr4_4:49343898-49343917	Msa0685240:CDS	35.0%
!	GACAATTTTGAATGGCACAA+GGG	+	chr4_4:49343920-49343939	Msa0685240:CDS	35.0%
	AAGGGTTATACTGTGAGATT+TGG	+	chr4_4:49343938-49343957	Msa0685240:CDS	35.0%
	AACACTGCACCATTGCAAAT+AGG	+	chr4_4:49341887-49341906	Msa0685240:CDS	40.0%
	TTCCCAGAAGGCTTCATATT+TGG	+	chr4_4:49341929-49341948	Msa0685240:CDS	40.0%
	TGCCAAATATGAAGCCTTCT+GGG	-	chr4_4:49341934-49341953	None:intergenic	40.0%
	TCTTCTGCATACCAGTATGA+AGG	+	chr4_4:49341959-49341978	Msa0685240:CDS	40.0%
	TGGAAGAGGACCAAGTATAT+GGG	+	chr4_4:49341997-49342016	Msa0685240:CDS	40.0%
	TGACTCGTATCATCGCTATA+AGG	+	chr4_4:49342081-49342100	Msa0685240:CDS	40.0%
	CATCGCTATAAGGAAGATGT+TGG	+	chr4_4:49342091-49342110	Msa0685240:CDS	40.0%
	GGAAGATGTTGGAATCATGA+AGG	+	chr4_4:49342102-49342121	Msa0685240:CDS	40.0%
	ATATAGCCATCTCATGTCAC+AGG	+	chr4_4:49342311-49342330	Msa0685240:intron	40.0%
	TGTAAACCTGTGACATGAGA+TGG	-	chr4_4:49342320-49342339	None:intergenic	40.0%
	GTATCACTCACATGATGAGT+GGG	-	chr4_4:49342412-49342431	None:intergenic	40.0%
	TGTATCACTCACATGATGAG+TGG	-	chr4_4:49342413-49342432	None:intergenic	40.0%
	GGATAACTTTGAATGAGCCA+TGG	+	chr4_4:49342576-49342595	Msa0685240:CDS	40.0%
	CATGGACTTACAGTCAAGAT+GGG	+	chr4_4:49342594-49342613	Msa0685240:CDS	40.0%
	AGTCAAGATGGGTATGCAAA+TGG	+	chr4_4:49342605-49342624	Msa0685240:CDS	40.0%
	TGGGTATGCAAATGGTGAAA+TGG	+	chr4_4:49342613-49342632	Msa0685240:CDS	40.0%
	TGGTTGAATCCAAATTGCAC+CGG	+	chr4_4:49342656-49342675	Msa0685240:CDS	40.0%
!	ATCTCTCAAAAGGGTGTGAT+AGG	+	chr4_4:49342770-49342789	Msa0685240:CDS	40.0%
	GGGTGTGATAGGTATAACAT+TGG	+	chr4_4:49342781-49342800	Msa0685240:CDS	40.0%
!!	TCAAGTTTGTTATCTGAGCG+TGG	-	chr4_4:49342824-49342843	None:intergenic	40.0%
	CGAGCTACAGACTTTATGTT+TGG	+	chr4_4:49342860-49342879	Msa0685240:CDS	40.0%
	TTTATGGATCCTTTGGCCAA+TGG	+	chr4_4:49342977-49342996	Msa0685240:CDS	40.0%
	TGGTAACCTTGTTCTGACTA+AGG	-	chr4_4:49343026-49343045	None:intergenic	40.0%
	AGAGAATCTGTTAGGTAGCT+AGG	-	chr4_4:49343160-49343179	None:intergenic	40.0%
!	ACAACCAATTTGAAGCAACC+TGG	-	chr4_4:49343417-49343436	None:intergenic	40.0%
	AGAAAGTCTCGAATTGCTCT+TGG	-	chr4_4:49343448-49343467	None:intergenic	40.0%
!	AGGGCTGGTGTAAATGTAAA+GGG	+	chr4_4:49343875-49343894	Msa0685240:intron	40.0%
!	GGACAATTTTGAATGGCACA+AGG	+	chr4_4:49343919-49343938	Msa0685240:CDS	40.0%
!	GAGATTTGGAATGACCTTTG+TGG	+	chr4_4:49343952-49343971	Msa0685240:CDS	40.0%
	ATCAAAAGCTCTCAGGATTG+TGG	+	chr4_4:49343999-49344018	Msa0685240:CDS	40.0%
	CGATGACAAAAACAAGGGTG+CGG	-	chr4_4:49341748-49341767	None:intergenic	45.0%
	GTGCCAAATATGAAGCCTTC+TGG	-	chr4_4:49341935-49341954	None:intergenic	45.0%
!	TATGAAGGTGCAGCAAGTGA+AGG	+	chr4_4:49341974-49341993	Msa0685240:CDS	45.0%
	GTGGAAGAGGACCAAGTATA+TGG	+	chr4_4:49341996-49342015	Msa0685240:CDS	45.0%
!	TGGTCTAGAATACTCCCAGA+TGG	+	chr4_4:49342160-49342179	Msa0685240:CDS	45.0%
!	GGTCTAGAATACTCCCAGAT+GGG	+	chr4_4:49342161-49342180	Msa0685240:CDS	45.0%
	CTCCACTTAGTTTCCCATCT+GGG	-	chr4_4:49342177-49342196	None:intergenic	45.0%
	AGCAAAGTTCTGCATAGTCC+TGG	-	chr4_4:49342526-49342545	None:intergenic	45.0%
	CCATCTTGACTGTAAGTCCA+TGG	-	chr4_4:49342596-49342615	None:intergenic	45.0%
	CCATGGACTTACAGTCAAGA+TGG	+	chr4_4:49342593-49342612	Msa0685240:CDS	45.0%
	TTGAATCCAAATTGCACCGG+TGG	+	chr4_4:49342659-49342678	Msa0685240:CDS	45.0%
	GGATAATCTCCATTGGCCAA+AGG	-	chr4_4:49342989-49343008	None:intergenic	45.0%
	TGAGAGCCTTAGTCAGAACA+AGG	+	chr4_4:49343017-49343036	Msa0685240:CDS	45.0%
	GATGCACCTCAATTGAGCAA+TGG	+	chr4_4:49343130-49343149	Msa0685240:CDS	45.0%
	GGTTTGCCATTGCTCAATTG+AGG	-	chr4_4:49343139-49343158	None:intergenic	45.0%
	TGATTGCAGTCGAACGTGAT+GGG	+	chr4_4:49343284-49343303	Msa0685240:intron	45.0%
!	GAACGTGATGGGAAAACCAT+TGG	+	chr4_4:49343295-49343314	Msa0685240:CDS	45.0%
!	CAGGGCTGGTGTAAATGTAA+AGG	+	chr4_4:49343874-49343893	Msa0685240:intron	45.0%
!	CACTTGCTGCACCTTCATAC+TGG	-	chr4_4:49341973-49341992	None:intergenic	50.0%
	CTCCCAGATGGGAAACTAAG+TGG	+	chr4_4:49342172-49342191	Msa0685240:CDS	50.0%
	CCTCCACTTAGTTTCCCATC+TGG	-	chr4_4:49342178-49342197	None:intergenic	50.0%
	CCAGATGGGAAACTAAGTGG+AGG	+	chr4_4:49342175-49342194	Msa0685240:CDS	50.0%
	GCAAATGGTGAAATGGCACC+AGG	+	chr4_4:49342620-49342639	Msa0685240:CDS	50.0%
!!	AACCAAGAAGAGCATCGACC+TGG	-	chr4_4:49342641-49342660	None:intergenic	50.0%
	GAATCACCACCGGTGCAATT+TGG	-	chr4_4:49342668-49342687	None:intergenic	50.0%
!	AATTGCACCGGTGGTGATTC+TGG	+	chr4_4:49342668-49342687	Msa0685240:CDS	50.0%
	TTCGGTTCCAGAATCACCAC+CGG	-	chr4_4:49342678-49342697	None:intergenic	50.0%
	GAGCAATCTAGGCTAGTGAG+TGG	+	chr4_4:49343058-49343077	Msa0685240:CDS	50.0%
	GTGATTGCAGTCGAACGTGA+TGG	+	chr4_4:49343283-49343302	Msa0685240:intron	50.0%
!	GAAGGTGCAGCAAGTGAAGG+TGG	+	chr4_4:49341977-49341996	Msa0685240:CDS	55.0%
	GCAGCAAGTGAAGGTGGAAG+AGG	+	chr4_4:49341983-49342002	Msa0685240:CDS	55.0%
	CACCAGGTCGATGCTCTTCT+TGG	+	chr4_4:49342636-49342655	Msa0685240:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	49341700	49344209	49341700	ID=Msa0685240;Name=Msa0685240
chr4_4	mRNA	49341700	49344209	49341700	ID=Msa0685240-mRNA-1;Parent=Msa0685240;Name=Msa0685240-mRNA-1;_AED=0.11;_eAED=0.11;_QI=106\|1\|1\|1\|1\|1\|8\|134\|523
chr4_4	exon	49341700	49342256	49341700	ID=Msa0685240-mRNA-1:exon:12382;Parent=Msa0685240-mRNA-1
chr4_4	exon	49342333	49342420	49342333	ID=Msa0685240-mRNA-1:exon:12383;Parent=Msa0685240-mRNA-1
chr4_4	exon	49342514	49342885	49342514	ID=Msa0685240-mRNA-1:exon:12384;Parent=Msa0685240-mRNA-1
chr4_4	exon	49342976	49343193	49342976	ID=Msa0685240-mRNA-1:exon:12385;Parent=Msa0685240-mRNA-1
chr4_4	exon	49343293	49343324	49343293	ID=Msa0685240-mRNA-1:exon:12386;Parent=Msa0685240-mRNA-1
chr4_4	exon	49343418	49343520	49343418	ID=Msa0685240-mRNA-1:exon:12387;Parent=Msa0685240-mRNA-1
chr4_4	exon	49343673	49343781	49343673	ID=Msa0685240-mRNA-1:exon:12388;Parent=Msa0685240-mRNA-1
chr4_4	exon	49343877	49344209	49343877	ID=Msa0685240-mRNA-1:exon:12389;Parent=Msa0685240-mRNA-1
chr4_4	five_prime_UTR	49341700	49341805	49341700	ID=Msa0685240-mRNA-1:five_prime_utr;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49341806	49342256	49341806	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49342333	49342420	49342333	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49342514	49342885	49342514	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49342976	49343193	49342976	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49343293	49343324	49343293	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49343418	49343520	49343418	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49343673	49343781	49343673	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	CDS	49343877	49344075	49343877	ID=Msa0685240-mRNA-1:cds;Parent=Msa0685240-mRNA-1
chr4_4	three_prime_UTR	49344076	49344209	49344076	ID=Msa0685240-mRNA-1:three_prime_utr;Parent=Msa0685240-mRNA-1

Gene Sequence

>Msa0685240

ATGAGATATTTCCTATTCTCTCTCTTGTTGTCTATAGTTTCAACATTCATTATTACTTTAACAGACGGTAAAGAAATAATTAACACTGCACCATTGCAAATAGGTTCATTGAATAGGAATGATTTCCCAGAAGGCTTCATATTTGGCACAGCATCTTCTGCATACCAGTATGAAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACTTTCACTCATAGATATCCTCAAAAAATCACTGATGGAAACAATGGAGACGTTGCAGTTGACTCGTATCATCGCTATAAGGAAGATGTTGGAATCATGAAGGATATGAACTTGGATGCATACAGATTTTCTATATCTTGGTCTAGAATACTCCCAGATGGGAAACTAAGTGGAGGAATTAATCAAGAAGGAATCGACTATTACAACAACCTCATTAATGAATTGGTGGCAAATGGTTTACAACCATTTGTAACTCTTTTTCATTGGGATCTTCCTCAAACTCTAGAAGATGAATATGGCGGTTTCTTAAGCCCACTCATCATAAAAGATTTCCAGGACTATGCAGAACTTTGCTTCAAAACATTTGGAGATAGAGTAAAACATTGGATAACTTTGAATGAGCCATGGACTTACAGTCAAGATGGGTATGCAAATGGTGAAATGGCACCAGGTCGATGCTCTTCTTGGTTGAATCCAAATTGCACCGGTGGTGATTCTGGAACCGAACCTTATTTAGTTGCACATTATCAACTTCTAGCTCATGCAGCAGTTGTTAATTTATACAAGACAAAGTATCAAATCTCTCAAAAGGGTGTGATAGGTATAACATTGGTCATAAACTATTTTGTGCCACGCTCAGATAACAAACTTGATATAAAGGCTGCTGAACGAGCTACAGACTTTATGTTTGGATGGTTTATGGATCCTTTGGCCAATGGAGATTATCCAAAAAACATGAGAGCCTTAGTCAGAACAAGGTTACCAAAGTTTACAAAAGAGCAATCTAGGCTAGTGAGTGGTTCATTTGATTTTATTGGCATAAATTACTACTCTTCATGTTATGCTTCTGATGCACCTCAATTGAGCAATGGCAAACCTAGCTACCTAACAGATTCTCTTTCTCGTTTTTCATTCGAACGTGATGGGAAAACCATTGGTCTAAATGTTGCTTCAAATTGGTTGTATGTTTATCCAAGAGCAATTCGAGACTTTCTCATACAAGTTAAAGAAAAATACAACAACCCTTTAATTTATATTACTGAAAATGGTATTAATGAGTACGATGATCCATCATTATCACTTGAGGAATCACTTATGGATACTTATAGAGTTGATTATCATTATCGTCATTTATTCTATCTTAATGAGGCAATCAAGGCTGGTGTAAATGTAAAGGGATACTTTGCATGGTCTTTGTTGGACAATTTTGAATGGCACAAGGGTTATACTGTGAGATTTGGAATGACCTTTGTGGATTACAAAAATGGTTTGAAAAGATATCAAAAGCTCTCAGGATTGTGGTTCAAGAATTTTCTCACATCAGAGAACAAAAAAGTTTACATAGATTCCATTTAA

Protein sequence

>Msa0685240

MRYFLFSLLLSIVSTFIITLTDGKEIINTAPLQIGSLNRNDFPEGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPQKITDGNNGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRILPDGKLSGGINQEGIDYYNNLINELVANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKHWITLNEPWTYSQDGYANGEMAPGRCSSWLNPNCTGGDSGTEPYLVAHYQLLAHAAVVNLYKTKYQISQKGVIGITLVINYFVPRSDNKLDIKAAERATDFMFGWFMDPLANGDYPKNMRALVRTRLPKFTKEQSRLVSGSFDFIGINYYSSCYASDAPQLSNGKPSYLTDSLSRFSFERDGKTIGLNVASNWLYVYPRAIRDFLIQVKEKYNNPLIYITENGINEYDDPSLSLEESLMDTYRVDYHYRHLFYLNEAIKAGVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFKNFLTSENKKVYIDSI*