Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301250 | XP_013461067.1 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 7.37e-146 | 414 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301250 | sp|O82528|RL15_PETHY | 88.235 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 7.90e-131 | 369 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301250 | I3T9M3 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 3.52e-146 | 414 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001760 | Msa0301250 | 0.895469 | 9.306950e-76 | -8.615850e-47 |
Msa0003330 | Msa0301250 | 0.903752 | 2.505473e-79 | -8.615850e-47 |
Msa0016350 | Msa0301250 | 0.806496 | 7.997252e-50 | -8.615850e-47 |
Msa0021290 | Msa0301250 | 0.810288 | 1.241849e-50 | -8.615850e-47 |
Msa0021320 | Msa0301250 | 0.802078 | 6.655096e-49 | -8.615850e-47 |
Msa0027590 | Msa0301250 | 0.878442 | 2.798643e-69 | -8.615850e-47 |
Msa0040220 | Msa0301250 | 0.850341 | 1.807604e-60 | -8.615850e-47 |
Msa0042510 | Msa0301250 | 0.882665 | 8.608487e-71 | -8.615850e-47 |
Msa0071640 | Msa0301250 | 0.804874 | 1.752172e-49 | -8.615850e-47 |
Msa0072570 | Msa0301250 | 0.807991 | 3.857017e-50 | -8.615850e-47 |
Msa0075350 | Msa0301250 | 0.828895 | 6.970082e-55 | -8.615850e-47 |
Msa0079560 | Msa0301250 | 0.881098 | 3.181272e-70 | -8.615850e-47 |
Msa0086160 | Msa0301250 | 0.866703 | 2.348828e-65 | -8.615850e-47 |
Msa0087910 | Msa0301250 | 0.833633 | 4.766818e-56 | -8.615850e-47 |
Msa0089540 | Msa0301250 | 0.824221 | 9.075840e-54 | -8.615850e-47 |
Msa0094210 | Msa0301250 | 0.825292 | 5.075898e-54 | -8.615850e-47 |
Msa0114600 | Msa0301250 | 0.818277 | 2.132121e-52 | -8.615850e-47 |
Msa0116600 | Msa0301250 | 0.858312 | 8.979717e-63 | -8.615850e-47 |
Msa0116690 | Msa0301250 | 0.852212 | 5.354099e-61 | -8.615850e-47 |
Msa0123290 | Msa0301250 | 0.832982 | 6.926205e-56 | -8.615850e-47 |
Msa0127230 | Msa0301250 | 0.870076 | 1.917842e-66 | -8.615850e-47 |
Msa0128330 | Msa0301250 | 0.876950 | 9.287519e-69 | -8.615850e-47 |
Msa0132460 | Msa0301250 | 0.892206 | 1.966077e-74 | -8.615850e-47 |
Msa0134580 | Msa0301250 | 0.862797 | 3.928055e-64 | -8.615850e-47 |
Msa0146610 | Msa0301250 | 0.801404 | 9.150420e-49 | -8.615850e-47 |
Msa0167860 | Msa0301250 | 0.901879 | 1.712736e-78 | -8.615850e-47 |
Msa0168320 | Msa0301250 | 0.869962 | 2.088677e-66 | -8.615850e-47 |
Msa0174580 | Msa0301250 | 0.872248 | 3.678868e-67 | -8.615850e-47 |
Msa0175000 | Msa0301250 | 0.810420 | 1.162872e-50 | -8.615850e-47 |
Msa0182050 | Msa0301250 | 0.897169 | 1.824116e-76 | -8.615850e-47 |
Msa0182100 | Msa0301250 | 0.897995 | 8.178008e-77 | -8.615850e-47 |
Msa0183840 | Msa0301250 | 0.820638 | 6.170188e-53 | -8.615850e-47 |
Msa0188740 | Msa0301250 | 0.869897 | 2.194153e-66 | -8.615850e-47 |
Msa0191450 | Msa0301250 | 0.849288 | 3.559386e-60 | -8.615850e-47 |
Msa0191550 | Msa0301250 | 0.857572 | 1.489974e-62 | -8.615850e-47 |
Msa0192300 | Msa0301250 | 0.994832 | 1.341607e-210 | -8.615850e-47 |
Msa0194940 | Msa0301250 | 0.834519 | 2.860572e-56 | -8.615850e-47 |
Msa0195030 | Msa0301250 | 0.864324 | 1.320052e-64 | -8.615850e-47 |
Msa0216200 | Msa0301250 | 0.828132 | 1.065501e-54 | -8.615850e-47 |
Msa0219090 | Msa0301250 | 0.805856 | 1.090705e-49 | -8.615850e-47 |
Msa0233550 | Msa0301250 | 0.858544 | 7.659292e-63 | -8.615850e-47 |
Msa0234850 | Msa0301250 | 0.813857 | 2.069594e-51 | -8.615850e-47 |
Msa0234900 | Msa0301250 | 0.805032 | 1.623306e-49 | -8.615850e-47 |
Msa0237180 | Msa0301250 | 0.863598 | 2.220125e-64 | -8.615850e-47 |
Msa0239420 | Msa0301250 | 0.859718 | 3.407335e-63 | -8.615850e-47 |
Msa0270160 | Msa0301250 | 0.877108 | 8.181449e-69 | -8.615850e-47 |
Msa0274940 | Msa0301250 | 0.857952 | 1.149170e-62 | -8.615850e-47 |
Msa0277600 | Msa0301250 | 0.869124 | 3.917655e-66 | -8.615850e-47 |
Msa0281330 | Msa0301250 | 0.808393 | 3.167044e-50 | -8.615850e-47 |
Msa0281370 | Msa0301250 | 0.854572 | 1.125929e-61 | -8.615850e-47 |
Msa0301250 | Msa0313060 | 0.978898 | 8.479199e-147 | -8.615850e-47 |
Msa0301250 | Msa0315430 | 0.897461 | 1.374599e-76 | -8.615850e-47 |
Msa0301250 | Msa0315660 | 0.862805 | 3.907034e-64 | -8.615850e-47 |
Msa0301250 | Msa0340560 | 0.835352 | 1.764012e-56 | -8.615850e-47 |
Msa0301250 | Msa0371490 | 0.887202 | 1.755502e-72 | -8.615850e-47 |
Msa0301250 | Msa0373350 | 0.802541 | 5.342243e-49 | -8.615850e-47 |
Msa0301250 | Msa0376850 | 0.859087 | 5.271179e-63 | -8.615850e-47 |
Msa0301250 | Msa0377370 | 0.886306 | 3.835092e-72 | -8.615850e-47 |
Msa0301250 | Msa0377520 | 0.861142 | 1.262449e-63 | -8.615850e-47 |
Msa0301250 | Msa0382670 | 0.854588 | 1.113707e-61 | -8.615850e-47 |
Msa0301250 | Msa0387290 | 0.848093 | 7.633259e-60 | -8.615850e-47 |
Msa0301250 | Msa0388520 | 0.855345 | 6.714383e-62 | -8.615850e-47 |
Msa0301250 | Msa0416470 | 0.845754 | 3.333387e-59 | -8.615850e-47 |
Msa0301250 | Msa0419710 | 0.814081 | 1.846927e-51 | -8.615850e-47 |
Msa0301250 | Msa0426090 | 0.872413 | 3.241311e-67 | -8.615850e-47 |
Msa0301250 | Msa0426250 | 0.858086 | 1.048857e-62 | -8.615850e-47 |
Msa0301250 | Msa0426940 | 0.857161 | 1.970471e-62 | -8.615850e-47 |
Msa0301250 | Msa0432260 | -0.812331 | 4.474269e-51 | -8.615850e-47 |
Msa0301250 | Msa0432750 | 0.810563 | 1.083416e-50 | -8.615850e-47 |
Msa0301250 | Msa0433060 | 0.809583 | 1.761525e-50 | -8.615850e-47 |
Msa0301250 | Msa0436830 | -0.828490 | 8.735508e-55 | -8.615850e-47 |
Msa0301250 | Msa0450150 | 0.857940 | 1.159110e-62 | -8.615850e-47 |
Msa0301250 | Msa0469430 | 0.838248 | 3.219123e-57 | -8.615850e-47 |
Msa0301250 | Msa0472480 | 0.875663 | 2.580937e-68 | -8.615850e-47 |
Msa0301250 | Msa0475810 | 0.822983 | 1.768574e-53 | -8.615850e-47 |
Msa0301250 | Msa0479980 | 0.809064 | 2.276047e-50 | -8.615850e-47 |
Msa0301250 | Msa0481520 | 0.861534 | 9.589624e-64 | -8.615850e-47 |
Msa0301250 | Msa0482560 | 0.879773 | 9.472138e-70 | -8.615850e-47 |
Msa0301250 | Msa0485220 | 0.835806 | 1.354228e-56 | -8.615850e-47 |
Msa0301250 | Msa0511760 | 0.896704 | 2.855814e-76 | -8.615850e-47 |
Msa0301250 | Msa0515110 | 0.821622 | 3.661405e-53 | -8.615850e-47 |
Msa0301250 | Msa0516830 | 0.859321 | 4.483992e-63 | -8.615850e-47 |
Msa0301250 | Msa0517480 | 0.836062 | 1.166406e-56 | -8.615850e-47 |
Msa0301250 | Msa0521730 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
Msa0301250 | Msa0524680 | 0.806557 | 7.762002e-50 | -8.615850e-47 |
Msa0301250 | Msa0529900 | 0.830487 | 2.856513e-55 | -8.615850e-47 |
Msa0301250 | Msa0547920 | 0.879773 | 9.472138e-70 | -8.615850e-47 |
Msa0301250 | Msa0563540 | 0.832651 | 8.371031e-56 | -8.615850e-47 |
Msa0301250 | Msa0573550 | 0.937331 | 4.123863e-98 | -8.615850e-47 |
Msa0301250 | Msa0574780 | 0.884237 | 2.276283e-71 | -8.615850e-47 |
Msa0301250 | Msa0578010 | 0.884918 | 1.271125e-71 | -8.615850e-47 |
Msa0301250 | Msa0579830 | 0.812799 | 3.534083e-51 | -8.615850e-47 |
Msa0301250 | Msa0582070 | 0.819929 | 8.970667e-53 | -8.615850e-47 |
Msa0301250 | Msa0585570 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
Msa0301250 | Msa0589160 | 0.843949 | 1.023037e-58 | -8.615850e-47 |
Msa0301250 | Msa0597240 | 0.880808 | 4.046986e-70 | -8.615850e-47 |
Msa0301250 | Msa0602900 | 0.880596 | 4.819287e-70 | -8.615850e-47 |
Msa0301250 | Msa0605600 | 0.818596 | 1.805295e-52 | -8.615850e-47 |
Msa0301250 | Msa0605890 | 0.845301 | 4.423434e-59 | -8.615850e-47 |
Msa0301250 | Msa0609120 | 0.839942 | 1.171642e-57 | -8.615850e-47 |
Msa0301250 | Msa0619230 | 0.900720 | 5.525163e-78 | -8.615850e-47 |
Msa0301250 | Msa0621190 | 0.894197 | 3.092986e-75 | -8.615850e-47 |
Msa0301250 | Msa0622230 | 0.819502 | 1.122903e-52 | -8.615850e-47 |
Msa0301250 | Msa0629280 | 0.825555 | 4.396997e-54 | -8.615850e-47 |
Msa0301250 | Msa0643960 | 0.877335 | 6.823812e-69 | -8.615850e-47 |
Msa0301250 | Msa0649890 | 0.828219 | 1.015344e-54 | -8.615850e-47 |
Msa0301250 | Msa0653060 | 0.815541 | 8.768380e-52 | -8.615850e-47 |
Msa0301250 | Msa0656450 | 0.892005 | 2.363233e-74 | -8.615850e-47 |
Msa0301250 | Msa0663400 | 0.821376 | 4.172231e-53 | -8.615850e-47 |
Msa0301250 | Msa0667110 | 0.838459 | 2.840097e-57 | -8.615850e-47 |
Msa0301250 | Msa0686550 | 0.826228 | 3.044349e-54 | -8.615850e-47 |
Msa0301250 | Msa0691760 | 0.844913 | 5.630822e-59 | -8.615850e-47 |
Msa0301250 | Msa0694400 | 0.918172 | 2.162715e-86 | -8.615850e-47 |
Msa0301250 | Msa0700370 | 0.857339 | 1.746277e-62 | -8.615850e-47 |
Msa0301250 | Msa0704860 | 0.838504 | 2.765755e-57 | -8.615850e-47 |
Msa0301250 | Msa0708630 | 0.894077 | 3.460142e-75 | -8.615850e-47 |
Msa0301250 | Msa0718560 | 0.835985 | 1.219961e-56 | -8.615850e-47 |
Msa0301250 | Msa0748350 | 0.844298 | 8.242339e-59 | -8.615850e-47 |
Msa0301250 | Msa0758420 | 0.864147 | 1.498269e-64 | -8.615850e-47 |
Msa0301250 | Msa0767280 | 0.807836 | 4.161044e-50 | -8.615850e-47 |
Msa0301250 | Msa0788380 | 0.849604 | 2.905760e-60 | -8.615850e-47 |
Msa0301250 | Msa0790450 | 0.874027 | 9.308766e-68 | -8.615850e-47 |
Msa0301250 | Msa0834220 | 0.863418 | 2.524821e-64 | -8.615850e-47 |
Msa0301250 | Msa0838070 | 0.838612 | 2.593287e-57 | -8.615850e-47 |
Msa0301250 | Msa0880050 | 0.847306 | 1.257096e-59 | -8.615850e-47 |
Msa0301250 | Msa0902730 | 0.802678 | 5.005054e-49 | -8.615850e-47 |
Msa0301250 | Msa0929680 | 0.831735 | 1.410472e-55 | -8.615850e-47 |
Msa0301250 | Msa0929700 | 0.930415 | 1.693480e-93 | -8.615850e-47 |
Msa0301250 | Msa0930100 | 0.891786 | 2.889154e-74 | -8.615850e-47 |
Msa0301250 | Msa0930360 | 0.912171 | 2.644583e-83 | -8.615850e-47 |
Msa0301250 | Msa0930790 | 0.913079 | 9.325207e-84 | -8.615850e-47 |
Msa0301250 | Msa0930890 | 0.864246 | 1.396231e-64 | -8.615850e-47 |
Msa0301250 | Msa1001620 | 0.841114 | 5.780344e-58 | -8.615850e-47 |
Msa0301250 | Msa1025200 | 0.835742 | 1.405748e-56 | -8.615850e-47 |
Msa0301250 | Msa1025220 | 0.846627 | 1.928390e-59 | -8.615850e-47 |
Msa0301250 | Msa1026710 | 0.800448 | 1.434554e-48 | -8.615850e-47 |
Msa0301250 | Msa1040160 | 0.805919 | 1.057963e-49 | -8.615850e-47 |
Msa0301250 | Msa1041680 | 0.824287 | 8.759850e-54 | -8.615850e-47 |
Msa0301250 | Msa1041830 | 0.820087 | 8.256608e-53 | -8.615850e-47 |
Msa0301250 | Msa1047020 | 0.812744 | 3.634201e-51 | -8.615850e-47 |
Msa0301250 | Msa1054280 | 0.802035 | 6.791388e-49 | -8.615850e-47 |
Msa0301250 | Msa1068660 | 0.839976 | 1.147972e-57 | -8.615850e-47 |
Msa0301250 | Msa1082050 | 0.898707 | 4.075401e-77 | -8.615850e-47 |
Msa0301250 | Msa1082170 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
Msa0301250 | Msa1083370 | 0.816697 | 4.837475e-52 | -8.615850e-47 |
Msa0301250 | Msa1085850 | 0.848637 | 5.398039e-60 | -8.615850e-47 |
Msa0301250 | Msa1116940 | 0.850481 | 1.651148e-60 | -8.615850e-47 |
Msa0301250 | Msa1124980 | 0.849023 | 4.219799e-60 | -8.615850e-47 |
Msa0301250 | Msa1126690 | 0.890929 | 6.316950e-74 | -8.615850e-47 |
Msa0301250 | Msa1131030 | 0.819109 | 1.379957e-52 | -8.615850e-47 |
Msa0301250 | Msa1136880 | 0.830359 | 3.070771e-55 | -8.615850e-47 |
Msa0301250 | Msa1136980 | 0.818983 | 1.474052e-52 | -8.615850e-47 |
Msa0301250 | Msa1144630 | 0.830162 | 3.429550e-55 | -8.615850e-47 |
Msa0301250 | Msa1156830 | 0.850694 | 1.438922e-60 | -8.615850e-47 |
Msa0301250 | Msa1164150 | 0.802702 | 4.948469e-49 | -8.615850e-47 |
Msa0301250 | Msa1165210 | 0.800351 | 1.501303e-48 | -8.615850e-47 |
Msa0301250 | Msa1165640 | 0.818958 | 1.493618e-52 | -8.615850e-47 |
Msa0301250 | Msa1166570 | 0.822197 | 2.693865e-53 | -8.615850e-47 |
Msa0301250 | Msa1167360 | 0.851298 | 9.718817e-61 | -8.615850e-47 |
Msa0301250 | Msa1180000 | 0.835519 | 1.600982e-56 | -8.615850e-47 |
Msa0301250 | Msa1186030 | 0.801056 | 1.077888e-48 | -8.615850e-47 |
Msa0301250 | Msa1206240 | 0.833903 | 4.081843e-56 | -8.615850e-47 |
Msa0301250 | Msa1213850 | 0.828595 | 8.236348e-55 | -8.615850e-47 |
Msa0301250 | Msa1218610 | 0.830085 | 3.580846e-55 | -8.615850e-47 |
Msa0301250 | Msa1219760 | 0.803108 | 4.080215e-49 | -8.615850e-47 |
Msa0301250 | Msa1227350 | 0.825050 | 5.789886e-54 | -8.615850e-47 |
Msa0301250 | Msa1235950 | 0.901654 | 2.153005e-78 | -8.615850e-47 |
Msa0301250 | Msa1235980 | 0.907322 | 5.746066e-81 | -8.615850e-47 |
Msa0301250 | Msa1237040 | 0.917534 | 4.721646e-86 | -8.615850e-47 |
Msa0301250 | Msa1255830 | 0.813268 | 2.790084e-51 | -8.615850e-47 |
Msa0301250 | Msa1255850 | 0.823192 | 1.580762e-53 | -8.615850e-47 |
Msa0301250 | Msa1258540 | 0.878330 | 3.064160e-69 | -8.615850e-47 |
Msa0301250 | Msa1270640 | 0.812661 | 3.789655e-51 | -8.615850e-47 |
Msa0301250 | Msa1270710 | 0.815624 | 8.402516e-52 | -8.615850e-47 |
Msa0301250 | Msa1278130 | 0.843072 | 1.754673e-58 | -8.615850e-47 |
Msa0301250 | Msa1284060 | 0.852487 | 4.469187e-61 | -8.615850e-47 |
Msa0301250 | Msa1284800 | 0.845630 | 3.603425e-59 | -8.615850e-47 |
Msa0301250 | Msa1296090 | 0.847216 | 1.330776e-59 | -8.615850e-47 |
Msa0301250 | Msa1316100 | 0.857293 | 1.800998e-62 | -8.615850e-47 |
Msa0301250 | Msa1317390 | 0.927079 | 1.936492e-91 | -8.615850e-47 |
Msa0301250 | Msa1333350 | 0.812245 | 4.671083e-51 | -8.615850e-47 |
Msa0301250 | Msa1333370 | 0.818100 | 2.337257e-52 | -8.615850e-47 |
Msa0301250 | Msa1341780 | 0.844643 | 6.656205e-59 | -8.615850e-47 |
Msa0301250 | Msa1347610 | 0.822532 | 2.252071e-53 | -8.615850e-47 |
Msa0301250 | Msa1351020 | 0.904086 | 1.771417e-79 | -8.615850e-47 |
Msa0301250 | Msa1358710 | 0.819056 | 1.418731e-52 | -8.615850e-47 |
Msa0301250 | Msa1363910 | 0.829252 | 5.712814e-55 | -8.615850e-47 |
Msa0301250 | Msa1363930 | 0.830252 | 3.261395e-55 | -8.615850e-47 |
Msa0301250 | Msa1371410 | 0.821310 | 4.322845e-53 | -8.615850e-47 |
Msa0301250 | Msa1385480 | 0.906497 | 1.393601e-80 | -8.615850e-47 |
Msa0301250 | Msa1387750 | 0.884518 | 1.791089e-71 | -8.615850e-47 |
Msa0301250 | Msa1390760 | 0.901332 | 2.983469e-78 | -8.615850e-47 |
Msa0301250 | Msa1403520 | 0.851016 | 1.167451e-60 | -8.615850e-47 |
Msa0301250 | Msa1407550 | 0.897288 | 1.626713e-76 | -8.615850e-47 |
Msa0301250 | Msa1413570 | 0.894043 | 3.572143e-75 | -8.615850e-47 |
Msa0301250 | Msa1415620 | 0.815440 | 9.233007e-52 | -8.615850e-47 |
Msa0301250 | Msa1423050 | 0.846904 | 1.619870e-59 | -8.615850e-47 |
Msa0301250 | Msa1424570 | 0.856636 | 2.813809e-62 | -8.615850e-47 |
Msa0301250 | Msa1425070 | 0.822157 | 2.752475e-53 | -8.615850e-47 |
Msa0301250 | Msa1432310 | 0.886538 | 3.134895e-72 | -8.615850e-47 |
Msa0301250 | Msa1446410 | 0.838808 | 2.307141e-57 | -8.615850e-47 |
Msa0301250 | Msa1446510 | 0.850244 | 1.924428e-60 | -8.615850e-47 |
Msa0301250 | Msa1449160 | 0.818082 | 2.360360e-52 | -8.615850e-47 |
Msa0301250 | Msa1450560 | 0.876664 | 1.166595e-68 | -8.615850e-47 |
Msa0301250 | Msa1453380 | 0.809803 | 1.579477e-50 | -8.615850e-47 |
Msa0301250 | Msa1453530 | 0.834301 | 3.244522e-56 | -8.615850e-47 |
Msa0301250 | Msa1463510 | 0.819322 | 1.234243e-52 | -8.615850e-47 |
Msa0301250 | Msa1463570 | 0.875595 | 2.723287e-68 | -8.615850e-47 |
Msa0301250 | Msa1465700 | 0.912327 | 2.212337e-83 | -8.615850e-47 |
Msa0301250 | Msa1465890 | 0.842126 | 3.128197e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301250 | MtrunA17_Chr3g0118291 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 6.78e-150 | 414 |
Msa0301250 | MtrunA17_Chr2g0282541 | 99.510 | 204 | 1 | 0 | 1 | 204 | 49 | 252 | 1.89e-149 | 415 |
Msa0301250 | MtrunA17_Chr7g0224171 | 90.323 | 62 | 6 | 0 | 1 | 62 | 1 | 62 | 1.93e-35 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301250 | AT4G16720.1 | 88.235 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 9.00e-122 | 343 |
Msa0301250 | AT4G17390.1 | 87.745 | 204 | 25 | 0 | 1 | 204 | 1 | 204 | 1.88e-121 | 342 |
Find 95 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATAGTTTGAGAATTCTTT+AGG | 0.240913 | 2_3:+57111890 | Msa0301250:three_prime_UTR |
CGTGAGACAAACCGAGAAAA+TGG | 0.255682 | 2_3:+57110399 | Msa0301250:exon |
GGAGGAAGCTTGGTGGCCTT+AGG | 0.282780 | 2_3:+57111068 | Msa0301250:CDS |
GTTTCCAAGGGTATTGTATA+CGG | 0.297546 | 2_3:+57110971 | Msa0301250:CDS |
TTGGTAAGCCAGTTGATTCT+TGG | 0.325346 | 2_3:-57111184 | None:intergenic |
TCCTGACAAAGCTCGCCGTT+TGG | 0.353079 | 2_3:+57110643 | Msa0301250:CDS |
GATAGTTTGAGAATTCTTTA+GGG | 0.355332 | 2_3:+57111891 | Msa0301250:three_prime_UTR |
ACAAGTATGTTTCTGAGTTA+TGG | 0.369598 | 2_3:+57110522 | Msa0301250:CDS |
TTAGGGTTCTCAATTCCTAC+TGG | 0.369741 | 2_3:+57111086 | Msa0301250:CDS |
CCTGACAAAGCTCGCCGTTT+GGG | 0.382164 | 2_3:+57110644 | Msa0301250:CDS |
GTCCATCTCGCAGGGCAAAC+TGG | 0.382984 | 2_3:+57111302 | Msa0301250:CDS |
AGGTTCTTATCTCTGGTGTC+TGG | 0.388442 | 2_3:+57111797 | Msa0301250:three_prime_UTR |
ATAATTTAATTATCAAGTTA+TGG | 0.389735 | 2_3:+57111430 | Msa0301250:three_prime_UTR |
TGCGAGATGGACGGGCTTTG+TGG | 0.391277 | 2_3:-57111291 | None:intergenic |
GAGGAAGCTTGGTGGCCTTA+GGG | 0.392690 | 2_3:+57111069 | Msa0301250:CDS |
AATGATGAGGTTCTTATCTC+TGG | 0.417708 | 2_3:+57111790 | Msa0301250:three_prime_UTR |
AATGACCTCAAAATACTTGA+AGG | 0.426532 | 2_3:-57111125 | None:intergenic |
AGCTCGCCGTTTGGGTTACA+AGG | 0.427870 | 2_3:+57110652 | Msa0301250:CDS |
TCTGTTGCCGAGGAGCGTGC+TGG | 0.428375 | 2_3:+57111046 | Msa0301250:CDS |
CCCAAACGGCGAGCTTTGTC+AGG | 0.428600 | 2_3:-57110644 | None:intergenic |
GTTTGCCCTGCGAGATGGAC+GGG | 0.443094 | 2_3:-57111299 | None:intergenic |
TCGGTTTGTCTCACGCTGGC+AGG | 0.454772 | 2_3:-57110391 | None:intergenic |
AGTGCATTAGATCTAGACTT+TGG | 0.460728 | 2_3:+57111407 | Msa0301250:three_prime_UTR |
TTTGTCAGGACGAGTGGGTC+TGG | 0.461552 | 2_3:-57110630 | None:intergenic |
CAGTAACACCTGCTCTCATT+TGG | 0.466095 | 2_3:+57111672 | Msa0301250:three_prime_UTR |
TATACAATACCCTTGGAAAC+CGG | 0.467374 | 2_3:-57110968 | None:intergenic |
CTGTTGCCGAGGAGCGTGCT+GGG | 0.471029 | 2_3:+57111047 | Msa0301250:CDS |
GAGCGTGCTGGGAGGAAGCT+TGG | 0.477629 | 2_3:+57111058 | Msa0301250:CDS |
CCAATCCTGTCCACAAGCAT+AGG | 0.488032 | 2_3:+57111203 | Msa0301250:CDS |
TTCCAGTTTGCCCTGCGAGA+TGG | 0.489110 | 2_3:-57111304 | None:intergenic |
TTACTCAACTTAAGTTTCAA+AGG | 0.490055 | 2_3:+57111014 | Msa0301250:CDS |
TACGTAGAGGTGGGAGAAAG+AGG | 0.490900 | 2_3:+57110945 | Msa0301250:CDS |
ACAAAGCCCGTCCATCTCGC+AGG | 0.495488 | 2_3:+57111293 | Msa0301250:CDS |
CTTCGTGGTCTCACTTCTGC+TGG | 0.495517 | 2_3:+57111229 | Msa0301250:CDS |
TTGAGTAACTCCCTGGTTAG+TGG | 0.499501 | 2_3:-57110999 | None:intergenic |
TCATGCAGCGTGTGAGGTGT+TGG | 0.501162 | 2_3:+57110573 | Msa0301250:CDS |
CATGCAGCGTGTGAGGTGTT+GGG | 0.510206 | 2_3:+57110574 | Msa0301250:CDS |
AGTTTGCCCTGCGAGATGGA+CGG | 0.510514 | 2_3:-57111300 | None:intergenic |
GAGAAAGAGGCCGGTTTCCA+AGG | 0.516642 | 2_3:+57110958 | Msa0301250:CDS |
TGAGTAACTCCCTGGTTAGT+GGG | 0.518159 | 2_3:-57110998 | None:intergenic |
GTGAGACAAACCGAGAAAAT+GGG | 0.520353 | 2_3:+57110400 | Msa0301250:exon |
CCTATGCTTGTGGACAGGAT+TGG | 0.520921 | 2_3:-57111203 | None:intergenic |
CAATAATTCCAAACTATGCT+AGG | 0.528127 | 2_3:-57111972 | None:intergenic |
CACGAAGTTCCCTATGCTTG+TGG | 0.529755 | 2_3:-57111213 | None:intergenic |
GAAATGATCCAAGAATCAAC+TGG | 0.530060 | 2_3:+57111176 | Msa0301250:CDS |
AACAGAGGTTTGAGTGGCAA+AGG | 0.530737 | 2_3:+57111259 | Msa0301250:CDS |
TTTCCAAGGGTATTGTATAC+GGG | 0.532253 | 2_3:+57110972 | Msa0301250:CDS |
TTTGGGTTACAAGGCCAAGC+AGG | 0.540516 | 2_3:+57110661 | Msa0301250:CDS |
AGTTCCCTATGCTTGTGGAC+AGG | 0.542094 | 2_3:-57111208 | None:intergenic |
CGTGCTGGGAGGAAGCTTGG+TGG | 0.543008 | 2_3:+57111061 | Msa0301250:CDS |
ATACGGGAAGCCCACTAACC+AGG | 0.546286 | 2_3:+57110988 | Msa0301250:CDS |
GCGAGCTTTGTCAGGACGAG+TGG | 0.547527 | 2_3:-57110636 | None:intergenic |
GATTACTATAATGAAGCCAA+TGG | 0.547885 | 2_3:+57111931 | Msa0301250:three_prime_UTR |
TAGGGTTCTCAATTCCTACT+GGG | 0.548434 | 2_3:+57111087 | Msa0301250:CDS |
CTTCCTCCCAGCACGCTCCT+CGG | 0.550992 | 2_3:-57111053 | None:intergenic |
CACCTCTACGTACCCTCACT+CGG | 0.553002 | 2_3:-57110934 | None:intergenic |
TTGTTATTAGTAGAGGTGGA+TGG | 0.554620 | 2_3:+57111869 | Msa0301250:three_prime_UTR |
AAGAATAGATGATACCTGCT+TGG | 0.559188 | 2_3:-57110675 | None:intergenic |
CAATCCTGTCCACAAGCATA+GGG | 0.561253 | 2_3:+57111204 | Msa0301250:CDS |
ACTTAAGTTGAGTAACTCCC+TGG | 0.562594 | 2_3:-57111006 | None:intergenic |
CTTCCCGTATACAATACCCT+TGG | 0.574843 | 2_3:-57110975 | None:intergenic |
TTCTAGGCAAAGACACAGAT+CGG | 0.576700 | 2_3:-57111458 | None:intergenic |
CAATTCCTACTGGGTCAATG+AGG | 0.583661 | 2_3:+57111096 | Msa0301250:CDS |
AGAAAGAGGCCGGTTTCCAA+GGG | 0.585417 | 2_3:+57110959 | Msa0301250:CDS |
TTTGACAGCCAAATGAGAGC+AGG | 0.586910 | 2_3:-57111680 | None:intergenic |
CGAGTGAGGGTACGTAGAGG+TGG | 0.590318 | 2_3:+57110935 | Msa0301250:CDS |
ACAGAGGTTTGAGTGGCAAA+GGG | 0.593708 | 2_3:+57111260 | Msa0301250:CDS |
GCTTGGCCTTGTAACCCAAA+CGG | 0.594502 | 2_3:-57110658 | None:intergenic |
TAGAGGTGGGAGAAAGAGGC+CGG | 0.597426 | 2_3:+57110949 | Msa0301250:CDS |
CAAAGCCCGTCCATCTCGCA+GGG | 0.599732 | 2_3:+57111294 | Msa0301250:CDS |
CACAAGCATAGGGAACTTCG+TGG | 0.602517 | 2_3:+57111214 | Msa0301250:CDS |
GAGTAAGAGATCTGTTGCCG+AGG | 0.608981 | 2_3:+57111036 | Msa0301250:CDS |
TACGGGAAGCCCACTAACCA+GGG | 0.619308 | 2_3:+57110989 | Msa0301250:CDS |
GTTATGTTGTGTACCGAGTG+AGG | 0.619671 | 2_3:+57110921 | Msa0301250:CDS |
AGAATCCTCATTGACCCAGT+AGG | 0.619890 | 2_3:-57111101 | None:intergenic |
AAAACGGTAAACTATGCTCA+AGG | 0.622386 | 2_3:+57111757 | Msa0301250:three_prime_UTR |
CGAGCTTTGTCAGGACGAGT+GGG | 0.623786 | 2_3:-57110635 | None:intergenic |
TACTATAATGAAGCCAATGG+TGG | 0.624740 | 2_3:+57111934 | Msa0301250:three_prime_UTR |
GGGTCTGGTGAGACGAACAA+TGG | 0.629081 | 2_3:-57110615 | None:intergenic |
AGGCACATTGATGAATGATG+AGG | 0.635465 | 2_3:+57111777 | Msa0301250:three_prime_UTR |
TGAGATTCATGCAGCGTGTG+AGG | 0.638236 | 2_3:+57110567 | Msa0301250:CDS |
AAAGAAAACAGAGGTTTGAG+TGG | 0.638472 | 2_3:+57111253 | Msa0301250:CDS |
AGTATGTTTCTGAGTTATGG+CGG | 0.642445 | 2_3:+57110525 | Msa0301250:CDS |
AGTAGGAATTGAGAACCCTA+AGG | 0.644888 | 2_3:-57111084 | None:intergenic |
AAAGAACAGATGATCAAACA+AGG | 0.644897 | 2_3:-57111524 | None:intergenic |
TTATGTTGTGTACCGAGTGA+GGG | 0.645103 | 2_3:+57110922 | Msa0301250:CDS |
TTTCTCGGTTTGTCTCACGC+TGG | 0.649311 | 2_3:-57110395 | None:intergenic |
TTGCCGAGGAGCGTGCTGGG+AGG | 0.662735 | 2_3:+57111050 | Msa0301250:CDS |
GTTATGGCGGAAGAAGCAAT+CGG | 0.676275 | 2_3:+57110538 | Msa0301250:CDS |
TCTGCTGGTAAAGAAAACAG+AGG | 0.678817 | 2_3:+57111244 | Msa0301250:CDS |
TGTCATGTAGCTACAAGTGA+TGG | 0.680446 | 2_3:+57111719 | Msa0301250:three_prime_UTR |
AAGAACAGATGATCAAACAA+GGG | 0.681166 | 2_3:-57111523 | None:intergenic |
GAGTGAGGGTACGTAGAGGT+GGG | 0.682033 | 2_3:+57110936 | Msa0301250:CDS |
AGTAAAATCAACGATAACGA+CGG | 0.699472 | 2_3:-57111348 | None:intergenic |
TACCGAGTGAGGGTACGTAG+AGG | 0.717794 | 2_3:+57110932 | Msa0301250:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTTAATTATCAAGTTA+TGG | + | chr2_3:57111430-57111449 | Msa0301250:three_prime_UTR | 10.0% |
!! | ATAATTTAATTATCAAGTTA+TGG | + | chr2_3:57111430-57111449 | Msa0301250:three_prime_UTR | 10.0% |
!!! | TTTATTTTTGTTATTAGTAG+AGG | + | chr2_3:57111862-57111881 | Msa0301250:three_prime_UTR | 15.0% |
!!! | TTTATTTTTGTTATTAGTAG+AGG | + | chr2_3:57111862-57111881 | Msa0301250:three_prime_UTR | 15.0% |
!!! | GTTATTTGTGAATTTTGAAT+AGG | + | chr2_3:57110494-57110513 | Msa0301250:intron | 20.0% |
!! | AAACAAGCTTATTATTGATA+AGG | - | chr2_3:57110718-57110737 | None:intergenic | 20.0% |
!! | CATCAATATAAGTTCTATTA+AGG | - | chr2_3:57110853-57110872 | None:intergenic | 20.0% |
!!! | ATTTGAACTTCATTGATTTT+AGG | + | chr2_3:57110898-57110917 | Msa0301250:intron | 20.0% |
!!! | TTTGAACTTCATTGATTTTA+GGG | + | chr2_3:57110899-57110918 | Msa0301250:intron | 20.0% |
!!! | GTTATTTGTGAATTTTGAAT+AGG | + | chr2_3:57110494-57110513 | Msa0301250:intron | 20.0% |
!! | AAACAAGCTTATTATTGATA+AGG | - | chr2_3:57110718-57110737 | None:intergenic | 20.0% |
!! | CATCAATATAAGTTCTATTA+AGG | - | chr2_3:57110853-57110872 | None:intergenic | 20.0% |
!!! | ATTTGAACTTCATTGATTTT+AGG | + | chr2_3:57110898-57110917 | Msa0301250:intron | 20.0% |
!!! | TTTGAACTTCATTGATTTTA+GGG | + | chr2_3:57110899-57110918 | Msa0301250:intron | 20.0% |
! | AGAAAGAATTAAAGCATGTT+TGG | - | chr2_3:57110783-57110802 | None:intergenic | 25.0% |
! | TTACTCAACTTAAGTTTCAA+AGG | + | chr2_3:57111014-57111033 | Msa0301250:CDS | 25.0% |
! | AACAACAAAAATGAGTTTCT+AGG | - | chr2_3:57111477-57111496 | None:intergenic | 25.0% |
!!! | CTATGTTTTGCTTTGTTTTT+TGG | + | chr2_3:57111583-57111602 | Msa0301250:three_prime_UTR | 25.0% |
!!! | ATTTTTGTTATTAGTAGAGG+TGG | + | chr2_3:57111865-57111884 | Msa0301250:three_prime_UTR | 25.0% |
! | GATAGTTTGAGAATTCTTTA+GGG | + | chr2_3:57111891-57111910 | Msa0301250:three_prime_UTR | 25.0% |
! | AGAAAGAATTAAAGCATGTT+TGG | - | chr2_3:57110783-57110802 | None:intergenic | 25.0% |
! | TTACTCAACTTAAGTTTCAA+AGG | + | chr2_3:57111014-57111033 | Msa0301250:CDS | 25.0% |
! | AACAACAAAAATGAGTTTCT+AGG | - | chr2_3:57111477-57111496 | None:intergenic | 25.0% |
!!! | CTATGTTTTGCTTTGTTTTT+TGG | + | chr2_3:57111583-57111602 | Msa0301250:three_prime_UTR | 25.0% |
!!! | ATTTTTGTTATTAGTAGAGG+TGG | + | chr2_3:57111865-57111884 | Msa0301250:three_prime_UTR | 25.0% |
! | GATAGTTTGAGAATTCTTTA+GGG | + | chr2_3:57111891-57111910 | Msa0301250:three_prime_UTR | 25.0% |
!!! | CTGTTTCTATTCATTTTCTC+TGG | + | chr2_3:57110446-57110465 | Msa0301250:intron | 30.0% |
! | ACAAGTATGTTTCTGAGTTA+TGG | + | chr2_3:57110522-57110541 | Msa0301250:CDS | 30.0% |
GAATTAAAGCATGTTTGGAT+TGG | - | chr2_3:57110778-57110797 | None:intergenic | 30.0% | |
! | TTCTACCTTCAAGTATTTTG+AGG | + | chr2_3:57111120-57111139 | Msa0301250:CDS | 30.0% |
AATGACCTCAAAATACTTGA+AGG | - | chr2_3:57111128-57111147 | None:intergenic | 30.0% | |
!!! | CAAGTATTTTGAGGTCATTT+TGG | + | chr2_3:57111129-57111148 | Msa0301250:CDS | 30.0% |
AGTAAAATCAACGATAACGA+CGG | - | chr2_3:57111351-57111370 | None:intergenic | 30.0% | |
AAGAACAGATGATCAAACAA+GGG | - | chr2_3:57111526-57111545 | None:intergenic | 30.0% | |
AAAGAACAGATGATCAAACA+AGG | - | chr2_3:57111527-57111546 | None:intergenic | 30.0% | |
!!! | CTTTGTTTTTTGGATTGACA+CGG | + | chr2_3:57111593-57111612 | Msa0301250:three_prime_UTR | 30.0% |
! | GTTCTTTTGTAGCTTCAAAA+CGG | + | chr2_3:57111741-57111760 | Msa0301250:three_prime_UTR | 30.0% |
GGATAGTTTGAGAATTCTTT+AGG | + | chr2_3:57111890-57111909 | Msa0301250:three_prime_UTR | 30.0% | |
GATTACTATAATGAAGCCAA+TGG | + | chr2_3:57111931-57111950 | Msa0301250:three_prime_UTR | 30.0% | |
AAAAATTGCCTAGCATAGTT+TGG | + | chr2_3:57111964-57111983 | Msa0301250:three_prime_UTR | 30.0% | |
CAATAATTCCAAACTATGCT+AGG | - | chr2_3:57111975-57111994 | None:intergenic | 30.0% | |
!!! | CTGTTTCTATTCATTTTCTC+TGG | + | chr2_3:57110446-57110465 | Msa0301250:intron | 30.0% |
! | ACAAGTATGTTTCTGAGTTA+TGG | + | chr2_3:57110522-57110541 | Msa0301250:CDS | 30.0% |
GAATTAAAGCATGTTTGGAT+TGG | - | chr2_3:57110778-57110797 | None:intergenic | 30.0% | |
! | TTCTACCTTCAAGTATTTTG+AGG | + | chr2_3:57111120-57111139 | Msa0301250:CDS | 30.0% |
AATGACCTCAAAATACTTGA+AGG | - | chr2_3:57111128-57111147 | None:intergenic | 30.0% | |
!!! | CAAGTATTTTGAGGTCATTT+TGG | + | chr2_3:57111129-57111148 | Msa0301250:CDS | 30.0% |
AGTAAAATCAACGATAACGA+CGG | - | chr2_3:57111351-57111370 | None:intergenic | 30.0% | |
AAGAACAGATGATCAAACAA+GGG | - | chr2_3:57111526-57111545 | None:intergenic | 30.0% | |
AAAGAACAGATGATCAAACA+AGG | - | chr2_3:57111527-57111546 | None:intergenic | 30.0% | |
!!! | CTTTGTTTTTTGGATTGACA+CGG | + | chr2_3:57111593-57111612 | Msa0301250:three_prime_UTR | 30.0% |
! | GTTCTTTTGTAGCTTCAAAA+CGG | + | chr2_3:57111741-57111760 | Msa0301250:three_prime_UTR | 30.0% |
GGATAGTTTGAGAATTCTTT+AGG | + | chr2_3:57111890-57111909 | Msa0301250:three_prime_UTR | 30.0% | |
GATTACTATAATGAAGCCAA+TGG | + | chr2_3:57111931-57111950 | Msa0301250:three_prime_UTR | 30.0% | |
AAAAATTGCCTAGCATAGTT+TGG | + | chr2_3:57111964-57111983 | Msa0301250:three_prime_UTR | 30.0% | |
CAATAATTCCAAACTATGCT+AGG | - | chr2_3:57111975-57111994 | None:intergenic | 30.0% | |
! | AGTATGTTTCTGAGTTATGG+CGG | + | chr2_3:57110525-57110544 | Msa0301250:CDS | 35.0% |
AAGAATAGATGATACCTGCT+TGG | - | chr2_3:57110678-57110697 | None:intergenic | 35.0% | |
TATACAATACCCTTGGAAAC+CGG | - | chr2_3:57110971-57110990 | None:intergenic | 35.0% | |
!! | GTTTCCAAGGGTATTGTATA+CGG | + | chr2_3:57110971-57110990 | Msa0301250:CDS | 35.0% |
!! | TTTCCAAGGGTATTGTATAC+GGG | + | chr2_3:57110972-57110991 | Msa0301250:CDS | 35.0% |
GAAATGATCCAAGAATCAAC+TGG | + | chr2_3:57111176-57111195 | Msa0301250:CDS | 35.0% | |
AAAGAAAACAGAGGTTTGAG+TGG | + | chr2_3:57111253-57111272 | Msa0301250:CDS | 35.0% | |
! | TATTGTCTTGCTTCGTTTTC+TGG | + | chr2_3:57111378-57111397 | Msa0301250:three_prime_UTR | 35.0% |
AGTGCATTAGATCTAGACTT+TGG | + | chr2_3:57111407-57111426 | Msa0301250:three_prime_UTR | 35.0% | |
CTTGAAAACCCAAAAACAGT+GGG | - | chr2_3:57111624-57111643 | None:intergenic | 35.0% | |
ACTTGAAAACCCAAAAACAG+TGG | - | chr2_3:57111625-57111644 | None:intergenic | 35.0% | |
AAAACGGTAAACTATGCTCA+AGG | + | chr2_3:57111757-57111776 | Msa0301250:three_prime_UTR | 35.0% | |
AATGATGAGGTTCTTATCTC+TGG | + | chr2_3:57111790-57111809 | Msa0301250:three_prime_UTR | 35.0% | |
! | TTGTTATTAGTAGAGGTGGA+TGG | + | chr2_3:57111869-57111888 | Msa0301250:three_prime_UTR | 35.0% |
TACTATAATGAAGCCAATGG+TGG | + | chr2_3:57111934-57111953 | Msa0301250:three_prime_UTR | 35.0% | |
! | ATTTTTGCATTAGCCACCAT+TGG | - | chr2_3:57111950-57111969 | None:intergenic | 35.0% |
! | AGTATGTTTCTGAGTTATGG+CGG | + | chr2_3:57110525-57110544 | Msa0301250:CDS | 35.0% |
AAGAATAGATGATACCTGCT+TGG | - | chr2_3:57110678-57110697 | None:intergenic | 35.0% | |
TATACAATACCCTTGGAAAC+CGG | - | chr2_3:57110971-57110990 | None:intergenic | 35.0% | |
!! | GTTTCCAAGGGTATTGTATA+CGG | + | chr2_3:57110971-57110990 | Msa0301250:CDS | 35.0% |
!! | TTTCCAAGGGTATTGTATAC+GGG | + | chr2_3:57110972-57110991 | Msa0301250:CDS | 35.0% |
GAAATGATCCAAGAATCAAC+TGG | + | chr2_3:57111176-57111195 | Msa0301250:CDS | 35.0% | |
AAAGAAAACAGAGGTTTGAG+TGG | + | chr2_3:57111253-57111272 | Msa0301250:CDS | 35.0% | |
! | TATTGTCTTGCTTCGTTTTC+TGG | + | chr2_3:57111378-57111397 | Msa0301250:three_prime_UTR | 35.0% |
AGTGCATTAGATCTAGACTT+TGG | + | chr2_3:57111407-57111426 | Msa0301250:three_prime_UTR | 35.0% | |
CTTGAAAACCCAAAAACAGT+GGG | - | chr2_3:57111624-57111643 | None:intergenic | 35.0% | |
ACTTGAAAACCCAAAAACAG+TGG | - | chr2_3:57111625-57111644 | None:intergenic | 35.0% | |
AAAACGGTAAACTATGCTCA+AGG | + | chr2_3:57111757-57111776 | Msa0301250:three_prime_UTR | 35.0% | |
AATGATGAGGTTCTTATCTC+TGG | + | chr2_3:57111790-57111809 | Msa0301250:three_prime_UTR | 35.0% | |
! | TTGTTATTAGTAGAGGTGGA+TGG | + | chr2_3:57111869-57111888 | Msa0301250:three_prime_UTR | 35.0% |
TACTATAATGAAGCCAATGG+TGG | + | chr2_3:57111934-57111953 | Msa0301250:three_prime_UTR | 35.0% | |
! | ATTTTTGCATTAGCCACCAT+TGG | - | chr2_3:57111950-57111969 | None:intergenic | 35.0% |
GTGAGACAAACCGAGAAAAT+GGG | + | chr2_3:57110400-57110419 | Msa0301250:exon | 40.0% | |
! | TGGATGCATACCCATTTTCT+CGG | - | chr2_3:57110413-57110432 | None:intergenic | 40.0% |
TTATGTTGTGTACCGAGTGA+GGG | + | chr2_3:57110922-57110941 | Msa0301250:CDS | 40.0% | |
!! | ACTTAAGTTGAGTAACTCCC+TGG | - | chr2_3:57111009-57111028 | None:intergenic | 40.0% |
AGTAGGAATTGAGAACCCTA+AGG | - | chr2_3:57111087-57111106 | None:intergenic | 40.0% | |
TTAGGGTTCTCAATTCCTAC+TGG | + | chr2_3:57111086-57111105 | Msa0301250:CDS | 40.0% | |
TAGGGTTCTCAATTCCTACT+GGG | + | chr2_3:57111087-57111106 | Msa0301250:CDS | 40.0% | |
! | TTGGTAAGCCAGTTGATTCT+TGG | - | chr2_3:57111187-57111206 | None:intergenic | 40.0% |
TCTGCTGGTAAAGAAAACAG+AGG | + | chr2_3:57111244-57111263 | Msa0301250:CDS | 40.0% | |
TTCTAGGCAAAGACACAGAT+CGG | - | chr2_3:57111461-57111480 | None:intergenic | 40.0% | |
TGTCATGTAGCTACAAGTGA+TGG | + | chr2_3:57111719-57111738 | Msa0301250:three_prime_UTR | 40.0% | |
AGGCACATTGATGAATGATG+AGG | + | chr2_3:57111777-57111796 | Msa0301250:three_prime_UTR | 40.0% | |
GTGAGACAAACCGAGAAAAT+GGG | + | chr2_3:57110400-57110419 | Msa0301250:exon | 40.0% | |
! | TGGATGCATACCCATTTTCT+CGG | - | chr2_3:57110413-57110432 | None:intergenic | 40.0% |
TTATGTTGTGTACCGAGTGA+GGG | + | chr2_3:57110922-57110941 | Msa0301250:CDS | 40.0% | |
!! | ACTTAAGTTGAGTAACTCCC+TGG | - | chr2_3:57111009-57111028 | None:intergenic | 40.0% |
AGTAGGAATTGAGAACCCTA+AGG | - | chr2_3:57111087-57111106 | None:intergenic | 40.0% | |
TTAGGGTTCTCAATTCCTAC+TGG | + | chr2_3:57111086-57111105 | Msa0301250:CDS | 40.0% | |
TAGGGTTCTCAATTCCTACT+GGG | + | chr2_3:57111087-57111106 | Msa0301250:CDS | 40.0% | |
! | TTGGTAAGCCAGTTGATTCT+TGG | - | chr2_3:57111187-57111206 | None:intergenic | 40.0% |
TCTGCTGGTAAAGAAAACAG+AGG | + | chr2_3:57111244-57111263 | Msa0301250:CDS | 40.0% | |
TTCTAGGCAAAGACACAGAT+CGG | - | chr2_3:57111461-57111480 | None:intergenic | 40.0% | |
TGTCATGTAGCTACAAGTGA+TGG | + | chr2_3:57111719-57111738 | Msa0301250:three_prime_UTR | 40.0% | |
AGGCACATTGATGAATGATG+AGG | + | chr2_3:57111777-57111796 | Msa0301250:three_prime_UTR | 40.0% | |
CGTGAGACAAACCGAGAAAA+TGG | + | chr2_3:57110399-57110418 | Msa0301250:exon | 45.0% | |
GAAACAGCAGCTGCAATAGA+TGG | - | chr2_3:57110433-57110452 | None:intergenic | 45.0% | |
! | GTTATGGCGGAAGAAGCAAT+CGG | + | chr2_3:57110538-57110557 | Msa0301250:CDS | 45.0% |
GTTATGTTGTGTACCGAGTG+AGG | + | chr2_3:57110921-57110940 | Msa0301250:CDS | 45.0% | |
CTTCCCGTATACAATACCCT+TGG | - | chr2_3:57110978-57110997 | None:intergenic | 45.0% | |
TGAGTAACTCCCTGGTTAGT+GGG | - | chr2_3:57111001-57111020 | None:intergenic | 45.0% | |
TTGAGTAACTCCCTGGTTAG+TGG | - | chr2_3:57111002-57111021 | None:intergenic | 45.0% | |
CAATTCCTACTGGGTCAATG+AGG | + | chr2_3:57111096-57111115 | Msa0301250:CDS | 45.0% | |
AGAATCCTCATTGACCCAGT+AGG | - | chr2_3:57111104-57111123 | None:intergenic | 45.0% | |
CAATCCTGTCCACAAGCATA+GGG | + | chr2_3:57111204-57111223 | Msa0301250:CDS | 45.0% | |
AACAGAGGTTTGAGTGGCAA+AGG | + | chr2_3:57111259-57111278 | Msa0301250:CDS | 45.0% | |
ACAGAGGTTTGAGTGGCAAA+GGG | + | chr2_3:57111260-57111279 | Msa0301250:CDS | 45.0% | |
! | ACGGTATCACCCACTGTTTT+TGG | + | chr2_3:57111612-57111631 | Msa0301250:three_prime_UTR | 45.0% |
!! | CGGTATCACCCACTGTTTTT+GGG | + | chr2_3:57111613-57111632 | Msa0301250:three_prime_UTR | 45.0% |
CAGTAACACCTGCTCTCATT+TGG | + | chr2_3:57111672-57111691 | Msa0301250:three_prime_UTR | 45.0% | |
TTTGACAGCCAAATGAGAGC+AGG | - | chr2_3:57111683-57111702 | None:intergenic | 45.0% | |
AGGTTCTTATCTCTGGTGTC+TGG | + | chr2_3:57111797-57111816 | Msa0301250:three_prime_UTR | 45.0% | |
CGTGAGACAAACCGAGAAAA+TGG | + | chr2_3:57110399-57110418 | Msa0301250:exon | 45.0% | |
GAAACAGCAGCTGCAATAGA+TGG | - | chr2_3:57110433-57110452 | None:intergenic | 45.0% | |
! | GTTATGGCGGAAGAAGCAAT+CGG | + | chr2_3:57110538-57110557 | Msa0301250:CDS | 45.0% |
GTTATGTTGTGTACCGAGTG+AGG | + | chr2_3:57110921-57110940 | Msa0301250:CDS | 45.0% | |
CTTCCCGTATACAATACCCT+TGG | - | chr2_3:57110978-57110997 | None:intergenic | 45.0% | |
TGAGTAACTCCCTGGTTAGT+GGG | - | chr2_3:57111001-57111020 | None:intergenic | 45.0% | |
TTGAGTAACTCCCTGGTTAG+TGG | - | chr2_3:57111002-57111021 | None:intergenic | 45.0% | |
CAATTCCTACTGGGTCAATG+AGG | + | chr2_3:57111096-57111115 | Msa0301250:CDS | 45.0% | |
AGAATCCTCATTGACCCAGT+AGG | - | chr2_3:57111104-57111123 | None:intergenic | 45.0% | |
CAATCCTGTCCACAAGCATA+GGG | + | chr2_3:57111204-57111223 | Msa0301250:CDS | 45.0% | |
AACAGAGGTTTGAGTGGCAA+AGG | + | chr2_3:57111259-57111278 | Msa0301250:CDS | 45.0% | |
ACAGAGGTTTGAGTGGCAAA+GGG | + | chr2_3:57111260-57111279 | Msa0301250:CDS | 45.0% | |
! | ACGGTATCACCCACTGTTTT+TGG | + | chr2_3:57111612-57111631 | Msa0301250:three_prime_UTR | 45.0% |
!! | CGGTATCACCCACTGTTTTT+GGG | + | chr2_3:57111613-57111632 | Msa0301250:three_prime_UTR | 45.0% |
CAGTAACACCTGCTCTCATT+TGG | + | chr2_3:57111672-57111691 | Msa0301250:three_prime_UTR | 45.0% | |
TTTGACAGCCAAATGAGAGC+AGG | - | chr2_3:57111683-57111702 | None:intergenic | 45.0% | |
AGGTTCTTATCTCTGGTGTC+TGG | + | chr2_3:57111797-57111816 | Msa0301250:three_prime_UTR | 45.0% | |
! | TTTCTCGGTTTGTCTCACGC+TGG | - | chr2_3:57110398-57110417 | None:intergenic | 50.0% |
TGAGATTCATGCAGCGTGTG+AGG | + | chr2_3:57110567-57110586 | Msa0301250:CDS | 50.0% | |
!! | GCTTGGCCTTGTAACCCAAA+CGG | - | chr2_3:57110661-57110680 | None:intergenic | 50.0% |
! | TTTGGGTTACAAGGCCAAGC+AGG | + | chr2_3:57110661-57110680 | Msa0301250:CDS | 50.0% |
TACGTAGAGGTGGGAGAAAG+AGG | + | chr2_3:57110945-57110964 | Msa0301250:CDS | 50.0% | |
! | AGAAAGAGGCCGGTTTCCAA+GGG | + | chr2_3:57110959-57110978 | Msa0301250:CDS | 50.0% |
GAGTAAGAGATCTGTTGCCG+AGG | + | chr2_3:57111036-57111055 | Msa0301250:CDS | 50.0% | |
CCTATGCTTGTGGACAGGAT+TGG | - | chr2_3:57111206-57111225 | None:intergenic | 50.0% | |
CCAATCCTGTCCACAAGCAT+AGG | + | chr2_3:57111203-57111222 | Msa0301250:CDS | 50.0% | |
AGTTCCCTATGCTTGTGGAC+AGG | - | chr2_3:57111211-57111230 | None:intergenic | 50.0% | |
CACGAAGTTCCCTATGCTTG+TGG | - | chr2_3:57111216-57111235 | None:intergenic | 50.0% | |
CACAAGCATAGGGAACTTCG+TGG | + | chr2_3:57111214-57111233 | Msa0301250:CDS | 50.0% | |
! | TTTCTCGGTTTGTCTCACGC+TGG | - | chr2_3:57110398-57110417 | None:intergenic | 50.0% |
TGAGATTCATGCAGCGTGTG+AGG | + | chr2_3:57110567-57110586 | Msa0301250:CDS | 50.0% | |
!! | GCTTGGCCTTGTAACCCAAA+CGG | - | chr2_3:57110661-57110680 | None:intergenic | 50.0% |
! | TTTGGGTTACAAGGCCAAGC+AGG | + | chr2_3:57110661-57110680 | Msa0301250:CDS | 50.0% |
TACGTAGAGGTGGGAGAAAG+AGG | + | chr2_3:57110945-57110964 | Msa0301250:CDS | 50.0% | |
! | AGAAAGAGGCCGGTTTCCAA+GGG | + | chr2_3:57110959-57110978 | Msa0301250:CDS | 50.0% |
GAGTAAGAGATCTGTTGCCG+AGG | + | chr2_3:57111036-57111055 | Msa0301250:CDS | 50.0% | |
CCTATGCTTGTGGACAGGAT+TGG | - | chr2_3:57111206-57111225 | None:intergenic | 50.0% | |
CCAATCCTGTCCACAAGCAT+AGG | + | chr2_3:57111203-57111222 | Msa0301250:CDS | 50.0% | |
AGTTCCCTATGCTTGTGGAC+AGG | - | chr2_3:57111211-57111230 | None:intergenic | 50.0% | |
CACGAAGTTCCCTATGCTTG+TGG | - | chr2_3:57111216-57111235 | None:intergenic | 50.0% | |
CACAAGCATAGGGAACTTCG+TGG | + | chr2_3:57111214-57111233 | Msa0301250:CDS | 50.0% | |
TCATGCAGCGTGTGAGGTGT+TGG | + | chr2_3:57110573-57110592 | Msa0301250:CDS | 55.0% | |
! | CATGCAGCGTGTGAGGTGTT+GGG | + | chr2_3:57110574-57110593 | Msa0301250:CDS | 55.0% |
GGGTCTGGTGAGACGAACAA+TGG | - | chr2_3:57110618-57110637 | None:intergenic | 55.0% | |
TTTGTCAGGACGAGTGGGTC+TGG | - | chr2_3:57110633-57110652 | None:intergenic | 55.0% | |
! | CGAGCTTTGTCAGGACGAGT+GGG | - | chr2_3:57110638-57110657 | None:intergenic | 55.0% |
TCCTGACAAAGCTCGCCGTT+TGG | + | chr2_3:57110643-57110662 | Msa0301250:CDS | 55.0% | |
CCTGACAAAGCTCGCCGTTT+GGG | + | chr2_3:57110644-57110663 | Msa0301250:CDS | 55.0% | |
! | AGCTCGCCGTTTGGGTTACA+AGG | + | chr2_3:57110652-57110671 | Msa0301250:CDS | 55.0% |
! | TACCGAGTGAGGGTACGTAG+AGG | + | chr2_3:57110932-57110951 | Msa0301250:CDS | 55.0% |
CACCTCTACGTACCCTCACT+CGG | - | chr2_3:57110937-57110956 | None:intergenic | 55.0% | |
! | GAGTGAGGGTACGTAGAGGT+GGG | + | chr2_3:57110936-57110955 | Msa0301250:CDS | 55.0% |
TAGAGGTGGGAGAAAGAGGC+CGG | + | chr2_3:57110949-57110968 | Msa0301250:CDS | 55.0% | |
! | GAGAAAGAGGCCGGTTTCCA+AGG | + | chr2_3:57110958-57110977 | Msa0301250:CDS | 55.0% |
ATACGGGAAGCCCACTAACC+AGG | + | chr2_3:57110988-57111007 | Msa0301250:CDS | 55.0% | |
TACGGGAAGCCCACTAACCA+GGG | + | chr2_3:57110989-57111008 | Msa0301250:CDS | 55.0% | |
! | GAGGAAGCTTGGTGGCCTTA+GGG | + | chr2_3:57111069-57111088 | Msa0301250:CDS | 55.0% |
CTTCGTGGTCTCACTTCTGC+TGG | + | chr2_3:57111229-57111248 | Msa0301250:CDS | 55.0% | |
AGTTTGCCCTGCGAGATGGA+CGG | - | chr2_3:57111303-57111322 | None:intergenic | 55.0% | |
TTCCAGTTTGCCCTGCGAGA+TGG | - | chr2_3:57111307-57111326 | None:intergenic | 55.0% | |
TCATGCAGCGTGTGAGGTGT+TGG | + | chr2_3:57110573-57110592 | Msa0301250:CDS | 55.0% | |
! | CATGCAGCGTGTGAGGTGTT+GGG | + | chr2_3:57110574-57110593 | Msa0301250:CDS | 55.0% |
GGGTCTGGTGAGACGAACAA+TGG | - | chr2_3:57110618-57110637 | None:intergenic | 55.0% | |
TTTGTCAGGACGAGTGGGTC+TGG | - | chr2_3:57110633-57110652 | None:intergenic | 55.0% | |
! | CGAGCTTTGTCAGGACGAGT+GGG | - | chr2_3:57110638-57110657 | None:intergenic | 55.0% |
TCCTGACAAAGCTCGCCGTT+TGG | + | chr2_3:57110643-57110662 | Msa0301250:CDS | 55.0% | |
CCTGACAAAGCTCGCCGTTT+GGG | + | chr2_3:57110644-57110663 | Msa0301250:CDS | 55.0% | |
! | AGCTCGCCGTTTGGGTTACA+AGG | + | chr2_3:57110652-57110671 | Msa0301250:CDS | 55.0% |
! | TACCGAGTGAGGGTACGTAG+AGG | + | chr2_3:57110932-57110951 | Msa0301250:CDS | 55.0% |
CACCTCTACGTACCCTCACT+CGG | - | chr2_3:57110937-57110956 | None:intergenic | 55.0% | |
! | GAGTGAGGGTACGTAGAGGT+GGG | + | chr2_3:57110936-57110955 | Msa0301250:CDS | 55.0% |
TAGAGGTGGGAGAAAGAGGC+CGG | + | chr2_3:57110949-57110968 | Msa0301250:CDS | 55.0% | |
! | GAGAAAGAGGCCGGTTTCCA+AGG | + | chr2_3:57110958-57110977 | Msa0301250:CDS | 55.0% |
ATACGGGAAGCCCACTAACC+AGG | + | chr2_3:57110988-57111007 | Msa0301250:CDS | 55.0% | |
TACGGGAAGCCCACTAACCA+GGG | + | chr2_3:57110989-57111008 | Msa0301250:CDS | 55.0% | |
! | GAGGAAGCTTGGTGGCCTTA+GGG | + | chr2_3:57111069-57111088 | Msa0301250:CDS | 55.0% |
CTTCGTGGTCTCACTTCTGC+TGG | + | chr2_3:57111229-57111248 | Msa0301250:CDS | 55.0% | |
AGTTTGCCCTGCGAGATGGA+CGG | - | chr2_3:57111303-57111322 | None:intergenic | 55.0% | |
TTCCAGTTTGCCCTGCGAGA+TGG | - | chr2_3:57111307-57111326 | None:intergenic | 55.0% | |
! | TCGGTTTGTCTCACGCTGGC+AGG | - | chr2_3:57110394-57110413 | None:intergenic | 60.0% |
! | GCGAGCTTTGTCAGGACGAG+TGG | - | chr2_3:57110639-57110658 | None:intergenic | 60.0% |
! | CCCAAACGGCGAGCTTTGTC+AGG | - | chr2_3:57110647-57110666 | None:intergenic | 60.0% |
! | CGAGTGAGGGTACGTAGAGG+TGG | + | chr2_3:57110935-57110954 | Msa0301250:CDS | 60.0% |
! | GGAGGAAGCTTGGTGGCCTT+AGG | + | chr2_3:57111068-57111087 | Msa0301250:CDS | 60.0% |
! | TGCGAGATGGACGGGCTTTG+TGG | - | chr2_3:57111294-57111313 | None:intergenic | 60.0% |
ACAAAGCCCGTCCATCTCGC+AGG | + | chr2_3:57111293-57111312 | Msa0301250:CDS | 60.0% | |
CAAAGCCCGTCCATCTCGCA+GGG | + | chr2_3:57111294-57111313 | Msa0301250:CDS | 60.0% | |
GTTTGCCCTGCGAGATGGAC+GGG | - | chr2_3:57111302-57111321 | None:intergenic | 60.0% | |
GTCCATCTCGCAGGGCAAAC+TGG | + | chr2_3:57111302-57111321 | Msa0301250:CDS | 60.0% | |
! | TCGGTTTGTCTCACGCTGGC+AGG | - | chr2_3:57110394-57110413 | None:intergenic | 60.0% |
! | GCGAGCTTTGTCAGGACGAG+TGG | - | chr2_3:57110639-57110658 | None:intergenic | 60.0% |
! | CCCAAACGGCGAGCTTTGTC+AGG | - | chr2_3:57110647-57110666 | None:intergenic | 60.0% |
! | CGAGTGAGGGTACGTAGAGG+TGG | + | chr2_3:57110935-57110954 | Msa0301250:CDS | 60.0% |
! | GGAGGAAGCTTGGTGGCCTT+AGG | + | chr2_3:57111068-57111087 | Msa0301250:CDS | 60.0% |
! | TGCGAGATGGACGGGCTTTG+TGG | - | chr2_3:57111294-57111313 | None:intergenic | 60.0% |
ACAAAGCCCGTCCATCTCGC+AGG | + | chr2_3:57111293-57111312 | Msa0301250:CDS | 60.0% | |
CAAAGCCCGTCCATCTCGCA+GGG | + | chr2_3:57111294-57111313 | Msa0301250:CDS | 60.0% | |
GTTTGCCCTGCGAGATGGAC+GGG | - | chr2_3:57111302-57111321 | None:intergenic | 60.0% | |
GTCCATCTCGCAGGGCAAAC+TGG | + | chr2_3:57111302-57111321 | Msa0301250:CDS | 60.0% | |
! | TCTGTTGCCGAGGAGCGTGC+TGG | + | chr2_3:57111046-57111065 | Msa0301250:CDS | 65.0% |
! | CTGTTGCCGAGGAGCGTGCT+GGG | + | chr2_3:57111047-57111066 | Msa0301250:CDS | 65.0% |
CTTCCTCCCAGCACGCTCCT+CGG | - | chr2_3:57111056-57111075 | None:intergenic | 65.0% | |
GAGCGTGCTGGGAGGAAGCT+TGG | + | chr2_3:57111058-57111077 | Msa0301250:CDS | 65.0% | |
CGTGCTGGGAGGAAGCTTGG+TGG | + | chr2_3:57111061-57111080 | Msa0301250:CDS | 65.0% | |
! | TCTGTTGCCGAGGAGCGTGC+TGG | + | chr2_3:57111046-57111065 | Msa0301250:CDS | 65.0% |
! | CTGTTGCCGAGGAGCGTGCT+GGG | + | chr2_3:57111047-57111066 | Msa0301250:CDS | 65.0% |
CTTCCTCCCAGCACGCTCCT+CGG | - | chr2_3:57111056-57111075 | None:intergenic | 65.0% | |
GAGCGTGCTGGGAGGAAGCT+TGG | + | chr2_3:57111058-57111077 | Msa0301250:CDS | 65.0% | |
CGTGCTGGGAGGAAGCTTGG+TGG | + | chr2_3:57111061-57111080 | Msa0301250:CDS | 65.0% | |
! | TTGCCGAGGAGCGTGCTGGG+AGG | + | chr2_3:57111050-57111069 | Msa0301250:CDS | 70.0% |
! | TTGCCGAGGAGCGTGCTGGG+AGG | + | chr2_3:57111050-57111069 | Msa0301250:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 57110383 | 57112052 | 57110383 | ID=Msa0301250;Name=Msa0301250 |
chr2_3 | mRNA | 57110383 | 57112052 | 57110383 | ID=Msa0301250-mRNA-1;Parent=Msa0301250;Name=Msa0301250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=35|1|1|1|1|1|3|689|204 |
chr2_3 | exon | 57110383 | 57110421 | 57110383 | ID=Msa0301250-mRNA-1:exon:18381;Parent=Msa0301250-mRNA-1 |
chr2_3 | exon | 57110516 | 57110682 | 57110516 | ID=Msa0301250-mRNA-1:exon:18382;Parent=Msa0301250-mRNA-1 |
chr2_3 | exon | 57110920 | 57112052 | 57110920 | ID=Msa0301250-mRNA-1:exon:18383;Parent=Msa0301250-mRNA-1 |
chr2_3 | five_prime_UTR | 57110383 | 57110417 | 57110383 | ID=Msa0301250-mRNA-1:five_prime_utr;Parent=Msa0301250-mRNA-1 |
chr2_3 | CDS | 57110418 | 57110421 | 57110418 | ID=Msa0301250-mRNA-1:cds;Parent=Msa0301250-mRNA-1 |
chr2_3 | CDS | 57110516 | 57110682 | 57110516 | ID=Msa0301250-mRNA-1:cds;Parent=Msa0301250-mRNA-1 |
chr2_3 | CDS | 57110920 | 57111363 | 57110920 | ID=Msa0301250-mRNA-1:cds;Parent=Msa0301250-mRNA-1 |
chr2_3 | three_prime_UTR | 57111364 | 57112052 | 57111364 | ID=Msa0301250-mRNA-1:three_prime_utr;Parent=Msa0301250-mRNA-1 |
Gene Sequence |
Protein sequence |