Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589160 | XP_003604568.1 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589160 | sp|P46300|RS4_SOLTU | 91.288 | 264 | 23 | 0 | 1 | 264 | 1 | 264 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0116600 | Msa0589160 | 0.824538 | 7.644030e-54 | -8.615850e-47 |
| Msa0116690 | Msa0589160 | 0.816387 | 5.676765e-52 | -8.615850e-47 |
| Msa0132460 | Msa0589160 | 0.819201 | 1.315408e-52 | -8.615850e-47 |
| Msa0182050 | Msa0589160 | 0.824741 | 6.847840e-54 | -8.615850e-47 |
| Msa0182100 | Msa0589160 | 0.807243 | 5.559617e-50 | -8.615850e-47 |
| Msa0188740 | Msa0589160 | 0.803144 | 4.009615e-49 | -8.615850e-47 |
| Msa0192300 | Msa0589160 | 0.843091 | 1.734066e-58 | -8.615850e-47 |
| Msa0482560 | Msa0589160 | 0.819140 | 1.357757e-52 | -8.615850e-47 |
| Msa0270160 | Msa0589160 | 0.820092 | 8.231414e-53 | -8.615850e-47 |
| Msa0301250 | Msa0589160 | 0.843949 | 1.023037e-58 | -8.615850e-47 |
| Msa0313060 | Msa0589160 | 0.829123 | 6.138295e-55 | -8.615850e-47 |
| Msa0563540 | Msa0589160 | 0.990233 | 1.128135e-181 | -8.615850e-47 |
| Msa0573550 | Msa0589160 | 0.809068 | 2.271426e-50 | -8.615850e-47 |
| Msa0578010 | Msa0589160 | 0.853289 | 2.636507e-61 | -8.615850e-47 |
| Msa0589160 | Msa0629280 | 0.864516 | 1.149611e-64 | -8.615850e-47 |
| Msa0589160 | Msa0656450 | 0.828870 | 7.069296e-55 | -8.615850e-47 |
| Msa0589160 | Msa0667110 | 0.935805 | 4.752114e-97 | -8.615850e-47 |
| Msa0589160 | Msa0694400 | 0.808719 | 2.697347e-50 | -8.615850e-47 |
| Msa0589160 | Msa0708630 | 0.821546 | 3.812521e-53 | -8.615850e-47 |
| Msa0589160 | Msa0930100 | 0.831394 | 1.711490e-55 | -8.615850e-47 |
| Msa0589160 | Msa0930360 | 0.850687 | 1.445367e-60 | -8.615850e-47 |
| Msa0589160 | Msa0930790 | 0.819675 | 1.025165e-52 | -8.615850e-47 |
| Msa0589160 | Msa1126690 | 0.834418 | 3.032118e-56 | -8.615850e-47 |
| Msa0589160 | Msa1144630 | 0.801035 | 1.088785e-48 | -8.615850e-47 |
| Msa0589160 | Msa1237040 | 0.807950 | 3.935291e-50 | -8.615850e-47 |
| Msa0589160 | Msa1255830 | 0.804025 | 2.632919e-49 | -8.615850e-47 |
| Msa0589160 | Msa1255850 | 0.802090 | 6.616912e-49 | -8.615850e-47 |
| Msa0589160 | Msa1317390 | 0.821245 | 4.473927e-53 | -8.615850e-47 |
| Msa0589160 | Msa1363930 | 0.800158 | 1.643163e-48 | -8.615850e-47 |
| Msa0589160 | Msa1385480 | 0.809390 | 1.937233e-50 | -8.615850e-47 |
| Msa0589160 | Msa1403520 | 0.809445 | 1.886077e-50 | -8.615850e-47 |
| Msa0589160 | Msa1413570 | 0.833253 | 5.930629e-56 | -8.615850e-47 |
| Msa0589160 | Msa1424570 | 0.808734 | 2.677359e-50 | -8.615850e-47 |
| Msa0589160 | Msa1450560 | 0.800448 | 1.434543e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589160 | MtrunA17_Chr4g0005611 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Msa0589160 | MtrunA17_Chr7g0243211 | 96.863 | 255 | 8 | 0 | 1 | 255 | 1 | 255 | 0.0 | 510 |
| Msa0589160 | MtrunA17_Chr5g0403311 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| Msa0589160 | MtrunA17_Chr8g0357951 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589160 | AT2G17360.1 | 91.188 | 261 | 23 | 0 | 1 | 261 | 1 | 261 | 0.0 | 507 |
| Msa0589160 | AT5G07090.1 | 90.840 | 262 | 24 | 0 | 1 | 262 | 1 | 262 | 0.0 | 507 |
| Msa0589160 | AT5G58420.1 | 90.840 | 262 | 24 | 0 | 1 | 262 | 1 | 262 | 0.0 | 507 |
| Msa0589160 | AT5G07090.3 | 90.909 | 242 | 22 | 0 | 19 | 260 | 1 | 242 | 7.79e-170 | 469 |
| Msa0589160 | AT5G07090.2 | 90.909 | 242 | 22 | 0 | 19 | 260 | 1 | 242 | 7.79e-170 | 469 |
| Msa0589160 | AT2G17360.2 | 91.713 | 181 | 15 | 0 | 1 | 181 | 1 | 181 | 2.07e-125 | 354 |
Find 101 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTGAAAGCATGTTATT+AGG | 0.176407 | 4_2:+11758406 | Msa0589160:three_prime_UTR |
| AATTGCCTTTACAAATATTA+TGG | 0.233312 | 4_2:+11758288 | Msa0589160:three_prime_UTR |
| TTGATCCGTTGTACAAACTA+TGG | 0.301620 | 4_2:+11758379 | Msa0589160:three_prime_UTR |
| GAATTGAAAGCATGTTATTA+GGG | 0.311610 | 4_2:+11758407 | Msa0589160:three_prime_UTR |
| AAAATTTAGAAGAAAATAAT+AGG | 0.317551 | 4_2:-11758326 | None:intergenic |
| TTGTCAAGCATCCAATGTTT+TGG | 0.326410 | 4_2:-11755001 | None:intergenic |
| CTATCCAGATCCACTAATTA+AGG | 0.332244 | 4_2:+11757792 | Msa0589160:CDS |
| GACATATCCCGCTGGTTTCA+TGG | 0.336653 | 4_2:+11755294 | Msa0589160:CDS |
| CAGCGTCATGTTCTTGTTGA+TGG | 0.345107 | 4_2:+11755253 | Msa0589160:CDS |
| TTGGGCAATGTGTTTACTAT+TGG | 0.359690 | 4_2:+11758012 | Msa0589160:CDS |
| GGGAATGTTGTCATGGTTAC+CGG | 0.387189 | 4_2:+11757880 | Msa0589160:CDS |
| GCGGATGGTGCGACCATCAT+AGG | 0.388644 | 4_2:-11757770 | None:intergenic |
| TTGGCCTTAATTAGTGGATC+TGG | 0.396571 | 4_2:-11757796 | None:intergenic |
| GGTTCCGTCTCCACTCTGTC+AGG | 0.404000 | 4_2:+11755487 | Msa0589160:CDS |
| TTCCGCCGTGGGTGGGTGGG+TGG | 0.404316 | 4_2:-11753574 | None:intergenic |
| GACTTGTGGGGTCCAGATGA+TGG | 0.410304 | 4_2:-11755145 | None:intergenic |
| CATGAGTTTGCCACTCGGTT+GGG | 0.410419 | 4_2:+11757994 | Msa0589160:CDS |
| GTGTCATTGGCCTTAATTAG+TGG | 0.410495 | 4_2:-11757802 | None:intergenic |
| CGTTGTACAAACTATGGTTA+AGG | 0.431216 | 4_2:+11758385 | Msa0589160:three_prime_UTR |
| TGGGGTCCAGATGATGGCTT+TGG | 0.432297 | 4_2:-11755139 | None:intergenic |
| TCTAATATATTTCAGGCAAG+AGG | 0.436290 | 4_2:+11754947 | Msa0589160:intron |
| GTCAAGCTTGATGGTGTCAT+TGG | 0.437148 | 4_2:-11757815 | None:intergenic |
| TGAGTTCCGCCGTGGGTGGG+TGG | 0.438905 | 4_2:-11753578 | None:intergenic |
| CATTGGATGCTTGACAAACT+TGG | 0.449684 | 4_2:+11755007 | Msa0589160:CDS |
| AAGGCACTCCCTTGACTTGT+GGG | 0.458121 | 4_2:-11755158 | None:intergenic |
| AAAGTTCGATCTGTTCAATT+CGG | 0.459883 | 4_2:+11757721 | Msa0589160:CDS |
| TCCGCCGTGGGTGGGTGGGT+GGG | 0.463063 | 4_2:-11753573 | None:intergenic |
| GAGTTCCGCCGTGGGTGGGT+GGG | 0.468937 | 4_2:-11753577 | None:intergenic |
| GAGATGAGTTCCGCCGTGGG+TGG | 0.469595 | 4_2:-11753582 | None:intergenic |
| CAGGCACCAAAGCCATCATC+TGG | 0.471057 | 4_2:+11755133 | Msa0589160:intron |
| TCATGAGTTTGCCACTCGGT+TGG | 0.474930 | 4_2:+11757993 | Msa0589160:CDS |
| CATATTTCAGTCTGTTTCGC+AGG | 0.481155 | 4_2:-11755195 | None:intergenic |
| TCAGTCTGTTTCGCAGGATG+AGG | 0.485002 | 4_2:-11755189 | None:intergenic |
| CAAGAACAGAGAGAAACATA+AGG | 0.485349 | 4_2:+11757933 | Msa0589160:CDS |
| ACCATCATAGGTGTTCAGAT+AGG | 0.491470 | 4_2:-11757758 | None:intergenic |
| ATCTGTTCAATTCGGACAGA+AGG | 0.492212 | 4_2:+11757729 | Msa0589160:CDS |
| TTCTTGTTGATGGCAAGGTT+AGG | 0.493369 | 4_2:+11755263 | Msa0589160:CDS |
| CCGTTGCGTGATGTTTAACA+TGG | 0.493445 | 4_2:+11758354 | Msa0589160:three_prime_UTR |
| CCCTATCTGAACACCTATGA+TGG | 0.494508 | 4_2:+11757757 | Msa0589160:CDS |
| ACATATCCCGCTGGTTTCAT+GGG | 0.495686 | 4_2:+11755295 | Msa0589160:CDS |
| GTATCTCTTCCCAAGGGAAA+AGG | 0.504057 | 4_2:+11758054 | Msa0589160:CDS |
| TTGGCAAGGGAACAAAGCCT+TGG | 0.509969 | 4_2:+11758031 | Msa0589160:CDS |
| GAAGGCACTCCCTTGACTTG+TGG | 0.511811 | 4_2:-11755159 | None:intergenic |
| CAAGTTGACTGTTATTGAAG+AGG | 0.512862 | 4_2:+11758080 | Msa0589160:CDS |
| GACTCAATGCTCCAAAACAT+TGG | 0.516338 | 4_2:+11754990 | Msa0589160:CDS |
| AGATGAGTTCCGCCGTGGGT+GGG | 0.518047 | 4_2:-11753581 | None:intergenic |
| TGTCACCATAATATTTGTAA+AGG | 0.520224 | 4_2:-11758293 | None:intergenic |
| CCATCATAGGTGTTCAGATA+GGG | 0.524783 | 4_2:-11757757 | None:intergenic |
| CAATGTGTTTACTATTGGCA+AGG | 0.529290 | 4_2:+11758017 | Msa0589160:CDS |
| TCATGTTCTTGTTGATGGCA+AGG | 0.537954 | 4_2:+11755258 | Msa0589160:CDS |
| TGAAGAGGCTAGAAAGAGGC+AGG | 0.540159 | 4_2:+11758095 | Msa0589160:CDS |
| CATCTGGACCCCACAAGTCA+AGG | 0.541796 | 4_2:+11755149 | Msa0589160:CDS |
| CTAATATATTTCAGGCAAGA+GGG | 0.544568 | 4_2:+11754948 | Msa0589160:intron |
| TGGCAAGGGAACAAAGCCTT+GGG | 0.546208 | 4_2:+11758032 | Msa0589160:CDS |
| ACGACCTCTATTCCTTCCTC+CGG | 0.553480 | 4_2:-11757899 | None:intergenic |
| AAGAACAGAGAGAAACATAA+GGG | 0.554158 | 4_2:+11757934 | Msa0589160:CDS |
| GCCTTGGGTATCTCTTCCCA+AGG | 0.555309 | 4_2:+11758047 | Msa0589160:CDS |
| TGATGTGGGGAATGTTGTCA+TGG | 0.557070 | 4_2:+11757873 | Msa0589160:CDS |
| TGAACCCACCCACCCACCCA+CGG | 0.561542 | 4_2:+11753569 | Msa0589160:five_prime_UTR |
| GTTCCGTCTCCACTCTGTCA+GGG | 0.573710 | 4_2:+11755488 | Msa0589160:CDS |
| AACATGACGCTGCATCAAGA+TGG | 0.573994 | 4_2:-11755242 | None:intergenic |
| GACCACTTGCATCCTGAACA+TGG | 0.574639 | 4_2:-11757972 | None:intergenic |
| CATCCCTGACAGAGTGGAGA+CGG | 0.578629 | 4_2:-11755491 | None:intergenic |
| CACATACCCATGAAACCAGC+GGG | 0.579767 | 4_2:-11755301 | None:intergenic |
| GTGGAGACGGAACCGACCCT+TGG | 0.581652 | 4_2:-11755478 | None:intergenic |
| CCACTCTGTCAGGGATGATG+AGG | 0.582420 | 4_2:+11755497 | Msa0589160:CDS |
| TTGTCATGGTTACCGGAGGA+AGG | 0.582711 | 4_2:+11757887 | Msa0589160:CDS |
| TGGATGCTTGACAAACTTGG+TGG | 0.583185 | 4_2:+11755010 | Msa0589160:CDS |
| TGTCAGGGATGATGAGGCAA+AGG | 0.594932 | 4_2:+11755503 | Msa0589160:CDS |
| ATCAGAGATGAGTTCCGCCG+TGG | 0.595126 | 4_2:-11753586 | None:intergenic |
| ATCTGGACCCCACAAGTCAA+GGG | 0.597269 | 4_2:+11755150 | Msa0589160:CDS |
| TCTGTTCAATTCGGACAGAA+GGG | 0.598687 | 4_2:+11757730 | Msa0589160:CDS |
| AGGCACTCCCTTGACTTGTG+GGG | 0.598802 | 4_2:-11755157 | None:intergenic |
| GTTACCGGAGGAAGGAATAG+AGG | 0.602203 | 4_2:+11757895 | Msa0589160:CDS |
| TTTCGCAGGATGAGGATCAA+AGG | 0.605453 | 4_2:-11755181 | None:intergenic |
| CGTCTTCTGTATGACACCAA+GGG | 0.605611 | 4_2:+11755462 | Msa0589160:CDS |
| TTATTGAAGAGGCTAGAAAG+AGG | 0.605630 | 4_2:+11758091 | Msa0589160:CDS |
| CCGTCTTCTGTATGACACCA+AGG | 0.606098 | 4_2:+11755461 | Msa0589160:CDS |
| CCTTGGTGTCATACAGAAGA+CGG | 0.610727 | 4_2:-11755461 | None:intergenic |
| AATGTGTTTACTATTGGCAA+GGG | 0.614045 | 4_2:+11758018 | Msa0589160:CDS |
| CCTCATCATCCCTGACAGAG+TGG | 0.614659 | 4_2:-11755497 | None:intergenic |
| GGAAGGAATAGAGGTCGTGT+TGG | 0.618743 | 4_2:+11757904 | Msa0589160:CDS |
| GTGGTCATGAGTTTGCCACT+CGG | 0.619011 | 4_2:+11757989 | Msa0589160:CDS |
| CTTAACCATAGTTTGTACAA+CGG | 0.622570 | 4_2:-11758384 | None:intergenic |
| CAAAAGGTAACGAACCATGT+TGG | 0.626237 | 4_2:-11753627 | None:intergenic |
| TTCTGTATGACACCAAGGGT+CGG | 0.629625 | 4_2:+11755466 | Msa0589160:CDS |
| TAGTGGATCTGGATAGCGGA+TGG | 0.630246 | 4_2:-11757785 | None:intergenic |
| TCAGAGATGAGTTCCGCCGT+GGG | 0.640304 | 4_2:-11753585 | None:intergenic |
| AATTGAAAGCATGTTATTAG+GGG | 0.644736 | 4_2:+11758408 | Msa0589160:three_prime_UTR |
| GCAGGATGAGGATCAAAGGA+AGG | 0.644782 | 4_2:-11755177 | None:intergenic |
| TAATTAGTGGATCTGGATAG+CGG | 0.647434 | 4_2:-11757789 | None:intergenic |
| ATCCATGTTCAGGATGCAAG+TGG | 0.648183 | 4_2:+11757970 | Msa0589160:CDS |
| CCATGTTAAACATCACGCAA+CGG | 0.648515 | 4_2:-11758354 | None:intergenic |
| CCCTTGGGAAGAGATACCCA+AGG | 0.659442 | 4_2:-11758048 | None:intergenic |
| CCTTGGGTATCTCTTCCCAA+GGG | 0.683663 | 4_2:+11758048 | Msa0589160:CDS |
| ACAGACAAGACATATCCCGC+TGG | 0.683859 | 4_2:+11755286 | Msa0589160:CDS |
| AATGTTGTCATGGTTACCGG+AGG | 0.684540 | 4_2:+11757883 | Msa0589160:CDS |
| GCACATACCCATGAAACCAG+CGG | 0.695365 | 4_2:-11755302 | None:intergenic |
| ACCCACCCACCCACCCACGG+CGG | 0.705234 | 4_2:+11753572 | Msa0589160:five_prime_UTR |
| AAACACATTGCCCAACCGAG+TGG | 0.706925 | 4_2:-11758004 | None:intergenic |
| TTCAGCACAAGACTCCAACA+TGG | 0.710792 | 4_2:+11753613 | Msa0589160:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATAAAAAAAAA+GGG | - | chr4_2:11758216-11758235 | None:intergenic | 0.0% |
| !! | TAAAAAAAAAATAAAAAAAA+AGG | - | chr4_2:11758217-11758236 | None:intergenic | 0.0% |
| !!! | ATGTTTTTCAATAAAAAAAA+AGG | + | chr4_2:11753754-11753773 | Msa0589160:intron | 10.0% |
| !! | AAAATTTAGAAGAAAATAAT+AGG | - | chr4_2:11758329-11758348 | None:intergenic | 10.0% |
| !! | AAAATGTATCATAAAATCTA+GGG | - | chr4_2:11754822-11754841 | None:intergenic | 15.0% |
| !! | TAAAATGTATCATAAAATCT+AGG | - | chr4_2:11754823-11754842 | None:intergenic | 15.0% |
| !! | TAGTTATAAATTAGAATATG+AGG | - | chr4_2:11754926-11754945 | None:intergenic | 15.0% |
| !! | TTAGAAAAAAATTAATCAGT+GGG | - | chr4_2:11755390-11755409 | None:intergenic | 15.0% |
| !! | ATTAGAAAAAAATTAATCAG+TGG | - | chr4_2:11755391-11755410 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAATACAAG+GGG | - | chr4_2:11755580-11755599 | None:intergenic | 15.0% |
| !! | GCAAAAAAAAAAAAATACAA+GGG | - | chr4_2:11755581-11755600 | None:intergenic | 15.0% |
| !! | TGCAAAAAAAAAAAAATACA+AGG | - | chr4_2:11755582-11755601 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | - | chr4_2:11756709-11756728 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | + | chr4_2:11756708-11756727 | Msa0589160:intron | 15.0% |
| !!! | TTTCTTATATTCTTTCATTT+TGG | + | chr4_2:11757683-11757702 | Msa0589160:intron | 15.0% |
| !! | CAATAAAAAAAAAGGTTTGA+TGG | + | chr4_2:11753762-11753781 | Msa0589160:intron | 20.0% |
| !! | TCATGTTATGTTATAACATA+TGG | + | chr4_2:11753804-11753823 | Msa0589160:intron | 20.0% |
| !!! | TCAAACAAGGTTTATTATTT+TGG | + | chr4_2:11754294-11754313 | Msa0589160:intron | 20.0% |
| !!! | CAAACAAGGTTTATTATTTT+GGG | + | chr4_2:11754295-11754314 | Msa0589160:intron | 20.0% |
| !! | CAAAAATCAAGAAATCTTTA+TGG | - | chr4_2:11754363-11754382 | None:intergenic | 20.0% |
| !! | TCTTTCATTGAAAACATTTA+TGG | - | chr4_2:11754561-11754580 | None:intergenic | 20.0% |
| !!! | TTTTGTAACAATGTTTTCAT+TGG | + | chr4_2:11754858-11754877 | Msa0589160:intron | 20.0% |
| !! | TAACTACTCTAATATATTTC+AGG | + | chr4_2:11754940-11754959 | Msa0589160:intron | 20.0% |
| !! | CTTAAAAAGATCTTAACTTA+CGG | - | chr4_2:11755719-11755738 | None:intergenic | 20.0% |
| !! | ATTGAAATATAGTTATGGTA+AGG | - | chr4_2:11757647-11757666 | None:intergenic | 20.0% |
| !! | GAACAATTGAAATATAGTTA+TGG | - | chr4_2:11757652-11757671 | None:intergenic | 20.0% |
| !! | AATTGCCTTTACAAATATTA+TGG | + | chr4_2:11758288-11758307 | Msa0589160:three_prime_UTR | 20.0% |
| !!! | TCTAATTATTCTGGAACAAA+GGG | - | chr4_2:11754099-11754118 | None:intergenic | 25.0% |
| ! | CACTATTCACATAATATACT+TGG | - | chr4_2:11754267-11754286 | None:intergenic | 25.0% |
| !!! | TGATTTTTGAAATGCAATCT+TGG | + | chr4_2:11754374-11754393 | Msa0589160:intron | 25.0% |
| !! | TTTTTATGTTTCAGTGAGTT+TGG | + | chr4_2:11754398-11754417 | Msa0589160:intron | 25.0% |
| !! | TTTTATGTTTCAGTGAGTTT+GGG | + | chr4_2:11754399-11754418 | Msa0589160:intron | 25.0% |
| !!! | CAACACAATTTTAGAAAACA+TGG | - | chr4_2:11754494-11754513 | None:intergenic | 25.0% |
| ! | ATAGTTATATGTTCTTGACA+TGG | + | chr4_2:11754527-11754546 | Msa0589160:intron | 25.0% |
| ! | TAGTTATATGTTCTTGACAT+GGG | + | chr4_2:11754528-11754547 | Msa0589160:intron | 25.0% |
| !! | TTCTTATTTGACCTCATATA+TGG | + | chr4_2:11754733-11754752 | Msa0589160:intron | 25.0% |
| ! | AATATAATTCAGATGAAGTG+TGG | - | chr4_2:11755056-11755075 | None:intergenic | 25.0% |
| ! | ATTGAGCATATGAATTCAAA+TGG | - | chr4_2:11755100-11755119 | None:intergenic | 25.0% |
| ! | TTTGAATTCATATGCTCAAT+TGG | + | chr4_2:11755100-11755119 | Msa0589160:intron | 25.0% |
| ! | TTAGAAATTTAACAACACTG+GGG | - | chr4_2:11755345-11755364 | None:intergenic | 25.0% |
| ! | CTTAGAAATTTAACAACACT+GGG | - | chr4_2:11755346-11755365 | None:intergenic | 25.0% |
| ! | ACTTAGAAATTTAACAACAC+TGG | - | chr4_2:11755347-11755366 | None:intergenic | 25.0% |
| !! | GTGTTGTTAAATTTCTAAGT+AGG | + | chr4_2:11755347-11755366 | Msa0589160:intron | 25.0% |
| !! | TAAATTTCTAAGTAGGCTTT+TGG | + | chr4_2:11755354-11755373 | Msa0589160:intron | 25.0% |
| !! | CGTAAGTTAAGATCTTTTTA+AGG | + | chr4_2:11755717-11755736 | Msa0589160:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr4_2:11755965-11755984 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr4_2:11755982-11756001 | Msa0589160:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr4_2:11756107-11756126 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | + | chr4_2:11756715-11756734 | Msa0589160:intron | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | + | chr4_2:11756716-11756735 | Msa0589160:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | - | chr4_2:11757152-11757171 | None:intergenic | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | - | chr4_2:11757153-11757172 | None:intergenic | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | + | chr4_2:11757154-11757173 | Msa0589160:intron | 25.0% |
| ! | ATCCTTCATTAAATAAGTTG+TGG | + | chr4_2:11757429-11757448 | Msa0589160:intron | 25.0% |
| !! | TGATTTTATCAAGTTTGATG+TGG | + | chr4_2:11757858-11757877 | Msa0589160:CDS | 25.0% |
| !! | GATTTTATCAAGTTTGATGT+GGG | + | chr4_2:11757859-11757878 | Msa0589160:CDS | 25.0% |
| !! | ATTTTATCAAGTTTGATGTG+GGG | + | chr4_2:11757860-11757879 | Msa0589160:CDS | 25.0% |
| !!! | AAATTGCATTTTTGTTGACT+GGG | + | chr4_2:11758155-11758174 | Msa0589160:three_prime_UTR | 25.0% |
| ! | TGTCACCATAATATTTGTAA+AGG | - | chr4_2:11758296-11758315 | None:intergenic | 25.0% |
| ACTCACACATGAAATTACAT+TGG | + | chr4_2:11753990-11754009 | Msa0589160:intron | 30.0% | |
| CACATGAAATTACATTGGAT+TGG | + | chr4_2:11753995-11754014 | Msa0589160:intron | 30.0% | |
| !! | GTCTAATTATTCTGGAACAA+AGG | - | chr4_2:11754100-11754119 | None:intergenic | 30.0% |
| GTGAAACAGTCTAATTATTC+TGG | - | chr4_2:11754108-11754127 | None:intergenic | 30.0% | |
| TAAATGTCAAAATTGCGCAT+GGG | - | chr4_2:11754136-11754155 | None:intergenic | 30.0% | |
| TTAAATGTCAAAATTGCGCA+TGG | - | chr4_2:11754137-11754156 | None:intergenic | 30.0% | |
| !!! | CAAGGTTTATTATTTTGGGA+TGG | + | chr4_2:11754299-11754318 | Msa0589160:intron | 30.0% |
| ! | CTAAAATCTCAAAGTATCCT+AGG | - | chr4_2:11754445-11754464 | None:intergenic | 30.0% |
| !!! | TGAGATTTTAGAACTTCAGA+AGG | + | chr4_2:11754454-11754473 | Msa0589160:intron | 30.0% |
| !!! | ATTTTAGAACTTCAGAAGGA+TGG | + | chr4_2:11754458-11754477 | Msa0589160:intron | 30.0% |
| AAGAATACAAGCCATATATG+AGG | - | chr4_2:11754747-11754766 | None:intergenic | 30.0% | |
| !! | ATTGGCTTTCTGTAATTGTT+AGG | + | chr4_2:11754876-11754895 | Msa0589160:intron | 30.0% |
| TCTAATATATTTCAGGCAAG+AGG | + | chr4_2:11754947-11754966 | Msa0589160:intron | 30.0% | |
| CTAATATATTTCAGGCAAGA+GGG | + | chr4_2:11754948-11754967 | Msa0589160:intron | 30.0% | |
| TGGAACATACAAATAAACAC+AGG | - | chr4_2:11755080-11755099 | None:intergenic | 30.0% | |
| ATTCATATGCTCAATTGGTT+TGG | + | chr4_2:11755105-11755124 | Msa0589160:intron | 30.0% | |
| TAGAAATTTAACAACACTGG+GGG | - | chr4_2:11755344-11755363 | None:intergenic | 30.0% | |
| TTAGGAATAGAAACAACATC+TGG | - | chr4_2:11755426-11755445 | None:intergenic | 30.0% | |
| !! | CGGAAGTTTTCATTTGTTTT+AGG | - | chr4_2:11755444-11755463 | None:intergenic | 30.0% |
| TGAAATTAGAGAGATAGTGA+AGG | - | chr4_2:11755539-11755558 | None:intergenic | 30.0% | |
| ACGATATGCATTGTTAAACA+GGG | - | chr4_2:11755637-11755656 | None:intergenic | 30.0% | |
| TCTTTGATAGAACATTATGG+TGG | - | chr4_2:11755918-11755937 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr4_2:11755921-11755940 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr4_2:11755925-11755944 | Msa0589160:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr4_2:11755960-11755979 | Msa0589160:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr4_2:11756111-11756130 | Msa0589160:intron | 30.0% |
| TTACACGGTTTAGATATCTT+GGG | - | chr4_2:11756443-11756462 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | + | chr4_2:11756446-11756465 | Msa0589160:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | - | chr4_2:11756518-11756537 | None:intergenic | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | - | chr4_2:11756538-11756557 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | - | chr4_2:11756697-11756716 | None:intergenic | 30.0% |
| TATTGTTATGGGAAAATCTC+CGG | + | chr4_2:11756758-11756777 | Msa0589160:intron | 30.0% | |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | - | chr4_2:11756916-11756935 | None:intergenic | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | - | chr4_2:11756922-11756941 | None:intergenic | 30.0% |
| TTCCAATCTATAAGAACAAG+GGG | - | chr4_2:11757151-11757170 | None:intergenic | 30.0% | |
| ! | AACTTTTCAACGAGATTATG+AGG | - | chr4_2:11757214-11757233 | None:intergenic | 30.0% |
| GAAACTATAACTATTATCGC+CGG | - | chr4_2:11757361-11757380 | None:intergenic | 30.0% | |
| GGCGATAATAGTTATAGTTT+CGG | + | chr4_2:11757360-11757379 | Msa0589160:intron | 30.0% | |
| GTCCACAACTTATTTAATGA+AGG | - | chr4_2:11757434-11757453 | None:intergenic | 30.0% | |
| TGTCAGTATTTGTACTTCAT+AGG | + | chr4_2:11757518-11757537 | Msa0589160:intron | 30.0% | |
| GTCAGTATTTGTACTTCATA+GGG | + | chr4_2:11757519-11757538 | Msa0589160:intron | 30.0% | |
| AAAGTTCGATCTGTTCAATT+CGG | + | chr4_2:11757721-11757740 | Msa0589160:CDS | 30.0% | |
| AAGAACAGAGAGAAACATAA+GGG | + | chr4_2:11757934-11757953 | Msa0589160:CDS | 30.0% | |
| AATGTGTTTACTATTGGCAA+GGG | + | chr4_2:11758018-11758037 | Msa0589160:CDS | 30.0% | |
| ! | CAAATTGCATTTTTGTTGAC+TGG | + | chr4_2:11758154-11758173 | Msa0589160:three_prime_UTR | 30.0% |
| ! | CTTAACCATAGTTTGTACAA+CGG | - | chr4_2:11758387-11758406 | None:intergenic | 30.0% |
| ! | GGAATTGAAAGCATGTTATT+AGG | + | chr4_2:11758406-11758425 | Msa0589160:three_prime_UTR | 30.0% |
| CTGAGAAATTGAAGAGCAAA+AGG | - | chr4_2:11753646-11753665 | None:intergenic | 35.0% | |
| ATGGAACTGAATAGTGTTGT+TGG | + | chr4_2:11753823-11753842 | Msa0589160:intron | 35.0% | |
| ! | AACTGAATAGTGTTGTTGGA+AGG | + | chr4_2:11753827-11753846 | Msa0589160:intron | 35.0% |
| ACAAAGGGAGTAGTAGTATA+AGG | - | chr4_2:11754084-11754103 | None:intergenic | 35.0% | |
| GTCGAGATGAATATTTCGAA+TGG | - | chr4_2:11754179-11754198 | None:intergenic | 35.0% | |
| ATAGTGCACATTGTCAAACA+AGG | + | chr4_2:11754281-11754300 | Msa0589160:intron | 35.0% | |
| ! | TGGCTTGTATTCTTTAGCTT+TGG | + | chr4_2:11754753-11754772 | Msa0589160:intron | 35.0% |
| ! | TTGTCAAGCATCCAATGTTT+TGG | - | chr4_2:11755004-11755023 | None:intergenic | 35.0% |
| TGTGGAAAATGGTCATACAA+AGG | - | chr4_2:11755038-11755057 | None:intergenic | 35.0% | |
| TTCAGATGAAGTGTGGAAAA+TGG | - | chr4_2:11755049-11755068 | None:intergenic | 35.0% | |
| GACGATATGCATTGTTAAAC+AGG | - | chr4_2:11755638-11755657 | None:intergenic | 35.0% | |
| ACAAGTCATTCGTCTATAGT+CGG | - | chr4_2:11755694-11755713 | None:intergenic | 35.0% | |
| ! | AAGTCTTGGATCTAAAGTGT+CGG | - | chr4_2:11755758-11755777 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr4_2:11755941-11755960 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr4_2:11755953-11755972 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+CGG | - | chr4_2:11756037-11756056 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr4_2:11756040-11756059 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr4_2:11756041-11756060 | Msa0589160:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr4_2:11756093-11756112 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr4_2:11756098-11756117 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr4_2:11756118-11756137 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr4_2:11756170-11756189 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr4_2:11756305-11756324 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr4_2:11756309-11756328 | Msa0589160:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr4_2:11756318-11756337 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | - | chr4_2:11756383-11756402 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+CGG | + | chr4_2:11756416-11756435 | Msa0589160:intron | 35.0% |
| GTTACACGGTTTAGATATCT+TGG | - | chr4_2:11756444-11756463 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | + | chr4_2:11756445-11756464 | Msa0589160:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | + | chr4_2:11756447-11756466 | Msa0589160:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr4_2:11756458-11756477 | None:intergenic | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | - | chr4_2:11756509-11756528 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | - | chr4_2:11756510-11756529 | None:intergenic | 35.0% | |
| ! | TCTGCAAAAAGCATACATCT+CGG | + | chr4_2:11756651-11756670 | Msa0589160:intron | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | - | chr4_2:11756759-11756778 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | + | chr4_2:11756827-11756846 | Msa0589160:intron | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | - | chr4_2:11757016-11757035 | None:intergenic | 35.0% |
| !!! | AACCAATTTGGTTTTATGCC+TGG | - | chr4_2:11757017-11757036 | None:intergenic | 35.0% |
| AAGAAAAGAGACTCACGTTA+CGG | - | chr4_2:11757042-11757061 | None:intergenic | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | - | chr4_2:11757081-11757100 | None:intergenic | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | - | chr4_2:11757082-11757101 | None:intergenic | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | - | chr4_2:11757087-11757106 | None:intergenic | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | - | chr4_2:11757088-11757107 | None:intergenic | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | - | chr4_2:11757123-11757142 | None:intergenic | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | - | chr4_2:11757124-11757143 | None:intergenic | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | - | chr4_2:11757150-11757169 | None:intergenic | 35.0% | |
| ATTGAAGTGTGGAAAAGTCT+TGG | - | chr4_2:11757263-11757282 | None:intergenic | 35.0% | |
| ! | AGACTTTTCCACACTTCAAT+AGG | + | chr4_2:11757263-11757282 | Msa0589160:intron | 35.0% |
| ACAACATACCTATTGAAGTG+TGG | - | chr4_2:11757274-11757293 | None:intergenic | 35.0% | |
| ACTTCAATAGGTATGTTGTC+CGG | + | chr4_2:11757275-11757294 | Msa0589160:intron | 35.0% | |
| ! | TAATTAGTGGATCTGGATAG+CGG | - | chr4_2:11757792-11757811 | None:intergenic | 35.0% |
| CTATCCAGATCCACTAATTA+AGG | + | chr4_2:11757792-11757811 | Msa0589160:CDS | 35.0% | |
| !!! | CAGTGATCTTGTTGTTTTCA+AGG | - | chr4_2:11757840-11757859 | None:intergenic | 35.0% |
| CAAGAACAGAGAGAAACATA+AGG | + | chr4_2:11757933-11757952 | Msa0589160:CDS | 35.0% | |
| !!! | TTTTGAGACTATCCATGTTC+AGG | + | chr4_2:11757960-11757979 | Msa0589160:CDS | 35.0% |
| TTGGGCAATGTGTTTACTAT+TGG | + | chr4_2:11758012-11758031 | Msa0589160:CDS | 35.0% | |
| CAATGTGTTTACTATTGGCA+AGG | + | chr4_2:11758017-11758036 | Msa0589160:CDS | 35.0% | |
| ! | CAAGTTGACTGTTATTGAAG+AGG | + | chr4_2:11758080-11758099 | Msa0589160:CDS | 35.0% |
| TTATTGAAGAGGCTAGAAAG+AGG | + | chr4_2:11758091-11758110 | Msa0589160:CDS | 35.0% | |
| !!! | TGACTGGGAGGTTTTTTTTT+TGG | + | chr4_2:11758170-11758189 | Msa0589160:three_prime_UTR | 35.0% |
| TTGATCCGTTGTACAAACTA+TGG | + | chr4_2:11758379-11758398 | Msa0589160:three_prime_UTR | 35.0% | |
| CGTTGTACAAACTATGGTTA+AGG | + | chr4_2:11758385-11758404 | Msa0589160:three_prime_UTR | 35.0% | |
| CAAAAGGTAACGAACCATGT+TGG | - | chr4_2:11753630-11753649 | None:intergenic | 40.0% | |
| GTAGCTGCATTGTGCTTATT+AGG | + | chr4_2:11753686-11753705 | Msa0589160:intron | 40.0% | |
| ! | TCCTGCATGTTTTCAACTGT+TGG | + | chr4_2:11753856-11753875 | Msa0589160:intron | 40.0% |
| ACCAACAGTTGAAAACATGC+AGG | - | chr4_2:11753860-11753879 | None:intergenic | 40.0% | |
| ACATCTTCAATCAGAAGGGT+AGG | - | chr4_2:11753910-11753929 | None:intergenic | 40.0% | |
| GGACACATCTTCAATCAGAA+GGG | - | chr4_2:11753914-11753933 | None:intergenic | 40.0% | |
| CTTCTGATTGAAGATGTGTC+CGG | + | chr4_2:11753913-11753932 | Msa0589160:intron | 40.0% | |
| CAGACACTAACAATGACACA+TGG | - | chr4_2:11753959-11753978 | None:intergenic | 40.0% | |
| ! | TTTGGGATGGAGAGAGTATA+TGG | + | chr4_2:11754312-11754331 | Msa0589160:intron | 40.0% |
| ! | TTGGGATGGAGAGAGTATAT+GGG | + | chr4_2:11754313-11754332 | Msa0589160:intron | 40.0% |
| AGTATATGGGGTTGACTACA+TGG | + | chr4_2:11754326-11754345 | Msa0589160:intron | 40.0% | |
| TCAGTGAGTTTGGGTATGTT+TGG | + | chr4_2:11754408-11754427 | Msa0589160:intron | 40.0% | |
| GTTTGGAAGTCTCAATACCT+AGG | + | chr4_2:11754425-11754444 | Msa0589160:intron | 40.0% | |
| GAGCTCATCTTTATGTCCTA+GGG | + | chr4_2:11754609-11754628 | Msa0589160:intron | 40.0% | |
| TCATCTTTATGTCCTAGGGA+TGG | + | chr4_2:11754613-11754632 | Msa0589160:intron | 40.0% | |
| CATCTTTATGTCCTAGGGAT+GGG | + | chr4_2:11754614-11754633 | Msa0589160:intron | 40.0% | |
| ATCTTTATGTCCTAGGGATG+GGG | + | chr4_2:11754615-11754634 | Msa0589160:intron | 40.0% | |
| GACTCAATGCTCCAAAACAT+TGG | + | chr4_2:11754990-11755009 | Msa0589160:CDS | 40.0% | |
| CATTGGATGCTTGACAAACT+TGG | + | chr4_2:11755007-11755026 | Msa0589160:CDS | 40.0% | |
| CATATTTCAGTCTGTTTCGC+AGG | - | chr4_2:11755198-11755217 | None:intergenic | 40.0% | |
| !! | TCATGTTCTTGTTGATGGCA+AGG | + | chr4_2:11755258-11755277 | Msa0589160:CDS | 40.0% |
| !! | TTCTTGTTGATGGCAAGGTT+AGG | + | chr4_2:11755263-11755282 | Msa0589160:CDS | 40.0% |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr4_2:11756012-11756031 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr4_2:11756143-11756162 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr4_2:11756144-11756163 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr4_2:11756145-11756164 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr4_2:11756176-11756195 | None:intergenic | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr4_2:11756384-11756403 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr4_2:11756479-11756498 | Msa0589160:intron | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr4_2:11756486-11756505 | None:intergenic | 40.0% | |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | + | chr4_2:11756541-11756560 | Msa0589160:intron | 40.0% |
| TAACAATAGGACTGCACCAA+GGG | - | chr4_2:11756746-11756765 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | - | chr4_2:11756747-11756766 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | + | chr4_2:11756746-11756765 | Msa0589160:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | + | chr4_2:11756747-11756766 | Msa0589160:intron | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | - | chr4_2:11756817-11756836 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | - | chr4_2:11756818-11756837 | None:intergenic | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | - | chr4_2:11756819-11756838 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | - | chr4_2:11756820-11756839 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | - | chr4_2:11756832-11756851 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | + | chr4_2:11756876-11756895 | Msa0589160:intron | 40.0% | |
| ! | GAGTACCTAGAGAGATTTTG+TGG | - | chr4_2:11756884-11756903 | None:intergenic | 40.0% |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | - | chr4_2:11757013-11757032 | None:intergenic | 40.0% |
| TCCCAGGCATAAAACCAAAT+TGG | + | chr4_2:11757012-11757031 | Msa0589160:intron | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | - | chr4_2:11757029-11757048 | None:intergenic | 40.0% | |
| TACCCTTTCCCATAACTTCA+TGG | + | chr4_2:11757076-11757095 | Msa0589160:intron | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | - | chr4_2:11757122-11757141 | None:intergenic | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | + | chr4_2:11757146-11757165 | Msa0589160:intron | 40.0% | |
| TATGAGGACGAAGAAAATGC+CGG | - | chr4_2:11757198-11757217 | None:intergenic | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | - | chr4_2:11757309-11757328 | None:intergenic | 40.0% | |
| GCGTTGAAAAGGATGAGTAA+TGG | - | chr4_2:11757314-11757333 | None:intergenic | 40.0% | |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | - | chr4_2:11757325-11757344 | None:intergenic | 40.0% |
| TAACTATTATCGCCGGATTC+AGG | - | chr4_2:11757354-11757373 | None:intergenic | 40.0% | |
| TAACAGGTTAGACATCAGAG+AGG | - | chr4_2:11757390-11757409 | None:intergenic | 40.0% | |
| ATGTCTAACCTGTTAGAGTC+TGG | + | chr4_2:11757395-11757414 | Msa0589160:intron | 40.0% | |
| AGATCTTACCAGACTCTAAC+AGG | - | chr4_2:11757406-11757425 | None:intergenic | 40.0% | |
| TCATAGGGTACAAGTCTTCA+AGG | + | chr4_2:11757534-11757553 | Msa0589160:intron | 40.0% | |
| CATAGGGTACAAGTCTTCAA+GGG | + | chr4_2:11757535-11757554 | Msa0589160:intron | 40.0% | |
| AATGTCAGACAGATGCATAC+AGG | + | chr4_2:11757578-11757597 | Msa0589160:intron | 40.0% | |
| ATCTGTTCAATTCGGACAGA+AGG | + | chr4_2:11757729-11757748 | Msa0589160:CDS | 40.0% | |
| TCTGTTCAATTCGGACAGAA+GGG | + | chr4_2:11757730-11757749 | Msa0589160:CDS | 40.0% | |
| CCATCATAGGTGTTCAGATA+GGG | - | chr4_2:11757760-11757779 | None:intergenic | 40.0% | |
| ACCATCATAGGTGTTCAGAT+AGG | - | chr4_2:11757761-11757780 | None:intergenic | 40.0% | |
| !! | TTGGCCTTAATTAGTGGATC+TGG | - | chr4_2:11757799-11757818 | None:intergenic | 40.0% |
| !! | GTGTCATTGGCCTTAATTAG+TGG | - | chr4_2:11757805-11757824 | None:intergenic | 40.0% |
| !! | GTTTTCAAGGTCAAGCTTGA+TGG | - | chr4_2:11757827-11757846 | None:intergenic | 40.0% |
| ! | AACTTGATGCCTTTTCCCTT+GGG | - | chr4_2:11758066-11758085 | None:intergenic | 40.0% |
| !! | TTGCATTTTTGTTGACTGGG+AGG | + | chr4_2:11758158-11758177 | Msa0589160:three_prime_UTR | 40.0% |
| CCATGTTAAACATCACGCAA+CGG | - | chr4_2:11758357-11758376 | None:intergenic | 40.0% | |
| TTCAGCACAAGACTCCAACA+TGG | + | chr4_2:11753613-11753632 | Msa0589160:exon | 45.0% | |
| CTTCAATCAGAAGGGTAGGA+GGG | - | chr4_2:11753906-11753925 | None:intergenic | 45.0% | |
| TCTTCAATCAGAAGGGTAGG+AGG | - | chr4_2:11753907-11753926 | None:intergenic | 45.0% | |
| CGGACACATCTTCAATCAGA+AGG | - | chr4_2:11753915-11753934 | None:intergenic | 45.0% | |
| CGCTAACATGTGTTAGACAC+CGG | - | chr4_2:11753935-11753954 | None:intergenic | 45.0% | |
| ! | TGGGATGGAGAGAGTATATG+GGG | + | chr4_2:11754314-11754333 | Msa0589160:intron | 45.0% |
| CGAGCTCATCTTTATGTCCT+AGG | + | chr4_2:11754608-11754627 | Msa0589160:intron | 45.0% | |
| ACTAACATATCCCCATCCCT+AGG | - | chr4_2:11754628-11754647 | None:intergenic | 45.0% | |
| TGGATGCTTGACAAACTTGG+TGG | + | chr4_2:11755010-11755029 | Msa0589160:CDS | 45.0% | |
| !! | CTCAATTGGTTTGGATGTGC+AGG | + | chr4_2:11755114-11755133 | Msa0589160:intron | 45.0% |
| TTTCGCAGGATGAGGATCAA+AGG | - | chr4_2:11755184-11755203 | None:intergenic | 45.0% | |
| AACATGACGCTGCATCAAGA+TGG | - | chr4_2:11755245-11755264 | None:intergenic | 45.0% | |
| CAGCGTCATGTTCTTGTTGA+TGG | + | chr4_2:11755253-11755272 | Msa0589160:CDS | 45.0% | |
| !! | ACATATCCCGCTGGTTTCAT+GGG | + | chr4_2:11755295-11755314 | Msa0589160:CDS | 45.0% |
| !! | CCTTGGTGTCATACAGAAGA+CGG | - | chr4_2:11755464-11755483 | None:intergenic | 45.0% |
| CGTCTTCTGTATGACACCAA+GGG | + | chr4_2:11755462-11755481 | Msa0589160:CDS | 45.0% | |
| TTCTGTATGACACCAAGGGT+CGG | + | chr4_2:11755466-11755485 | Msa0589160:CDS | 45.0% | |
| ACTCACTCACACACTGCTTA+AGG | + | chr4_2:11755658-11755677 | Msa0589160:intron | 45.0% | |
| CTCACTCACACACTGCTTAA+GGG | + | chr4_2:11755659-11755678 | Msa0589160:intron | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | + | chr4_2:11755871-11755890 | Msa0589160:intron | 45.0% | |
| GGTTTGGACATGTAGAGAGA+AGG | - | chr4_2:11756077-11756096 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr4_2:11756142-11756161 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr4_2:11756223-11756242 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr4_2:11756226-11756245 | Msa0589160:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr4_2:11756262-11756281 | None:intergenic | 45.0% |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr4_2:11756263-11756282 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr4_2:11756267-11756286 | Msa0589160:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr4_2:11756271-11756290 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr4_2:11756338-11756357 | Msa0589160:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr4_2:11756357-11756376 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr4_2:11756371-11756390 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr4_2:11756380-11756399 | None:intergenic | 45.0% | |
| GGGTCCGTAGTACAAAATGA+CGG | - | chr4_2:11756423-11756442 | None:intergenic | 45.0% | |
| ! | GCAGATGATGTAGTCTTGCT+TGG | - | chr4_2:11756636-11756655 | None:intergenic | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | + | chr4_2:11756664-11756683 | Msa0589160:intron | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | - | chr4_2:11756874-11756893 | None:intergenic | 45.0% |
| GTCTTGGCGATAGAGGAATT+GGG | - | chr4_2:11757247-11757266 | None:intergenic | 45.0% | |
| AGTCTTGGCGATAGAGGAAT+TGG | - | chr4_2:11757248-11757267 | None:intergenic | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | - | chr4_2:11757254-11757273 | None:intergenic | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | - | chr4_2:11757301-11757320 | None:intergenic | 45.0% | |
| ATGAGTAATGGCAAGGCAGT+TGG | - | chr4_2:11757302-11757321 | None:intergenic | 45.0% | |
| ATACTGACACAGACACGACA+TGG | - | chr4_2:11757507-11757526 | None:intergenic | 45.0% | |
| CCCTATCTGAACACCTATGA+TGG | + | chr4_2:11757757-11757776 | Msa0589160:CDS | 45.0% | |
| !! | GTCAAGCTTGATGGTGTCAT+TGG | - | chr4_2:11757818-11757837 | None:intergenic | 45.0% |
| TGATGTGGGGAATGTTGTCA+TGG | + | chr4_2:11757873-11757892 | Msa0589160:CDS | 45.0% | |
| GGGAATGTTGTCATGGTTAC+CGG | + | chr4_2:11757880-11757899 | Msa0589160:CDS | 45.0% | |
| AATGTTGTCATGGTTACCGG+AGG | + | chr4_2:11757883-11757902 | Msa0589160:CDS | 45.0% | |
| ATCCATGTTCAGGATGCAAG+TGG | + | chr4_2:11757970-11757989 | Msa0589160:CDS | 45.0% | |
| GTATCTCTTCCCAAGGGAAA+AGG | + | chr4_2:11758054-11758073 | Msa0589160:CDS | 45.0% | |
| ! | CAACTTGATGCCTTTTCCCT+TGG | - | chr4_2:11758067-11758086 | None:intergenic | 45.0% |
| CCGTTGCGTGATGTTTAACA+TGG | + | chr4_2:11758354-11758373 | Msa0589160:three_prime_UTR | 45.0% | |
| !! | AGTAAAAAAAAAAAAAAATA+TGG | + | chr4_2:11754240-11754259 | Msa0589160:intron | 5.0% |
| ! | GCCGTCTTTTTGTGTCGTGT+CGG | + | chr4_2:11754023-11754042 | Msa0589160:intron | 50.0% |
| CCCGACACGACACAAAAAGA+CGG | - | chr4_2:11754027-11754046 | None:intergenic | 50.0% | |
| ! | CCGTCTTTTTGTGTCGTGTC+GGG | + | chr4_2:11754024-11754043 | Msa0589160:intron | 50.0% |
| ATCTGGACCCCACAAGTCAA+GGG | + | chr4_2:11755150-11755169 | Msa0589160:CDS | 50.0% | |
| !! | AAGGCACTCCCTTGACTTGT+GGG | - | chr4_2:11755161-11755180 | None:intergenic | 50.0% |
| GCAGGATGAGGATCAAAGGA+AGG | - | chr4_2:11755180-11755199 | None:intergenic | 50.0% | |
| TCAGTCTGTTTCGCAGGATG+AGG | - | chr4_2:11755192-11755211 | None:intergenic | 50.0% | |
| ACAGACAAGACATATCCCGC+TGG | + | chr4_2:11755286-11755305 | Msa0589160:CDS | 50.0% | |
| !! | GACATATCCCGCTGGTTTCA+TGG | + | chr4_2:11755294-11755313 | Msa0589160:CDS | 50.0% |
| CACATACCCATGAAACCAGC+GGG | - | chr4_2:11755304-11755323 | None:intergenic | 50.0% | |
| GCACATACCCATGAAACCAG+CGG | - | chr4_2:11755305-11755324 | None:intergenic | 50.0% | |
| CCGTCTTCTGTATGACACCA+AGG | + | chr4_2:11755461-11755480 | Msa0589160:CDS | 50.0% | |
| TGTCAGGGATGATGAGGCAA+AGG | + | chr4_2:11755503-11755522 | Msa0589160:CDS | 50.0% | |
| TCACGTGTCTGGACAAGTCT+TGG | - | chr4_2:11755772-11755791 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | + | chr4_2:11755870-11755889 | Msa0589160:intron | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | + | chr4_2:11755872-11755891 | Msa0589160:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4_2:11755876-11755895 | Msa0589160:intron | 50.0% | |
| GCGGAGAGTCAGGTTAAAAG+AGG | - | chr4_2:11756018-11756037 | None:intergenic | 50.0% | |
| ! | AGATCAAATGGCGGAGAGTC+AGG | - | chr4_2:11756028-11756047 | None:intergenic | 50.0% |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr4_2:11756050-11756069 | Msa0589160:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr4_2:11756195-11756214 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr4_2:11756215-11756234 | None:intergenic | 50.0% |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr4_2:11756276-11756295 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr4_2:11756496-11756515 | None:intergenic | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | - | chr4_2:11756547-11756566 | None:intergenic | 50.0% | |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | + | chr4_2:11756544-11756563 | Msa0589160:intron | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | - | chr4_2:11756573-11756592 | None:intergenic | 50.0% |
| TAAACGGGAGGCTAGAGACT+TGG | - | chr4_2:11756596-11756615 | None:intergenic | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | - | chr4_2:11756611-11756630 | None:intergenic | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | - | chr4_2:11756612-11756631 | None:intergenic | 50.0% | |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | - | chr4_2:11756625-11756644 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | - | chr4_2:11756626-11756645 | None:intergenic | 50.0% |
| AAGGACTTAGGGTTGACCCT+TGG | + | chr4_2:11756727-11756746 | Msa0589160:intron | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | + | chr4_2:11756811-11756830 | Msa0589160:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | - | chr4_2:11756862-11756881 | None:intergenic | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | - | chr4_2:11756863-11756882 | None:intergenic | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | - | chr4_2:11756864-11756883 | None:intergenic | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | - | chr4_2:11756973-11756992 | None:intergenic | 50.0% | |
| TTGGCGATAGAGGAATTGGG+TGG | - | chr4_2:11757244-11757263 | None:intergenic | 50.0% | |
| CAGGTTAGACATCAGAGAGG+AGG | - | chr4_2:11757387-11757406 | None:intergenic | 50.0% | |
| !! | TAGTGGATCTGGATAGCGGA+TGG | - | chr4_2:11757788-11757807 | None:intergenic | 50.0% |
| TTGTCATGGTTACCGGAGGA+AGG | + | chr4_2:11757887-11757906 | Msa0589160:CDS | 50.0% | |
| GTTACCGGAGGAAGGAATAG+AGG | + | chr4_2:11757895-11757914 | Msa0589160:CDS | 50.0% | |
| ACGACCTCTATTCCTTCCTC+CGG | - | chr4_2:11757902-11757921 | None:intergenic | 50.0% | |
| GGAAGGAATAGAGGTCGTGT+TGG | + | chr4_2:11757904-11757923 | Msa0589160:CDS | 50.0% | |
| GACCACTTGCATCCTGAACA+TGG | - | chr4_2:11757975-11757994 | None:intergenic | 50.0% | |
| GTGGTCATGAGTTTGCCACT+CGG | + | chr4_2:11757989-11758008 | Msa0589160:CDS | 50.0% | |
| TCATGAGTTTGCCACTCGGT+TGG | + | chr4_2:11757993-11758012 | Msa0589160:CDS | 50.0% | |
| CATGAGTTTGCCACTCGGTT+GGG | + | chr4_2:11757994-11758013 | Msa0589160:CDS | 50.0% | |
| AAACACATTGCCCAACCGAG+TGG | - | chr4_2:11758007-11758026 | None:intergenic | 50.0% | |
| TTGGCAAGGGAACAAAGCCT+TGG | + | chr4_2:11758031-11758050 | Msa0589160:CDS | 50.0% | |
| TGGCAAGGGAACAAAGCCTT+GGG | + | chr4_2:11758032-11758051 | Msa0589160:CDS | 50.0% | |
| CCTTGGGTATCTCTTCCCAA+GGG | + | chr4_2:11758048-11758067 | Msa0589160:CDS | 50.0% | |
| TGAAGAGGCTAGAAAGAGGC+AGG | + | chr4_2:11758095-11758114 | Msa0589160:CDS | 50.0% | |
| TCAGAGATGAGTTCCGCCGT+GGG | - | chr4_2:11753588-11753607 | None:intergenic | 55.0% | |
| ATCAGAGATGAGTTCCGCCG+TGG | - | chr4_2:11753589-11753608 | None:intergenic | 55.0% | |
| CAGGCACCAAAGCCATCATC+TGG | + | chr4_2:11755133-11755152 | Msa0589160:intron | 55.0% | |
| ! | TGGGGTCCAGATGATGGCTT+TGG | - | chr4_2:11755142-11755161 | None:intergenic | 55.0% |
| GACTTGTGGGGTCCAGATGA+TGG | - | chr4_2:11755148-11755167 | None:intergenic | 55.0% | |
| CATCTGGACCCCACAAGTCA+AGG | + | chr4_2:11755149-11755168 | Msa0589160:CDS | 55.0% | |
| !! | AGGCACTCCCTTGACTTGTG+GGG | - | chr4_2:11755160-11755179 | None:intergenic | 55.0% |
| !! | GAAGGCACTCCCTTGACTTG+TGG | - | chr4_2:11755162-11755181 | None:intergenic | 55.0% |
| GTTCCGTCTCCACTCTGTCA+GGG | + | chr4_2:11755488-11755507 | Msa0589160:CDS | 55.0% | |
| CATCCCTGACAGAGTGGAGA+CGG | - | chr4_2:11755494-11755513 | None:intergenic | 55.0% | |
| CCTCATCATCCCTGACAGAG+TGG | - | chr4_2:11755500-11755519 | None:intergenic | 55.0% | |
| CCACTCTGTCAGGGATGATG+AGG | + | chr4_2:11755497-11755516 | Msa0589160:CDS | 55.0% | |
| ACAGACGCATGTCACGTGTC+TGG | - | chr4_2:11755783-11755802 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4_2:11755878-11755897 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4_2:11755884-11755903 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4_2:11755885-11755904 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4_2:11755884-11755903 | Msa0589160:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr4_2:11756051-11756070 | Msa0589160:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr4_2:11756203-11756222 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr4_2:11756289-11756308 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | + | chr4_2:11756563-11756582 | Msa0589160:intron | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | - | chr4_2:11756787-11756806 | None:intergenic | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | - | chr4_2:11756788-11756807 | None:intergenic | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | - | chr4_2:11756789-11756808 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | - | chr4_2:11756793-11756812 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | + | chr4_2:11756853-11756872 | Msa0589160:intron | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | + | chr4_2:11756854-11756873 | Msa0589160:intron | 55.0% | |
| ! | CGTGATGGAGCGATATCGGA+CGG | - | chr4_2:11756958-11756977 | None:intergenic | 55.0% |
| ! | GACGCGTGATGGAGCGATAT+CGG | - | chr4_2:11756962-11756981 | None:intergenic | 55.0% |
| TATGCCTGGGAGGTCGACTA+TGG | - | chr4_2:11757003-11757022 | None:intergenic | 55.0% | |
| GTGCTTCTTCTCCACTCGTC+CGG | + | chr4_2:11757176-11757195 | Msa0589160:intron | 55.0% | |
| CGAAGAAAATGCCGGACGAG+TGG | - | chr4_2:11757190-11757209 | None:intergenic | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | - | chr4_2:11757297-11757316 | None:intergenic | 55.0% | |
| TCACCTCGTGCTCCTGAATC+CGG | + | chr4_2:11757339-11757358 | Msa0589160:intron | 55.0% | |
| GCCTTGGGTATCTCTTCCCA+AGG | + | chr4_2:11758047-11758066 | Msa0589160:CDS | 55.0% | |
| CCCTTGGGAAGAGATACCCA+AGG | - | chr4_2:11758051-11758070 | None:intergenic | 55.0% | |
| AGATGAGTTCCGCCGTGGGT+GGG | - | chr4_2:11753584-11753603 | None:intergenic | 60.0% | |
| GGTTCCGTCTCCACTCTGTC+AGG | + | chr4_2:11755487-11755506 | Msa0589160:CDS | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | - | chr4_2:11756593-11756612 | None:intergenic | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | - | chr4_2:11756608-11756627 | None:intergenic | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | - | chr4_2:11756622-11756641 | None:intergenic | 60.0% |
| AGGACGCAGGATGGGGATAC+CGG | - | chr4_2:11756780-11756799 | None:intergenic | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | - | chr4_2:11756800-11756819 | None:intergenic | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | - | chr4_2:11756857-11756876 | None:intergenic | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | + | chr4_2:11756996-11757015 | Msa0589160:intron | 60.0% | |
| GCGGATGGTGCGACCATCAT+AGG | - | chr4_2:11757773-11757792 | None:intergenic | 60.0% | |
| TGAACCCACCCACCCACCCA+CGG | + | chr4_2:11753569-11753588 | Msa0589160:five_prime_UTR | 65.0% | |
| GAGATGAGTTCCGCCGTGGG+TGG | - | chr4_2:11753585-11753604 | None:intergenic | 65.0% | |
| GTGGAGACGGAACCGACCCT+TGG | - | chr4_2:11755481-11755500 | None:intergenic | 65.0% | |
| ! | TCGCCGGATTCAGGAGCACG+AGG | - | chr4_2:11757345-11757364 | None:intergenic | 65.0% |
| GAGTTCCGCCGTGGGTGGGT+GGG | - | chr4_2:11753580-11753599 | None:intergenic | 70.0% | |
| TGAGTTCCGCCGTGGGTGGG+TGG | - | chr4_2:11753581-11753600 | None:intergenic | 70.0% | |
| GAGAAGGCCCGTAGACGCCG+TGG | - | chr4_2:11756061-11756080 | None:intergenic | 70.0% | |
| ACCCACCCACCCACCCACGG+CGG | + | chr4_2:11753572-11753591 | Msa0589160:five_prime_UTR | 75.0% | |
| TCCGCCGTGGGTGGGTGGGT+GGG | - | chr4_2:11753576-11753595 | None:intergenic | 75.0% | |
| TTCCGCCGTGGGTGGGTGGG+TGG | - | chr4_2:11753577-11753596 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 11753563 | 11758429 | 11753563 | ID=Msa0589160;Name=Msa0589160 |
| chr4_2 | mRNA | 11753563 | 11758429 | 11753563 | ID=Msa0589160-mRNA-1;Parent=Msa0589160;Name=Msa0589160-mRNA-1;_AED=0.04;_eAED=0.04;_QI=69|1|1|1|0.75|1|5|286|264 |
| chr4_2 | exon | 11753563 | 11753634 | 11753563 | ID=Msa0589160-mRNA-1:exon:3433;Parent=Msa0589160-mRNA-1 |
| chr4_2 | exon | 11754962 | 11755039 | 11754962 | ID=Msa0589160-mRNA-1:exon:3434;Parent=Msa0589160-mRNA-1 |
| chr4_2 | exon | 11755136 | 11755316 | 11755136 | ID=Msa0589160-mRNA-1:exon:3435;Parent=Msa0589160-mRNA-1 |
| chr4_2 | exon | 11755427 | 11755524 | 11755427 | ID=Msa0589160-mRNA-1:exon:3436;Parent=Msa0589160-mRNA-1 |
| chr4_2 | exon | 11757709 | 11758429 | 11757709 | ID=Msa0589160-mRNA-1:exon:3437;Parent=Msa0589160-mRNA-1 |
| chr4_2 | five_prime_UTR | 11753563 | 11753631 | 11753563 | ID=Msa0589160-mRNA-1:five_prime_utr;Parent=Msa0589160-mRNA-1 |
| chr4_2 | CDS | 11753632 | 11753634 | 11753632 | ID=Msa0589160-mRNA-1:cds;Parent=Msa0589160-mRNA-1 |
| chr4_2 | CDS | 11754962 | 11755039 | 11754962 | ID=Msa0589160-mRNA-1:cds;Parent=Msa0589160-mRNA-1 |
| chr4_2 | CDS | 11755136 | 11755316 | 11755136 | ID=Msa0589160-mRNA-1:cds;Parent=Msa0589160-mRNA-1 |
| chr4_2 | CDS | 11755427 | 11755524 | 11755427 | ID=Msa0589160-mRNA-1:cds;Parent=Msa0589160-mRNA-1 |
| chr4_2 | CDS | 11757709 | 11758143 | 11757709 | ID=Msa0589160-mRNA-1:cds;Parent=Msa0589160-mRNA-1 |
| chr4_2 | three_prime_UTR | 11758144 | 11758429 | 11758144 | ID=Msa0589160-mRNA-1:three_prime_utr;Parent=Msa0589160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
