Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694400 | GAU50913.1 | 93.262 | 282 | 19 | 0 | 3 | 284 | 32 | 313 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694400 | sp|Q9LZH9|RL7A2_ARATH | 88.031 | 259 | 28 | 1 | 26 | 284 | 1 | 256 | 8.33e-169 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694400 | A0A2Z6P7X9 | 93.262 | 282 | 19 | 0 | 3 | 284 | 32 | 313 | 0.0 | 530 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0694400 | 0.893207 | 7.792747e-75 | -8.615850e-47 |
| Msa0003330 | Msa0694400 | 0.875421 | 3.123321e-68 | -8.615850e-47 |
| Msa0016350 | Msa0694400 | 0.837882 | 3.999184e-57 | -8.615850e-47 |
| Msa0027590 | Msa0694400 | 0.894893 | 1.605589e-75 | -8.615850e-47 |
| Msa0040220 | Msa0694400 | 0.872990 | 2.078978e-67 | -8.615850e-47 |
| Msa0042510 | Msa0694400 | 0.832908 | 7.227177e-56 | -8.615850e-47 |
| Msa0072570 | Msa0694400 | 0.819554 | 1.092853e-52 | -8.615850e-47 |
| Msa0075350 | Msa0694400 | 0.838932 | 2.143587e-57 | -8.615850e-47 |
| Msa0079560 | Msa0694400 | 0.838205 | 3.301929e-57 | -8.615850e-47 |
| Msa0086160 | Msa0694400 | 0.834074 | 3.698090e-56 | -8.615850e-47 |
| Msa0087910 | Msa0694400 | 0.895214 | 1.184836e-75 | -8.615850e-47 |
| Msa0114600 | Msa0694400 | 0.843041 | 1.787501e-58 | -8.615850e-47 |
| Msa0116600 | Msa0694400 | 0.835905 | 1.277823e-56 | -8.615850e-47 |
| Msa0116690 | Msa0694400 | 0.829389 | 5.290055e-55 | -8.615850e-47 |
| Msa0602900 | Msa0694400 | 0.913956 | 3.367356e-84 | -8.615850e-47 |
| Msa0605600 | Msa0694400 | 0.825582 | 4.332281e-54 | -8.615850e-47 |
| Msa0605890 | Msa0694400 | 0.892534 | 1.452417e-74 | -8.615850e-47 |
| Msa0609120 | Msa0694400 | 0.826753 | 2.281947e-54 | -8.615850e-47 |
| Msa0619230 | Msa0694400 | 0.911683 | 4.606005e-83 | -8.615850e-47 |
| Msa0621190 | Msa0694400 | 0.819025 | 1.442320e-52 | -8.615850e-47 |
| Msa0622230 | Msa0694400 | 0.816515 | 5.315438e-52 | -8.615850e-47 |
| Msa0629280 | Msa0694400 | 0.808408 | 3.142513e-50 | -8.615850e-47 |
| Msa0643960 | Msa0694400 | 0.911414 | 6.251351e-83 | -8.615850e-47 |
| Msa0649890 | Msa0694400 | 0.876009 | 1.962572e-68 | -8.615850e-47 |
| Msa0653060 | Msa0694400 | 0.831831 | 1.335548e-55 | -8.615850e-47 |
| Msa0656450 | Msa0694400 | 0.870540 | 1.350541e-66 | -8.615850e-47 |
| Msa0663400 | Msa0694400 | 0.834456 | 2.966673e-56 | -8.615850e-47 |
| Msa0667110 | Msa0694400 | 0.812003 | 5.273973e-51 | -8.615850e-47 |
| Msa0686550 | Msa0694400 | 0.843286 | 1.538600e-58 | -8.615850e-47 |
| Msa0691760 | Msa0694400 | 0.806515 | 7.925177e-50 | -8.615850e-47 |
| Msa0694400 | Msa0704860 | 0.881527 | 2.229703e-70 | -8.615850e-47 |
| Msa0694400 | Msa0705800 | 0.805292 | 1.432497e-49 | -8.615850e-47 |
| Msa0694400 | Msa0708630 | 0.910317 | 2.145517e-82 | -8.615850e-47 |
| Msa0694400 | Msa0718560 | 0.801571 | 8.454987e-49 | -8.615850e-47 |
| Msa0694400 | Msa0741510 | 0.872855 | 2.306712e-67 | -8.615850e-47 |
| Msa0694400 | Msa0748350 | 0.842650 | 2.272003e-58 | -8.615850e-47 |
| Msa0694400 | Msa0749000 | 0.820056 | 8.389206e-53 | -8.615850e-47 |
| Msa0694400 | Msa0758420 | 0.826561 | 2.535052e-54 | -8.615850e-47 |
| Msa0694400 | Msa0788380 | 0.847422 | 1.168297e-59 | -8.615850e-47 |
| Msa0694400 | Msa0790450 | 0.860185 | 2.463170e-63 | -8.615850e-47 |
| Msa0694400 | Msa0796490 | 0.832757 | 7.879771e-56 | -8.615850e-47 |
| Msa0694400 | Msa0798590 | 0.809867 | 1.530012e-50 | -8.615850e-47 |
| Msa0694400 | Msa0838070 | 0.827869 | 1.232852e-54 | -8.615850e-47 |
| Msa0694400 | Msa0902730 | 0.859733 | 3.371823e-63 | -8.615850e-47 |
| Msa0694400 | Msa0929680 | 0.862386 | 5.256516e-64 | -8.615850e-47 |
| Msa0694400 | Msa0929700 | 0.928426 | 2.935348e-92 | -8.615850e-47 |
| Msa0694400 | Msa0930100 | 0.858657 | 7.085290e-63 | -8.615850e-47 |
| Msa0694400 | Msa0930360 | 0.846645 | 1.907299e-59 | -8.615850e-47 |
| Msa0694400 | Msa0930790 | 0.872411 | 3.247587e-67 | -8.615850e-47 |
| Msa0694400 | Msa0930890 | 0.881527 | 2.229703e-70 | -8.615850e-47 |
| Msa0694400 | Msa0978470 | 0.830612 | 2.662708e-55 | -8.615850e-47 |
| Msa0694400 | Msa1037290 | 0.813656 | 2.292263e-51 | -8.615850e-47 |
| Msa0694400 | Msa1040160 | 0.859049 | 5.410350e-63 | -8.615850e-47 |
| Msa0694400 | Msa1041680 | 0.833910 | 4.064112e-56 | -8.615850e-47 |
| Msa0694400 | Msa1047020 | 0.818558 | 1.841518e-52 | -8.615850e-47 |
| Msa0694400 | Msa1050100 | 0.802872 | 4.564186e-49 | -8.615850e-47 |
| Msa0694400 | Msa1054280 | 0.828398 | 9.193506e-55 | -8.615850e-47 |
| Msa0694400 | Msa1068660 | 0.805779 | 1.132009e-49 | -8.615850e-47 |
| Msa0694400 | Msa1079910 | 0.853419 | 2.419200e-61 | -8.615850e-47 |
| Msa0694400 | Msa1080390 | 0.822077 | 2.873502e-53 | -8.615850e-47 |
| Msa0694400 | Msa1082050 | 0.840834 | 6.849805e-58 | -8.615850e-47 |
| Msa0694400 | Msa1082170 | 0.804071 | 2.575348e-49 | -8.615850e-47 |
| Msa0694400 | Msa1083370 | 0.869587 | 2.769031e-66 | -8.615850e-47 |
| Msa0694400 | Msa1085850 | 0.834335 | 3.181407e-56 | -8.615850e-47 |
| Msa0694400 | Msa1093500 | 0.860757 | 1.653295e-63 | -8.615850e-47 |
| Msa0694400 | Msa1116940 | 0.832282 | 1.033138e-55 | -8.615850e-47 |
| Msa0694400 | Msa1124850 | 0.847151 | 1.386318e-59 | -8.615850e-47 |
| Msa0694400 | Msa1125900 | 0.823311 | 1.483233e-53 | -8.615850e-47 |
| Msa0694400 | Msa1126100 | 0.817432 | 3.308479e-52 | -8.615850e-47 |
| Msa0694400 | Msa1126690 | 0.871834 | 5.052326e-67 | -8.615850e-47 |
| Msa0694400 | Msa1136880 | 0.801707 | 7.928907e-49 | -8.615850e-47 |
| Msa0694400 | Msa1164150 | 0.846025 | 2.813933e-59 | -8.615850e-47 |
| Msa0694400 | Msa1165640 | 0.819221 | 1.301220e-52 | -8.615850e-47 |
| Msa0694400 | Msa1166570 | 0.838253 | 3.209517e-57 | -8.615850e-47 |
| Msa0694400 | Msa1167540 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa0694400 | Msa1180000 | 0.903247 | 4.223647e-79 | -8.615850e-47 |
| Msa0694400 | Msa1186030 | 0.828807 | 7.321079e-55 | -8.615850e-47 |
| Msa0694400 | Msa1206240 | 0.824376 | 8.345895e-54 | -8.615850e-47 |
| Msa0694400 | Msa1208330 | 0.832976 | 6.951223e-56 | -8.615850e-47 |
| Msa0694400 | Msa1213850 | 0.805513 | 1.287156e-49 | -8.615850e-47 |
| Msa0694400 | Msa1219760 | 0.805282 | 1.439476e-49 | -8.615850e-47 |
| Msa0694400 | Msa1235950 | 0.899338 | 2.188111e-77 | -8.615850e-47 |
| Msa0694400 | Msa1235980 | 0.906713 | 1.105216e-80 | -8.615850e-47 |
| Msa0694400 | Msa1237040 | 0.896627 | 3.077734e-76 | -8.615850e-47 |
| Msa0694400 | Msa1240270 | 0.810529 | 1.101899e-50 | -8.615850e-47 |
| Msa0694400 | Msa1255830 | 0.838086 | 3.544371e-57 | -8.615850e-47 |
| Msa0694400 | Msa1255850 | 0.854380 | 1.279325e-61 | -8.615850e-47 |
| Msa0694400 | Msa1258540 | 0.881499 | 2.281669e-70 | -8.615850e-47 |
| Msa0694400 | Msa1270640 | 0.886296 | 3.868816e-72 | -8.615850e-47 |
| Msa0694400 | Msa1270710 | 0.884704 | 1.527120e-71 | -8.615850e-47 |
| Msa0694400 | Msa1278130 | 0.843751 | 1.155989e-58 | -8.615850e-47 |
| Msa0694400 | Msa1284060 | 0.859019 | 5.524298e-63 | -8.615850e-47 |
| Msa0694400 | Msa1284800 | 0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa0694400 | Msa1296090 | 0.859243 | 4.733444e-63 | -8.615850e-47 |
| Msa0694400 | Msa1311400 | 0.819937 | 8.935039e-53 | -8.615850e-47 |
| Msa0694400 | Msa1316100 | 0.864843 | 9.084230e-65 | -8.615850e-47 |
| Msa0694400 | Msa1317390 | 0.901707 | 2.040583e-78 | -8.615850e-47 |
| Msa0694400 | Msa1333350 | 0.809707 | 1.656134e-50 | -8.615850e-47 |
| Msa0694400 | Msa1333370 | 0.817781 | 2.760427e-52 | -8.615850e-47 |
| Msa0694400 | Msa1341780 | 0.861464 | 1.007698e-63 | -8.615850e-47 |
| Msa0694400 | Msa1344160 | 0.830341 | 3.101392e-55 | -8.615850e-47 |
| Msa0694400 | Msa1344190 | 0.829457 | 5.093335e-55 | -8.615850e-47 |
| Msa0694400 | Msa1351020 | 0.895539 | 8.703460e-76 | -8.615850e-47 |
| Msa0694400 | Msa1351910 | 0.855447 | 6.270346e-62 | -8.615850e-47 |
| Msa0694400 | Msa1353300 | 0.813165 | 2.939094e-51 | -8.615850e-47 |
| Msa0694400 | Msa1358710 | 0.866646 | 2.448383e-65 | -8.615850e-47 |
| Msa0694400 | Msa1367540 | 0.804173 | 2.452508e-49 | -8.615850e-47 |
| Msa0694400 | Msa1368920 | 0.815473 | 9.079395e-52 | -8.615850e-47 |
| Msa0694400 | Msa1371410 | 0.821854 | 3.236285e-53 | -8.615850e-47 |
| Msa0694400 | Msa1385480 | 0.994101 | 1.413595e-204 | -8.615850e-47 |
| Msa0694400 | Msa1387750 | 0.818793 | 1.628276e-52 | -8.615850e-47 |
| Msa0694400 | Msa1390760 | 0.910279 | 2.237976e-82 | -8.615850e-47 |
| Msa0694400 | Msa1407550 | 0.886804 | 2.486496e-72 | -8.615850e-47 |
| Msa0694400 | Msa1413570 | 0.875265 | 3.532037e-68 | -8.615850e-47 |
| Msa0694400 | Msa1415620 | 0.818740 | 1.673937e-52 | -8.615850e-47 |
| Msa0694400 | Msa1424570 | 0.849667 | 2.790505e-60 | -8.615850e-47 |
| Msa0694400 | Msa1432310 | 0.903635 | 2.828788e-79 | -8.615850e-47 |
| Msa0694400 | Msa1446410 | 0.866265 | 3.236335e-65 | -8.615850e-47 |
| Msa0694400 | Msa1450560 | 0.866545 | 2.635779e-65 | -8.615850e-47 |
| Msa0694400 | Msa1453530 | 0.815564 | 8.667066e-52 | -8.615850e-47 |
| Msa0694400 | Msa1463570 | 0.945707 | 1.841960e-104 | -8.615850e-47 |
| Msa0694400 | Msa1465700 | 0.896669 | 2.954366e-76 | -8.615850e-47 |
| Msa0123290 | Msa0694400 | 0.834951 | 2.227254e-56 | -8.615850e-47 |
| Msa0127230 | Msa0694400 | 0.825177 | 5.402739e-54 | -8.615850e-47 |
| Msa0128330 | Msa0694400 | 0.947068 | 1.378858e-105 | -8.615850e-47 |
| Msa0128750 | Msa0694400 | 0.832888 | 7.311001e-56 | -8.615850e-47 |
| Msa0132460 | Msa0694400 | 0.909993 | 3.077808e-82 | -8.615850e-47 |
| Msa0134580 | Msa0694400 | 0.889440 | 2.418200e-73 | -8.615850e-47 |
| Msa0136400 | Msa0694400 | 0.819520 | 1.112552e-52 | -8.615850e-47 |
| Msa0144810 | Msa0694400 | 0.823660 | 1.229158e-53 | -8.615850e-47 |
| Msa0146610 | Msa0694400 | 0.815700 | 8.083025e-52 | -8.615850e-47 |
| Msa0167860 | Msa0694400 | 0.925916 | 9.577550e-91 | -8.615850e-47 |
| Msa0168320 | Msa0694400 | 0.847092 | 1.439091e-59 | -8.615850e-47 |
| Msa0174580 | Msa0694400 | 0.945973 | 1.115930e-104 | -8.615850e-47 |
| Msa0182050 | Msa0694400 | 0.915067 | 9.134298e-85 | -8.615850e-47 |
| Msa0182100 | Msa0694400 | 0.899954 | 1.187696e-77 | -8.615850e-47 |
| Msa0187810 | Msa0694400 | 0.803206 | 3.893653e-49 | -8.615850e-47 |
| Msa0188740 | Msa0694400 | 0.827224 | 1.760624e-54 | -8.615850e-47 |
| Msa0191450 | Msa0694400 | 0.860971 | 1.423371e-63 | -8.615850e-47 |
| Msa0191550 | Msa0694400 | 0.872233 | 3.721757e-67 | -8.615850e-47 |
| Msa0192300 | Msa0694400 | 0.911584 | 5.156352e-83 | -8.615850e-47 |
| Msa0192490 | Msa0694400 | 0.817374 | 3.409365e-52 | -8.615850e-47 |
| Msa0194940 | Msa0694400 | 0.869501 | 2.952689e-66 | -8.615850e-47 |
| Msa0216200 | Msa0694400 | 0.807437 | 5.058086e-50 | -8.615850e-47 |
| Msa0219090 | Msa0694400 | 0.814763 | 1.305532e-51 | -8.615850e-47 |
| Msa0223440 | Msa0694400 | 0.801278 | 9.710241e-49 | -8.615850e-47 |
| Msa0225350 | Msa0694400 | 0.817270 | 3.596800e-52 | -8.615850e-47 |
| Msa0233550 | Msa0694400 | 0.836322 | 1.001416e-56 | -8.615850e-47 |
| Msa0234850 | Msa0694400 | 0.820871 | 5.454262e-53 | -8.615850e-47 |
| Msa0234900 | Msa0694400 | 0.813492 | 2.490479e-51 | -8.615850e-47 |
| Msa0235050 | Msa0694400 | 0.856404 | 3.291322e-62 | -8.615850e-47 |
| Msa0369410 | Msa0694400 | 0.866732 | 2.299502e-65 | -8.615850e-47 |
| Msa0371490 | Msa0694400 | 0.843020 | 1.811121e-58 | -8.615850e-47 |
| Msa0376850 | Msa0694400 | 0.809545 | 1.794751e-50 | -8.615850e-47 |
| Msa0377370 | Msa0694400 | 0.845814 | 3.212289e-59 | -8.615850e-47 |
| Msa0377520 | Msa0694400 | 0.866854 | 2.102499e-65 | -8.615850e-47 |
| Msa0382670 | Msa0694400 | 0.810434 | 1.154891e-50 | -8.615850e-47 |
| Msa0419710 | Msa0694400 | 0.811325 | 7.409525e-51 | -8.615850e-47 |
| Msa0426090 | Msa0694400 | 0.902233 | 1.194629e-78 | -8.615850e-47 |
| Msa0426250 | Msa0694400 | 0.911930 | 3.479038e-83 | -8.615850e-47 |
| Msa0432750 | Msa0694400 | 0.816560 | 5.192587e-52 | -8.615850e-47 |
| Msa0450150 | Msa0694400 | 0.856170 | 3.855358e-62 | -8.615850e-47 |
| Msa0463520 | Msa0694400 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
| Msa0472480 | Msa0694400 | 0.894799 | 1.755373e-75 | -8.615850e-47 |
| Msa0475810 | Msa0694400 | 0.839830 | 1.253136e-57 | -8.615850e-47 |
| Msa0479980 | Msa0694400 | 0.814212 | 1.727966e-51 | -8.615850e-47 |
| Msa0481520 | Msa0694400 | 0.890125 | 1.306848e-73 | -8.615850e-47 |
| Msa0481800 | Msa0694400 | 0.824114 | 9.616788e-54 | -8.615850e-47 |
| Msa0482560 | Msa0694400 | 0.880382 | 5.748976e-70 | -8.615850e-47 |
| Msa0239420 | Msa0694400 | 0.822242 | 2.631171e-53 | -8.615850e-47 |
| Msa0264640 | Msa0694400 | 0.845914 | 3.016088e-59 | -8.615850e-47 |
| Msa0270160 | Msa0694400 | 0.852327 | 4.963531e-61 | -8.615850e-47 |
| Msa0277600 | Msa0694400 | 0.909055 | 8.693439e-82 | -8.615850e-47 |
| Msa0281330 | Msa0694400 | 0.808656 | 2.782679e-50 | -8.615850e-47 |
| Msa0281370 | Msa0694400 | 0.836274 | 1.029870e-56 | -8.615850e-47 |
| Msa0301220 | Msa0694400 | 0.846719 | 1.820182e-59 | -8.615850e-47 |
| Msa0301250 | Msa0694400 | 0.918172 | 2.162715e-86 | -8.615850e-47 |
| Msa0313060 | Msa0694400 | 0.918523 | 1.402638e-86 | -8.615850e-47 |
| Msa0315430 | Msa0694400 | 0.939239 | 1.775602e-99 | -8.615850e-47 |
| Msa0340560 | Msa0694400 | 0.821866 | 3.214190e-53 | -8.615850e-47 |
| Msa0485220 | Msa0694400 | 0.809683 | 1.675865e-50 | -8.615850e-47 |
| Msa0511760 | Msa0694400 | 0.883609 | 3.883413e-71 | -8.615850e-47 |
| Msa0516830 | Msa0694400 | 0.809843 | 1.548259e-50 | -8.615850e-47 |
| Msa0517480 | Msa0694400 | 0.863024 | 3.343527e-64 | -8.615850e-47 |
| Msa0529900 | Msa0694400 | 0.847802 | 9.181844e-60 | -8.615850e-47 |
| Msa0547920 | Msa0694400 | 0.919490 | 4.215817e-87 | -8.615850e-47 |
| Msa0550490 | Msa0694400 | 0.810925 | 9.043591e-51 | -8.615850e-47 |
| Msa0573550 | Msa0694400 | 0.920820 | 7.874897e-88 | -8.615850e-47 |
| Msa0574780 | Msa0694400 | 0.874027 | 9.308766e-68 | -8.615850e-47 |
| Msa0578010 | Msa0694400 | 0.867926 | 9.545867e-66 | -8.615850e-47 |
| Msa0579830 | Msa0694400 | 0.871766 | 5.321810e-67 | -8.615850e-47 |
| Msa0585570 | Msa0694400 | 0.821245 | 4.472844e-53 | -8.615850e-47 |
| Msa0589160 | Msa0694400 | 0.808719 | 2.697347e-50 | -8.615850e-47 |
| Msa0597240 | Msa0694400 | 0.900284 | 8.547027e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694400 | MtrunA17_Chr4g0037721 | 99.614 | 259 | 1 | 0 | 26 | 284 | 1 | 259 | 0.0 | 521 |
| Msa0694400 | MtrunA17_Chr7g0224411 | 93.077 | 260 | 17 | 1 | 26 | 284 | 1 | 260 | 4.48e-178 | 491 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694400 | AT3G62870.1 | 88.031 | 259 | 28 | 1 | 26 | 284 | 1 | 256 | 8.47e-170 | 470 |
| Msa0694400 | AT2G47610.1 | 87.552 | 241 | 30 | 0 | 44 | 284 | 17 | 257 | 7.26e-161 | 447 |
Find 95 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTCTTGGCTTGGGATT+TGG | 0.209141 | 4_4:+63685180 | None:intergenic |
| ATTTGAGTAAATAACAAAAT+TGG | 0.218176 | 4_4:+63685078 | None:intergenic |
| TACCTCTGGCGACAGAATTT+TGG | 0.230393 | 4_4:-63684940 | Msa0694400:three_prime_UTR |
| AGGCCATACTTCACATTAAT+AGG | 0.264776 | 4_4:+63685801 | None:intergenic |
| CTTTGCCTTGGTCTTGGCTT+GGG | 0.278418 | 4_4:+63685174 | None:intergenic |
| CAGGGTCCTAGAGGCGATTA+AGG | 0.309642 | 4_4:-63685354 | Msa0694400:intron |
| CCTTTCCTTTGCCTTGGTCT+TGG | 0.313711 | 4_4:+63685168 | None:intergenic |
| CTTCGGCCACTTCACGAATC+TGG | 0.319581 | 4_4:+63686855 | None:intergenic |
| CCTTTGCCTTGGTCTTGGCT+TGG | 0.320697 | 4_4:+63685173 | None:intergenic |
| GAGAAGCGTCCAAAGCAATT+TGG | 0.321546 | 4_4:-63686913 | Msa0694400:CDS |
| TTCTTCTTTGAAGCTGCAAC+TGG | 0.338108 | 4_4:+63687060 | None:intergenic |
| TTGCCCTTAACAATACAGTA+TGG | 0.340642 | 4_4:+63685555 | None:intergenic |
| CATTCTCTGGGCAGCCTCCT+TGG | 0.347883 | 4_4:+63685138 | None:intergenic |
| CCTCCAATTCCAAATTGCTT+TGG | 0.359017 | 4_4:+63686904 | None:intergenic |
| AAGCCTATTAATGTGAAGTA+TGG | 0.361147 | 4_4:-63685804 | Msa0694400:CDS |
| CGTCCAAAGCAATTTGGAAT+TGG | 0.369614 | 4_4:-63686907 | Msa0694400:CDS |
| TTCTTCTCAGCCTTGTCCTC+AGG | 0.377096 | 4_4:+63685885 | None:intergenic |
| CTCTGCACCTGAACGTTCTT+CGG | 0.382996 | 4_4:+63686838 | None:intergenic |
| GAAGTGGGGTGGTGGAATCA+TGG | 0.397393 | 4_4:-63685206 | Msa0694400:CDS |
| AATCCCATACTGTATTGTTA+AGG | 0.413635 | 4_4:-63685559 | Msa0694400:CDS |
| AATAAGCCTTTCCTTTGCCT+TGG | 0.418296 | 4_4:+63685162 | None:intergenic |
| TCTGGCTTCCAGCCTTGTGC+AGG | 0.421984 | 4_4:-63685590 | Msa0694400:CDS |
| ACAACTCCTAGGTCATTCTC+TGG | 0.422899 | 4_4:+63685125 | None:intergenic |
| TCCATCTTCCTGCACAAGGC+TGG | 0.428911 | 4_4:+63685582 | None:intergenic |
| AAGGGCTCAGGCAGAGGCTG+AGG | 0.430646 | 4_4:-63685847 | Msa0694400:CDS |
| TACAGGAAGAAGTGGGGTGG+TGG | 0.431668 | 4_4:-63685214 | Msa0694400:CDS |
| TCCAGCCTTGTGCAGGAAGA+TGG | 0.436588 | 4_4:-63685583 | Msa0694400:CDS |
| ACCCCATTGAATTAGTTGTC+TGG | 0.442276 | 4_4:-63685608 | Msa0694400:CDS |
| AGCCAGACAACTAATTCAAT+GGG | 0.443985 | 4_4:+63685606 | None:intergenic |
| TGAGGAGTACAGGAAGAAGT+GGG | 0.451890 | 4_4:-63685221 | Msa0694400:CDS |
| ATCCCATACTGTATTGTTAA+GGG | 0.456742 | 4_4:-63685558 | Msa0694400:CDS |
| TATAAAATGGGACTCCAACT+AGG | 0.466994 | 4_4:-63687278 | None:intergenic |
| AAGACAAAATGGAGTTCAGC+AGG | 0.470262 | 4_4:-63685373 | Msa0694400:CDS |
| ATGAGGAGTACAGGAAGAAG+TGG | 0.472066 | 4_4:-63685222 | Msa0694400:CDS |
| CGTTTGTTATTTACAATAGC+CGG | 0.482373 | 4_4:-63685010 | Msa0694400:three_prime_UTR |
| CCAAAGCAATTTGGAATTGG+AGG | 0.482647 | 4_4:-63686904 | Msa0694400:CDS |
| CATGAGCAATCACGACAAGC+TGG | 0.488943 | 4_4:+63685637 | None:intergenic |
| TCAAGATACTTCTGAAGTAC+AGG | 0.489642 | 4_4:-63685908 | Msa0694400:CDS |
| TTTGAAAAGGGCTCAGGCAG+AGG | 0.490294 | 4_4:-63685853 | Msa0694400:CDS |
| AAGTGGGGTGGTGGAATCAT+GGG | 0.491130 | 4_4:-63685205 | Msa0694400:CDS |
| ATCATAAACAATATTACCTC+TGG | 0.492815 | 4_4:-63684954 | Msa0694400:three_prime_UTR |
| AAGCCAGACAACTAATTCAA+TGG | 0.495839 | 4_4:+63685605 | None:intergenic |
| TGAGGACAAGGCTGAGAAGA+AGG | 0.500213 | 4_4:-63685883 | Msa0694400:CDS |
| TTAGTGAACTGGTTCAAAGC+TGG | 0.502229 | 4_4:+63686778 | None:intergenic |
| ATATTGTTTATGATGAATCC+AGG | 0.507235 | 4_4:+63684963 | None:intergenic |
| GAAGTGGCCGAAGAACGTTC+AGG | 0.510705 | 4_4:-63686845 | Msa0694400:CDS |
| ATGACAAGTATGAGGAGTAC+AGG | 0.517239 | 4_4:-63685231 | Msa0694400:CDS |
| AATCTGGTCAAATCCCTCTT+CGG | 0.518321 | 4_4:+63686871 | None:intergenic |
| ATAAAATGGGACTCCAACTA+GGG | 0.525396 | 4_4:-63687277 | None:intergenic |
| GAAGTACAGGCCTGAGGACA+AGG | 0.533130 | 4_4:-63685895 | Msa0694400:CDS |
| ACAACAAACTTACACTTCCT+AGG | 0.547646 | 4_4:+63685526 | None:intergenic |
| CAGAATATAACACAACTCCT+AGG | 0.549453 | 4_4:+63685114 | None:intergenic |
| AGGTGCATTGCCACCGAAGA+GGG | 0.550648 | 4_4:-63686884 | Msa0694400:CDS |
| TGCCCTTAACAATACAGTAT+GGG | 0.553243 | 4_4:+63685556 | None:intergenic |
| TTTGGACGCTTCTCAAACAG+CGG | 0.554899 | 4_4:+63686922 | None:intergenic |
| TTGGACGCTTCTCAAACAGC+GGG | 0.558308 | 4_4:+63686923 | None:intergenic |
| CAAACTTACACTTCCTAGGC+GGG | 0.561796 | 4_4:+63685530 | None:intergenic |
| ATTTGACCAGATTCGTGAAG+TGG | 0.563086 | 4_4:-63686861 | Msa0694400:CDS |
| AAATTTCAATGACAAGTATG+AGG | 0.565347 | 4_4:-63685239 | Msa0694400:CDS |
| AGCATTAGCACCAGCAGCAA+TGG | 0.566182 | 4_4:-63687216 | Msa0694400:intron |
| GTGAACTGGTTCAAAGCTGG+TGG | 0.574137 | 4_4:+63686781 | None:intergenic |
| TTCAGGTGCAGAGGAAGAAG+AGG | 0.574820 | 4_4:-63686828 | Msa0694400:CDS |
| AGGGCTCAGGCAGAGGCTGA+GGG | 0.575749 | 4_4:-63685846 | Msa0694400:CDS |
| ATGCCACCTTAATCGCCTCT+AGG | 0.580251 | 4_4:+63685348 | None:intergenic |
| ATGAGCAATCACGACAAGCT+GGG | 0.581861 | 4_4:+63685638 | None:intergenic |
| GTTAAGGGCAAGGCCCGCCT+AGG | 0.589576 | 4_4:-63685543 | Msa0694400:CDS |
| AGTATACGCACCATTGCTGC+TGG | 0.591788 | 4_4:+63687206 | None:intergenic |
| CGAAGAACGTTCAGGTGCAG+AGG | 0.592402 | 4_4:-63686837 | Msa0694400:CDS |
| CCAAGCCAAGACCAAGGCAA+AGG | 0.598075 | 4_4:-63685173 | Msa0694400:CDS |
| GATTTCCATCTTCCTGCACA+AGG | 0.600419 | 4_4:+63685578 | None:intergenic |
| ACGCTTCTCAAACAGCGGGT+TGG | 0.601848 | 4_4:+63686927 | None:intergenic |
| ATACTGTATTGTTAAGGGCA+AGG | 0.604440 | 4_4:-63685553 | Msa0694400:CDS |
| TGAGGTAGGTAACATGATTG+AGG | 0.604638 | 4_4:+63685781 | None:intergenic |
| ACAAGGCTGAGAAGAAGGAG+AGG | 0.612342 | 4_4:-63685878 | Msa0694400:CDS |
| AAAGGAAAGGCTTATTGCCA+AGG | 0.613232 | 4_4:-63685155 | Msa0694400:CDS |
| TGTTACCTACCTCATCGAGC+AGG | 0.615302 | 4_4:-63685772 | Msa0694400:intron |
| GGCTGCCCAGAGAATGACCT+AGG | 0.616298 | 4_4:-63685131 | Msa0694400:exon |
| AAGTATCTTGAACAAGCTTG+TGG | 0.617064 | 4_4:+63685920 | None:intergenic |
| CCAAGACCAAGGCAAAGGAA+AGG | 0.622185 | 4_4:-63685168 | Msa0694400:CDS |
| GAGTACAGGAAGAAGTGGGG+TGG | 0.625879 | 4_4:-63685217 | Msa0694400:CDS |
| GAGGAGTACAGGAAGAAGTG+GGG | 0.627370 | 4_4:-63685220 | Msa0694400:CDS |
| CTGGTCAAATCCCTCTTCGG+TGG | 0.631531 | 4_4:+63686874 | None:intergenic |
| GGAGTTCAGCAGGGTCCTAG+AGG | 0.633517 | 4_4:-63685363 | Msa0694400:CDS |
| TACCAAAATTCTGTCGCCAG+AGG | 0.645577 | 4_4:+63684938 | None:intergenic |
| GAGGTGCATTGCCACCGAAG+AGG | 0.649300 | 4_4:-63686885 | Msa0694400:CDS |
| CAACTCCTAGGTCATTCTCT+GGG | 0.652662 | 4_4:+63685126 | None:intergenic |
| GGAAAGGCTTATTGCCAAGG+AGG | 0.665686 | 4_4:-63685152 | Msa0694400:CDS |
| CAAATCCCAAGCCAAGACCA+AGG | 0.672977 | 4_4:-63685179 | Msa0694400:CDS |
| ACAAACTTACACTTCCTAGG+CGG | 0.677034 | 4_4:+63685529 | None:intergenic |
| GAAAGACAACCTGCTCGATG+AGG | 0.683651 | 4_4:+63685763 | None:intergenic |
| GACAACCTGCTCGATGAGGT+AGG | 0.683860 | 4_4:+63685767 | None:intergenic |
| AGACAAAATGGAGTTCAGCA+GGG | 0.687168 | 4_4:-63685372 | Msa0694400:CDS |
| GCTAATGCTCTGTGTCTGTG+CGG | 0.698939 | 4_4:+63687230 | None:intergenic |
| ACTTCTGAAGTACAGGCCTG+AGG | 0.703947 | 4_4:-63685901 | Msa0694400:CDS |
| GCCAGACAACTAATTCAATG+GGG | 0.748421 | 4_4:+63685607 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTATTGTAATGTT+TGG | - | chr4_4:63685435-63685454 | Msa0694400:intron | 10.0% |
| !!! | TTTTTGTAATATGTTAATTA+TGG | - | chr4_4:63685503-63685522 | Msa0694400:intron | 10.0% |
| !! | AAATAAATTATTGTAATGTT+TGG | - | chr4_4:63685435-63685454 | Msa0694400:intron | 10.0% |
| !!! | TTTTTGTAATATGTTAATTA+TGG | - | chr4_4:63685503-63685522 | Msa0694400:intron | 10.0% |
| !! | GTAAATTGTAAAATTAATAC+AGG | - | chr4_4:63685525-63685544 | Msa0694400:intron | 15.0% |
| !! | ATTTGAGTAAATAACAAAAT+TGG | + | chr4_4:63687090-63687109 | None:intergenic | 15.0% |
| !! | GTAAATTGTAAAATTAATAC+AGG | - | chr4_4:63685525-63685544 | Msa0694400:intron | 15.0% |
| !! | ATTTGAGTAAATAACAAAAT+TGG | + | chr4_4:63687090-63687109 | None:intergenic | 15.0% |
| !! | GTAAAATTAATACAGGATTT+CGG | - | chr4_4:63685532-63685551 | Msa0694400:intron | 20.0% |
| !!! | GTTATTTCAAAAGCTTAAAT+GGG | + | chr4_4:63685838-63685857 | None:intergenic | 20.0% |
| !!! | AGTTATTTCAAAAGCTTAAA+TGG | + | chr4_4:63685839-63685858 | None:intergenic | 20.0% |
| !! | ATCAGTATATTGTTATATCA+GGG | + | chr4_4:63686155-63686174 | None:intergenic | 20.0% |
| !! | AATCAGTATATTGTTATATC+AGG | + | chr4_4:63686156-63686175 | None:intergenic | 20.0% |
| !! | CAGTAAAATAACAAATTAGA+AGG | + | chr4_4:63686458-63686477 | None:intergenic | 20.0% |
| !! | TTCAGTCATAAATCATATAT+AGG | + | chr4_4:63686675-63686694 | None:intergenic | 20.0% |
| !! | TGTTAAAAATGAAGACAAAA+TGG | - | chr4_4:63686781-63686800 | Msa0694400:CDS | 20.0% |
| !! | TAAATAGTAGAGAACAAAAA+TGG | + | chr4_4:63686855-63686874 | None:intergenic | 20.0% |
| !! | ATAAAACATCTCAGTTTAAA+TGG | + | chr4_4:63686888-63686907 | None:intergenic | 20.0% |
| !!! | TTTTATGTTGGTTTTATTTC+AGG | - | chr4_4:63686902-63686921 | Msa0694400:CDS | 20.0% |
| !! | TTGAAGAAAAAATAATACTC+CGG | + | chr4_4:63687177-63687196 | None:intergenic | 20.0% |
| !! | GTAAAATTAATACAGGATTT+CGG | - | chr4_4:63685532-63685551 | Msa0694400:intron | 20.0% |
| !!! | GTTATTTCAAAAGCTTAAAT+GGG | + | chr4_4:63685838-63685857 | None:intergenic | 20.0% |
| !!! | AGTTATTTCAAAAGCTTAAA+TGG | + | chr4_4:63685839-63685858 | None:intergenic | 20.0% |
| !! | ATCAGTATATTGTTATATCA+GGG | + | chr4_4:63686155-63686174 | None:intergenic | 20.0% |
| !! | AATCAGTATATTGTTATATC+AGG | + | chr4_4:63686156-63686175 | None:intergenic | 20.0% |
| !! | CAGTAAAATAACAAATTAGA+AGG | + | chr4_4:63686458-63686477 | None:intergenic | 20.0% |
| !! | TTCAGTCATAAATCATATAT+AGG | + | chr4_4:63686675-63686694 | None:intergenic | 20.0% |
| !! | TGTTAAAAATGAAGACAAAA+TGG | - | chr4_4:63686781-63686800 | Msa0694400:CDS | 20.0% |
| !! | TAAATAGTAGAGAACAAAAA+TGG | + | chr4_4:63686855-63686874 | None:intergenic | 20.0% |
| !! | ATAAAACATCTCAGTTTAAA+TGG | + | chr4_4:63686888-63686907 | None:intergenic | 20.0% |
| !!! | TTTTATGTTGGTTTTATTTC+AGG | - | chr4_4:63686902-63686921 | Msa0694400:CDS | 20.0% |
| !! | TTGAAGAAAAAATAATACTC+CGG | + | chr4_4:63687177-63687196 | None:intergenic | 20.0% |
| !!! | GTATTTGTTTTCAAATTTGC+AGG | - | chr4_4:63685206-63685225 | Msa0694400:CDS | 25.0% |
| ! | AGTTGAAAACAAAATTAAGC+AGG | - | chr4_4:63685700-63685719 | Msa0694400:intron | 25.0% |
| ! | GTTGAAAACAAAATTAAGCA+GGG | - | chr4_4:63685701-63685720 | Msa0694400:intron | 25.0% |
| ! | ATTCTATGATTTCATTGCTT+TGG | - | chr4_4:63685916-63685935 | Msa0694400:CDS | 25.0% |
| ! | ATATCAATCTACCATTTCAT+AGG | + | chr4_4:63685962-63685981 | None:intergenic | 25.0% |
| ! | CGTTTAACAATTATTCGTTA+TGG | - | chr4_4:63686089-63686108 | Msa0694400:intron | 25.0% |
| ! | TTTATGACTGAATTGAATTC+AGG | - | chr4_4:63686683-63686702 | Msa0694400:intron | 25.0% |
| !!! | TTTGTCTTCATTTTTAACAG+TGG | + | chr4_4:63686780-63686799 | None:intergenic | 25.0% |
| !! | TAAACTGAGATGTTTTATGT+TGG | - | chr4_4:63686890-63686909 | Msa0694400:CDS | 25.0% |
| ! | AAATTTCAATGACAAGTATG+AGG | - | chr4_4:63686926-63686945 | Msa0694400:CDS | 25.0% |
| !!! | ATTGAAGTTTTTTTGTAGTC+TGG | - | chr4_4:63687108-63687127 | Msa0694400:intron | 25.0% |
| !! | GTAAATAACAAACGTTTTTG+TGG | + | chr4_4:63687149-63687168 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTCAAGTTATCC+TGG | - | chr4_4:63687184-63687203 | Msa0694400:intron | 25.0% |
| ! | ATATTGTTTATGATGAATCC+AGG | + | chr4_4:63687205-63687224 | None:intergenic | 25.0% |
| ! | ATCATAAACAATATTACCTC+TGG | - | chr4_4:63687211-63687230 | Msa0694400:intron | 25.0% |
| !!! | GTATTTGTTTTCAAATTTGC+AGG | - | chr4_4:63685206-63685225 | Msa0694400:CDS | 25.0% |
| ! | AGTTGAAAACAAAATTAAGC+AGG | - | chr4_4:63685700-63685719 | Msa0694400:intron | 25.0% |
| ! | GTTGAAAACAAAATTAAGCA+GGG | - | chr4_4:63685701-63685720 | Msa0694400:intron | 25.0% |
| ! | ATTCTATGATTTCATTGCTT+TGG | - | chr4_4:63685916-63685935 | Msa0694400:CDS | 25.0% |
| ! | ATATCAATCTACCATTTCAT+AGG | + | chr4_4:63685962-63685981 | None:intergenic | 25.0% |
| ! | CGTTTAACAATTATTCGTTA+TGG | - | chr4_4:63686089-63686108 | Msa0694400:intron | 25.0% |
| ! | TTTATGACTGAATTGAATTC+AGG | - | chr4_4:63686683-63686702 | Msa0694400:intron | 25.0% |
| !!! | TTTGTCTTCATTTTTAACAG+TGG | + | chr4_4:63686780-63686799 | None:intergenic | 25.0% |
| !! | TAAACTGAGATGTTTTATGT+TGG | - | chr4_4:63686890-63686909 | Msa0694400:CDS | 25.0% |
| ! | AAATTTCAATGACAAGTATG+AGG | - | chr4_4:63686926-63686945 | Msa0694400:CDS | 25.0% |
| !!! | ATTGAAGTTTTTTTGTAGTC+TGG | - | chr4_4:63687108-63687127 | Msa0694400:intron | 25.0% |
| !! | GTAAATAACAAACGTTTTTG+TGG | + | chr4_4:63687149-63687168 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTCAAGTTATCC+TGG | - | chr4_4:63687184-63687203 | Msa0694400:intron | 25.0% |
| ! | ATATTGTTTATGATGAATCC+AGG | + | chr4_4:63687205-63687224 | None:intergenic | 25.0% |
| ! | ATCATAAACAATATTACCTC+TGG | - | chr4_4:63687211-63687230 | Msa0694400:intron | 25.0% |
| ! | TGATAAGTACTGTGAAGAAA+TGG | + | chr4_4:63685013-63685032 | None:intergenic | 30.0% |
| ! | TTCATCGTGTTTGATTTCTT+AGG | - | chr4_4:63685059-63685078 | Msa0694400:three_prime_UTR | 30.0% |
| !!! | GATCTGATTTTGATTGCTAT+AGG | - | chr4_4:63685457-63685476 | Msa0694400:intron | 30.0% |
| ! | GTAGATAAGCTTTTTATCCA+AGG | + | chr4_4:63685558-63685577 | None:intergenic | 30.0% |
| ! | AACAAAATTAAGCAGGGTTT+TGG | - | chr4_4:63685707-63685726 | Msa0694400:intron | 30.0% |
| CTTATGCAATAAGCTTCAAA+TGG | + | chr4_4:63685733-63685752 | None:intergenic | 30.0% | |
| ! | TTTGAAGCTTATTGCATAAG+TGG | - | chr4_4:63685733-63685752 | Msa0694400:intron | 30.0% |
| GTTATGGTTATATTAGAGTC+TGG | - | chr4_4:63686105-63686124 | Msa0694400:intron | 30.0% | |
| ! | GAGGCATTACTTTATTAGTT+TGG | - | chr4_4:63686127-63686146 | Msa0694400:intron | 30.0% |
| AAGCCTATTAATGTGAAGTA+TGG | - | chr4_4:63686361-63686380 | Msa0694400:intron | 30.0% | |
| AATCCCATACTGTATTGTTA+AGG | - | chr4_4:63686606-63686625 | Msa0694400:intron | 30.0% | |
| ATCCCATACTGTATTGTTAA+GGG | - | chr4_4:63686607-63686626 | Msa0694400:intron | 30.0% | |
| TAATCTCTCTACACTTAAAC+AGG | - | chr4_4:63686718-63686737 | Msa0694400:intron | 30.0% | |
| ! | ACGTTTTTGTGGTGATAATT+AGG | + | chr4_4:63687138-63687157 | None:intergenic | 30.0% |
| !! | CGTTTGTTATTTACAATAGC+CGG | - | chr4_4:63687155-63687174 | Msa0694400:intron | 30.0% |
| ! | TGATAAGTACTGTGAAGAAA+TGG | + | chr4_4:63685013-63685032 | None:intergenic | 30.0% |
| ! | TTCATCGTGTTTGATTTCTT+AGG | - | chr4_4:63685059-63685078 | Msa0694400:three_prime_UTR | 30.0% |
| !!! | GATCTGATTTTGATTGCTAT+AGG | - | chr4_4:63685457-63685476 | Msa0694400:intron | 30.0% |
| ! | GTAGATAAGCTTTTTATCCA+AGG | + | chr4_4:63685558-63685577 | None:intergenic | 30.0% |
| ! | AACAAAATTAAGCAGGGTTT+TGG | - | chr4_4:63685707-63685726 | Msa0694400:intron | 30.0% |
| CTTATGCAATAAGCTTCAAA+TGG | + | chr4_4:63685733-63685752 | None:intergenic | 30.0% | |
| ! | TTTGAAGCTTATTGCATAAG+TGG | - | chr4_4:63685733-63685752 | Msa0694400:intron | 30.0% |
| GTTATGGTTATATTAGAGTC+TGG | - | chr4_4:63686105-63686124 | Msa0694400:intron | 30.0% | |
| ! | GAGGCATTACTTTATTAGTT+TGG | - | chr4_4:63686127-63686146 | Msa0694400:intron | 30.0% |
| AAGCCTATTAATGTGAAGTA+TGG | - | chr4_4:63686361-63686380 | Msa0694400:intron | 30.0% | |
| AATCCCATACTGTATTGTTA+AGG | - | chr4_4:63686606-63686625 | Msa0694400:intron | 30.0% | |
| ATCCCATACTGTATTGTTAA+GGG | - | chr4_4:63686607-63686626 | Msa0694400:intron | 30.0% | |
| TAATCTCTCTACACTTAAAC+AGG | - | chr4_4:63686718-63686737 | Msa0694400:intron | 30.0% | |
| ! | ACGTTTTTGTGGTGATAATT+AGG | + | chr4_4:63687138-63687157 | None:intergenic | 30.0% |
| !! | CGTTTGTTATTTACAATAGC+CGG | - | chr4_4:63687155-63687174 | Msa0694400:intron | 30.0% |
| AACGAAGATCTGAATTGAGA+TGG | + | chr4_4:63684985-63685004 | None:intergenic | 35.0% | |
| ATTTCTTAGGCTCCCAAAAA+AGG | - | chr4_4:63685072-63685091 | Msa0694400:three_prime_UTR | 35.0% | |
| !!! | GGAGCTTTAACACCTTTTTT+GGG | + | chr4_4:63685087-63685106 | None:intergenic | 35.0% |
| !!! | TGGAGCTTTAACACCTTTTT+TGG | + | chr4_4:63685088-63685107 | None:intergenic | 35.0% |
| AAATGAGATTGGAATTGACG+CGG | + | chr4_4:63685143-63685162 | None:intergenic | 35.0% | |
| TCGAAAGTCGTAAATGAGAT+TGG | + | chr4_4:63685154-63685173 | None:intergenic | 35.0% | |
| ! | GTTTTCAAATTTGCAGGAGA+AGG | - | chr4_4:63685212-63685231 | Msa0694400:CDS | 35.0% |
| AAAACCCTCGACAAAAATCT+AGG | - | chr4_4:63685408-63685427 | Msa0694400:CDS | 35.0% | |
| ! | GTTGCTTTCATAAGCTATCT+TGG | - | chr4_4:63685661-63685680 | Msa0694400:intron | 35.0% |
| ! | TTGCTTTGGTTTCTTTCTAC+TGG | - | chr4_4:63685930-63685949 | Msa0694400:intron | 35.0% |
| ! | ACTGGTTTCTTCCTATGAAA+TGG | - | chr4_4:63685948-63685967 | Msa0694400:intron | 35.0% |
| ATGGTTATATTAGAGTCTGG+AGG | - | chr4_4:63686108-63686127 | Msa0694400:intron | 35.0% | |
| AAGTATCTTGAACAAGCTTG+TGG | + | chr4_4:63686248-63686267 | None:intergenic | 35.0% | |
| !! | TCAAGATACTTCTGAAGTAC+AGG | - | chr4_4:63686257-63686276 | Msa0694400:intron | 35.0% |
| AGGCCATACTTCACATTAAT+AGG | + | chr4_4:63686367-63686386 | None:intergenic | 35.0% | |
| GAAGGAAAAATCAGCAATCT+TGG | + | chr4_4:63686440-63686459 | None:intergenic | 35.0% | |
| AGCCAGACAACTAATTCAAT+GGG | + | chr4_4:63686562-63686581 | None:intergenic | 35.0% | |
| AAGCCAGACAACTAATTCAA+TGG | + | chr4_4:63686563-63686582 | None:intergenic | 35.0% | |
| TGCCCTTAACAATACAGTAT+GGG | + | chr4_4:63686612-63686631 | None:intergenic | 35.0% | |
| TTGCCCTTAACAATACAGTA+TGG | + | chr4_4:63686613-63686632 | None:intergenic | 35.0% | |
| ATACTGTATTGTTAAGGGCA+AGG | - | chr4_4:63686612-63686631 | Msa0694400:intron | 35.0% | |
| ACAACAAACTTACACTTCCT+AGG | + | chr4_4:63686642-63686661 | None:intergenic | 35.0% | |
| ! | AAACAGCAGCAGTTTTCTTA+TGG | + | chr4_4:63686748-63686767 | None:intergenic | 35.0% |
| CAGAATATAACACAACTCCT+AGG | + | chr4_4:63687054-63687073 | None:intergenic | 35.0% | |
| AACGAAGATCTGAATTGAGA+TGG | + | chr4_4:63684985-63685004 | None:intergenic | 35.0% | |
| ATTTCTTAGGCTCCCAAAAA+AGG | - | chr4_4:63685072-63685091 | Msa0694400:three_prime_UTR | 35.0% | |
| !!! | GGAGCTTTAACACCTTTTTT+GGG | + | chr4_4:63685087-63685106 | None:intergenic | 35.0% |
| !!! | TGGAGCTTTAACACCTTTTT+TGG | + | chr4_4:63685088-63685107 | None:intergenic | 35.0% |
| AAATGAGATTGGAATTGACG+CGG | + | chr4_4:63685143-63685162 | None:intergenic | 35.0% | |
| TCGAAAGTCGTAAATGAGAT+TGG | + | chr4_4:63685154-63685173 | None:intergenic | 35.0% | |
| ! | GTTTTCAAATTTGCAGGAGA+AGG | - | chr4_4:63685212-63685231 | Msa0694400:CDS | 35.0% |
| AAAACCCTCGACAAAAATCT+AGG | - | chr4_4:63685408-63685427 | Msa0694400:CDS | 35.0% | |
| ! | GTTGCTTTCATAAGCTATCT+TGG | - | chr4_4:63685661-63685680 | Msa0694400:intron | 35.0% |
| ! | TTGCTTTGGTTTCTTTCTAC+TGG | - | chr4_4:63685930-63685949 | Msa0694400:intron | 35.0% |
| ! | ACTGGTTTCTTCCTATGAAA+TGG | - | chr4_4:63685948-63685967 | Msa0694400:intron | 35.0% |
| ATGGTTATATTAGAGTCTGG+AGG | - | chr4_4:63686108-63686127 | Msa0694400:intron | 35.0% | |
| AAGTATCTTGAACAAGCTTG+TGG | + | chr4_4:63686248-63686267 | None:intergenic | 35.0% | |
| !! | TCAAGATACTTCTGAAGTAC+AGG | - | chr4_4:63686257-63686276 | Msa0694400:intron | 35.0% |
| AGGCCATACTTCACATTAAT+AGG | + | chr4_4:63686367-63686386 | None:intergenic | 35.0% | |
| GAAGGAAAAATCAGCAATCT+TGG | + | chr4_4:63686440-63686459 | None:intergenic | 35.0% | |
| AGCCAGACAACTAATTCAAT+GGG | + | chr4_4:63686562-63686581 | None:intergenic | 35.0% | |
| AAGCCAGACAACTAATTCAA+TGG | + | chr4_4:63686563-63686582 | None:intergenic | 35.0% | |
| TGCCCTTAACAATACAGTAT+GGG | + | chr4_4:63686612-63686631 | None:intergenic | 35.0% | |
| TTGCCCTTAACAATACAGTA+TGG | + | chr4_4:63686613-63686632 | None:intergenic | 35.0% | |
| ATACTGTATTGTTAAGGGCA+AGG | - | chr4_4:63686612-63686631 | Msa0694400:intron | 35.0% | |
| ACAACAAACTTACACTTCCT+AGG | + | chr4_4:63686642-63686661 | None:intergenic | 35.0% | |
| ! | AAACAGCAGCAGTTTTCTTA+TGG | + | chr4_4:63686748-63686767 | None:intergenic | 35.0% |
| CAGAATATAACACAACTCCT+AGG | + | chr4_4:63687054-63687073 | None:intergenic | 35.0% | |
| ! | CTCCAACTAGGGTTTTTCTT+CGG | - | chr4_4:63684899-63684918 | Msa0694400:three_prime_UTR | 40.0% |
| !! | TTCTTCTTTGAAGCTGCAAC+TGG | + | chr4_4:63685108-63685127 | None:intergenic | 40.0% |
| ! | CGTCCAAAGCAATTTGGAAT+TGG | - | chr4_4:63685258-63685277 | Msa0694400:intron | 40.0% |
| CCTCCAATTCCAAATTGCTT+TGG | + | chr4_4:63685264-63685283 | None:intergenic | 40.0% | |
| ! | CCAAAGCAATTTGGAATTGG+AGG | - | chr4_4:63685261-63685280 | Msa0694400:intron | 40.0% |
| AATCTGGTCAAATCCCTCTT+CGG | + | chr4_4:63685297-63685316 | None:intergenic | 40.0% | |
| ATTTGACCAGATTCGTGAAG+TGG | - | chr4_4:63685304-63685323 | Msa0694400:intron | 40.0% | |
| !!! | AGAAGAGGATTTTGAAGCAG+AGG | - | chr4_4:63685352-63685371 | Msa0694400:intron | 40.0% |
| !!! | GATTTTGAAGCAGAGGTTGA+AGG | - | chr4_4:63685359-63685378 | Msa0694400:CDS | 40.0% |
| ! | TTAGTGAACTGGTTCAAAGC+TGG | + | chr4_4:63685390-63685409 | None:intergenic | 40.0% |
| ! | CTGACCTAGATTTTTGTCGA+GGG | + | chr4_4:63685415-63685434 | None:intergenic | 40.0% |
| ! | TCTGACCTAGATTTTTGTCG+AGG | + | chr4_4:63685416-63685435 | None:intergenic | 40.0% |
| TTAATACAGGATTTCGGCCT+TGG | - | chr4_4:63685538-63685557 | Msa0694400:intron | 40.0% | |
| ! | GCTTTAAGCTACAACGTGTA+TGG | + | chr4_4:63686039-63686058 | None:intergenic | 40.0% |
| !! | AGAAGGAGAGGCTTTTGAAA+AGG | - | chr4_4:63686299-63686318 | Msa0694400:intron | 40.0% |
| !! | GAAGGAGAGGCTTTTGAAAA+GGG | - | chr4_4:63686300-63686319 | Msa0694400:intron | 40.0% |
| TGAGGTAGGTAACATGATTG+AGG | + | chr4_4:63686387-63686406 | None:intergenic | 40.0% | |
| ACCCCATTGAATTAGTTGTC+TGG | - | chr4_4:63686557-63686576 | Msa0694400:intron | 40.0% | |
| GCCAGACAACTAATTCAATG+GGG | + | chr4_4:63686561-63686580 | None:intergenic | 40.0% | |
| ACAAACTTACACTTCCTAGG+CGG | + | chr4_4:63686639-63686658 | None:intergenic | 40.0% | |
| AAGACAAAATGGAGTTCAGC+AGG | - | chr4_4:63686792-63686811 | Msa0694400:CDS | 40.0% | |
| AGACAAAATGGAGTTCAGCA+GGG | - | chr4_4:63686793-63686812 | Msa0694400:CDS | 40.0% | |
| ! | ATGACAAGTATGAGGAGTAC+AGG | - | chr4_4:63686934-63686953 | Msa0694400:CDS | 40.0% |
| AATAAGCCTTTCCTTTGCCT+TGG | + | chr4_4:63687006-63687025 | None:intergenic | 40.0% | |
| AAAGGAAAGGCTTATTGCCA+AGG | - | chr4_4:63687010-63687029 | Msa0694400:intron | 40.0% | |
| ! | CTCCAACTAGGGTTTTTCTT+CGG | - | chr4_4:63684899-63684918 | Msa0694400:three_prime_UTR | 40.0% |
| !! | TTCTTCTTTGAAGCTGCAAC+TGG | + | chr4_4:63685108-63685127 | None:intergenic | 40.0% |
| ! | CGTCCAAAGCAATTTGGAAT+TGG | - | chr4_4:63685258-63685277 | Msa0694400:intron | 40.0% |
| CCTCCAATTCCAAATTGCTT+TGG | + | chr4_4:63685264-63685283 | None:intergenic | 40.0% | |
| ! | CCAAAGCAATTTGGAATTGG+AGG | - | chr4_4:63685261-63685280 | Msa0694400:intron | 40.0% |
| AATCTGGTCAAATCCCTCTT+CGG | + | chr4_4:63685297-63685316 | None:intergenic | 40.0% | |
| ATTTGACCAGATTCGTGAAG+TGG | - | chr4_4:63685304-63685323 | Msa0694400:intron | 40.0% | |
| !!! | AGAAGAGGATTTTGAAGCAG+AGG | - | chr4_4:63685352-63685371 | Msa0694400:intron | 40.0% |
| !!! | GATTTTGAAGCAGAGGTTGA+AGG | - | chr4_4:63685359-63685378 | Msa0694400:CDS | 40.0% |
| ! | TTAGTGAACTGGTTCAAAGC+TGG | + | chr4_4:63685390-63685409 | None:intergenic | 40.0% |
| ! | CTGACCTAGATTTTTGTCGA+GGG | + | chr4_4:63685415-63685434 | None:intergenic | 40.0% |
| ! | TCTGACCTAGATTTTTGTCG+AGG | + | chr4_4:63685416-63685435 | None:intergenic | 40.0% |
| TTAATACAGGATTTCGGCCT+TGG | - | chr4_4:63685538-63685557 | Msa0694400:intron | 40.0% | |
| ! | GCTTTAAGCTACAACGTGTA+TGG | + | chr4_4:63686039-63686058 | None:intergenic | 40.0% |
| !! | AGAAGGAGAGGCTTTTGAAA+AGG | - | chr4_4:63686299-63686318 | Msa0694400:intron | 40.0% |
| !! | GAAGGAGAGGCTTTTGAAAA+GGG | - | chr4_4:63686300-63686319 | Msa0694400:intron | 40.0% |
| TGAGGTAGGTAACATGATTG+AGG | + | chr4_4:63686387-63686406 | None:intergenic | 40.0% | |
| ACCCCATTGAATTAGTTGTC+TGG | - | chr4_4:63686557-63686576 | Msa0694400:intron | 40.0% | |
| GCCAGACAACTAATTCAATG+GGG | + | chr4_4:63686561-63686580 | None:intergenic | 40.0% | |
| ACAAACTTACACTTCCTAGG+CGG | + | chr4_4:63686639-63686658 | None:intergenic | 40.0% | |
| AAGACAAAATGGAGTTCAGC+AGG | - | chr4_4:63686792-63686811 | Msa0694400:CDS | 40.0% | |
| AGACAAAATGGAGTTCAGCA+GGG | - | chr4_4:63686793-63686812 | Msa0694400:CDS | 40.0% | |
| ! | ATGACAAGTATGAGGAGTAC+AGG | - | chr4_4:63686934-63686953 | Msa0694400:CDS | 40.0% |
| AATAAGCCTTTCCTTTGCCT+TGG | + | chr4_4:63687006-63687025 | None:intergenic | 40.0% | |
| AAAGGAAAGGCTTATTGCCA+AGG | - | chr4_4:63687010-63687029 | Msa0694400:intron | 40.0% | |
| CTCCGAAGAAAAACCCTAGT+TGG | + | chr4_4:63684904-63684923 | None:intergenic | 45.0% | |
| GAATTGACGCGGTTACTTAC+AGG | + | chr4_4:63685132-63685151 | None:intergenic | 45.0% | |
| TTTGGACGCTTCTCAAACAG+CGG | + | chr4_4:63685246-63685265 | None:intergenic | 45.0% | |
| !! | GAGAAGCGTCCAAAGCAATT+TGG | - | chr4_4:63685252-63685271 | Msa0694400:intron | 45.0% |
| !! | TGTCGAGGGTTTTAGTGAAC+TGG | + | chr4_4:63685401-63685420 | None:intergenic | 45.0% |
| TGCATGTGCTGCATAAATGC+TGG | - | chr4_4:63685891-63685910 | Msa0694400:CDS | 45.0% | |
| ATGAGCAATCACGACAAGCT+GGG | + | chr4_4:63686530-63686549 | None:intergenic | 45.0% | |
| GATTTCCATCTTCCTGCACA+AGG | + | chr4_4:63686590-63686609 | None:intergenic | 45.0% | |
| CAAACTTACACTTCCTAGGC+GGG | + | chr4_4:63686638-63686657 | None:intergenic | 45.0% | |
| ! | ATGAGGAGTACAGGAAGAAG+TGG | - | chr4_4:63686943-63686962 | Msa0694400:intron | 45.0% |
| ! | TGAGGAGTACAGGAAGAAGT+GGG | - | chr4_4:63686944-63686963 | Msa0694400:intron | 45.0% |
| CAACTCCTAGGTCATTCTCT+GGG | + | chr4_4:63687042-63687061 | None:intergenic | 45.0% | |
| ACAACTCCTAGGTCATTCTC+TGG | + | chr4_4:63687043-63687062 | None:intergenic | 45.0% | |
| ! | TACCTCTGGCGACAGAATTT+TGG | - | chr4_4:63687225-63687244 | Msa0694400:CDS | 45.0% |
| TACCAAAATTCTGTCGCCAG+AGG | + | chr4_4:63687230-63687249 | None:intergenic | 45.0% | |
| CTCCGAAGAAAAACCCTAGT+TGG | + | chr4_4:63684904-63684923 | None:intergenic | 45.0% | |
| GAATTGACGCGGTTACTTAC+AGG | + | chr4_4:63685132-63685151 | None:intergenic | 45.0% | |
| TTTGGACGCTTCTCAAACAG+CGG | + | chr4_4:63685246-63685265 | None:intergenic | 45.0% | |
| !! | GAGAAGCGTCCAAAGCAATT+TGG | - | chr4_4:63685252-63685271 | Msa0694400:intron | 45.0% |
| !! | TGTCGAGGGTTTTAGTGAAC+TGG | + | chr4_4:63685401-63685420 | None:intergenic | 45.0% |
| TGCATGTGCTGCATAAATGC+TGG | - | chr4_4:63685891-63685910 | Msa0694400:CDS | 45.0% | |
| ATGAGCAATCACGACAAGCT+GGG | + | chr4_4:63686530-63686549 | None:intergenic | 45.0% | |
| GATTTCCATCTTCCTGCACA+AGG | + | chr4_4:63686590-63686609 | None:intergenic | 45.0% | |
| CAAACTTACACTTCCTAGGC+GGG | + | chr4_4:63686638-63686657 | None:intergenic | 45.0% | |
| ! | ATGAGGAGTACAGGAAGAAG+TGG | - | chr4_4:63686943-63686962 | Msa0694400:intron | 45.0% |
| ! | TGAGGAGTACAGGAAGAAGT+GGG | - | chr4_4:63686944-63686963 | Msa0694400:intron | 45.0% |
| CAACTCCTAGGTCATTCTCT+GGG | + | chr4_4:63687042-63687061 | None:intergenic | 45.0% | |
| ACAACTCCTAGGTCATTCTC+TGG | + | chr4_4:63687043-63687062 | None:intergenic | 45.0% | |
| ! | TACCTCTGGCGACAGAATTT+TGG | - | chr4_4:63687225-63687244 | Msa0694400:CDS | 45.0% |
| TACCAAAATTCTGTCGCCAG+AGG | + | chr4_4:63687230-63687249 | None:intergenic | 45.0% | |
| GCTAATGCTCTGTGTCTGTG+CGG | + | chr4_4:63684938-63684957 | None:intergenic | 50.0% | |
| AGCATTAGCACCAGCAGCAA+TGG | - | chr4_4:63684949-63684968 | Msa0694400:three_prime_UTR | 50.0% | |
| AGTATACGCACCATTGCTGC+TGG | + | chr4_4:63684962-63684981 | None:intergenic | 50.0% | |
| TTGGACGCTTCTCAAACAGC+GGG | + | chr4_4:63685245-63685264 | None:intergenic | 50.0% | |
| CTCTGCACCTGAACGTTCTT+CGG | + | chr4_4:63685330-63685349 | None:intergenic | 50.0% | |
| TTCAGGTGCAGAGGAAGAAG+AGG | - | chr4_4:63685337-63685356 | Msa0694400:intron | 50.0% | |
| ! | GTGAACTGGTTCAAAGCTGG+TGG | + | chr4_4:63685387-63685406 | None:intergenic | 50.0% |
| !! | ACTTCTGAAGTACAGGCCTG+AGG | - | chr4_4:63686264-63686283 | Msa0694400:intron | 50.0% |
| ! | TTCTTCTCAGCCTTGTCCTC+AGG | + | chr4_4:63686283-63686302 | None:intergenic | 50.0% |
| TGAGGACAAGGCTGAGAAGA+AGG | - | chr4_4:63686282-63686301 | Msa0694400:intron | 50.0% | |
| ACAAGGCTGAGAAGAAGGAG+AGG | - | chr4_4:63686287-63686306 | Msa0694400:intron | 50.0% | |
| !! | GAGGCTTTTGAAAAGGGCTC+AGG | - | chr4_4:63686306-63686325 | Msa0694400:intron | 50.0% |
| TTTGAAAAGGGCTCAGGCAG+AGG | - | chr4_4:63686312-63686331 | Msa0694400:intron | 50.0% | |
| TGTTACCTACCTCATCGAGC+AGG | - | chr4_4:63686393-63686412 | Msa0694400:intron | 50.0% | |
| GAAAGACAACCTGCTCGATG+AGG | + | chr4_4:63686405-63686424 | None:intergenic | 50.0% | |
| CATGAGCAATCACGACAAGC+TGG | + | chr4_4:63686531-63686550 | None:intergenic | 50.0% | |
| ATGCCACCTTAATCGCCTCT+AGG | + | chr4_4:63686820-63686839 | None:intergenic | 50.0% | |
| ! | GAGGAGTACAGGAAGAAGTG+GGG | - | chr4_4:63686945-63686964 | Msa0694400:intron | 50.0% |
| !! | AAGTGGGGTGGTGGAATCAT+GGG | - | chr4_4:63686960-63686979 | Msa0694400:intron | 50.0% |
| !! | CTTGGTCTTGGCTTGGGATT+TGG | + | chr4_4:63686988-63687007 | None:intergenic | 50.0% |
| CAAATCCCAAGCCAAGACCA+AGG | - | chr4_4:63686986-63687005 | Msa0694400:intron | 50.0% | |
| !! | CTTTGCCTTGGTCTTGGCTT+GGG | + | chr4_4:63686994-63687013 | None:intergenic | 50.0% |
| CCTTTCCTTTGCCTTGGTCT+TGG | + | chr4_4:63687000-63687019 | None:intergenic | 50.0% | |
| CCAAGACCAAGGCAAAGGAA+AGG | - | chr4_4:63686997-63687016 | Msa0694400:intron | 50.0% | |
| GGAAAGGCTTATTGCCAAGG+AGG | - | chr4_4:63687013-63687032 | Msa0694400:intron | 50.0% | |
| GCTAATGCTCTGTGTCTGTG+CGG | + | chr4_4:63684938-63684957 | None:intergenic | 50.0% | |
| AGCATTAGCACCAGCAGCAA+TGG | - | chr4_4:63684949-63684968 | Msa0694400:three_prime_UTR | 50.0% | |
| AGTATACGCACCATTGCTGC+TGG | + | chr4_4:63684962-63684981 | None:intergenic | 50.0% | |
| TTGGACGCTTCTCAAACAGC+GGG | + | chr4_4:63685245-63685264 | None:intergenic | 50.0% | |
| CTCTGCACCTGAACGTTCTT+CGG | + | chr4_4:63685330-63685349 | None:intergenic | 50.0% | |
| TTCAGGTGCAGAGGAAGAAG+AGG | - | chr4_4:63685337-63685356 | Msa0694400:intron | 50.0% | |
| ! | GTGAACTGGTTCAAAGCTGG+TGG | + | chr4_4:63685387-63685406 | None:intergenic | 50.0% |
| !! | ACTTCTGAAGTACAGGCCTG+AGG | - | chr4_4:63686264-63686283 | Msa0694400:intron | 50.0% |
| ! | TTCTTCTCAGCCTTGTCCTC+AGG | + | chr4_4:63686283-63686302 | None:intergenic | 50.0% |
| TGAGGACAAGGCTGAGAAGA+AGG | - | chr4_4:63686282-63686301 | Msa0694400:intron | 50.0% | |
| ACAAGGCTGAGAAGAAGGAG+AGG | - | chr4_4:63686287-63686306 | Msa0694400:intron | 50.0% | |
| !! | GAGGCTTTTGAAAAGGGCTC+AGG | - | chr4_4:63686306-63686325 | Msa0694400:intron | 50.0% |
| TTTGAAAAGGGCTCAGGCAG+AGG | - | chr4_4:63686312-63686331 | Msa0694400:intron | 50.0% | |
| TGTTACCTACCTCATCGAGC+AGG | - | chr4_4:63686393-63686412 | Msa0694400:intron | 50.0% | |
| GAAAGACAACCTGCTCGATG+AGG | + | chr4_4:63686405-63686424 | None:intergenic | 50.0% | |
| CATGAGCAATCACGACAAGC+TGG | + | chr4_4:63686531-63686550 | None:intergenic | 50.0% | |
| ATGCCACCTTAATCGCCTCT+AGG | + | chr4_4:63686820-63686839 | None:intergenic | 50.0% | |
| ! | GAGGAGTACAGGAAGAAGTG+GGG | - | chr4_4:63686945-63686964 | Msa0694400:intron | 50.0% |
| !! | AAGTGGGGTGGTGGAATCAT+GGG | - | chr4_4:63686960-63686979 | Msa0694400:intron | 50.0% |
| !! | CTTGGTCTTGGCTTGGGATT+TGG | + | chr4_4:63686988-63687007 | None:intergenic | 50.0% |
| CAAATCCCAAGCCAAGACCA+AGG | - | chr4_4:63686986-63687005 | Msa0694400:intron | 50.0% | |
| !! | CTTTGCCTTGGTCTTGGCTT+GGG | + | chr4_4:63686994-63687013 | None:intergenic | 50.0% |
| CCTTTCCTTTGCCTTGGTCT+TGG | + | chr4_4:63687000-63687019 | None:intergenic | 50.0% | |
| CCAAGACCAAGGCAAAGGAA+AGG | - | chr4_4:63686997-63687016 | Msa0694400:intron | 50.0% | |
| GGAAAGGCTTATTGCCAAGG+AGG | - | chr4_4:63687013-63687032 | Msa0694400:intron | 50.0% | |
| ACGCTTCTCAAACAGCGGGT+TGG | + | chr4_4:63685241-63685260 | None:intergenic | 55.0% | |
| AGGTGCATTGCCACCGAAGA+GGG | - | chr4_4:63685281-63685300 | Msa0694400:intron | 55.0% | |
| CTGGTCAAATCCCTCTTCGG+TGG | + | chr4_4:63685294-63685313 | None:intergenic | 55.0% | |
| CTTCGGCCACTTCACGAATC+TGG | + | chr4_4:63685313-63685332 | None:intergenic | 55.0% | |
| GAAGTGGCCGAAGAACGTTC+AGG | - | chr4_4:63685320-63685339 | Msa0694400:intron | 55.0% | |
| CGAAGAACGTTCAGGTGCAG+AGG | - | chr4_4:63685328-63685347 | Msa0694400:intron | 55.0% | |
| GAACAAGCTTGTGGCTGCAG+AGG | + | chr4_4:63686239-63686258 | None:intergenic | 55.0% | |
| GAAGTACAGGCCTGAGGACA+AGG | - | chr4_4:63686270-63686289 | Msa0694400:intron | 55.0% | |
| GACAACCTGCTCGATGAGGT+AGG | + | chr4_4:63686401-63686420 | None:intergenic | 55.0% | |
| ! | TCCAGCCTTGTGCAGGAAGA+TGG | - | chr4_4:63686582-63686601 | Msa0694400:intron | 55.0% |
| TCCATCTTCCTGCACAAGGC+TGG | + | chr4_4:63686586-63686605 | None:intergenic | 55.0% | |
| CAGGGTCCTAGAGGCGATTA+AGG | - | chr4_4:63686811-63686830 | Msa0694400:CDS | 55.0% | |
| GGTCCTAGAGGCGATTAAGG+TGG | - | chr4_4:63686814-63686833 | Msa0694400:CDS | 55.0% | |
| GAGTACAGGAAGAAGTGGGG+TGG | - | chr4_4:63686948-63686967 | Msa0694400:intron | 55.0% | |
| TACAGGAAGAAGTGGGGTGG+TGG | - | chr4_4:63686951-63686970 | Msa0694400:intron | 55.0% | |
| !! | GAAGTGGGGTGGTGGAATCA+TGG | - | chr4_4:63686959-63686978 | Msa0694400:intron | 55.0% |
| !! | CCTTTGCCTTGGTCTTGGCT+TGG | + | chr4_4:63686995-63687014 | None:intergenic | 55.0% |
| CCAAGCCAAGACCAAGGCAA+AGG | - | chr4_4:63686992-63687011 | Msa0694400:intron | 55.0% | |
| ACGCTTCTCAAACAGCGGGT+TGG | + | chr4_4:63685241-63685260 | None:intergenic | 55.0% | |
| AGGTGCATTGCCACCGAAGA+GGG | - | chr4_4:63685281-63685300 | Msa0694400:intron | 55.0% | |
| CTGGTCAAATCCCTCTTCGG+TGG | + | chr4_4:63685294-63685313 | None:intergenic | 55.0% | |
| CTTCGGCCACTTCACGAATC+TGG | + | chr4_4:63685313-63685332 | None:intergenic | 55.0% | |
| GAAGTGGCCGAAGAACGTTC+AGG | - | chr4_4:63685320-63685339 | Msa0694400:intron | 55.0% | |
| CGAAGAACGTTCAGGTGCAG+AGG | - | chr4_4:63685328-63685347 | Msa0694400:intron | 55.0% | |
| GAACAAGCTTGTGGCTGCAG+AGG | + | chr4_4:63686239-63686258 | None:intergenic | 55.0% | |
| GAAGTACAGGCCTGAGGACA+AGG | - | chr4_4:63686270-63686289 | Msa0694400:intron | 55.0% | |
| GACAACCTGCTCGATGAGGT+AGG | + | chr4_4:63686401-63686420 | None:intergenic | 55.0% | |
| ! | TCCAGCCTTGTGCAGGAAGA+TGG | - | chr4_4:63686582-63686601 | Msa0694400:intron | 55.0% |
| TCCATCTTCCTGCACAAGGC+TGG | + | chr4_4:63686586-63686605 | None:intergenic | 55.0% | |
| CAGGGTCCTAGAGGCGATTA+AGG | - | chr4_4:63686811-63686830 | Msa0694400:CDS | 55.0% | |
| GGTCCTAGAGGCGATTAAGG+TGG | - | chr4_4:63686814-63686833 | Msa0694400:CDS | 55.0% | |
| GAGTACAGGAAGAAGTGGGG+TGG | - | chr4_4:63686948-63686967 | Msa0694400:intron | 55.0% | |
| TACAGGAAGAAGTGGGGTGG+TGG | - | chr4_4:63686951-63686970 | Msa0694400:intron | 55.0% | |
| !! | GAAGTGGGGTGGTGGAATCA+TGG | - | chr4_4:63686959-63686978 | Msa0694400:intron | 55.0% |
| !! | CCTTTGCCTTGGTCTTGGCT+TGG | + | chr4_4:63686995-63687014 | None:intergenic | 55.0% |
| CCAAGCCAAGACCAAGGCAA+AGG | - | chr4_4:63686992-63687011 | Msa0694400:intron | 55.0% | |
| GAGGTGCATTGCCACCGAAG+AGG | - | chr4_4:63685280-63685299 | Msa0694400:intron | 60.0% | |
| ! | TCTGGCTTCCAGCCTTGTGC+AGG | - | chr4_4:63686575-63686594 | Msa0694400:intron | 60.0% |
| GGAGTTCAGCAGGGTCCTAG+AGG | - | chr4_4:63686802-63686821 | Msa0694400:CDS | 60.0% | |
| CATTCTCTGGGCAGCCTCCT+TGG | + | chr4_4:63687030-63687049 | None:intergenic | 60.0% | |
| GGCTGCCCAGAGAATGACCT+AGG | - | chr4_4:63687034-63687053 | Msa0694400:intron | 60.0% | |
| GAGGTGCATTGCCACCGAAG+AGG | - | chr4_4:63685280-63685299 | Msa0694400:intron | 60.0% | |
| ! | TCTGGCTTCCAGCCTTGTGC+AGG | - | chr4_4:63686575-63686594 | Msa0694400:intron | 60.0% |
| GGAGTTCAGCAGGGTCCTAG+AGG | - | chr4_4:63686802-63686821 | Msa0694400:CDS | 60.0% | |
| CATTCTCTGGGCAGCCTCCT+TGG | + | chr4_4:63687030-63687049 | None:intergenic | 60.0% | |
| GGCTGCCCAGAGAATGACCT+AGG | - | chr4_4:63687034-63687053 | Msa0694400:intron | 60.0% | |
| AAGGGCTCAGGCAGAGGCTG+AGG | - | chr4_4:63686318-63686337 | Msa0694400:intron | 65.0% | |
| AGGGCTCAGGCAGAGGCTGA+GGG | - | chr4_4:63686319-63686338 | Msa0694400:intron | 65.0% | |
| GTTAAGGGCAAGGCCCGCCT+AGG | - | chr4_4:63686622-63686641 | Msa0694400:intron | 65.0% | |
| AAGGGCTCAGGCAGAGGCTG+AGG | - | chr4_4:63686318-63686337 | Msa0694400:intron | 65.0% | |
| AGGGCTCAGGCAGAGGCTGA+GGG | - | chr4_4:63686319-63686338 | Msa0694400:intron | 65.0% | |
| GTTAAGGGCAAGGCCCGCCT+AGG | - | chr4_4:63686622-63686641 | Msa0694400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 63684893 | 63687294 | 63684893 | ID=Msa0694400;Name=Msa0694400 |
| chr4_4 | mRNA | 63684893 | 63687294 | 63684893 | ID=Msa0694400-mRNA-1;Parent=Msa0694400;Name=Msa0694400-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|1|0.85|1|1|1|7|239|284 |
| chr4_4 | exon | 63684893 | 63685263 | 63684893 | ID=Msa0694400-mRNA-1:exon:18010;Parent=Msa0694400-mRNA-1 |
| chr4_4 | exon | 63685355 | 63685447 | 63685355 | ID=Msa0694400-mRNA-1:exon:18009;Parent=Msa0694400-mRNA-1 |
| chr4_4 | exon | 63685539 | 63685667 | 63685539 | ID=Msa0694400-mRNA-1:exon:18008;Parent=Msa0694400-mRNA-1 |
| chr4_4 | exon | 63685773 | 63685942 | 63685773 | ID=Msa0694400-mRNA-1:exon:18007;Parent=Msa0694400-mRNA-1 |
| chr4_4 | exon | 63686758 | 63686959 | 63686758 | ID=Msa0694400-mRNA-1:exon:18006;Parent=Msa0694400-mRNA-1 |
| chr4_4 | exon | 63687056 | 63687106 | 63687056 | ID=Msa0694400-mRNA-1:exon:18005;Parent=Msa0694400-mRNA-1 |
| chr4_4 | exon | 63687217 | 63687294 | 63687217 | ID=Msa0694400-mRNA-1:exon:18004;Parent=Msa0694400-mRNA-1 |
| chr4_4 | CDS | 63687217 | 63687294 | 63687217 | ID=Msa0694400-mRNA-1:cds;Parent=Msa0694400-mRNA-1 |
| chr4_4 | CDS | 63687056 | 63687106 | 63687056 | ID=Msa0694400-mRNA-1:cds;Parent=Msa0694400-mRNA-1 |
| chr4_4 | CDS | 63686758 | 63686959 | 63686758 | ID=Msa0694400-mRNA-1:cds;Parent=Msa0694400-mRNA-1 |
| chr4_4 | CDS | 63685773 | 63685942 | 63685773 | ID=Msa0694400-mRNA-1:cds;Parent=Msa0694400-mRNA-1 |
| chr4_4 | CDS | 63685539 | 63685667 | 63685539 | ID=Msa0694400-mRNA-1:cds;Parent=Msa0694400-mRNA-1 |
| chr4_4 | CDS | 63685355 | 63685447 | 63685355 | ID=Msa0694400-mRNA-1:cds;Parent=Msa0694400-mRNA-1 |
| chr4_4 | CDS | 63685132 | 63685263 | 63685132 | ID=Msa0694400-mRNA-1:cds;Parent=Msa0694400-mRNA-1 |
| chr4_4 | three_prime_UTR | 63684893 | 63685131 | 63684893 | ID=Msa0694400-mRNA-1:three_prime_utr;Parent=Msa0694400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
