Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482560 | XP_003598026.1 | 96.954 | 197 | 6 | 0 | 32 | 228 | 1 | 197 | 9.55e-138 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482560 | sp|Q9FLF0|RS92_ARATH | 88.770 | 187 | 21 | 0 | 32 | 218 | 1 | 187 | 2.55e-120 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482560 | B7FMD4 | 96.954 | 197 | 6 | 0 | 32 | 228 | 1 | 197 | 4.56e-138 | 394 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003330 | Msa0482560 | 0.822427 | 2.383231e-53 | -8.615850e-47 |
| Msa0027590 | Msa0482560 | 0.806414 | 8.322605e-50 | -8.615850e-47 |
| Msa0040220 | Msa0482560 | 0.843295 | 1.530291e-58 | -8.615850e-47 |
| Msa0042510 | Msa0482560 | 0.826679 | 2.377080e-54 | -8.615850e-47 |
| Msa0079560 | Msa0482560 | 0.828655 | 7.969466e-55 | -8.615850e-47 |
| Msa0086160 | Msa0482560 | 0.820593 | 6.319931e-53 | -8.615850e-47 |
| Msa0087910 | Msa0482560 | 0.831362 | 1.742222e-55 | -8.615850e-47 |
| Msa0110630 | Msa0482560 | 0.815621 | 8.418814e-52 | -8.615850e-47 |
| Msa0116600 | Msa0482560 | 0.839182 | 1.845928e-57 | -8.615850e-47 |
| Msa0116690 | Msa0482560 | 0.825759 | 3.933301e-54 | -8.615850e-47 |
| Msa0127230 | Msa0482560 | 0.820514 | 6.590670e-53 | -8.615850e-47 |
| Msa0128330 | Msa0482560 | 0.861932 | 7.245924e-64 | -8.615850e-47 |
| Msa0134580 | Msa0482560 | 0.801408 | 9.134128e-49 | -8.615850e-47 |
| Msa0167860 | Msa0482560 | 0.831563 | 1.555264e-55 | -8.615850e-47 |
| Msa0174580 | Msa0482560 | 0.862733 | 4.111312e-64 | -8.615850e-47 |
| Msa0182050 | Msa0482560 | 0.805675 | 1.190700e-49 | -8.615850e-47 |
| Msa0191550 | Msa0482560 | 0.807590 | 4.692237e-50 | -8.615850e-47 |
| Msa0192300 | Msa0482560 | 0.882285 | 1.184351e-70 | -8.615850e-47 |
| Msa0194940 | Msa0482560 | 0.812464 | 4.183695e-51 | -8.615850e-47 |
| Msa0216200 | Msa0482560 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0377370 | Msa0482560 | 0.816979 | 4.181325e-52 | -8.615850e-47 |
| Msa0426090 | Msa0482560 | 0.842490 | 2.505317e-58 | -8.615850e-47 |
| Msa0426250 | Msa0482560 | 0.859390 | 4.274347e-63 | -8.615850e-47 |
| Msa0450150 | Msa0482560 | 0.807364 | 5.241761e-50 | -8.615850e-47 |
| Msa0472480 | Msa0482560 | 0.836575 | 8.633525e-57 | -8.615850e-47 |
| Msa0475810 | Msa0482560 | 0.815969 | 7.038248e-52 | -8.615850e-47 |
| Msa0481520 | Msa0482560 | 0.807298 | 5.412029e-50 | -8.615850e-47 |
| Msa0482560 | Msa0547920 | 0.808801 | 2.591239e-50 | -8.615850e-47 |
| Msa0482560 | Msa0563540 | 0.810409 | 1.169213e-50 | -8.615850e-47 |
| Msa0482560 | Msa0573550 | 0.863542 | 2.311864e-64 | -8.615850e-47 |
| Msa0482560 | Msa0574780 | 0.807702 | 4.441962e-50 | -8.615850e-47 |
| Msa0482560 | Msa0578010 | 0.821938 | 3.093925e-53 | -8.615850e-47 |
| Msa0482560 | Msa0589160 | 0.819140 | 1.357757e-52 | -8.615850e-47 |
| Msa0482560 | Msa0597240 | 0.856524 | 3.035551e-62 | -8.615850e-47 |
| Msa0482560 | Msa0602900 | 0.814944 | 1.190092e-51 | -8.615850e-47 |
| Msa0482560 | Msa0605890 | 0.804521 | 2.075835e-49 | -8.615850e-47 |
| Msa0482560 | Msa0619230 | 0.835846 | 1.322750e-56 | -8.615850e-47 |
| Msa0482560 | Msa0629280 | 0.807913 | 4.006122e-50 | -8.615850e-47 |
| Msa0482560 | Msa0643960 | 0.806842 | 6.758634e-50 | -8.615850e-47 |
| Msa0482560 | Msa0653060 | 0.818809 | 1.614394e-52 | -8.615850e-47 |
| Msa0482560 | Msa0656450 | 0.814609 | 1.411944e-51 | -8.615850e-47 |
| Msa0482560 | Msa0667110 | 0.803301 | 3.720935e-49 | -8.615850e-47 |
| Msa0482560 | Msa0694400 | 0.880382 | 5.748976e-70 | -8.615850e-47 |
| Msa0482560 | Msa0708630 | 0.800860 | 1.182270e-48 | -8.615850e-47 |
| Msa0482560 | Msa0718560 | 0.802442 | 5.600561e-49 | -8.615850e-47 |
| Msa0482560 | Msa0758420 | 0.818170 | 2.254440e-52 | -8.615850e-47 |
| Msa0482560 | Msa0788380 | 0.840810 | 6.949490e-58 | -8.615850e-47 |
| Msa0482560 | Msa0790450 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0482560 | Msa0835190 | 0.820687 | 6.011922e-53 | -8.615850e-47 |
| Msa0482560 | Msa0838070 | 0.820705 | 5.956093e-53 | -8.615850e-47 |
| Msa0482560 | Msa0902730 | 0.809420 | 1.908851e-50 | -8.615850e-47 |
| Msa0482560 | Msa0929700 | 0.832370 | 9.826419e-56 | -8.615850e-47 |
| Msa0482560 | Msa0930100 | 0.832253 | 1.050491e-55 | -8.615850e-47 |
| Msa0482560 | Msa0930360 | 0.835253 | 1.868686e-56 | -8.615850e-47 |
| Msa0482560 | Msa0930790 | 0.819707 | 1.008058e-52 | -8.615850e-47 |
| Msa0482560 | Msa1040160 | 0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa0482560 | Msa1041680 | 0.823139 | 1.626295e-53 | -8.615850e-47 |
| Msa0482560 | Msa1082050 | 0.804444 | 2.153827e-49 | -8.615850e-47 |
| Msa0482560 | Msa1083370 | 0.813585 | 2.375660e-51 | -8.615850e-47 |
| Msa0482560 | Msa1093500 | 0.802748 | 4.842984e-49 | -8.615850e-47 |
| Msa0482560 | Msa1126690 | 0.838700 | 2.460791e-57 | -8.615850e-47 |
| Msa0482560 | Msa1166570 | 0.825308 | 5.030831e-54 | -8.615850e-47 |
| Msa0482560 | Msa1180000 | 0.852696 | 3.895772e-61 | -8.615850e-47 |
| Msa0482560 | Msa1208330 | 0.815158 | 1.066736e-51 | -8.615850e-47 |
| Msa0482560 | Msa1237040 | 0.873531 | 1.368491e-67 | -8.615850e-47 |
| Msa0482560 | Msa1255830 | 0.800161 | 1.641221e-48 | -8.615850e-47 |
| Msa0482560 | Msa1255850 | 0.801991 | 6.934225e-49 | -8.615850e-47 |
| Msa0482560 | Msa1258540 | 0.864589 | 1.090320e-64 | -8.615850e-47 |
| Msa0482560 | Msa1270640 | 0.839153 | 1.878125e-57 | -8.615850e-47 |
| Msa0482560 | Msa1270710 | 0.845990 | 2.876757e-59 | -8.615850e-47 |
| Msa0482560 | Msa1278130 | 0.842356 | 2.718069e-58 | -8.615850e-47 |
| Msa0482560 | Msa1284060 | 0.803401 | 3.547579e-49 | -8.615850e-47 |
| Msa0482560 | Msa1317390 | 0.863029 | 3.331566e-64 | -8.615850e-47 |
| Msa0482560 | Msa1351020 | 0.810478 | 1.129855e-50 | -8.615850e-47 |
| Msa0482560 | Msa1385480 | 0.873407 | 1.506167e-67 | -8.615850e-47 |
| Msa0482560 | Msa1387750 | 0.800302 | 1.536272e-48 | -8.615850e-47 |
| Msa0482560 | Msa1390760 | 0.834087 | 3.671324e-56 | -8.615850e-47 |
| Msa0482560 | Msa1407550 | 0.814414 | 1.559575e-51 | -8.615850e-47 |
| Msa0482560 | Msa1413570 | 0.816439 | 5.526603e-52 | -8.615850e-47 |
| Msa0482560 | Msa1432310 | 0.824784 | 6.689319e-54 | -8.615850e-47 |
| Msa0482560 | Msa1450560 | 0.807245 | 5.553532e-50 | -8.615850e-47 |
| Msa0482560 | Msa1463570 | 0.859899 | 3.004544e-63 | -8.615850e-47 |
| Msa0270160 | Msa0482560 | 0.822173 | 2.728514e-53 | -8.615850e-47 |
| Msa0277600 | Msa0482560 | 0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0301250 | Msa0482560 | 0.879773 | 9.472138e-70 | -8.615850e-47 |
| Msa0313060 | Msa0482560 | 0.871996 | 4.461969e-67 | -8.615850e-47 |
| Msa0315430 | Msa0482560 | 0.844754 | 6.213934e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482560 | MtrunA17_Chr3g0077371 | 96.954 | 197 | 6 | 0 | 32 | 228 | 1 | 197 | 8.79e-142 | 394 |
| Msa0482560 | MtrunA17_Chr3g0077391 | 96.954 | 197 | 6 | 0 | 32 | 228 | 1 | 197 | 8.79e-142 | 394 |
| Msa0482560 | MtrunA17_Chr4g0009481 | 96.954 | 197 | 6 | 0 | 32 | 228 | 1 | 197 | 8.79e-142 | 394 |
| Msa0482560 | MtrunA17_Chr7g0241891 | 95.722 | 187 | 8 | 0 | 32 | 218 | 1 | 187 | 1.49e-125 | 353 |
| Msa0482560 | MtrunA17_Chr1g0182531 | 86.275 | 204 | 22 | 2 | 13 | 210 | 3 | 206 | 8.62e-125 | 352 |
| Msa0482560 | MtrunA17_Chr4g0060551 | 93.043 | 115 | 8 | 0 | 32 | 146 | 1 | 115 | 3.65e-75 | 223 |
| Msa0482560 | MtrunA17_Chr4g0009501 | 100.000 | 60 | 0 | 0 | 169 | 228 | 13 | 72 | 1.73e-37 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482560 | AT5G39850.1 | 88.770 | 187 | 21 | 0 | 32 | 218 | 1 | 187 | 2.59e-121 | 343 |
| Msa0482560 | AT5G15200.1 | 83.333 | 198 | 32 | 1 | 32 | 228 | 1 | 198 | 6.41e-115 | 327 |
| Msa0482560 | AT5G15200.2 | 87.591 | 137 | 17 | 0 | 32 | 168 | 1 | 137 | 9.85e-84 | 246 |
Find 66 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCTGTTTGCCTGCCTACT+AGG | 0.239302 | 3_3:-89506751 | None:intergenic |
| CCATTTGGTGGTGGTCTTCC+TGG | 0.249116 | 3_3:+89507706 | Msa0482560:CDS |
| ATCACCACCAGAAGCCTTCT+TGG | 0.255696 | 3_3:-89507761 | None:intergenic |
| TTCCCATAGTTTCGGTAAAC+TGG | 0.287392 | 3_3:-89506805 | None:intergenic |
| CAGACTCTTGTCTTCAAATC+TGG | 0.288805 | 3_3:+89507126 | Msa0482560:CDS |
| ATTCCAGTTTACCGAAACTA+TGG | 0.305962 | 3_3:+89506802 | Msa0482560:CDS |
| TTGAAGCTGGTCGGAGAGTA+TGG | 0.314070 | 3_3:+89506880 | Msa0482560:CDS |
| CCTTCTTGGCTGCAGCCTTA+AGG | 0.354248 | 3_3:-89507747 | None:intergenic |
| ACCATGCTAGGGTTCTTATC+AGG | 0.369101 | 3_3:+89507166 | Msa0482560:CDS |
| GCTGCAGCCAAGAAGGCTTC+TGG | 0.408125 | 3_3:+89507754 | Msa0482560:CDS |
| TGGACGACGTGGCTTCTTGA+AGG | 0.409761 | 3_3:-89506830 | None:intergenic |
| TCCATACGAGAAGGAGCGTT+TGG | 0.432310 | 3_3:+89506849 | Msa0482560:CDS |
| TCTTCTCATCCAATGTCAAA+AGG | 0.436967 | 3_3:-89506972 | None:intergenic |
| TTATCAGGCAGAGACACATT+AGG | 0.445935 | 3_3:+89507181 | Msa0482560:CDS |
| CCTAGCATGGTGAATGGACT+TGG | 0.448468 | 3_3:-89507154 | None:intergenic |
| CATTGTTACGGATACGGCTC+AGG | 0.451453 | 3_3:-89506942 | None:intergenic |
| TTCTTTCGCTTCACGCGACC+AGG | 0.452567 | 3_3:-89507724 | None:intergenic |
| TTCTAGCATTGTTACGGATA+CGG | 0.467109 | 3_3:-89506948 | None:intergenic |
| AAAGGGTTCTAGCATTGTTA+CGG | 0.475438 | 3_3:-89506954 | None:intergenic |
| AGTGAACATCCCATCCTTCA+TGG | 0.476720 | 3_3:+89507639 | Msa0482560:CDS |
| TCCCTCACTAGTCCATTTGG+TGG | 0.477112 | 3_3:+89507694 | Msa0482560:CDS |
| GAACCCTCGTCGGATCTTTG+AGG | 0.484508 | 3_3:+89506993 | Msa0482560:CDS |
| CTCACTAGTCCATTTGGTGG+TGG | 0.488219 | 3_3:+89507697 | Msa0482560:CDS |
| AAGAAGGCTTCTGGTGGTGA+TGG | 0.495137 | 3_3:+89507763 | Msa0482560:CDS |
| AACCCTCGTCGGATCTTTGA+GGG | 0.508041 | 3_3:+89506994 | Msa0482560:CDS |
| CCAGGAAGACCACCACCAAA+TGG | 0.509846 | 3_3:-89507706 | None:intergenic |
| CTTCTCATCCAATGTCAAAA+GGG | 0.512873 | 3_3:-89506971 | None:intergenic |
| CCTTAAGGCTGCAGCCAAGA+AGG | 0.517095 | 3_3:+89507747 | Msa0482560:CDS |
| TCCAAACGCTCCTTCTCGTA+TGG | 0.519540 | 3_3:-89506850 | None:intergenic |
| CCAAGTCCATTCACCATGCT+AGG | 0.525789 | 3_3:+89507154 | Msa0482560:CDS |
| GTTTCGGTAAACTGGAATGT+GGG | 0.529716 | 3_3:-89506797 | None:intergenic |
| TCAACCCTCACCATGAAGGA+TGG | 0.531047 | 3_3:-89507649 | None:intergenic |
| AAGAACCCTAGCATGGTGAA+TGG | 0.539163 | 3_3:-89507160 | None:intergenic |
| CGTGAAGCGAAAGAACCTTA+AGG | 0.541128 | 3_3:+89507732 | Msa0482560:CDS |
| TGGTCGGAGAGTATGGTCTT+CGG | 0.541482 | 3_3:+89506887 | Msa0482560:CDS |
| TTCCAGTTTACCGAAACTAT+GGG | 0.556730 | 3_3:+89506803 | Msa0482560:CDS |
| TTGAGGAGAATGTTTAAGCA+TGG | 0.560766 | 3_3:+89507027 | Msa0482560:CDS |
| CAACCCTCACCATGAAGGAT+GGG | 0.569875 | 3_3:-89507648 | None:intergenic |
| TGAATCAACCCTCACCATGA+AGG | 0.571223 | 3_3:-89507653 | None:intergenic |
| GAACAAGCTCGATTATGTGT+TGG | 0.578338 | 3_3:+89507068 | Msa0482560:CDS |
| TTTGGATGCTGAGTTGAAGC+TGG | 0.579570 | 3_3:+89506867 | Msa0482560:CDS |
| GGTGTAAGAGAGAGCTGTGG+AGG | 0.589621 | 3_3:+89506908 | Msa0482560:CDS |
| TTCTGGTGGTGATGGAGATG+AGG | 0.590267 | 3_3:+89507771 | Msa0482560:CDS |
| AGTTTCGGTAAACTGGAATG+TGG | 0.592077 | 3_3:-89506798 | None:intergenic |
| CATCCCATCCTTCATGGTGA+GGG | 0.593258 | 3_3:+89507645 | Msa0482560:CDS |
| TCTTGTCTTCAAATCTGGCA+TGG | 0.593384 | 3_3:+89507131 | Msa0482560:CDS |
| ATTGTTACGGATACGGCTCA+GGG | 0.599593 | 3_3:-89506941 | None:intergenic |
| CAAGTCCATTCACCATGCTA+GGG | 0.599707 | 3_3:+89507155 | Msa0482560:CDS |
| GCAGCCAAGAAGGCTTCTGG+TGG | 0.599775 | 3_3:+89507757 | Msa0482560:CDS |
| ACCACCAAATGGACTAGTGA+GGG | 0.615882 | 3_3:-89507695 | None:intergenic |
| AGTAGGCAGGCAAACAGCGG+CGG | 0.616203 | 3_3:+89506754 | Msa0482560:CDS |
| ACATCCCATCCTTCATGGTG+AGG | 0.616704 | 3_3:+89507644 | Msa0482560:CDS |
| GCCACGTCGTCCATACGAGA+AGG | 0.630150 | 3_3:+89506840 | Msa0482560:CDS |
| TGAAGACAAGAGTCTGAAGA+CGG | 0.630423 | 3_3:-89507119 | None:intergenic |
| CCTAGTAGGCAGGCAAACAG+CGG | 0.639138 | 3_3:+89506751 | Msa0482560:CDS |
| GATGCTGAGTTGAAGCTGGT+CGG | 0.640820 | 3_3:+89506871 | Msa0482560:CDS |
| TTTCGGTAAACTGGAATGTG+GGG | 0.641183 | 3_3:-89506796 | None:intergenic |
| GCCTGATAAGAACCCTAGCA+TGG | 0.650504 | 3_3:-89507167 | None:intergenic |
| TGGTGGTGATGGAGATGAGG+AGG | 0.657794 | 3_3:+89507774 | Msa0482560:CDS |
| CACCACCAAATGGACTAGTG+AGG | 0.665175 | 3_3:-89507696 | None:intergenic |
| GTGTAAGAGAGAGCTGTGGA+GGG | 0.669438 | 3_3:+89506909 | Msa0482560:CDS |
| TTCGGTGTAAGAGAGAGCTG+TGG | 0.694839 | 3_3:+89506905 | Msa0482560:CDS |
| TCCTTCTCGTATGGACGACG+TGG | 0.696550 | 3_3:-89506841 | None:intergenic |
| TGGATGAGAAGAACCCTCGT+CGG | 0.698285 | 3_3:+89506983 | Msa0482560:CDS |
| CACCCTCAAAGATCCGACGA+GGG | 0.706490 | 3_3:-89506996 | None:intergenic |
| TCACCCTCAAAGATCCGACG+AGG | 0.715310 | 3_3:-89506997 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTTAATTGTAAGTT+TGG | + | chr3_3:89507223-89507242 | Msa0482560:intron | 10.0% |
| !! | TAATTATTTAATTGTAAGTT+TGG | + | chr3_3:89507223-89507242 | Msa0482560:intron | 10.0% |
| !!! | ATATCATTTTTTGTTTTCAT+AGG | + | chr3_3:89507602-89507621 | Msa0482560:intron | 15.0% |
| !!! | TATCATTTTTTGTTTTCATA+GGG | + | chr3_3:89507603-89507622 | Msa0482560:intron | 15.0% |
| !!! | ATATCATTTTTTGTTTTCAT+AGG | + | chr3_3:89507602-89507621 | Msa0482560:intron | 15.0% |
| !!! | TATCATTTTTTGTTTTCATA+GGG | + | chr3_3:89507603-89507622 | Msa0482560:intron | 15.0% |
| !! | ATGTCAATAGAACTTACTTT+TGG | + | chr3_3:89507314-89507333 | Msa0482560:intron | 25.0% |
| !!! | TGTCAATAGAACTTACTTTT+GGG | + | chr3_3:89507315-89507334 | Msa0482560:intron | 25.0% |
| !! | ACAAAGGTTTAAGCAAATTT+TGG | - | chr3_3:89507507-89507526 | None:intergenic | 25.0% |
| ! | TAAAAGGCAGAAATAAACAA+AGG | - | chr3_3:89507523-89507542 | None:intergenic | 25.0% |
| !!! | ATTTCTGCCTTTTATTTGAT+TGG | + | chr3_3:89507529-89507548 | Msa0482560:intron | 25.0% |
| !!! | TTTCTGCCTTTTATTTGATT+GGG | + | chr3_3:89507530-89507549 | Msa0482560:intron | 25.0% |
| ! | AGAAAACCCAATCAAATAAA+AGG | - | chr3_3:89507539-89507558 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTTCATAGGGT+TGG | + | chr3_3:89507607-89507626 | Msa0482560:intron | 25.0% |
| !!! | TTTTTTGTTTTCATAGGGTT+GGG | + | chr3_3:89507608-89507627 | Msa0482560:intron | 25.0% |
| !! | ATGTCAATAGAACTTACTTT+TGG | + | chr3_3:89507314-89507333 | Msa0482560:intron | 25.0% |
| !!! | TGTCAATAGAACTTACTTTT+GGG | + | chr3_3:89507315-89507334 | Msa0482560:intron | 25.0% |
| !! | ACAAAGGTTTAAGCAAATTT+TGG | - | chr3_3:89507507-89507526 | None:intergenic | 25.0% |
| ! | TAAAAGGCAGAAATAAACAA+AGG | - | chr3_3:89507523-89507542 | None:intergenic | 25.0% |
| !!! | ATTTCTGCCTTTTATTTGAT+TGG | + | chr3_3:89507529-89507548 | Msa0482560:intron | 25.0% |
| !!! | TTTCTGCCTTTTATTTGATT+GGG | + | chr3_3:89507530-89507549 | Msa0482560:intron | 25.0% |
| ! | AGAAAACCCAATCAAATAAA+AGG | - | chr3_3:89507539-89507558 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTTCATAGGGT+TGG | + | chr3_3:89507607-89507626 | Msa0482560:intron | 25.0% |
| !!! | TTTTTTGTTTTCATAGGGTT+GGG | + | chr3_3:89507608-89507627 | Msa0482560:intron | 25.0% |
| ! | ATCTGAGAGTTCGAATTTTT+GGG | + | chr3_3:89507267-89507286 | Msa0482560:intron | 30.0% |
| AACACAAAATTGTGCAAACA+GGG | - | chr3_3:89507358-89507377 | None:intergenic | 30.0% | |
| AAACACAAAATTGTGCAAAC+AGG | - | chr3_3:89507359-89507378 | None:intergenic | 30.0% | |
| !! | GTTTAAGCAAATTTTGGCAA+TGG | - | chr3_3:89507501-89507520 | None:intergenic | 30.0% |
| ! | ATCTGAGAGTTCGAATTTTT+GGG | + | chr3_3:89507267-89507286 | Msa0482560:intron | 30.0% |
| AACACAAAATTGTGCAAACA+GGG | - | chr3_3:89507358-89507377 | None:intergenic | 30.0% | |
| AAACACAAAATTGTGCAAAC+AGG | - | chr3_3:89507359-89507378 | None:intergenic | 30.0% | |
| !! | GTTTAAGCAAATTTTGGCAA+TGG | - | chr3_3:89507501-89507520 | None:intergenic | 30.0% |
| ATTCCAGTTTACCGAAACTA+TGG | + | chr3_3:89506802-89506821 | Msa0482560:CDS | 35.0% | |
| TTCCAGTTTACCGAAACTAT+GGG | + | chr3_3:89506803-89506822 | Msa0482560:CDS | 35.0% | |
| ! | TGAAGGTTTTCCCATAGTTT+CGG | - | chr3_3:89506816-89506835 | None:intergenic | 35.0% |
| TTCTAGCATTGTTACGGATA+CGG | - | chr3_3:89506951-89506970 | None:intergenic | 35.0% | |
| ! | AAAGGGTTCTAGCATTGTTA+CGG | - | chr3_3:89506957-89506976 | None:intergenic | 35.0% |
| CTTCTCATCCAATGTCAAAA+GGG | - | chr3_3:89506974-89506993 | None:intergenic | 35.0% | |
| TCTTCTCATCCAATGTCAAA+AGG | - | chr3_3:89506975-89506994 | None:intergenic | 35.0% | |
| TTGAGGAGAATGTTTAAGCA+TGG | + | chr3_3:89507027-89507046 | Msa0482560:CDS | 35.0% | |
| ! | CATCTGAGAGTTCGAATTTT+TGG | + | chr3_3:89507266-89507285 | Msa0482560:intron | 35.0% |
| ! | TCGAAGACAAAAAGTATGCT+TGG | + | chr3_3:89507413-89507432 | Msa0482560:intron | 35.0% |
| GGTAGAAAAACCAAGTCTTT+AGG | + | chr3_3:89507434-89507453 | Msa0482560:intron | 35.0% | |
| AGTATAGACACCTAAAGACT+TGG | - | chr3_3:89507447-89507466 | None:intergenic | 35.0% | |
| AGTCTTTAGGTGTCTATACT+TGG | + | chr3_3:89507447-89507466 | Msa0482560:intron | 35.0% | |
| CAATGGCAACAAAACATGTA+AGG | - | chr3_3:89507484-89507503 | None:intergenic | 35.0% | |
| TCATCGTTGTGAAACATGTT+TGG | + | chr3_3:89507567-89507586 | Msa0482560:intron | 35.0% | |
| ATTCCAGTTTACCGAAACTA+TGG | + | chr3_3:89506802-89506821 | Msa0482560:CDS | 35.0% | |
| TTCCAGTTTACCGAAACTAT+GGG | + | chr3_3:89506803-89506822 | Msa0482560:CDS | 35.0% | |
| ! | TGAAGGTTTTCCCATAGTTT+CGG | - | chr3_3:89506816-89506835 | None:intergenic | 35.0% |
| TTCTAGCATTGTTACGGATA+CGG | - | chr3_3:89506951-89506970 | None:intergenic | 35.0% | |
| ! | AAAGGGTTCTAGCATTGTTA+CGG | - | chr3_3:89506957-89506976 | None:intergenic | 35.0% |
| CTTCTCATCCAATGTCAAAA+GGG | - | chr3_3:89506974-89506993 | None:intergenic | 35.0% | |
| TCTTCTCATCCAATGTCAAA+AGG | - | chr3_3:89506975-89506994 | None:intergenic | 35.0% | |
| TTGAGGAGAATGTTTAAGCA+TGG | + | chr3_3:89507027-89507046 | Msa0482560:CDS | 35.0% | |
| ! | CATCTGAGAGTTCGAATTTT+TGG | + | chr3_3:89507266-89507285 | Msa0482560:intron | 35.0% |
| ! | TCGAAGACAAAAAGTATGCT+TGG | + | chr3_3:89507413-89507432 | Msa0482560:intron | 35.0% |
| GGTAGAAAAACCAAGTCTTT+AGG | + | chr3_3:89507434-89507453 | Msa0482560:intron | 35.0% | |
| AGTATAGACACCTAAAGACT+TGG | - | chr3_3:89507447-89507466 | None:intergenic | 35.0% | |
| AGTCTTTAGGTGTCTATACT+TGG | + | chr3_3:89507447-89507466 | Msa0482560:intron | 35.0% | |
| CAATGGCAACAAAACATGTA+AGG | - | chr3_3:89507484-89507503 | None:intergenic | 35.0% | |
| TCATCGTTGTGAAACATGTT+TGG | + | chr3_3:89507567-89507586 | Msa0482560:intron | 35.0% | |
| TTCACCACCAAAAACCTAGT+AGG | + | chr3_3:89506737-89506756 | Msa0482560:CDS | 40.0% | |
| TTTCGGTAAACTGGAATGTG+GGG | - | chr3_3:89506799-89506818 | None:intergenic | 40.0% | |
| GTTTCGGTAAACTGGAATGT+GGG | - | chr3_3:89506800-89506819 | None:intergenic | 40.0% | |
| AGTTTCGGTAAACTGGAATG+TGG | - | chr3_3:89506801-89506820 | None:intergenic | 40.0% | |
| TTCCCATAGTTTCGGTAAAC+TGG | - | chr3_3:89506808-89506827 | None:intergenic | 40.0% | |
| ! | TGCTAGAACCCTTTTGACAT+TGG | + | chr3_3:89506963-89506982 | Msa0482560:CDS | 40.0% |
| GAACAAGCTCGATTATGTGT+TGG | + | chr3_3:89507068-89507087 | Msa0482560:CDS | 40.0% | |
| TGAAGACAAGAGTCTGAAGA+CGG | - | chr3_3:89507122-89507141 | None:intergenic | 40.0% | |
| CAGACTCTTGTCTTCAAATC+TGG | + | chr3_3:89507126-89507145 | Msa0482560:CDS | 40.0% | |
| TCTTGTCTTCAAATCTGGCA+TGG | + | chr3_3:89507131-89507150 | Msa0482560:CDS | 40.0% | |
| TTATCAGGCAGAGACACATT+AGG | + | chr3_3:89507181-89507200 | Msa0482560:CDS | 40.0% | |
| !! | TTTGTTTTCATAGGGTTGGG+AGG | + | chr3_3:89507611-89507630 | Msa0482560:intron | 40.0% |
| ! | TTTTCCCTCACTAGTCCATT+TGG | + | chr3_3:89507691-89507710 | Msa0482560:CDS | 40.0% |
| TTCACCACCAAAAACCTAGT+AGG | + | chr3_3:89506737-89506756 | Msa0482560:CDS | 40.0% | |
| TTTCGGTAAACTGGAATGTG+GGG | - | chr3_3:89506799-89506818 | None:intergenic | 40.0% | |
| GTTTCGGTAAACTGGAATGT+GGG | - | chr3_3:89506800-89506819 | None:intergenic | 40.0% | |
| AGTTTCGGTAAACTGGAATG+TGG | - | chr3_3:89506801-89506820 | None:intergenic | 40.0% | |
| TTCCCATAGTTTCGGTAAAC+TGG | - | chr3_3:89506808-89506827 | None:intergenic | 40.0% | |
| ! | TGCTAGAACCCTTTTGACAT+TGG | + | chr3_3:89506963-89506982 | Msa0482560:CDS | 40.0% |
| GAACAAGCTCGATTATGTGT+TGG | + | chr3_3:89507068-89507087 | Msa0482560:CDS | 40.0% | |
| TGAAGACAAGAGTCTGAAGA+CGG | - | chr3_3:89507122-89507141 | None:intergenic | 40.0% | |
| CAGACTCTTGTCTTCAAATC+TGG | + | chr3_3:89507126-89507145 | Msa0482560:CDS | 40.0% | |
| TCTTGTCTTCAAATCTGGCA+TGG | + | chr3_3:89507131-89507150 | Msa0482560:CDS | 40.0% | |
| TTATCAGGCAGAGACACATT+AGG | + | chr3_3:89507181-89507200 | Msa0482560:CDS | 40.0% | |
| !! | TTTGTTTTCATAGGGTTGGG+AGG | + | chr3_3:89507611-89507630 | Msa0482560:intron | 40.0% |
| ! | TTTTCCCTCACTAGTCCATT+TGG | + | chr3_3:89507691-89507710 | Msa0482560:CDS | 40.0% |
| ! | TTGCCTGCCTACTAGGTTTT+TGG | - | chr3_3:89506747-89506766 | None:intergenic | 45.0% |
| ! | TTTGGATGCTGAGTTGAAGC+TGG | + | chr3_3:89506867-89506886 | Msa0482560:CDS | 45.0% |
| ATTGTTACGGATACGGCTCA+GGG | - | chr3_3:89506944-89506963 | None:intergenic | 45.0% | |
| CAAGTCCATTCACCATGCTA+GGG | + | chr3_3:89507155-89507174 | Msa0482560:CDS | 45.0% | |
| AAGAACCCTAGCATGGTGAA+TGG | - | chr3_3:89507163-89507182 | None:intergenic | 45.0% | |
| ACCATGCTAGGGTTCTTATC+AGG | + | chr3_3:89507166-89507185 | Msa0482560:CDS | 45.0% | |
| AGTGAACATCCCATCCTTCA+TGG | + | chr3_3:89507639-89507658 | Msa0482560:CDS | 45.0% | |
| TGAATCAACCCTCACCATGA+AGG | - | chr3_3:89507656-89507675 | None:intergenic | 45.0% | |
| !! | ACCACCAAATGGACTAGTGA+GGG | - | chr3_3:89507698-89507717 | None:intergenic | 45.0% |
| CGTGAAGCGAAAGAACCTTA+AGG | + | chr3_3:89507732-89507751 | Msa0482560:CDS | 45.0% | |
| ! | TTGCCTGCCTACTAGGTTTT+TGG | - | chr3_3:89506747-89506766 | None:intergenic | 45.0% |
| ! | TTTGGATGCTGAGTTGAAGC+TGG | + | chr3_3:89506867-89506886 | Msa0482560:CDS | 45.0% |
| ATTGTTACGGATACGGCTCA+GGG | - | chr3_3:89506944-89506963 | None:intergenic | 45.0% | |
| CAAGTCCATTCACCATGCTA+GGG | + | chr3_3:89507155-89507174 | Msa0482560:CDS | 45.0% | |
| AAGAACCCTAGCATGGTGAA+TGG | - | chr3_3:89507163-89507182 | None:intergenic | 45.0% | |
| ACCATGCTAGGGTTCTTATC+AGG | + | chr3_3:89507166-89507185 | Msa0482560:CDS | 45.0% | |
| AGTGAACATCCCATCCTTCA+TGG | + | chr3_3:89507639-89507658 | Msa0482560:CDS | 45.0% | |
| TGAATCAACCCTCACCATGA+AGG | - | chr3_3:89507656-89507675 | None:intergenic | 45.0% | |
| !! | ACCACCAAATGGACTAGTGA+GGG | - | chr3_3:89507698-89507717 | None:intergenic | 45.0% |
| CGTGAAGCGAAAGAACCTTA+AGG | + | chr3_3:89507732-89507751 | Msa0482560:CDS | 45.0% | |
| !! | CCTGCCTACTAGGTTTTTGG+TGG | - | chr3_3:89506744-89506763 | None:intergenic | 50.0% |
| CCACCAAAAACCTAGTAGGC+AGG | + | chr3_3:89506741-89506760 | Msa0482560:CDS | 50.0% | |
| !! | TCCATACGAGAAGGAGCGTT+TGG | + | chr3_3:89506849-89506868 | Msa0482560:CDS | 50.0% |
| TCCAAACGCTCCTTCTCGTA+TGG | - | chr3_3:89506853-89506872 | None:intergenic | 50.0% | |
| ! | GATGCTGAGTTGAAGCTGGT+CGG | + | chr3_3:89506871-89506890 | Msa0482560:CDS | 50.0% |
| TTGAAGCTGGTCGGAGAGTA+TGG | + | chr3_3:89506880-89506899 | Msa0482560:CDS | 50.0% | |
| ! | TGGTCGGAGAGTATGGTCTT+CGG | + | chr3_3:89506887-89506906 | Msa0482560:CDS | 50.0% |
| ! | TTCGGTGTAAGAGAGAGCTG+TGG | + | chr3_3:89506905-89506924 | Msa0482560:CDS | 50.0% |
| GTGTAAGAGAGAGCTGTGGA+GGG | + | chr3_3:89506909-89506928 | Msa0482560:CDS | 50.0% | |
| CATTGTTACGGATACGGCTC+AGG | - | chr3_3:89506945-89506964 | None:intergenic | 50.0% | |
| TGGATGAGAAGAACCCTCGT+CGG | + | chr3_3:89506983-89507002 | Msa0482560:CDS | 50.0% | |
| AACCCTCGTCGGATCTTTGA+GGG | + | chr3_3:89506994-89507013 | Msa0482560:CDS | 50.0% | |
| ! | TTGAGGGTGACGCACTTTTG+AGG | + | chr3_3:89507010-89507029 | Msa0482560:CDS | 50.0% |
| ! | CCTAGCATGGTGAATGGACT+TGG | - | chr3_3:89507157-89507176 | None:intergenic | 50.0% |
| CCAAGTCCATTCACCATGCT+AGG | + | chr3_3:89507154-89507173 | Msa0482560:CDS | 50.0% | |
| GCCTGATAAGAACCCTAGCA+TGG | - | chr3_3:89507170-89507189 | None:intergenic | 50.0% | |
| ! | TTTTCATAGGGTTGGGAGGC+AGG | + | chr3_3:89507615-89507634 | Msa0482560:intron | 50.0% |
| ACATCCCATCCTTCATGGTG+AGG | + | chr3_3:89507644-89507663 | Msa0482560:CDS | 50.0% | |
| CATCCCATCCTTCATGGTGA+GGG | + | chr3_3:89507645-89507664 | Msa0482560:CDS | 50.0% | |
| CAACCCTCACCATGAAGGAT+GGG | - | chr3_3:89507651-89507670 | None:intergenic | 50.0% | |
| TCAACCCTCACCATGAAGGA+TGG | - | chr3_3:89507652-89507671 | None:intergenic | 50.0% | |
| TCCCTCACTAGTCCATTTGG+TGG | + | chr3_3:89507694-89507713 | Msa0482560:CDS | 50.0% | |
| !! | CACCACCAAATGGACTAGTG+AGG | - | chr3_3:89507699-89507718 | None:intergenic | 50.0% |
| ! | CTCACTAGTCCATTTGGTGG+TGG | + | chr3_3:89507697-89507716 | Msa0482560:CDS | 50.0% |
| ATCACCACCAGAAGCCTTCT+TGG | - | chr3_3:89507764-89507783 | None:intergenic | 50.0% | |
| ! | AAGAAGGCTTCTGGTGGTGA+TGG | + | chr3_3:89507763-89507782 | Msa0482560:CDS | 50.0% |
| !! | TTCTGGTGGTGATGGAGATG+AGG | + | chr3_3:89507771-89507790 | Msa0482560:CDS | 50.0% |
| !! | CCTGCCTACTAGGTTTTTGG+TGG | - | chr3_3:89506744-89506763 | None:intergenic | 50.0% |
| CCACCAAAAACCTAGTAGGC+AGG | + | chr3_3:89506741-89506760 | Msa0482560:CDS | 50.0% | |
| !! | TCCATACGAGAAGGAGCGTT+TGG | + | chr3_3:89506849-89506868 | Msa0482560:CDS | 50.0% |
| TCCAAACGCTCCTTCTCGTA+TGG | - | chr3_3:89506853-89506872 | None:intergenic | 50.0% | |
| ! | GATGCTGAGTTGAAGCTGGT+CGG | + | chr3_3:89506871-89506890 | Msa0482560:CDS | 50.0% |
| TTGAAGCTGGTCGGAGAGTA+TGG | + | chr3_3:89506880-89506899 | Msa0482560:CDS | 50.0% | |
| ! | TGGTCGGAGAGTATGGTCTT+CGG | + | chr3_3:89506887-89506906 | Msa0482560:CDS | 50.0% |
| ! | TTCGGTGTAAGAGAGAGCTG+TGG | + | chr3_3:89506905-89506924 | Msa0482560:CDS | 50.0% |
| GTGTAAGAGAGAGCTGTGGA+GGG | + | chr3_3:89506909-89506928 | Msa0482560:CDS | 50.0% | |
| CATTGTTACGGATACGGCTC+AGG | - | chr3_3:89506945-89506964 | None:intergenic | 50.0% | |
| TGGATGAGAAGAACCCTCGT+CGG | + | chr3_3:89506983-89507002 | Msa0482560:CDS | 50.0% | |
| AACCCTCGTCGGATCTTTGA+GGG | + | chr3_3:89506994-89507013 | Msa0482560:CDS | 50.0% | |
| ! | TTGAGGGTGACGCACTTTTG+AGG | + | chr3_3:89507010-89507029 | Msa0482560:CDS | 50.0% |
| ! | CCTAGCATGGTGAATGGACT+TGG | - | chr3_3:89507157-89507176 | None:intergenic | 50.0% |
| CCAAGTCCATTCACCATGCT+AGG | + | chr3_3:89507154-89507173 | Msa0482560:CDS | 50.0% | |
| GCCTGATAAGAACCCTAGCA+TGG | - | chr3_3:89507170-89507189 | None:intergenic | 50.0% | |
| ! | TTTTCATAGGGTTGGGAGGC+AGG | + | chr3_3:89507615-89507634 | Msa0482560:intron | 50.0% |
| ACATCCCATCCTTCATGGTG+AGG | + | chr3_3:89507644-89507663 | Msa0482560:CDS | 50.0% | |
| CATCCCATCCTTCATGGTGA+GGG | + | chr3_3:89507645-89507664 | Msa0482560:CDS | 50.0% | |
| CAACCCTCACCATGAAGGAT+GGG | - | chr3_3:89507651-89507670 | None:intergenic | 50.0% | |
| TCAACCCTCACCATGAAGGA+TGG | - | chr3_3:89507652-89507671 | None:intergenic | 50.0% | |
| TCCCTCACTAGTCCATTTGG+TGG | + | chr3_3:89507694-89507713 | Msa0482560:CDS | 50.0% | |
| !! | CACCACCAAATGGACTAGTG+AGG | - | chr3_3:89507699-89507718 | None:intergenic | 50.0% |
| ! | CTCACTAGTCCATTTGGTGG+TGG | + | chr3_3:89507697-89507716 | Msa0482560:CDS | 50.0% |
| ATCACCACCAGAAGCCTTCT+TGG | - | chr3_3:89507764-89507783 | None:intergenic | 50.0% | |
| ! | AAGAAGGCTTCTGGTGGTGA+TGG | + | chr3_3:89507763-89507782 | Msa0482560:CDS | 50.0% |
| !! | TTCTGGTGGTGATGGAGATG+AGG | + | chr3_3:89507771-89507790 | Msa0482560:CDS | 50.0% |
| CCTAGTAGGCAGGCAAACAG+CGG | + | chr3_3:89506751-89506770 | Msa0482560:CDS | 55.0% | |
| TGGACGACGTGGCTTCTTGA+AGG | - | chr3_3:89506833-89506852 | None:intergenic | 55.0% | |
| TCCTTCTCGTATGGACGACG+TGG | - | chr3_3:89506844-89506863 | None:intergenic | 55.0% | |
| GGTGTAAGAGAGAGCTGTGG+AGG | + | chr3_3:89506908-89506927 | Msa0482560:CDS | 55.0% | |
| GAACCCTCGTCGGATCTTTG+AGG | + | chr3_3:89506993-89507012 | Msa0482560:CDS | 55.0% | |
| CACCCTCAAAGATCCGACGA+GGG | - | chr3_3:89506999-89507018 | None:intergenic | 55.0% | |
| TCACCCTCAAAGATCCGACG+AGG | - | chr3_3:89507000-89507019 | None:intergenic | 55.0% | |
| CCAGGAAGACCACCACCAAA+TGG | - | chr3_3:89507709-89507728 | None:intergenic | 55.0% | |
| !! | CCATTTGGTGGTGGTCTTCC+TGG | + | chr3_3:89507706-89507725 | Msa0482560:CDS | 55.0% |
| TTCTTTCGCTTCACGCGACC+AGG | - | chr3_3:89507727-89507746 | None:intergenic | 55.0% | |
| CCTTCTTGGCTGCAGCCTTA+AGG | - | chr3_3:89507750-89507769 | None:intergenic | 55.0% | |
| CCTTAAGGCTGCAGCCAAGA+AGG | + | chr3_3:89507747-89507766 | Msa0482560:CDS | 55.0% | |
| !! | TGGTGGTGATGGAGATGAGG+AGG | + | chr3_3:89507774-89507793 | Msa0482560:CDS | 55.0% |
| CCTAGTAGGCAGGCAAACAG+CGG | + | chr3_3:89506751-89506770 | Msa0482560:CDS | 55.0% | |
| TGGACGACGTGGCTTCTTGA+AGG | - | chr3_3:89506833-89506852 | None:intergenic | 55.0% | |
| TCCTTCTCGTATGGACGACG+TGG | - | chr3_3:89506844-89506863 | None:intergenic | 55.0% | |
| GGTGTAAGAGAGAGCTGTGG+AGG | + | chr3_3:89506908-89506927 | Msa0482560:CDS | 55.0% | |
| GAACCCTCGTCGGATCTTTG+AGG | + | chr3_3:89506993-89507012 | Msa0482560:CDS | 55.0% | |
| CACCCTCAAAGATCCGACGA+GGG | - | chr3_3:89506999-89507018 | None:intergenic | 55.0% | |
| TCACCCTCAAAGATCCGACG+AGG | - | chr3_3:89507000-89507019 | None:intergenic | 55.0% | |
| CCAGGAAGACCACCACCAAA+TGG | - | chr3_3:89507709-89507728 | None:intergenic | 55.0% | |
| !! | CCATTTGGTGGTGGTCTTCC+TGG | + | chr3_3:89507706-89507725 | Msa0482560:CDS | 55.0% |
| TTCTTTCGCTTCACGCGACC+AGG | - | chr3_3:89507727-89507746 | None:intergenic | 55.0% | |
| CCTTCTTGGCTGCAGCCTTA+AGG | - | chr3_3:89507750-89507769 | None:intergenic | 55.0% | |
| CCTTAAGGCTGCAGCCAAGA+AGG | + | chr3_3:89507747-89507766 | Msa0482560:CDS | 55.0% | |
| !! | TGGTGGTGATGGAGATGAGG+AGG | + | chr3_3:89507774-89507793 | Msa0482560:CDS | 55.0% |
| CCGCTGTTTGCCTGCCTACT+AGG | - | chr3_3:89506754-89506773 | None:intergenic | 60.0% | |
| AGTAGGCAGGCAAACAGCGG+CGG | + | chr3_3:89506754-89506773 | Msa0482560:CDS | 60.0% | |
| GCCACGTCGTCCATACGAGA+AGG | + | chr3_3:89506840-89506859 | Msa0482560:CDS | 60.0% | |
| GCTGCAGCCAAGAAGGCTTC+TGG | + | chr3_3:89507754-89507773 | Msa0482560:CDS | 60.0% | |
| GCAGCCAAGAAGGCTTCTGG+TGG | + | chr3_3:89507757-89507776 | Msa0482560:CDS | 60.0% | |
| CCGCTGTTTGCCTGCCTACT+AGG | - | chr3_3:89506754-89506773 | None:intergenic | 60.0% | |
| AGTAGGCAGGCAAACAGCGG+CGG | + | chr3_3:89506754-89506773 | Msa0482560:CDS | 60.0% | |
| GCCACGTCGTCCATACGAGA+AGG | + | chr3_3:89506840-89506859 | Msa0482560:CDS | 60.0% | |
| GCTGCAGCCAAGAAGGCTTC+TGG | + | chr3_3:89507754-89507773 | Msa0482560:CDS | 60.0% | |
| GCAGCCAAGAAGGCTTCTGG+TGG | + | chr3_3:89507757-89507776 | Msa0482560:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 89506700 | 89507807 | 89506700 | ID=Msa0482560;Name=Msa0482560 |
| chr3_3 | mRNA | 89506700 | 89507807 | 89506700 | ID=Msa0482560-mRNA-1;Parent=Msa0482560;Name=Msa0482560-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|2|0|228 |
| chr3_3 | exon | 89506700 | 89507202 | 89506700 | ID=Msa0482560-mRNA-1:exon:26205;Parent=Msa0482560-mRNA-1 |
| chr3_3 | exon | 89507624 | 89507807 | 89507624 | ID=Msa0482560-mRNA-1:exon:26206;Parent=Msa0482560-mRNA-1 |
| chr3_3 | CDS | 89506700 | 89507202 | 89506700 | ID=Msa0482560-mRNA-1:cds;Parent=Msa0482560-mRNA-1 |
| chr3_3 | CDS | 89507624 | 89507807 | 89507624 | ID=Msa0482560-mRNA-1:cds;Parent=Msa0482560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
