Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667110 | XP_003604568.1 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667110 | sp|P46300|RS4_SOLTU | 91.288 | 264 | 23 | 0 | 1 | 264 | 1 | 264 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667110 | G7JLT2 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0116600 | Msa0667110 | 0.810845 | 9.412222e-51 | -8.615850e-47 |
| Msa0602900 | Msa0667110 | 0.802372 | 5.787934e-49 | -8.615850e-47 |
| Msa0629280 | Msa0667110 | 0.862154 | 6.196297e-64 | -8.615850e-47 |
| Msa0667110 | Msa0694400 | 0.812003 | 5.273973e-51 | -8.615850e-47 |
| Msa0667110 | Msa0708630 | 0.803646 | 3.156720e-49 | -8.615850e-47 |
| Msa0667110 | Msa0929700 | 0.804937 | 1.699503e-49 | -8.615850e-47 |
| Msa0667110 | Msa0930360 | 0.822908 | 1.841881e-53 | -8.615850e-47 |
| Msa0667110 | Msa0930790 | 0.804870 | 1.754996e-49 | -8.615850e-47 |
| Msa0667110 | Msa1126690 | 0.809436 | 1.893918e-50 | -8.615850e-47 |
| Msa0667110 | Msa1296090 | 0.800820 | 1.204404e-48 | -8.615850e-47 |
| Msa0667110 | Msa1385480 | 0.812108 | 5.004322e-51 | -8.615850e-47 |
| Msa0667110 | Msa1413570 | 0.804601 | 1.997857e-49 | -8.615850e-47 |
| Msa0132460 | Msa0667110 | 0.801254 | 9.819042e-49 | -8.615850e-47 |
| Msa0182050 | Msa0667110 | 0.807696 | 4.456152e-50 | -8.615850e-47 |
| Msa0192300 | Msa0667110 | 0.837726 | 4.385435e-57 | -8.615850e-47 |
| Msa0482560 | Msa0667110 | 0.803301 | 3.720935e-49 | -8.615850e-47 |
| Msa0270160 | Msa0667110 | 0.806290 | 8.838618e-50 | -8.615850e-47 |
| Msa0301250 | Msa0667110 | 0.838459 | 2.840097e-57 | -8.615850e-47 |
| Msa0313060 | Msa0667110 | 0.824714 | 6.949343e-54 | -8.615850e-47 |
| Msa0563540 | Msa0667110 | 0.933850 | 9.996114e-96 | -8.615850e-47 |
| Msa0573550 | Msa0667110 | 0.816554 | 5.208367e-52 | -8.615850e-47 |
| Msa0578010 | Msa0667110 | 0.804493 | 2.103918e-49 | -8.615850e-47 |
| Msa0589160 | Msa0667110 | 0.935805 | 4.752114e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667110 | MtrunA17_Chr4g0005611 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Msa0667110 | MtrunA17_Chr7g0243211 | 96.863 | 255 | 8 | 0 | 1 | 255 | 1 | 255 | 0.0 | 510 |
| Msa0667110 | MtrunA17_Chr5g0403311 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| Msa0667110 | MtrunA17_Chr8g0357951 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0667110 | AT2G17360.1 | 91.188 | 261 | 23 | 0 | 1 | 261 | 1 | 261 | 0.0 | 507 |
| Msa0667110 | AT5G07090.1 | 90.840 | 262 | 24 | 0 | 1 | 262 | 1 | 262 | 0.0 | 507 |
| Msa0667110 | AT5G58420.1 | 90.840 | 262 | 24 | 0 | 1 | 262 | 1 | 262 | 0.0 | 507 |
| Msa0667110 | AT5G07090.3 | 90.909 | 242 | 22 | 0 | 19 | 260 | 1 | 242 | 7.79e-170 | 469 |
| Msa0667110 | AT5G07090.2 | 90.909 | 242 | 22 | 0 | 19 | 260 | 1 | 242 | 7.79e-170 | 469 |
| Msa0667110 | AT2G17360.2 | 91.713 | 181 | 15 | 0 | 1 | 181 | 1 | 181 | 2.07e-125 | 354 |
Find 101 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTGAAAGCATGTTATT+AGG | 0.176407 | 4_4:-7346979 | Msa0667110:three_prime_UTR |
| AATTGCCTTTACAAATATTA+TGG | 0.233312 | 4_4:-7347097 | Msa0667110:three_prime_UTR |
| TTGATCCGTTGTACAAACTA+TGG | 0.301620 | 4_4:-7347006 | Msa0667110:three_prime_UTR |
| GAATTGAAAGCATGTTATTA+GGG | 0.311610 | 4_4:-7346978 | Msa0667110:three_prime_UTR |
| AAAATTTAGAAGAAAATAAT+AGG | 0.317551 | 4_4:+7347059 | None:intergenic |
| TTGTCAAGCATCCAATGTTT+TGG | 0.326410 | 4_4:+7350383 | None:intergenic |
| CTATCCAGATCCACTAATTA+AGG | 0.332244 | 4_4:-7347592 | Msa0667110:CDS |
| GACATATCCCGCTGGTTTCA+TGG | 0.336653 | 4_4:-7350090 | Msa0667110:CDS |
| CAGCGTCATGTTCTTGTTGA+TGG | 0.345107 | 4_4:-7350131 | Msa0667110:CDS |
| TTGGGCAATGTGTTTACTAT+TGG | 0.359690 | 4_4:-7347372 | Msa0667110:CDS |
| GGGAATGTTGTCATGGTTAC+CGG | 0.387189 | 4_4:-7347504 | Msa0667110:CDS |
| GCGGATGGTGCGACCATCAT+AGG | 0.388644 | 4_4:+7347614 | None:intergenic |
| TTGGCCTTAATTAGTGGATC+TGG | 0.396571 | 4_4:+7347588 | None:intergenic |
| GGTTCCGTCTCCACTCTGTC+AGG | 0.404000 | 4_4:-7349897 | Msa0667110:CDS |
| TTCCGCCGTGGGTGGGTGGG+TGG | 0.404316 | 4_4:+7351810 | None:intergenic |
| GACTTGTGGGGTCCAGATGA+TGG | 0.410304 | 4_4:+7350239 | None:intergenic |
| CATGAGTTTGCCACTCGGTT+GGG | 0.410419 | 4_4:-7347390 | Msa0667110:CDS |
| GTGTCATTGGCCTTAATTAG+TGG | 0.410495 | 4_4:+7347582 | None:intergenic |
| CGTTGTACAAACTATGGTTA+AGG | 0.431216 | 4_4:-7347000 | Msa0667110:three_prime_UTR |
| TGGGGTCCAGATGATGGCTT+TGG | 0.432297 | 4_4:+7350245 | None:intergenic |
| TCTAATATATTTCAGGCAAG+AGG | 0.436290 | 4_4:-7350437 | Msa0667110:intron |
| GTCAAGCTTGATGGTGTCAT+TGG | 0.437148 | 4_4:+7347569 | None:intergenic |
| TGAGTTCCGCCGTGGGTGGG+TGG | 0.438905 | 4_4:+7351806 | None:intergenic |
| CATTGGATGCTTGACAAACT+TGG | 0.449684 | 4_4:-7350377 | Msa0667110:CDS |
| AAGGCACTCCCTTGACTTGT+GGG | 0.458121 | 4_4:+7350226 | None:intergenic |
| AAAGTTCGATCTGTTCAATT+CGG | 0.459883 | 4_4:-7347663 | Msa0667110:CDS |
| TCCGCCGTGGGTGGGTGGGT+GGG | 0.463063 | 4_4:+7351811 | None:intergenic |
| GAGTTCCGCCGTGGGTGGGT+GGG | 0.468937 | 4_4:+7351807 | None:intergenic |
| GAGATGAGTTCCGCCGTGGG+TGG | 0.469595 | 4_4:+7351802 | None:intergenic |
| CAGGCACCAAAGCCATCATC+TGG | 0.471057 | 4_4:-7350251 | Msa0667110:CDS |
| TCATGAGTTTGCCACTCGGT+TGG | 0.474930 | 4_4:-7347391 | Msa0667110:CDS |
| CATATTTCAGTCTGTTTCGC+AGG | 0.481155 | 4_4:+7350189 | None:intergenic |
| TCAGTCTGTTTCGCAGGATG+AGG | 0.485002 | 4_4:+7350195 | None:intergenic |
| CAAGAACAGAGAGAAACATA+AGG | 0.485349 | 4_4:-7347451 | Msa0667110:CDS |
| ACCATCATAGGTGTTCAGAT+AGG | 0.491470 | 4_4:+7347626 | None:intergenic |
| ATCTGTTCAATTCGGACAGA+AGG | 0.492212 | 4_4:-7347655 | Msa0667110:CDS |
| TTCTTGTTGATGGCAAGGTT+AGG | 0.493369 | 4_4:-7350121 | Msa0667110:CDS |
| CCGTTGCGTGATGTTTAACA+TGG | 0.493445 | 4_4:-7347031 | Msa0667110:three_prime_UTR |
| CCCTATCTGAACACCTATGA+TGG | 0.494508 | 4_4:-7347627 | Msa0667110:CDS |
| ACATATCCCGCTGGTTTCAT+GGG | 0.495686 | 4_4:-7350089 | Msa0667110:intron |
| GTATCTCTTCCCAAGGGAAA+AGG | 0.504057 | 4_4:-7347330 | Msa0667110:CDS |
| TTGGCAAGGGAACAAAGCCT+TGG | 0.509969 | 4_4:-7347353 | Msa0667110:CDS |
| GAAGGCACTCCCTTGACTTG+TGG | 0.511811 | 4_4:+7350225 | None:intergenic |
| CAAGTTGACTGTTATTGAAG+AGG | 0.512862 | 4_4:-7347304 | Msa0667110:CDS |
| GACTCAATGCTCCAAAACAT+TGG | 0.516338 | 4_4:-7350394 | Msa0667110:CDS |
| AGATGAGTTCCGCCGTGGGT+GGG | 0.518047 | 4_4:+7351803 | None:intergenic |
| TGTCACCATAATATTTGTAA+AGG | 0.520224 | 4_4:+7347092 | None:intergenic |
| CCATCATAGGTGTTCAGATA+GGG | 0.524783 | 4_4:+7347627 | None:intergenic |
| CAATGTGTTTACTATTGGCA+AGG | 0.529290 | 4_4:-7347367 | Msa0667110:CDS |
| TCATGTTCTTGTTGATGGCA+AGG | 0.537954 | 4_4:-7350126 | Msa0667110:CDS |
| TGAAGAGGCTAGAAAGAGGC+AGG | 0.540159 | 4_4:-7347289 | Msa0667110:CDS |
| CATCTGGACCCCACAAGTCA+AGG | 0.541796 | 4_4:-7350235 | Msa0667110:CDS |
| CTAATATATTTCAGGCAAGA+GGG | 0.544568 | 4_4:-7350436 | Msa0667110:intron |
| TGGCAAGGGAACAAAGCCTT+GGG | 0.546208 | 4_4:-7347352 | Msa0667110:CDS |
| ACGACCTCTATTCCTTCCTC+CGG | 0.553480 | 4_4:+7347485 | None:intergenic |
| AAGAACAGAGAGAAACATAA+GGG | 0.554158 | 4_4:-7347450 | Msa0667110:CDS |
| GCCTTGGGTATCTCTTCCCA+AGG | 0.555309 | 4_4:-7347337 | Msa0667110:CDS |
| TGATGTGGGGAATGTTGTCA+TGG | 0.557070 | 4_4:-7347511 | Msa0667110:CDS |
| TGAACCCACCCACCCACCCA+CGG | 0.561542 | 4_4:-7351815 | Msa0667110:five_prime_UTR |
| GTTCCGTCTCCACTCTGTCA+GGG | 0.573710 | 4_4:-7349896 | Msa0667110:CDS |
| AACATGACGCTGCATCAAGA+TGG | 0.573994 | 4_4:+7350142 | None:intergenic |
| GACCACTTGCATCCTGAACA+TGG | 0.574639 | 4_4:+7347412 | None:intergenic |
| CATCCCTGACAGAGTGGAGA+CGG | 0.578629 | 4_4:+7349893 | None:intergenic |
| CACATACCCATGAAACCAGC+GGG | 0.579767 | 4_4:+7350083 | None:intergenic |
| GTGGAGACGGAACCGACCCT+TGG | 0.581652 | 4_4:+7349906 | None:intergenic |
| CCACTCTGTCAGGGATGATG+AGG | 0.582420 | 4_4:-7349887 | Msa0667110:CDS |
| TTGTCATGGTTACCGGAGGA+AGG | 0.582711 | 4_4:-7347497 | Msa0667110:CDS |
| TGGATGCTTGACAAACTTGG+TGG | 0.583185 | 4_4:-7350374 | Msa0667110:CDS |
| TGTCAGGGATGATGAGGCAA+AGG | 0.594932 | 4_4:-7349881 | Msa0667110:intron |
| ATCAGAGATGAGTTCCGCCG+TGG | 0.595126 | 4_4:+7351798 | None:intergenic |
| ATCTGGACCCCACAAGTCAA+GGG | 0.597269 | 4_4:-7350234 | Msa0667110:CDS |
| TCTGTTCAATTCGGACAGAA+GGG | 0.598687 | 4_4:-7347654 | Msa0667110:CDS |
| AGGCACTCCCTTGACTTGTG+GGG | 0.598802 | 4_4:+7350227 | None:intergenic |
| GTTACCGGAGGAAGGAATAG+AGG | 0.602203 | 4_4:-7347489 | Msa0667110:CDS |
| TTTCGCAGGATGAGGATCAA+AGG | 0.605453 | 4_4:+7350203 | None:intergenic |
| CGTCTTCTGTATGACACCAA+GGG | 0.605611 | 4_4:-7349922 | Msa0667110:CDS |
| TTATTGAAGAGGCTAGAAAG+AGG | 0.605630 | 4_4:-7347293 | Msa0667110:CDS |
| CCGTCTTCTGTATGACACCA+AGG | 0.606098 | 4_4:-7349923 | Msa0667110:CDS |
| CCTTGGTGTCATACAGAAGA+CGG | 0.610727 | 4_4:+7349923 | None:intergenic |
| AATGTGTTTACTATTGGCAA+GGG | 0.614045 | 4_4:-7347366 | Msa0667110:CDS |
| CCTCATCATCCCTGACAGAG+TGG | 0.614659 | 4_4:+7349887 | None:intergenic |
| GGAAGGAATAGAGGTCGTGT+TGG | 0.618743 | 4_4:-7347480 | Msa0667110:CDS |
| GTGGTCATGAGTTTGCCACT+CGG | 0.619011 | 4_4:-7347395 | Msa0667110:CDS |
| CTTAACCATAGTTTGTACAA+CGG | 0.622570 | 4_4:+7347001 | None:intergenic |
| CAAAAGGTAACGAACCATGT+TGG | 0.626237 | 4_4:+7351757 | None:intergenic |
| TTCTGTATGACACCAAGGGT+CGG | 0.629625 | 4_4:-7349918 | Msa0667110:CDS |
| TAGTGGATCTGGATAGCGGA+TGG | 0.630246 | 4_4:+7347599 | None:intergenic |
| TCAGAGATGAGTTCCGCCGT+GGG | 0.640304 | 4_4:+7351799 | None:intergenic |
| AATTGAAAGCATGTTATTAG+GGG | 0.644736 | 4_4:-7346977 | None:intergenic |
| GCAGGATGAGGATCAAAGGA+AGG | 0.644782 | 4_4:+7350207 | None:intergenic |
| TAATTAGTGGATCTGGATAG+CGG | 0.647434 | 4_4:+7347595 | None:intergenic |
| ATCCATGTTCAGGATGCAAG+TGG | 0.648183 | 4_4:-7347414 | Msa0667110:CDS |
| CCATGTTAAACATCACGCAA+CGG | 0.648515 | 4_4:+7347031 | None:intergenic |
| CCCTTGGGAAGAGATACCCA+AGG | 0.659442 | 4_4:+7347336 | None:intergenic |
| CCTTGGGTATCTCTTCCCAA+GGG | 0.683663 | 4_4:-7347336 | Msa0667110:CDS |
| ACAGACAAGACATATCCCGC+TGG | 0.683859 | 4_4:-7350098 | Msa0667110:CDS |
| AATGTTGTCATGGTTACCGG+AGG | 0.684540 | 4_4:-7347501 | Msa0667110:CDS |
| GCACATACCCATGAAACCAG+CGG | 0.695365 | 4_4:+7350082 | None:intergenic |
| ACCCACCCACCCACCCACGG+CGG | 0.705234 | 4_4:-7351812 | Msa0667110:five_prime_UTR |
| AAACACATTGCCCAACCGAG+TGG | 0.706925 | 4_4:+7347380 | None:intergenic |
| TTCAGCACAAGACTCCAACA+TGG | 0.710792 | 4_4:-7351771 | Msa0667110:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAATAAAAAAAA+GGG | + | chr4_4:7351631-7351650 | None:intergenic | 0.0% |
| !! | ATAAAAAAAAAATAAAAAAA+AGG | + | chr4_4:7351632-7351651 | None:intergenic | 0.0% |
| !!! | ATGTTTTTCAATAAAAAAAA+AGG | - | chr4_4:7347169-7347188 | Msa0667110:three_prime_UTR | 10.0% |
| !! | AAAATTTAGAAGAAAATAAT+AGG | + | chr4_4:7351743-7351762 | None:intergenic | 10.0% |
| !! | AAAATGTATCATAAAATCTA+GGG | + | chr4_4:7348237-7348256 | None:intergenic | 15.0% |
| !! | TAAAATGTATCATAAAATCT+AGG | + | chr4_4:7348238-7348257 | None:intergenic | 15.0% |
| !! | TAGTTATAAATTAGAATATG+AGG | + | chr4_4:7348341-7348360 | None:intergenic | 15.0% |
| !! | TTAGAAAAAAATTAATCAGT+GGG | + | chr4_4:7348805-7348824 | None:intergenic | 15.0% |
| !! | ATTAGAAAAAAATTAATCAG+TGG | + | chr4_4:7348806-7348825 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAATACAAG+GGG | + | chr4_4:7348995-7349014 | None:intergenic | 15.0% |
| !! | GCAAAAAAAAAAAAATACAA+GGG | + | chr4_4:7348996-7349015 | None:intergenic | 15.0% |
| !! | TGCAAAAAAAAAAAAATACA+AGG | + | chr4_4:7348997-7349016 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr4_4:7350124-7350143 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr4_4:7350123-7350142 | Msa0667110:CDS | 15.0% |
| !!! | TTTCTTATATTCTTTCATTT+TGG | - | chr4_4:7351098-7351117 | Msa0667110:intron | 15.0% |
| !! | CAATAAAAAAAAAGGTTTGA+TGG | - | chr4_4:7347177-7347196 | Msa0667110:three_prime_UTR | 20.0% |
| !! | TCATGTTATGTTATAACATA+TGG | - | chr4_4:7347219-7347238 | Msa0667110:three_prime_UTR | 20.0% |
| !!! | TCAAACAAGGTTTATTATTT+TGG | - | chr4_4:7347709-7347728 | Msa0667110:intron | 20.0% |
| !!! | CAAACAAGGTTTATTATTTT+GGG | - | chr4_4:7347710-7347729 | Msa0667110:intron | 20.0% |
| !! | CAAAAATCAAGAAATCTTTA+TGG | + | chr4_4:7347778-7347797 | None:intergenic | 20.0% |
| !! | TCTTTCATTGAAAACATTTA+TGG | + | chr4_4:7347976-7347995 | None:intergenic | 20.0% |
| !!! | TTTTGTAACAATGTTTTCAT+TGG | - | chr4_4:7348273-7348292 | Msa0667110:intron | 20.0% |
| !! | TAACTACTCTAATATATTTC+AGG | - | chr4_4:7348355-7348374 | Msa0667110:intron | 20.0% |
| !! | CTTAAAAAGATCTTAACTTA+CGG | + | chr4_4:7349134-7349153 | None:intergenic | 20.0% |
| !! | ATTGAAATATAGTTATGGTA+AGG | + | chr4_4:7351062-7351081 | None:intergenic | 20.0% |
| !! | GAACAATTGAAATATAGTTA+TGG | + | chr4_4:7351067-7351086 | None:intergenic | 20.0% |
| !! | AATTGCCTTTACAAATATTA+TGG | - | chr4_4:7351702-7351721 | Msa0667110:intron | 20.0% |
| !!! | TCTAATTATTCTGGAACAAA+GGG | + | chr4_4:7347514-7347533 | None:intergenic | 25.0% |
| ! | CACTATTCACATAATATACT+TGG | + | chr4_4:7347682-7347701 | None:intergenic | 25.0% |
| !!! | TGATTTTTGAAATGCAATCT+TGG | - | chr4_4:7347789-7347808 | Msa0667110:intron | 25.0% |
| !! | TTTTTATGTTTCAGTGAGTT+TGG | - | chr4_4:7347813-7347832 | Msa0667110:intron | 25.0% |
| !! | TTTTATGTTTCAGTGAGTTT+GGG | - | chr4_4:7347814-7347833 | Msa0667110:intron | 25.0% |
| !!! | CAACACAATTTTAGAAAACA+TGG | + | chr4_4:7347909-7347928 | None:intergenic | 25.0% |
| ! | ATAGTTATATGTTCTTGACA+TGG | - | chr4_4:7347942-7347961 | Msa0667110:intron | 25.0% |
| ! | TAGTTATATGTTCTTGACAT+GGG | - | chr4_4:7347943-7347962 | Msa0667110:intron | 25.0% |
| !! | TTCTTATTTGACCTCATATA+TGG | - | chr4_4:7348148-7348167 | Msa0667110:intron | 25.0% |
| ! | AATATAATTCAGATGAAGTG+TGG | + | chr4_4:7348471-7348490 | None:intergenic | 25.0% |
| ! | ATTGAGCATATGAATTCAAA+TGG | + | chr4_4:7348515-7348534 | None:intergenic | 25.0% |
| ! | TTTGAATTCATATGCTCAAT+TGG | - | chr4_4:7348515-7348534 | Msa0667110:intron | 25.0% |
| ! | TTAGAAATTTAACAACACTG+GGG | + | chr4_4:7348760-7348779 | None:intergenic | 25.0% |
| ! | CTTAGAAATTTAACAACACT+GGG | + | chr4_4:7348761-7348780 | None:intergenic | 25.0% |
| ! | ACTTAGAAATTTAACAACAC+TGG | + | chr4_4:7348762-7348781 | None:intergenic | 25.0% |
| !! | GTGTTGTTAAATTTCTAAGT+AGG | - | chr4_4:7348762-7348781 | Msa0667110:intron | 25.0% |
| !! | TAAATTTCTAAGTAGGCTTT+TGG | - | chr4_4:7348769-7348788 | Msa0667110:intron | 25.0% |
| !! | CGTAAGTTAAGATCTTTTTA+AGG | - | chr4_4:7349132-7349151 | Msa0667110:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr4_4:7349380-7349399 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr4_4:7349397-7349416 | Msa0667110:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr4_4:7349522-7349541 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr4_4:7350130-7350149 | Msa0667110:CDS | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr4_4:7350131-7350150 | Msa0667110:CDS | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | + | chr4_4:7350567-7350586 | None:intergenic | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | + | chr4_4:7350568-7350587 | None:intergenic | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | - | chr4_4:7350569-7350588 | Msa0667110:intron | 25.0% |
| ! | ATCCTTCATTAAATAAGTTG+TGG | - | chr4_4:7350844-7350863 | Msa0667110:intron | 25.0% |
| !! | TGATTTTATCAAGTTTGATG+TGG | - | chr4_4:7351273-7351292 | Msa0667110:intron | 25.0% |
| !! | GATTTTATCAAGTTTGATGT+GGG | - | chr4_4:7351274-7351293 | Msa0667110:intron | 25.0% |
| !! | ATTTTATCAAGTTTGATGTG+GGG | - | chr4_4:7351275-7351294 | Msa0667110:intron | 25.0% |
| !!! | AAATTGCATTTTTGTTGACT+GGG | - | chr4_4:7351570-7351589 | Msa0667110:intron | 25.0% |
| ! | TGTCACCATAATATTTGTAA+AGG | + | chr4_4:7351710-7351729 | None:intergenic | 25.0% |
| ACTCACACATGAAATTACAT+TGG | - | chr4_4:7347405-7347424 | Msa0667110:CDS | 30.0% | |
| CACATGAAATTACATTGGAT+TGG | - | chr4_4:7347410-7347429 | Msa0667110:CDS | 30.0% | |
| !! | GTCTAATTATTCTGGAACAA+AGG | + | chr4_4:7347515-7347534 | None:intergenic | 30.0% |
| GTGAAACAGTCTAATTATTC+TGG | + | chr4_4:7347523-7347542 | None:intergenic | 30.0% | |
| TAAATGTCAAAATTGCGCAT+GGG | + | chr4_4:7347551-7347570 | None:intergenic | 30.0% | |
| TTAAATGTCAAAATTGCGCA+TGG | + | chr4_4:7347552-7347571 | None:intergenic | 30.0% | |
| !!! | CAAGGTTTATTATTTTGGGA+TGG | - | chr4_4:7347714-7347733 | Msa0667110:intron | 30.0% |
| ! | CTAAAATCTCAAAGTATCCT+AGG | + | chr4_4:7347860-7347879 | None:intergenic | 30.0% |
| !!! | TGAGATTTTAGAACTTCAGA+AGG | - | chr4_4:7347869-7347888 | Msa0667110:intron | 30.0% |
| !!! | ATTTTAGAACTTCAGAAGGA+TGG | - | chr4_4:7347873-7347892 | Msa0667110:intron | 30.0% |
| AAGAATACAAGCCATATATG+AGG | + | chr4_4:7348162-7348181 | None:intergenic | 30.0% | |
| !! | ATTGGCTTTCTGTAATTGTT+AGG | - | chr4_4:7348291-7348310 | Msa0667110:intron | 30.0% |
| TCTAATATATTTCAGGCAAG+AGG | - | chr4_4:7348362-7348381 | Msa0667110:intron | 30.0% | |
| CTAATATATTTCAGGCAAGA+GGG | - | chr4_4:7348363-7348382 | Msa0667110:intron | 30.0% | |
| TGGAACATACAAATAAACAC+AGG | + | chr4_4:7348495-7348514 | None:intergenic | 30.0% | |
| ATTCATATGCTCAATTGGTT+TGG | - | chr4_4:7348520-7348539 | Msa0667110:intron | 30.0% | |
| TAGAAATTTAACAACACTGG+GGG | + | chr4_4:7348759-7348778 | None:intergenic | 30.0% | |
| TTAGGAATAGAAACAACATC+TGG | + | chr4_4:7348841-7348860 | None:intergenic | 30.0% | |
| !! | CGGAAGTTTTCATTTGTTTT+AGG | + | chr4_4:7348859-7348878 | None:intergenic | 30.0% |
| TGAAATTAGAGAGATAGTGA+AGG | + | chr4_4:7348954-7348973 | None:intergenic | 30.0% | |
| ACGATATGCATTGTTAAACA+GGG | + | chr4_4:7349052-7349071 | None:intergenic | 30.0% | |
| TCTTTGATAGAACATTATGG+TGG | + | chr4_4:7349333-7349352 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr4_4:7349336-7349355 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr4_4:7349340-7349359 | Msa0667110:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr4_4:7349375-7349394 | Msa0667110:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr4_4:7349526-7349545 | Msa0667110:intron | 30.0% |
| TTACACGGTTTAGATATCTT+GGG | + | chr4_4:7349858-7349877 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr4_4:7349861-7349880 | Msa0667110:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | + | chr4_4:7349933-7349952 | None:intergenic | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | + | chr4_4:7349953-7349972 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | chr4_4:7350112-7350131 | None:intergenic | 30.0% |
| TATTGTTATGGGAAAATCTC+CGG | - | chr4_4:7350173-7350192 | Msa0667110:CDS | 30.0% | |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr4_4:7350331-7350350 | None:intergenic | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | + | chr4_4:7350337-7350356 | None:intergenic | 30.0% |
| TTCCAATCTATAAGAACAAG+GGG | + | chr4_4:7350566-7350585 | None:intergenic | 30.0% | |
| ! | AACTTTTCAACGAGATTATG+AGG | + | chr4_4:7350629-7350648 | None:intergenic | 30.0% |
| GAAACTATAACTATTATCGC+CGG | + | chr4_4:7350776-7350795 | None:intergenic | 30.0% | |
| GGCGATAATAGTTATAGTTT+CGG | - | chr4_4:7350775-7350794 | Msa0667110:intron | 30.0% | |
| GTCCACAACTTATTTAATGA+AGG | + | chr4_4:7350849-7350868 | None:intergenic | 30.0% | |
| TGTCAGTATTTGTACTTCAT+AGG | - | chr4_4:7350933-7350952 | Msa0667110:intron | 30.0% | |
| GTCAGTATTTGTACTTCATA+GGG | - | chr4_4:7350934-7350953 | Msa0667110:intron | 30.0% | |
| AAAGTTCGATCTGTTCAATT+CGG | - | chr4_4:7351136-7351155 | Msa0667110:intron | 30.0% | |
| AAGAACAGAGAGAAACATAA+GGG | - | chr4_4:7351349-7351368 | Msa0667110:intron | 30.0% | |
| AATGTGTTTACTATTGGCAA+GGG | - | chr4_4:7351433-7351452 | Msa0667110:intron | 30.0% | |
| ! | CAAATTGCATTTTTGTTGAC+TGG | - | chr4_4:7351569-7351588 | Msa0667110:intron | 30.0% |
| ! | CTTAACCATAGTTTGTACAA+CGG | + | chr4_4:7351801-7351820 | None:intergenic | 30.0% |
| ! | GGAATTGAAAGCATGTTATT+AGG | - | chr4_4:7351820-7351839 | Msa0667110:five_prime_UTR | 30.0% |
| CTGAGAAATTGAAGAGCAAA+AGG | + | chr4_4:7347061-7347080 | None:intergenic | 35.0% | |
| ATGGAACTGAATAGTGTTGT+TGG | - | chr4_4:7347238-7347257 | Msa0667110:three_prime_UTR | 35.0% | |
| ! | AACTGAATAGTGTTGTTGGA+AGG | - | chr4_4:7347242-7347261 | Msa0667110:three_prime_UTR | 35.0% |
| ACAAAGGGAGTAGTAGTATA+AGG | + | chr4_4:7347499-7347518 | None:intergenic | 35.0% | |
| GTCGAGATGAATATTTCGAA+TGG | + | chr4_4:7347594-7347613 | None:intergenic | 35.0% | |
| ATAGTGCACATTGTCAAACA+AGG | - | chr4_4:7347696-7347715 | Msa0667110:intron | 35.0% | |
| ! | TGGCTTGTATTCTTTAGCTT+TGG | - | chr4_4:7348168-7348187 | Msa0667110:intron | 35.0% |
| ! | TTGTCAAGCATCCAATGTTT+TGG | + | chr4_4:7348419-7348438 | None:intergenic | 35.0% |
| TGTGGAAAATGGTCATACAA+AGG | + | chr4_4:7348453-7348472 | None:intergenic | 35.0% | |
| TTCAGATGAAGTGTGGAAAA+TGG | + | chr4_4:7348464-7348483 | None:intergenic | 35.0% | |
| GACGATATGCATTGTTAAAC+AGG | + | chr4_4:7349053-7349072 | None:intergenic | 35.0% | |
| ACAAGTCATTCGTCTATAGT+CGG | + | chr4_4:7349109-7349128 | None:intergenic | 35.0% | |
| ! | AAGTCTTGGATCTAAAGTGT+CGG | + | chr4_4:7349173-7349192 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr4_4:7349356-7349375 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr4_4:7349368-7349387 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+CGG | + | chr4_4:7349452-7349471 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr4_4:7349455-7349474 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr4_4:7349456-7349475 | Msa0667110:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr4_4:7349508-7349527 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr4_4:7349513-7349532 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr4_4:7349533-7349552 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr4_4:7349585-7349604 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr4_4:7349720-7349739 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr4_4:7349724-7349743 | Msa0667110:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr4_4:7349733-7349752 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | + | chr4_4:7349798-7349817 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+CGG | - | chr4_4:7349831-7349850 | Msa0667110:intron | 35.0% |
| GTTACACGGTTTAGATATCT+TGG | + | chr4_4:7349859-7349878 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr4_4:7349860-7349879 | Msa0667110:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr4_4:7349862-7349881 | Msa0667110:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr4_4:7349873-7349892 | None:intergenic | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | chr4_4:7349924-7349943 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | + | chr4_4:7349925-7349944 | None:intergenic | 35.0% | |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr4_4:7350066-7350085 | Msa0667110:intron | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | + | chr4_4:7350174-7350193 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr4_4:7350242-7350261 | Msa0667110:CDS | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | + | chr4_4:7350431-7350450 | None:intergenic | 35.0% |
| !!! | AACCAATTTGGTTTTATGCC+TGG | + | chr4_4:7350432-7350451 | None:intergenic | 35.0% |
| AAGAAAAGAGACTCACGTTA+CGG | + | chr4_4:7350457-7350476 | None:intergenic | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | + | chr4_4:7350496-7350515 | None:intergenic | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | + | chr4_4:7350497-7350516 | None:intergenic | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | chr4_4:7350502-7350521 | None:intergenic | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | chr4_4:7350503-7350522 | None:intergenic | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | + | chr4_4:7350538-7350557 | None:intergenic | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | + | chr4_4:7350539-7350558 | None:intergenic | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | + | chr4_4:7350565-7350584 | None:intergenic | 35.0% | |
| ATTGAAGTGTGGAAAAGTCT+TGG | + | chr4_4:7350678-7350697 | None:intergenic | 35.0% | |
| ! | AGACTTTTCCACACTTCAAT+AGG | - | chr4_4:7350678-7350697 | Msa0667110:intron | 35.0% |
| ACAACATACCTATTGAAGTG+TGG | + | chr4_4:7350689-7350708 | None:intergenic | 35.0% | |
| ACTTCAATAGGTATGTTGTC+CGG | - | chr4_4:7350690-7350709 | Msa0667110:intron | 35.0% | |
| ! | TAATTAGTGGATCTGGATAG+CGG | + | chr4_4:7351207-7351226 | None:intergenic | 35.0% |
| CTATCCAGATCCACTAATTA+AGG | - | chr4_4:7351207-7351226 | Msa0667110:intron | 35.0% | |
| !!! | CAGTGATCTTGTTGTTTTCA+AGG | + | chr4_4:7351255-7351274 | None:intergenic | 35.0% |
| CAAGAACAGAGAGAAACATA+AGG | - | chr4_4:7351348-7351367 | Msa0667110:intron | 35.0% | |
| !!! | TTTTGAGACTATCCATGTTC+AGG | - | chr4_4:7351375-7351394 | Msa0667110:intron | 35.0% |
| TTGGGCAATGTGTTTACTAT+TGG | - | chr4_4:7351427-7351446 | Msa0667110:intron | 35.0% | |
| CAATGTGTTTACTATTGGCA+AGG | - | chr4_4:7351432-7351451 | Msa0667110:intron | 35.0% | |
| ! | CAAGTTGACTGTTATTGAAG+AGG | - | chr4_4:7351495-7351514 | Msa0667110:intron | 35.0% |
| TTATTGAAGAGGCTAGAAAG+AGG | - | chr4_4:7351506-7351525 | Msa0667110:intron | 35.0% | |
| !!! | TGACTGGGAGGTTTTTTTTT+TGG | - | chr4_4:7351585-7351604 | Msa0667110:intron | 35.0% |
| TTGATCCGTTGTACAAACTA+TGG | - | chr4_4:7351793-7351812 | Msa0667110:five_prime_UTR | 35.0% | |
| CGTTGTACAAACTATGGTTA+AGG | - | chr4_4:7351799-7351818 | Msa0667110:five_prime_UTR | 35.0% | |
| CAAAAGGTAACGAACCATGT+TGG | + | chr4_4:7347045-7347064 | None:intergenic | 40.0% | |
| GTAGCTGCATTGTGCTTATT+AGG | - | chr4_4:7347101-7347120 | Msa0667110:three_prime_UTR | 40.0% | |
| ! | TCCTGCATGTTTTCAACTGT+TGG | - | chr4_4:7347271-7347290 | Msa0667110:CDS | 40.0% |
| ACCAACAGTTGAAAACATGC+AGG | + | chr4_4:7347275-7347294 | None:intergenic | 40.0% | |
| ACATCTTCAATCAGAAGGGT+AGG | + | chr4_4:7347325-7347344 | None:intergenic | 40.0% | |
| GGACACATCTTCAATCAGAA+GGG | + | chr4_4:7347329-7347348 | None:intergenic | 40.0% | |
| CTTCTGATTGAAGATGTGTC+CGG | - | chr4_4:7347328-7347347 | Msa0667110:CDS | 40.0% | |
| CAGACACTAACAATGACACA+TGG | + | chr4_4:7347374-7347393 | None:intergenic | 40.0% | |
| ! | TTTGGGATGGAGAGAGTATA+TGG | - | chr4_4:7347727-7347746 | Msa0667110:intron | 40.0% |
| ! | TTGGGATGGAGAGAGTATAT+GGG | - | chr4_4:7347728-7347747 | Msa0667110:intron | 40.0% |
| AGTATATGGGGTTGACTACA+TGG | - | chr4_4:7347741-7347760 | Msa0667110:intron | 40.0% | |
| TCAGTGAGTTTGGGTATGTT+TGG | - | chr4_4:7347823-7347842 | Msa0667110:intron | 40.0% | |
| GTTTGGAAGTCTCAATACCT+AGG | - | chr4_4:7347840-7347859 | Msa0667110:intron | 40.0% | |
| GAGCTCATCTTTATGTCCTA+GGG | - | chr4_4:7348024-7348043 | Msa0667110:intron | 40.0% | |
| TCATCTTTATGTCCTAGGGA+TGG | - | chr4_4:7348028-7348047 | Msa0667110:intron | 40.0% | |
| CATCTTTATGTCCTAGGGAT+GGG | - | chr4_4:7348029-7348048 | Msa0667110:intron | 40.0% | |
| ATCTTTATGTCCTAGGGATG+GGG | - | chr4_4:7348030-7348049 | Msa0667110:intron | 40.0% | |
| GACTCAATGCTCCAAAACAT+TGG | - | chr4_4:7348405-7348424 | Msa0667110:intron | 40.0% | |
| CATTGGATGCTTGACAAACT+TGG | - | chr4_4:7348422-7348441 | Msa0667110:intron | 40.0% | |
| CATATTTCAGTCTGTTTCGC+AGG | + | chr4_4:7348613-7348632 | None:intergenic | 40.0% | |
| !! | TCATGTTCTTGTTGATGGCA+AGG | - | chr4_4:7348673-7348692 | Msa0667110:intron | 40.0% |
| !! | TTCTTGTTGATGGCAAGGTT+AGG | - | chr4_4:7348678-7348697 | Msa0667110:intron | 40.0% |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr4_4:7349427-7349446 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr4_4:7349558-7349577 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr4_4:7349559-7349578 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr4_4:7349560-7349579 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr4_4:7349591-7349610 | None:intergenic | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | + | chr4_4:7349799-7349818 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | chr4_4:7349894-7349913 | Msa0667110:CDS | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | + | chr4_4:7349901-7349920 | None:intergenic | 40.0% | |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | - | chr4_4:7349956-7349975 | Msa0667110:CDS | 40.0% |
| TAACAATAGGACTGCACCAA+GGG | + | chr4_4:7350161-7350180 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr4_4:7350162-7350181 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr4_4:7350161-7350180 | Msa0667110:CDS | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr4_4:7350162-7350181 | Msa0667110:CDS | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | + | chr4_4:7350232-7350251 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | + | chr4_4:7350233-7350252 | None:intergenic | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr4_4:7350234-7350253 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr4_4:7350235-7350254 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr4_4:7350247-7350266 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr4_4:7350291-7350310 | Msa0667110:intron | 40.0% | |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr4_4:7350299-7350318 | None:intergenic | 40.0% |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | + | chr4_4:7350428-7350447 | None:intergenic | 40.0% |
| TCCCAGGCATAAAACCAAAT+TGG | - | chr4_4:7350427-7350446 | Msa0667110:intron | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | + | chr4_4:7350444-7350463 | None:intergenic | 40.0% | |
| TACCCTTTCCCATAACTTCA+TGG | - | chr4_4:7350491-7350510 | Msa0667110:intron | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | + | chr4_4:7350537-7350556 | None:intergenic | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | - | chr4_4:7350561-7350580 | Msa0667110:intron | 40.0% | |
| TATGAGGACGAAGAAAATGC+CGG | + | chr4_4:7350613-7350632 | None:intergenic | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | + | chr4_4:7350724-7350743 | None:intergenic | 40.0% | |
| GCGTTGAAAAGGATGAGTAA+TGG | + | chr4_4:7350729-7350748 | None:intergenic | 40.0% | |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | + | chr4_4:7350740-7350759 | None:intergenic | 40.0% |
| TAACTATTATCGCCGGATTC+AGG | + | chr4_4:7350769-7350788 | None:intergenic | 40.0% | |
| TAACAGGTTAGACATCAGAG+AGG | + | chr4_4:7350805-7350824 | None:intergenic | 40.0% | |
| ATGTCTAACCTGTTAGAGTC+TGG | - | chr4_4:7350810-7350829 | Msa0667110:intron | 40.0% | |
| AGATCTTACCAGACTCTAAC+AGG | + | chr4_4:7350821-7350840 | None:intergenic | 40.0% | |
| TCATAGGGTACAAGTCTTCA+AGG | - | chr4_4:7350949-7350968 | Msa0667110:intron | 40.0% | |
| CATAGGGTACAAGTCTTCAA+GGG | - | chr4_4:7350950-7350969 | Msa0667110:intron | 40.0% | |
| AATGTCAGACAGATGCATAC+AGG | - | chr4_4:7350993-7351012 | Msa0667110:intron | 40.0% | |
| ATCTGTTCAATTCGGACAGA+AGG | - | chr4_4:7351144-7351163 | Msa0667110:intron | 40.0% | |
| TCTGTTCAATTCGGACAGAA+GGG | - | chr4_4:7351145-7351164 | Msa0667110:intron | 40.0% | |
| CCATCATAGGTGTTCAGATA+GGG | + | chr4_4:7351175-7351194 | None:intergenic | 40.0% | |
| ACCATCATAGGTGTTCAGAT+AGG | + | chr4_4:7351176-7351195 | None:intergenic | 40.0% | |
| !! | TTGGCCTTAATTAGTGGATC+TGG | + | chr4_4:7351214-7351233 | None:intergenic | 40.0% |
| !! | GTGTCATTGGCCTTAATTAG+TGG | + | chr4_4:7351220-7351239 | None:intergenic | 40.0% |
| !! | GTTTTCAAGGTCAAGCTTGA+TGG | + | chr4_4:7351242-7351261 | None:intergenic | 40.0% |
| ! | AACTTGATGCCTTTTCCCTT+GGG | + | chr4_4:7351481-7351500 | None:intergenic | 40.0% |
| !! | TTGCATTTTTGTTGACTGGG+AGG | - | chr4_4:7351573-7351592 | Msa0667110:intron | 40.0% |
| CCATGTTAAACATCACGCAA+CGG | + | chr4_4:7351771-7351790 | None:intergenic | 40.0% | |
| TTCAGCACAAGACTCCAACA+TGG | - | chr4_4:7347028-7347047 | Msa0667110:three_prime_UTR | 45.0% | |
| CTTCAATCAGAAGGGTAGGA+GGG | + | chr4_4:7347321-7347340 | None:intergenic | 45.0% | |
| TCTTCAATCAGAAGGGTAGG+AGG | + | chr4_4:7347322-7347341 | None:intergenic | 45.0% | |
| CGGACACATCTTCAATCAGA+AGG | + | chr4_4:7347330-7347349 | None:intergenic | 45.0% | |
| CGCTAACATGTGTTAGACAC+CGG | + | chr4_4:7347350-7347369 | None:intergenic | 45.0% | |
| ! | TGGGATGGAGAGAGTATATG+GGG | - | chr4_4:7347729-7347748 | Msa0667110:intron | 45.0% |
| CGAGCTCATCTTTATGTCCT+AGG | - | chr4_4:7348023-7348042 | Msa0667110:intron | 45.0% | |
| ACTAACATATCCCCATCCCT+AGG | + | chr4_4:7348043-7348062 | None:intergenic | 45.0% | |
| TGGATGCTTGACAAACTTGG+TGG | - | chr4_4:7348425-7348444 | Msa0667110:intron | 45.0% | |
| !! | CTCAATTGGTTTGGATGTGC+AGG | - | chr4_4:7348529-7348548 | Msa0667110:intron | 45.0% |
| TTTCGCAGGATGAGGATCAA+AGG | + | chr4_4:7348599-7348618 | None:intergenic | 45.0% | |
| AACATGACGCTGCATCAAGA+TGG | + | chr4_4:7348660-7348679 | None:intergenic | 45.0% | |
| CAGCGTCATGTTCTTGTTGA+TGG | - | chr4_4:7348668-7348687 | Msa0667110:intron | 45.0% | |
| !! | ACATATCCCGCTGGTTTCAT+GGG | - | chr4_4:7348710-7348729 | Msa0667110:intron | 45.0% |
| !! | CCTTGGTGTCATACAGAAGA+CGG | + | chr4_4:7348879-7348898 | None:intergenic | 45.0% |
| CGTCTTCTGTATGACACCAA+GGG | - | chr4_4:7348877-7348896 | Msa0667110:intron | 45.0% | |
| TTCTGTATGACACCAAGGGT+CGG | - | chr4_4:7348881-7348900 | Msa0667110:intron | 45.0% | |
| ACTCACTCACACACTGCTTA+AGG | - | chr4_4:7349073-7349092 | Msa0667110:intron | 45.0% | |
| CTCACTCACACACTGCTTAA+GGG | - | chr4_4:7349074-7349093 | Msa0667110:intron | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr4_4:7349286-7349305 | Msa0667110:intron | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | + | chr4_4:7349492-7349511 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr4_4:7349557-7349576 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr4_4:7349638-7349657 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr4_4:7349641-7349660 | Msa0667110:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr4_4:7349677-7349696 | None:intergenic | 45.0% |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr4_4:7349678-7349697 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr4_4:7349682-7349701 | Msa0667110:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr4_4:7349686-7349705 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr4_4:7349753-7349772 | Msa0667110:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr4_4:7349772-7349791 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr4_4:7349786-7349805 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr4_4:7349795-7349814 | None:intergenic | 45.0% | |
| GGGTCCGTAGTACAAAATGA+CGG | + | chr4_4:7349838-7349857 | None:intergenic | 45.0% | |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr4_4:7350051-7350070 | None:intergenic | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | chr4_4:7350079-7350098 | Msa0667110:intron | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr4_4:7350289-7350308 | None:intergenic | 45.0% |
| GTCTTGGCGATAGAGGAATT+GGG | + | chr4_4:7350662-7350681 | None:intergenic | 45.0% | |
| AGTCTTGGCGATAGAGGAAT+TGG | + | chr4_4:7350663-7350682 | None:intergenic | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | + | chr4_4:7350669-7350688 | None:intergenic | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | + | chr4_4:7350716-7350735 | None:intergenic | 45.0% | |
| ATGAGTAATGGCAAGGCAGT+TGG | + | chr4_4:7350717-7350736 | None:intergenic | 45.0% | |
| ATACTGACACAGACACGACA+TGG | + | chr4_4:7350922-7350941 | None:intergenic | 45.0% | |
| CCCTATCTGAACACCTATGA+TGG | - | chr4_4:7351172-7351191 | Msa0667110:intron | 45.0% | |
| !! | GTCAAGCTTGATGGTGTCAT+TGG | + | chr4_4:7351233-7351252 | None:intergenic | 45.0% |
| TGATGTGGGGAATGTTGTCA+TGG | - | chr4_4:7351288-7351307 | Msa0667110:intron | 45.0% | |
| GGGAATGTTGTCATGGTTAC+CGG | - | chr4_4:7351295-7351314 | Msa0667110:intron | 45.0% | |
| AATGTTGTCATGGTTACCGG+AGG | - | chr4_4:7351298-7351317 | Msa0667110:intron | 45.0% | |
| ATCCATGTTCAGGATGCAAG+TGG | - | chr4_4:7351385-7351404 | Msa0667110:intron | 45.0% | |
| GTATCTCTTCCCAAGGGAAA+AGG | - | chr4_4:7351469-7351488 | Msa0667110:intron | 45.0% | |
| ! | CAACTTGATGCCTTTTCCCT+TGG | + | chr4_4:7351482-7351501 | None:intergenic | 45.0% |
| CCGTTGCGTGATGTTTAACA+TGG | - | chr4_4:7351768-7351787 | Msa0667110:intron | 45.0% | |
| !! | AGTAAAAAAAAAAAAAAATA+TGG | - | chr4_4:7347655-7347674 | Msa0667110:CDS | 5.0% |
| ! | GCCGTCTTTTTGTGTCGTGT+CGG | - | chr4_4:7347438-7347457 | Msa0667110:CDS | 50.0% |
| CCCGACACGACACAAAAAGA+CGG | + | chr4_4:7347442-7347461 | None:intergenic | 50.0% | |
| ! | CCGTCTTTTTGTGTCGTGTC+GGG | - | chr4_4:7347439-7347458 | Msa0667110:CDS | 50.0% |
| ATCTGGACCCCACAAGTCAA+GGG | - | chr4_4:7348565-7348584 | Msa0667110:intron | 50.0% | |
| !! | AAGGCACTCCCTTGACTTGT+GGG | + | chr4_4:7348576-7348595 | None:intergenic | 50.0% |
| GCAGGATGAGGATCAAAGGA+AGG | + | chr4_4:7348595-7348614 | None:intergenic | 50.0% | |
| TCAGTCTGTTTCGCAGGATG+AGG | + | chr4_4:7348607-7348626 | None:intergenic | 50.0% | |
| ACAGACAAGACATATCCCGC+TGG | - | chr4_4:7348701-7348720 | Msa0667110:intron | 50.0% | |
| !! | GACATATCCCGCTGGTTTCA+TGG | - | chr4_4:7348709-7348728 | Msa0667110:intron | 50.0% |
| CACATACCCATGAAACCAGC+GGG | + | chr4_4:7348719-7348738 | None:intergenic | 50.0% | |
| GCACATACCCATGAAACCAG+CGG | + | chr4_4:7348720-7348739 | None:intergenic | 50.0% | |
| CCGTCTTCTGTATGACACCA+AGG | - | chr4_4:7348876-7348895 | Msa0667110:intron | 50.0% | |
| TGTCAGGGATGATGAGGCAA+AGG | - | chr4_4:7348918-7348937 | Msa0667110:intron | 50.0% | |
| TCACGTGTCTGGACAAGTCT+TGG | + | chr4_4:7349187-7349206 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr4_4:7349285-7349304 | Msa0667110:intron | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr4_4:7349287-7349306 | Msa0667110:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4_4:7349291-7349310 | Msa0667110:intron | 50.0% | |
| GCGGAGAGTCAGGTTAAAAG+AGG | + | chr4_4:7349433-7349452 | None:intergenic | 50.0% | |
| ! | AGATCAAATGGCGGAGAGTC+AGG | + | chr4_4:7349443-7349462 | None:intergenic | 50.0% |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr4_4:7349465-7349484 | Msa0667110:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr4_4:7349610-7349629 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr4_4:7349630-7349649 | None:intergenic | 50.0% |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr4_4:7349691-7349710 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | chr4_4:7349911-7349930 | None:intergenic | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | + | chr4_4:7349962-7349981 | None:intergenic | 50.0% | |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr4_4:7349959-7349978 | Msa0667110:CDS | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | + | chr4_4:7349988-7350007 | None:intergenic | 50.0% |
| TAAACGGGAGGCTAGAGACT+TGG | + | chr4_4:7350011-7350030 | None:intergenic | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr4_4:7350026-7350045 | None:intergenic | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr4_4:7350027-7350046 | None:intergenic | 50.0% | |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr4_4:7350040-7350059 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr4_4:7350041-7350060 | None:intergenic | 50.0% |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr4_4:7350142-7350161 | Msa0667110:CDS | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | - | chr4_4:7350226-7350245 | Msa0667110:CDS | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | chr4_4:7350277-7350296 | None:intergenic | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | chr4_4:7350278-7350297 | None:intergenic | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | chr4_4:7350279-7350298 | None:intergenic | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | + | chr4_4:7350388-7350407 | None:intergenic | 50.0% | |
| TTGGCGATAGAGGAATTGGG+TGG | + | chr4_4:7350659-7350678 | None:intergenic | 50.0% | |
| CAGGTTAGACATCAGAGAGG+AGG | + | chr4_4:7350802-7350821 | None:intergenic | 50.0% | |
| !! | TAGTGGATCTGGATAGCGGA+TGG | + | chr4_4:7351203-7351222 | None:intergenic | 50.0% |
| TTGTCATGGTTACCGGAGGA+AGG | - | chr4_4:7351302-7351321 | Msa0667110:intron | 50.0% | |
| GTTACCGGAGGAAGGAATAG+AGG | - | chr4_4:7351310-7351329 | Msa0667110:intron | 50.0% | |
| ACGACCTCTATTCCTTCCTC+CGG | + | chr4_4:7351317-7351336 | None:intergenic | 50.0% | |
| GGAAGGAATAGAGGTCGTGT+TGG | - | chr4_4:7351319-7351338 | Msa0667110:intron | 50.0% | |
| GACCACTTGCATCCTGAACA+TGG | + | chr4_4:7351390-7351409 | None:intergenic | 50.0% | |
| GTGGTCATGAGTTTGCCACT+CGG | - | chr4_4:7351404-7351423 | Msa0667110:intron | 50.0% | |
| TCATGAGTTTGCCACTCGGT+TGG | - | chr4_4:7351408-7351427 | Msa0667110:intron | 50.0% | |
| CATGAGTTTGCCACTCGGTT+GGG | - | chr4_4:7351409-7351428 | Msa0667110:intron | 50.0% | |
| AAACACATTGCCCAACCGAG+TGG | + | chr4_4:7351422-7351441 | None:intergenic | 50.0% | |
| TTGGCAAGGGAACAAAGCCT+TGG | - | chr4_4:7351446-7351465 | Msa0667110:intron | 50.0% | |
| TGGCAAGGGAACAAAGCCTT+GGG | - | chr4_4:7351447-7351466 | Msa0667110:intron | 50.0% | |
| CCTTGGGTATCTCTTCCCAA+GGG | - | chr4_4:7351463-7351482 | Msa0667110:intron | 50.0% | |
| TGAAGAGGCTAGAAAGAGGC+AGG | - | chr4_4:7351510-7351529 | Msa0667110:intron | 50.0% | |
| TCAGAGATGAGTTCCGCCGT+GGG | + | chr4_4:7347003-7347022 | None:intergenic | 55.0% | |
| ATCAGAGATGAGTTCCGCCG+TGG | + | chr4_4:7347004-7347023 | None:intergenic | 55.0% | |
| CAGGCACCAAAGCCATCATC+TGG | - | chr4_4:7348548-7348567 | Msa0667110:intron | 55.0% | |
| ! | TGGGGTCCAGATGATGGCTT+TGG | + | chr4_4:7348557-7348576 | None:intergenic | 55.0% |
| GACTTGTGGGGTCCAGATGA+TGG | + | chr4_4:7348563-7348582 | None:intergenic | 55.0% | |
| CATCTGGACCCCACAAGTCA+AGG | - | chr4_4:7348564-7348583 | Msa0667110:intron | 55.0% | |
| !! | AGGCACTCCCTTGACTTGTG+GGG | + | chr4_4:7348575-7348594 | None:intergenic | 55.0% |
| !! | GAAGGCACTCCCTTGACTTG+TGG | + | chr4_4:7348577-7348596 | None:intergenic | 55.0% |
| GTTCCGTCTCCACTCTGTCA+GGG | - | chr4_4:7348903-7348922 | Msa0667110:intron | 55.0% | |
| CATCCCTGACAGAGTGGAGA+CGG | + | chr4_4:7348909-7348928 | None:intergenic | 55.0% | |
| CCTCATCATCCCTGACAGAG+TGG | + | chr4_4:7348915-7348934 | None:intergenic | 55.0% | |
| CCACTCTGTCAGGGATGATG+AGG | - | chr4_4:7348912-7348931 | Msa0667110:intron | 55.0% | |
| ACAGACGCATGTCACGTGTC+TGG | + | chr4_4:7349198-7349217 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4_4:7349293-7349312 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr4_4:7349299-7349318 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr4_4:7349300-7349319 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_4:7349299-7349318 | Msa0667110:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr4_4:7349466-7349485 | Msa0667110:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr4_4:7349618-7349637 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr4_4:7349704-7349723 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | - | chr4_4:7349978-7349997 | Msa0667110:intron | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | + | chr4_4:7350202-7350221 | None:intergenic | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | + | chr4_4:7350203-7350222 | None:intergenic | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | + | chr4_4:7350204-7350223 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | + | chr4_4:7350208-7350227 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | - | chr4_4:7350268-7350287 | Msa0667110:intron | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | - | chr4_4:7350269-7350288 | Msa0667110:intron | 55.0% | |
| ! | CGTGATGGAGCGATATCGGA+CGG | + | chr4_4:7350373-7350392 | None:intergenic | 55.0% |
| ! | GACGCGTGATGGAGCGATAT+CGG | + | chr4_4:7350377-7350396 | None:intergenic | 55.0% |
| TATGCCTGGGAGGTCGACTA+TGG | + | chr4_4:7350418-7350437 | None:intergenic | 55.0% | |
| GTGCTTCTTCTCCACTCGTC+CGG | - | chr4_4:7350591-7350610 | Msa0667110:intron | 55.0% | |
| CGAAGAAAATGCCGGACGAG+TGG | + | chr4_4:7350605-7350624 | None:intergenic | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | + | chr4_4:7350712-7350731 | None:intergenic | 55.0% | |
| TCACCTCGTGCTCCTGAATC+CGG | - | chr4_4:7350754-7350773 | Msa0667110:intron | 55.0% | |
| GCCTTGGGTATCTCTTCCCA+AGG | - | chr4_4:7351462-7351481 | Msa0667110:intron | 55.0% | |
| CCCTTGGGAAGAGATACCCA+AGG | + | chr4_4:7351466-7351485 | None:intergenic | 55.0% | |
| AGATGAGTTCCGCCGTGGGT+GGG | + | chr4_4:7346999-7347018 | None:intergenic | 60.0% | |
| GGTTCCGTCTCCACTCTGTC+AGG | - | chr4_4:7348902-7348921 | Msa0667110:intron | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | + | chr4_4:7350008-7350027 | None:intergenic | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | + | chr4_4:7350023-7350042 | None:intergenic | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr4_4:7350037-7350056 | None:intergenic | 60.0% |
| AGGACGCAGGATGGGGATAC+CGG | + | chr4_4:7350195-7350214 | None:intergenic | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | + | chr4_4:7350215-7350234 | None:intergenic | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | + | chr4_4:7350272-7350291 | None:intergenic | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | - | chr4_4:7350411-7350430 | Msa0667110:CDS | 60.0% | |
| GCGGATGGTGCGACCATCAT+AGG | + | chr4_4:7351188-7351207 | None:intergenic | 60.0% | |
| TGAACCCACCCACCCACCCA+CGG | - | chr4_4:7346984-7347003 | Msa0667110:three_prime_UTR | 65.0% | |
| GAGATGAGTTCCGCCGTGGG+TGG | + | chr4_4:7347000-7347019 | None:intergenic | 65.0% | |
| GTGGAGACGGAACCGACCCT+TGG | + | chr4_4:7348896-7348915 | None:intergenic | 65.0% | |
| ! | TCGCCGGATTCAGGAGCACG+AGG | + | chr4_4:7350760-7350779 | None:intergenic | 65.0% |
| GAGTTCCGCCGTGGGTGGGT+GGG | + | chr4_4:7346995-7347014 | None:intergenic | 70.0% | |
| TGAGTTCCGCCGTGGGTGGG+TGG | + | chr4_4:7346996-7347015 | None:intergenic | 70.0% | |
| GAGAAGGCCCGTAGACGCCG+TGG | + | chr4_4:7349476-7349495 | None:intergenic | 70.0% | |
| ACCCACCCACCCACCCACGG+CGG | - | chr4_4:7346987-7347006 | Msa0667110:three_prime_UTR | 75.0% | |
| TCCGCCGTGGGTGGGTGGGT+GGG | + | chr4_4:7346991-7347010 | None:intergenic | 75.0% | |
| TTCCGCCGTGGGTGGGTGGG+TGG | + | chr4_4:7346992-7347011 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 7346978 | 7351843 | 7346978 | ID=Msa0667110;Name=Msa0667110 |
| chr4_4 | mRNA | 7346978 | 7351843 | 7346978 | ID=Msa0667110-mRNA-1;Parent=Msa0667110;Name=Msa0667110-mRNA-1;_AED=0.04;_eAED=0.04;_QI=69|1|1|1|0.75|0.8|5|285|264 |
| chr4_4 | exon | 7346978 | 7347697 | 7346978 | ID=Msa0667110-mRNA-1:exon:2402;Parent=Msa0667110-mRNA-1 |
| chr4_4 | exon | 7349882 | 7349979 | 7349882 | ID=Msa0667110-mRNA-1:exon:2401;Parent=Msa0667110-mRNA-1 |
| chr4_4 | exon | 7350090 | 7350270 | 7350090 | ID=Msa0667110-mRNA-1:exon:2400;Parent=Msa0667110-mRNA-1 |
| chr4_4 | exon | 7350367 | 7350444 | 7350367 | ID=Msa0667110-mRNA-1:exon:2399;Parent=Msa0667110-mRNA-1 |
| chr4_4 | exon | 7351772 | 7351843 | 7351772 | ID=Msa0667110-mRNA-1:exon:2398;Parent=Msa0667110-mRNA-1 |
| chr4_4 | five_prime_UTR | 7351775 | 7351843 | 7351775 | ID=Msa0667110-mRNA-1:five_prime_utr;Parent=Msa0667110-mRNA-1 |
| chr4_4 | CDS | 7351772 | 7351774 | 7351772 | ID=Msa0667110-mRNA-1:cds;Parent=Msa0667110-mRNA-1 |
| chr4_4 | CDS | 7350367 | 7350444 | 7350367 | ID=Msa0667110-mRNA-1:cds;Parent=Msa0667110-mRNA-1 |
| chr4_4 | CDS | 7350090 | 7350270 | 7350090 | ID=Msa0667110-mRNA-1:cds;Parent=Msa0667110-mRNA-1 |
| chr4_4 | CDS | 7349882 | 7349979 | 7349882 | ID=Msa0667110-mRNA-1:cds;Parent=Msa0667110-mRNA-1 |
| chr4_4 | CDS | 7347263 | 7347697 | 7347263 | ID=Msa0667110-mRNA-1:cds;Parent=Msa0667110-mRNA-1 |
| chr4_4 | three_prime_UTR | 7346978 | 7347262 | 7346978 | ID=Msa0667110-mRNA-1:three_prime_utr;Parent=Msa0667110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
