Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385480 | XP_013456527.1 | 99.614 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385480 | sp|Q9LZH9|RL7A2_ARATH | 88.031 | 259 | 28 | 1 | 1 | 259 | 1 | 256 | 1.89e-169 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385480 | I3T063 | 99.614 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 0.0 | 521 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1385480 | 0.878750 | 2.181867e-69 | -8.615850e-47 |
| Msa0003330 | Msa1385480 | 0.853748 | 1.946324e-61 | -8.615850e-47 |
| Msa0016350 | Msa1385480 | 0.824508 | 7.773111e-54 | -8.615850e-47 |
| Msa0027590 | Msa1385480 | 0.865579 | 5.329321e-65 | -8.615850e-47 |
| Msa0040220 | Msa1385480 | 0.857253 | 1.851059e-62 | -8.615850e-47 |
| Msa0042510 | Msa1385480 | 0.816726 | 4.765667e-52 | -8.615850e-47 |
| Msa0075350 | Msa1385480 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
| Msa0079560 | Msa1385480 | 0.829648 | 4.575708e-55 | -8.615850e-47 |
| Msa0086160 | Msa1385480 | 0.851868 | 6.705603e-61 | -8.615850e-47 |
| Msa0087910 | Msa1385480 | 0.891750 | 2.987421e-74 | -8.615850e-47 |
| Msa0114600 | Msa1385480 | 0.858238 | 9.448990e-63 | -8.615850e-47 |
| Msa0116600 | Msa1385480 | 0.820134 | 8.050886e-53 | -8.615850e-47 |
| Msa0116690 | Msa1385480 | 0.815273 | 1.005855e-51 | -8.615850e-47 |
| Msa1351020 | Msa1385480 | 0.890752 | 7.413077e-74 | -8.615850e-47 |
| Msa1351910 | Msa1385480 | 0.855683 | 5.353080e-62 | -8.615850e-47 |
| Msa1353300 | Msa1385480 | 0.820128 | 8.077663e-53 | -8.615850e-47 |
| Msa1358710 | Msa1385480 | 0.846797 | 1.732874e-59 | -8.615850e-47 |
| Msa1367540 | Msa1385480 | 0.819306 | 1.244890e-52 | -8.615850e-47 |
| Msa1371410 | Msa1385480 | 0.825336 | 4.955462e-54 | -8.615850e-47 |
| Msa1385480 | Msa1387750 | 0.801712 | 7.910057e-49 | -8.615850e-47 |
| Msa1385480 | Msa1390760 | 0.893932 | 3.962669e-75 | -8.615850e-47 |
| Msa1385480 | Msa1403520 | 0.805828 | 1.105427e-49 | -8.615850e-47 |
| Msa1385480 | Msa1407550 | 0.885212 | 9.879067e-72 | -8.615850e-47 |
| Msa1385480 | Msa1413570 | 0.868993 | 4.320266e-66 | -8.615850e-47 |
| Msa1385480 | Msa1415620 | 0.823651 | 1.235062e-53 | -8.615850e-47 |
| Msa1385480 | Msa1424570 | 0.850888 | 1.268942e-60 | -8.615850e-47 |
| Msa1385480 | Msa1432310 | 0.894614 | 2.090179e-75 | -8.615850e-47 |
| Msa1385480 | Msa1444680 | 0.803064 | 4.166774e-49 | -8.615850e-47 |
| Msa1385480 | Msa1446410 | 0.857883 | 1.204899e-62 | -8.615850e-47 |
| Msa1385480 | Msa1450560 | 0.864539 | 1.130600e-64 | -8.615850e-47 |
| Msa1385480 | Msa1463570 | 0.937103 | 5.965084e-98 | -8.615850e-47 |
| Msa1385480 | Msa1465700 | 0.882753 | 7.993615e-71 | -8.615850e-47 |
| Msa0602900 | Msa1385480 | 0.917252 | 6.653837e-86 | -8.615850e-47 |
| Msa0605600 | Msa1385480 | 0.823686 | 1.211635e-53 | -8.615850e-47 |
| Msa0605890 | Msa1385480 | 0.889747 | 1.835835e-73 | -8.615850e-47 |
| Msa0609120 | Msa1385480 | 0.831098 | 2.023563e-55 | -8.615850e-47 |
| Msa0609350 | Msa1385480 | 0.800503 | 1.397738e-48 | -8.615850e-47 |
| Msa0619230 | Msa1385480 | 0.894882 | 1.622873e-75 | -8.615850e-47 |
| Msa0622230 | Msa1385480 | 0.807513 | 4.871769e-50 | -8.615850e-47 |
| Msa0629280 | Msa1385480 | 0.804632 | 1.967946e-49 | -8.615850e-47 |
| Msa0643960 | Msa1385480 | 0.914517 | 1.747337e-84 | -8.615850e-47 |
| Msa0649890 | Msa1385480 | 0.869622 | 2.696734e-66 | -8.615850e-47 |
| Msa0653060 | Msa1385480 | 0.813493 | 2.488891e-51 | -8.615850e-47 |
| Msa0656450 | Msa1385480 | 0.864766 | 9.601982e-65 | -8.615850e-47 |
| Msa0663400 | Msa1385480 | 0.857033 | 2.150173e-62 | -8.615850e-47 |
| Msa0667110 | Msa1385480 | 0.812108 | 5.004322e-51 | -8.615850e-47 |
| Msa0686550 | Msa1385480 | 0.832223 | 1.068740e-55 | -8.615850e-47 |
| Msa0694400 | Msa1385480 | 0.994101 | 1.413595e-204 | -8.615850e-47 |
| Msa0704860 | Msa1385480 | 0.874520 | 6.332778e-68 | -8.615850e-47 |
| Msa0708630 | Msa1385480 | 0.906692 | 1.130864e-80 | -8.615850e-47 |
| Msa0715970 | Msa1385480 | 0.816529 | 5.277599e-52 | -8.615850e-47 |
| Msa0718560 | Msa1385480 | 0.812670 | 3.772861e-51 | -8.615850e-47 |
| Msa0741510 | Msa1385480 | 0.878820 | 2.060500e-69 | -8.615850e-47 |
| Msa0748350 | Msa1385480 | 0.837366 | 5.422297e-57 | -8.615850e-47 |
| Msa0749000 | Msa1385480 | 0.828204 | 1.023896e-54 | -8.615850e-47 |
| Msa0788380 | Msa1385480 | 0.815029 | 1.139877e-51 | -8.615850e-47 |
| Msa0790450 | Msa1385480 | 0.859429 | 4.160485e-63 | -8.615850e-47 |
| Msa0796490 | Msa1385480 | 0.843735 | 1.166805e-58 | -8.615850e-47 |
| Msa0798590 | Msa1385480 | 0.833870 | 4.159568e-56 | -8.615850e-47 |
| Msa0123290 | Msa1385480 | 0.838171 | 3.369184e-57 | -8.615850e-47 |
| Msa0127230 | Msa1385480 | 0.817278 | 3.582747e-52 | -8.615850e-47 |
| Msa0128330 | Msa1385480 | 0.940340 | 2.760751e-100 | -8.615850e-47 |
| Msa0128750 | Msa1385480 | 0.820813 | 5.624209e-53 | -8.615850e-47 |
| Msa0132460 | Msa1385480 | 0.906157 | 2.003116e-80 | -8.615850e-47 |
| Msa0134580 | Msa1385480 | 0.882561 | 9.398399e-71 | -8.615850e-47 |
| Msa0136400 | Msa1385480 | 0.833987 | 3.888108e-56 | -8.615850e-47 |
| Msa0144810 | Msa1385480 | 0.812282 | 4.586033e-51 | -8.615850e-47 |
| Msa0146610 | Msa1385480 | 0.818094 | 2.344933e-52 | -8.615850e-47 |
| Msa0167860 | Msa1385480 | 0.919319 | 5.221634e-87 | -8.615850e-47 |
| Msa0168320 | Msa1385480 | 0.819320 | 1.235876e-52 | -8.615850e-47 |
| Msa0174580 | Msa1385480 | 0.943007 | 2.609572e-102 | -8.615850e-47 |
| Msa0182050 | Msa1385480 | 0.910236 | 2.347536e-82 | -8.615850e-47 |
| Msa0182100 | Msa1385480 | 0.901299 | 3.083778e-78 | -8.615850e-47 |
| Msa0187810 | Msa1385480 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
| Msa0188740 | Msa1385480 | 0.823769 | 1.158681e-53 | -8.615850e-47 |
| Msa0191450 | Msa1385480 | 0.833276 | 5.853994e-56 | -8.615850e-47 |
| Msa0191550 | Msa1385480 | 0.853576 | 2.181849e-61 | -8.615850e-47 |
| Msa0192300 | Msa1385480 | 0.900412 | 7.517109e-78 | -8.615850e-47 |
| Msa0192490 | Msa1385480 | 0.829534 | 4.878995e-55 | -8.615850e-47 |
| Msa0194940 | Msa1385480 | 0.858616 | 7.290641e-63 | -8.615850e-47 |
| Msa0219090 | Msa1385480 | 0.810662 | 1.031079e-50 | -8.615850e-47 |
| Msa0225350 | Msa1385480 | 0.824100 | 9.689081e-54 | -8.615850e-47 |
| Msa0233550 | Msa1385480 | 0.807495 | 4.916946e-50 | -8.615850e-47 |
| Msa0234850 | Msa1385480 | 0.832452 | 9.378104e-56 | -8.615850e-47 |
| Msa0234900 | Msa1385480 | 0.827493 | 1.517266e-54 | -8.615850e-47 |
| Msa0235050 | Msa1385480 | 0.850290 | 1.868908e-60 | -8.615850e-47 |
| Msa1235950 | Msa1385480 | 0.893206 | 7.801868e-75 | -8.615850e-47 |
| Msa1235980 | Msa1385480 | 0.898673 | 4.213821e-77 | -8.615850e-47 |
| Msa1237040 | Msa1385480 | 0.881600 | 2.097761e-70 | -8.615850e-47 |
| Msa1255830 | Msa1385480 | 0.853569 | 2.191053e-61 | -8.615850e-47 |
| Msa1255850 | Msa1385480 | 0.864797 | 9.389134e-65 | -8.615850e-47 |
| Msa1258540 | Msa1385480 | 0.862387 | 5.255183e-64 | -8.615850e-47 |
| Msa1270640 | Msa1385480 | 0.870285 | 1.638207e-66 | -8.615850e-47 |
| Msa1270710 | Msa1385480 | 0.869297 | 3.440186e-66 | -8.615850e-47 |
| Msa1278130 | Msa1385480 | 0.832043 | 1.184150e-55 | -8.615850e-47 |
| Msa1284060 | Msa1385480 | 0.851738 | 7.298360e-61 | -8.615850e-47 |
| Msa1296090 | Msa1385480 | 0.866990 | 1.902731e-65 | -8.615850e-47 |
| Msa1311400 | Msa1385480 | 0.800547 | 1.369119e-48 | -8.615850e-47 |
| Msa1316100 | Msa1385480 | 0.855975 | 4.397613e-62 | -8.615850e-47 |
| Msa1317390 | Msa1385480 | 0.886393 | 3.556033e-72 | -8.615850e-47 |
| Msa1330730 | Msa1385480 | 0.806486 | 8.037476e-50 | -8.615850e-47 |
| Msa1333350 | Msa1385480 | 0.812541 | 4.025014e-51 | -8.615850e-47 |
| Msa1333370 | Msa1385480 | 0.814158 | 1.776204e-51 | -8.615850e-47 |
| Msa1341780 | Msa1385480 | 0.874281 | 7.634326e-68 | -8.615850e-47 |
| Msa1344160 | Msa1385480 | 0.842774 | 2.105145e-58 | -8.615850e-47 |
| Msa1344190 | Msa1385480 | 0.836873 | 7.251073e-57 | -8.615850e-47 |
| Msa0369410 | Msa1385480 | 0.842738 | 2.152726e-58 | -8.615850e-47 |
| Msa0371490 | Msa1385480 | 0.828495 | 8.711075e-55 | -8.615850e-47 |
| Msa0377370 | Msa1385480 | 0.851205 | 1.032610e-60 | -8.615850e-47 |
| Msa0377520 | Msa1385480 | 0.845006 | 5.313931e-59 | -8.615850e-47 |
| Msa0419710 | Msa1385480 | 0.818906 | 1.534535e-52 | -8.615850e-47 |
| Msa0426090 | Msa1385480 | 0.879728 | 9.830242e-70 | -8.615850e-47 |
| Msa0426250 | Msa1385480 | 0.901878 | 1.714929e-78 | -8.615850e-47 |
| Msa0432750 | Msa1385480 | 0.821056 | 4.944474e-53 | -8.615850e-47 |
| Msa0433060 | Msa1385480 | 0.821243 | 4.478830e-53 | -8.615850e-47 |
| Msa0450150 | Msa1385480 | 0.867042 | 1.831936e-65 | -8.615850e-47 |
| Msa0472480 | Msa1385480 | 0.869490 | 2.977883e-66 | -8.615850e-47 |
| Msa0475810 | Msa1385480 | 0.817636 | 2.976118e-52 | -8.615850e-47 |
| Msa0479980 | Msa1385480 | 0.818909 | 1.532513e-52 | -8.615850e-47 |
| Msa0481520 | Msa1385480 | 0.865606 | 5.227956e-65 | -8.615850e-47 |
| Msa0481800 | Msa1385480 | 0.814715 | 1.337798e-51 | -8.615850e-47 |
| Msa0482560 | Msa1385480 | 0.873407 | 1.506167e-67 | -8.615850e-47 |
| Msa1040160 | Msa1385480 | 0.835133 | 2.003228e-56 | -8.615850e-47 |
| Msa1041680 | Msa1385480 | 0.800367 | 1.489822e-48 | -8.615850e-47 |
| Msa1047020 | Msa1385480 | 0.822957 | 1.793859e-53 | -8.615850e-47 |
| Msa1050100 | Msa1385480 | 0.804814 | 1.803161e-49 | -8.615850e-47 |
| Msa1054280 | Msa1385480 | 0.806911 | 6.534526e-50 | -8.615850e-47 |
| Msa1068660 | Msa1385480 | 0.807722 | 4.398389e-50 | -8.615850e-47 |
| Msa1079910 | Msa1385480 | 0.861632 | 8.949424e-64 | -8.615850e-47 |
| Msa1080390 | Msa1385480 | 0.823019 | 1.735408e-53 | -8.615850e-47 |
| Msa1082050 | Msa1385480 | 0.835619 | 1.509717e-56 | -8.615850e-47 |
| Msa1083370 | Msa1385480 | 0.845174 | 4.788081e-59 | -8.615850e-47 |
| Msa1085850 | Msa1385480 | 0.848286 | 6.752812e-60 | -8.615850e-47 |
| Msa1093500 | Msa1385480 | 0.870816 | 1.096065e-66 | -8.615850e-47 |
| Msa0264640 | Msa1385480 | 0.835346 | 1.770108e-56 | -8.615850e-47 |
| Msa0270160 | Msa1385480 | 0.860503 | 1.974618e-63 | -8.615850e-47 |
| Msa0277600 | Msa1385480 | 0.915654 | 4.551611e-85 | -8.615850e-47 |
| Msa0281330 | Msa1385480 | 0.802536 | 5.355035e-49 | -8.615850e-47 |
| Msa0281370 | Msa1385480 | 0.820600 | 6.294726e-53 | -8.615850e-47 |
| Msa0301220 | Msa1385480 | 0.824768 | 6.749043e-54 | -8.615850e-47 |
| Msa0301250 | Msa1385480 | 0.906497 | 1.393601e-80 | -8.615850e-47 |
| Msa0313060 | Msa1385480 | 0.911994 | 3.233631e-83 | -8.615850e-47 |
| Msa0315430 | Msa1385480 | 0.931201 | 5.358286e-94 | -8.615850e-47 |
| Msa0340560 | Msa1385480 | 0.806978 | 6.326676e-50 | -8.615850e-47 |
| Msa1116940 | Msa1385480 | 0.816242 | 6.118372e-52 | -8.615850e-47 |
| Msa1124850 | Msa1385480 | 0.844788 | 6.084156e-59 | -8.615850e-47 |
| Msa1125900 | Msa1385480 | 0.819118 | 1.373597e-52 | -8.615850e-47 |
| Msa1126100 | Msa1385480 | 0.818167 | 2.257400e-52 | -8.615850e-47 |
| Msa1126690 | Msa1385480 | 0.872549 | 2.919610e-67 | -8.615850e-47 |
| Msa1164150 | Msa1385480 | 0.825578 | 4.343330e-54 | -8.615850e-47 |
| Msa1165640 | Msa1385480 | 0.809291 | 2.035168e-50 | -8.615850e-47 |
| Msa1166570 | Msa1385480 | 0.803901 | 2.793726e-49 | -8.615850e-47 |
| Msa1180000 | Msa1385480 | 0.886490 | 3.268287e-72 | -8.615850e-47 |
| Msa1206240 | Msa1385480 | 0.803395 | 3.558253e-49 | -8.615850e-47 |
| Msa1208330 | Msa1385480 | 0.843948 | 1.023290e-58 | -8.615850e-47 |
| Msa1219760 | Msa1385480 | 0.805858 | 1.089376e-49 | -8.615850e-47 |
| Msa0511760 | Msa1385480 | 0.872688 | 2.624429e-67 | -8.615850e-47 |
| Msa0517480 | Msa1385480 | 0.840893 | 6.609249e-58 | -8.615850e-47 |
| Msa0524680 | Msa1385480 | 0.819974 | 8.758984e-53 | -8.615850e-47 |
| Msa0529900 | Msa1385480 | 0.839485 | 1.540859e-57 | -8.615850e-47 |
| Msa0547920 | Msa1385480 | 0.920834 | 7.737271e-88 | -8.615850e-47 |
| Msa0550490 | Msa1385480 | 0.822471 | 2.327688e-53 | -8.615850e-47 |
| Msa0568380 | Msa1385480 | 0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa0573550 | Msa1385480 | 0.909693 | 4.293766e-82 | -8.615850e-47 |
| Msa0574780 | Msa1385480 | 0.870650 | 1.243119e-66 | -8.615850e-47 |
| Msa0578010 | Msa1385480 | 0.863935 | 1.745332e-64 | -8.615850e-47 |
| Msa0579830 | Msa1385480 | 0.870325 | 1.589137e-66 | -8.615850e-47 |
| Msa0585570 | Msa1385480 | 0.845242 | 4.589573e-59 | -8.615850e-47 |
| Msa0589160 | Msa1385480 | 0.809390 | 1.937233e-50 | -8.615850e-47 |
| Msa0597240 | Msa1385480 | 0.876592 | 1.235224e-68 | -8.615850e-47 |
| Msa0902730 | Msa1385480 | 0.871461 | 6.714901e-67 | -8.615850e-47 |
| Msa0929680 | Msa1385480 | 0.849714 | 2.708768e-60 | -8.615850e-47 |
| Msa0929700 | Msa1385480 | 0.918969 | 8.074505e-87 | -8.615850e-47 |
| Msa0930100 | Msa1385480 | 0.860122 | 2.573453e-63 | -8.615850e-47 |
| Msa0930360 | Msa1385480 | 0.829669 | 4.524343e-55 | -8.615850e-47 |
| Msa0930790 | Msa1385480 | 0.853395 | 2.457756e-61 | -8.615850e-47 |
| Msa0930890 | Msa1385480 | 0.890796 | 7.122574e-74 | -8.615850e-47 |
| Msa0978470 | Msa1385480 | 0.835501 | 1.617505e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385480 | MtrunA17_Chr4g0037721 | 99.614 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 0.0 | 521 |
| Msa1385480 | MtrunA17_Chr7g0224411 | 93.077 | 260 | 17 | 1 | 1 | 259 | 1 | 260 | 5.30e-179 | 492 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385480 | AT3G62870.1 | 88.031 | 259 | 28 | 1 | 1 | 259 | 1 | 256 | 1.92e-170 | 471 |
| Msa1385480 | AT2G47610.1 | 87.552 | 241 | 30 | 0 | 19 | 259 | 17 | 257 | 1.50e-161 | 448 |
Find 93 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTCTTGGCTTGGGATT+TGG | 0.209141 | tig0020757:-23176 | None:intergenic |
| ATTTGAGTAAATAACAAAAT+TGG | 0.218176 | tig0020757:-23278 | None:intergenic |
| TACCTCTGGCGACAGAATTT+TGG | 0.230393 | tig0020757:+23416 | Msa1385480:three_prime_UTR |
| AGGCCATACTTCACATTAAT+AGG | 0.264776 | tig0020757:-22555 | None:intergenic |
| CTTTGCCTTGGTCTTGGCTT+GGG | 0.278418 | tig0020757:-23182 | None:intergenic |
| CAGGGTCCTAGAGGCGATTA+AGG | 0.309642 | tig0020757:+23002 | Msa1385480:CDS |
| CCTTTCCTTTGCCTTGGTCT+TGG | 0.313711 | tig0020757:-23188 | None:intergenic |
| CTTCGGCCACTTCACGAATC+TGG | 0.319581 | tig0020757:-21501 | None:intergenic |
| CCTTTGCCTTGGTCTTGGCT+TGG | 0.320697 | tig0020757:-23183 | None:intergenic |
| GAGAAGCGTCCAAAGCAATT+TGG | 0.321546 | tig0020757:+21443 | Msa1385480:CDS |
| TTCTTCTTTGAAGCTGCAAC+TGG | 0.338108 | tig0020757:-21296 | None:intergenic |
| TTGCCCTTAACAATACAGTA+TGG | 0.340642 | tig0020757:-22801 | None:intergenic |
| CATTCTCTGGGCAGCCTCCT+TGG | 0.347883 | tig0020757:-23218 | None:intergenic |
| CCTCCAATTCCAAATTGCTT+TGG | 0.359017 | tig0020757:-21452 | None:intergenic |
| AAGCCTATTAATGTGAAGTA+TGG | 0.361147 | tig0020757:+22552 | Msa1385480:CDS |
| CGTCCAAAGCAATTTGGAAT+TGG | 0.369614 | tig0020757:+21449 | Msa1385480:CDS |
| TTCTTCTCAGCCTTGTCCTC+AGG | 0.377096 | tig0020757:-22471 | None:intergenic |
| CTCTGCACCTGAACGTTCTT+CGG | 0.382996 | tig0020757:-21518 | None:intergenic |
| GAAGTGGGGTGGTGGAATCA+TGG | 0.397393 | tig0020757:+23150 | Msa1385480:CDS |
| AATCCCATACTGTATTGTTA+AGG | 0.413635 | tig0020757:+22797 | Msa1385480:CDS |
| AATAAGCCTTTCCTTTGCCT+TGG | 0.418296 | tig0020757:-23194 | None:intergenic |
| TCTGGCTTCCAGCCTTGTGC+AGG | 0.421984 | tig0020757:+22766 | Msa1385480:CDS |
| ACAACTCCTAGGTCATTCTC+TGG | 0.422899 | tig0020757:-23231 | None:intergenic |
| TCCATCTTCCTGCACAAGGC+TGG | 0.428911 | tig0020757:-22774 | None:intergenic |
| AAGGGCTCAGGCAGAGGCTG+AGG | 0.430646 | tig0020757:+22509 | Msa1385480:CDS |
| TACAGGAAGAAGTGGGGTGG+TGG | 0.431668 | tig0020757:+23142 | Msa1385480:CDS |
| TCCAGCCTTGTGCAGGAAGA+TGG | 0.436588 | tig0020757:+22773 | Msa1385480:CDS |
| ACCCCATTGAATTAGTTGTC+TGG | 0.442276 | tig0020757:+22748 | Msa1385480:CDS |
| AGCCAGACAACTAATTCAAT+GGG | 0.443985 | tig0020757:-22750 | None:intergenic |
| TGAGGAGTACAGGAAGAAGT+GGG | 0.451890 | tig0020757:+23135 | Msa1385480:CDS |
| ATCCCATACTGTATTGTTAA+GGG | 0.456742 | tig0020757:+22798 | Msa1385480:CDS |
| AAGACAAAATGGAGTTCAGC+AGG | 0.470262 | tig0020757:+22983 | Msa1385480:CDS |
| ATGAGGAGTACAGGAAGAAG+TGG | 0.472066 | tig0020757:+23134 | Msa1385480:CDS |
| CGTTTGTTATTTACAATAGC+CGG | 0.482373 | tig0020757:+23346 | Msa1385480:three_prime_UTR |
| CCAAAGCAATTTGGAATTGG+AGG | 0.482647 | tig0020757:+21452 | Msa1385480:CDS |
| CATGAGCAATCACGACAAGC+TGG | 0.488943 | tig0020757:-22719 | None:intergenic |
| TCAAGATACTTCTGAAGTAC+AGG | 0.489642 | tig0020757:+22448 | Msa1385480:CDS |
| TTTGAAAAGGGCTCAGGCAG+AGG | 0.490294 | tig0020757:+22503 | Msa1385480:CDS |
| AAGTGGGGTGGTGGAATCAT+GGG | 0.491130 | tig0020757:+23151 | Msa1385480:CDS |
| ATCATAAACAATATTACCTC+TGG | 0.492815 | tig0020757:+23402 | Msa1385480:three_prime_UTR |
| AAGCCAGACAACTAATTCAA+TGG | 0.495839 | tig0020757:-22751 | None:intergenic |
| TGAGGACAAGGCTGAGAAGA+AGG | 0.500213 | tig0020757:+22473 | Msa1385480:CDS |
| TTAGTGAACTGGTTCAAAGC+TGG | 0.502229 | tig0020757:-21578 | None:intergenic |
| ATATTGTTTATGATGAATCC+AGG | 0.507235 | tig0020757:-23393 | None:intergenic |
| GAAGTGGCCGAAGAACGTTC+AGG | 0.510705 | tig0020757:+21511 | Msa1385480:CDS |
| ATGACAAGTATGAGGAGTAC+AGG | 0.517239 | tig0020757:+23125 | Msa1385480:CDS |
| AATCTGGTCAAATCCCTCTT+CGG | 0.518321 | tig0020757:-21485 | None:intergenic |
| GAAGTACAGGCCTGAGGACA+AGG | 0.533130 | tig0020757:+22461 | Msa1385480:CDS |
| ACAACAAACTTACACTTCCT+AGG | 0.547646 | tig0020757:-22830 | None:intergenic |
| CAGAATATAACACAACTCCT+AGG | 0.549453 | tig0020757:-23242 | None:intergenic |
| AGGTGCATTGCCACCGAAGA+GGG | 0.550648 | tig0020757:+21472 | Msa1385480:CDS |
| TGCCCTTAACAATACAGTAT+GGG | 0.553243 | tig0020757:-22800 | None:intergenic |
| TTTGGACGCTTCTCAAACAG+CGG | 0.554899 | tig0020757:-21434 | None:intergenic |
| TTGGACGCTTCTCAAACAGC+GGG | 0.558308 | tig0020757:-21433 | None:intergenic |
| CAAACTTACACTTCCTAGGC+GGG | 0.561796 | tig0020757:-22826 | None:intergenic |
| ATTTGACCAGATTCGTGAAG+TGG | 0.563086 | tig0020757:+21495 | Msa1385480:CDS |
| AAATTTCAATGACAAGTATG+AGG | 0.565347 | tig0020757:+23117 | Msa1385480:CDS |
| AGCATTAGCACCAGCAGCAA+TGG | 0.566182 | tig0020757:+21140 | Msa1385480:exon |
| GTGAACTGGTTCAAAGCTGG+TGG | 0.574137 | tig0020757:-21575 | None:intergenic |
| TTCAGGTGCAGAGGAAGAAG+AGG | 0.574820 | tig0020757:+21528 | Msa1385480:CDS |
| AGGGCTCAGGCAGAGGCTGA+GGG | 0.575749 | tig0020757:+22510 | Msa1385480:CDS |
| ATGCCACCTTAATCGCCTCT+AGG | 0.580251 | tig0020757:-23008 | None:intergenic |
| ATGAGCAATCACGACAAGCT+GGG | 0.581861 | tig0020757:-22718 | None:intergenic |
| GTTAAGGGCAAGGCCCGCCT+AGG | 0.589576 | tig0020757:+22813 | Msa1385480:CDS |
| AGTATACGCACCATTGCTGC+TGG | 0.591788 | tig0020757:-21150 | None:intergenic |
| CGAAGAACGTTCAGGTGCAG+AGG | 0.592402 | tig0020757:+21519 | Msa1385480:CDS |
| CCAAGCCAAGACCAAGGCAA+AGG | 0.598075 | tig0020757:+23183 | Msa1385480:CDS |
| GATTTCCATCTTCCTGCACA+AGG | 0.600419 | tig0020757:-22778 | None:intergenic |
| ACGCTTCTCAAACAGCGGGT+TGG | 0.601848 | tig0020757:-21429 | None:intergenic |
| ATACTGTATTGTTAAGGGCA+AGG | 0.604440 | tig0020757:+22803 | Msa1385480:CDS |
| TGAGGTAGGTAACATGATTG+AGG | 0.604638 | tig0020757:-22575 | None:intergenic |
| ACAAGGCTGAGAAGAAGGAG+AGG | 0.612342 | tig0020757:+22478 | Msa1385480:CDS |
| AAAGGAAAGGCTTATTGCCA+AGG | 0.613232 | tig0020757:+23201 | Msa1385480:CDS |
| TGTTACCTACCTCATCGAGC+AGG | 0.615302 | tig0020757:+22584 | Msa1385480:CDS |
| GGCTGCCCAGAGAATGACCT+AGG | 0.616298 | tig0020757:+23225 | Msa1385480:CDS |
| AAGTATCTTGAACAAGCTTG+TGG | 0.617064 | tig0020757:-22436 | None:intergenic |
| CCAAGACCAAGGCAAAGGAA+AGG | 0.622185 | tig0020757:+23188 | Msa1385480:CDS |
| GAGTACAGGAAGAAGTGGGG+TGG | 0.625879 | tig0020757:+23139 | Msa1385480:CDS |
| GAGGAGTACAGGAAGAAGTG+GGG | 0.627370 | tig0020757:+23136 | Msa1385480:CDS |
| CTGGTCAAATCCCTCTTCGG+TGG | 0.631531 | tig0020757:-21482 | None:intergenic |
| GGAGTTCAGCAGGGTCCTAG+AGG | 0.633517 | tig0020757:+22993 | Msa1385480:CDS |
| TACCAAAATTCTGTCGCCAG+AGG | 0.645577 | tig0020757:-23418 | None:intergenic |
| GAGGTGCATTGCCACCGAAG+AGG | 0.649300 | tig0020757:+21471 | Msa1385480:CDS |
| CAACTCCTAGGTCATTCTCT+GGG | 0.652662 | tig0020757:-23230 | None:intergenic |
| GGAAAGGCTTATTGCCAAGG+AGG | 0.665686 | tig0020757:+23204 | Msa1385480:CDS |
| CAAATCCCAAGCCAAGACCA+AGG | 0.672977 | tig0020757:+23177 | Msa1385480:CDS |
| ACAAACTTACACTTCCTAGG+CGG | 0.677034 | tig0020757:-22827 | None:intergenic |
| GAAAGACAACCTGCTCGATG+AGG | 0.683651 | tig0020757:-22593 | None:intergenic |
| GACAACCTGCTCGATGAGGT+AGG | 0.683860 | tig0020757:-22589 | None:intergenic |
| AGACAAAATGGAGTTCAGCA+GGG | 0.687168 | tig0020757:+22984 | Msa1385480:CDS |
| GCTAATGCTCTGTGTCTGTG+CGG | 0.698939 | tig0020757:-21126 | None:intergenic |
| ACTTCTGAAGTACAGGCCTG+AGG | 0.703947 | tig0020757:+22455 | Msa1385480:CDS |
| GCCAGACAACTAATTCAATG+GGG | 0.748421 | tig0020757:-22749 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTATTGTAATGTT+TGG | + | tig0020757:21626-21645 | Msa1385480:intron | 10.0% |
| !!! | TTTTTGTAATATGTTAATTA+TGG | + | tig0020757:21694-21713 | Msa1385480:intron | 10.0% |
| !! | AAATAAATTATTGTAATGTT+TGG | + | tig0020757:21626-21645 | Msa1385480:intron | 10.0% |
| !!! | TTTTTGTAATATGTTAATTA+TGG | + | tig0020757:21694-21713 | Msa1385480:intron | 10.0% |
| !! | GTAAATTGTAAAATTAATAC+AGG | + | tig0020757:21716-21735 | Msa1385480:intron | 15.0% |
| !! | ATTTGAGTAAATAACAAAAT+TGG | - | tig0020757:23281-23300 | None:intergenic | 15.0% |
| !! | GTAAATTGTAAAATTAATAC+AGG | + | tig0020757:21716-21735 | Msa1385480:intron | 15.0% |
| !! | ATTTGAGTAAATAACAAAAT+TGG | - | tig0020757:23281-23300 | None:intergenic | 15.0% |
| !! | GTAAAATTAATACAGGATTT+CGG | + | tig0020757:21723-21742 | Msa1385480:intron | 20.0% |
| !!! | GTTATTTCAAAAGCTTAAAT+GGG | - | tig0020757:22029-22048 | None:intergenic | 20.0% |
| !!! | AGTTATTTCAAAAGCTTAAA+TGG | - | tig0020757:22030-22049 | None:intergenic | 20.0% |
| !! | ATCAGTATATTGTTATATCA+GGG | - | tig0020757:22346-22365 | None:intergenic | 20.0% |
| !! | AATCAGTATATTGTTATATC+AGG | - | tig0020757:22347-22366 | None:intergenic | 20.0% |
| !! | CAGTAAAATAACAAATTAGA+AGG | - | tig0020757:22649-22668 | None:intergenic | 20.0% |
| !! | TTCAGTCATAAATCATATAT+AGG | - | tig0020757:22866-22885 | None:intergenic | 20.0% |
| !! | TGTTAAAAATGAAGACAAAA+TGG | + | tig0020757:22972-22991 | Msa1385480:CDS | 20.0% |
| !! | TAAATAGTAGAGAACAAAAA+TGG | - | tig0020757:23046-23065 | None:intergenic | 20.0% |
| !! | ATAAAACATCTCAGTTTAAA+TGG | - | tig0020757:23079-23098 | None:intergenic | 20.0% |
| !!! | TTTTATGTTGGTTTTATTTC+AGG | + | tig0020757:23093-23112 | Msa1385480:intron | 20.0% |
| !! | TTGAAGAAAAAATAATACTC+CGG | - | tig0020757:23368-23387 | None:intergenic | 20.0% |
| !! | TAAAATCAAATAGTCATAGA+AGG | + | tig0020757:23466-23485 | Msa1385480:three_prime_UTR | 20.0% |
| !! | GTAAAATTAATACAGGATTT+CGG | + | tig0020757:21723-21742 | Msa1385480:intron | 20.0% |
| !!! | GTTATTTCAAAAGCTTAAAT+GGG | - | tig0020757:22029-22048 | None:intergenic | 20.0% |
| !!! | AGTTATTTCAAAAGCTTAAA+TGG | - | tig0020757:22030-22049 | None:intergenic | 20.0% |
| !! | ATCAGTATATTGTTATATCA+GGG | - | tig0020757:22346-22365 | None:intergenic | 20.0% |
| !! | AATCAGTATATTGTTATATC+AGG | - | tig0020757:22347-22366 | None:intergenic | 20.0% |
| !! | CAGTAAAATAACAAATTAGA+AGG | - | tig0020757:22649-22668 | None:intergenic | 20.0% |
| !! | TTCAGTCATAAATCATATAT+AGG | - | tig0020757:22866-22885 | None:intergenic | 20.0% |
| !! | TGTTAAAAATGAAGACAAAA+TGG | + | tig0020757:22972-22991 | Msa1385480:CDS | 20.0% |
| !! | TAAATAGTAGAGAACAAAAA+TGG | - | tig0020757:23046-23065 | None:intergenic | 20.0% |
| !! | ATAAAACATCTCAGTTTAAA+TGG | - | tig0020757:23079-23098 | None:intergenic | 20.0% |
| !!! | TTTTATGTTGGTTTTATTTC+AGG | + | tig0020757:23093-23112 | Msa1385480:intron | 20.0% |
| !! | TTGAAGAAAAAATAATACTC+CGG | - | tig0020757:23368-23387 | None:intergenic | 20.0% |
| !!! | GTATTTGTTTTCAAATTTGC+AGG | + | tig0020757:21397-21416 | Msa1385480:intron | 25.0% |
| ! | AGTTGAAAACAAAATTAAGC+AGG | + | tig0020757:21891-21910 | Msa1385480:intron | 25.0% |
| ! | GTTGAAAACAAAATTAAGCA+GGG | + | tig0020757:21892-21911 | Msa1385480:intron | 25.0% |
| ! | ATTCTATGATTTCATTGCTT+TGG | + | tig0020757:22107-22126 | Msa1385480:intron | 25.0% |
| ! | ATATCAATCTACCATTTCAT+AGG | - | tig0020757:22153-22172 | None:intergenic | 25.0% |
| ! | CGTTTAACAATTATTCGTTA+TGG | + | tig0020757:22280-22299 | Msa1385480:intron | 25.0% |
| ! | TTTATGACTGAATTGAATTC+AGG | + | tig0020757:22874-22893 | Msa1385480:intron | 25.0% |
| !!! | TTTGTCTTCATTTTTAACAG+TGG | - | tig0020757:22971-22990 | None:intergenic | 25.0% |
| !! | TAAACTGAGATGTTTTATGT+TGG | + | tig0020757:23081-23100 | Msa1385480:intron | 25.0% |
| ! | AAATTTCAATGACAAGTATG+AGG | + | tig0020757:23117-23136 | Msa1385480:CDS | 25.0% |
| !!! | ATTGAAGTTTTTTTGTAGTC+TGG | + | tig0020757:23299-23318 | Msa1385480:three_prime_UTR | 25.0% |
| !! | GTAAATAACAAACGTTTTTG+TGG | - | tig0020757:23340-23359 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTCAAGTTATCC+TGG | + | tig0020757:23375-23394 | Msa1385480:three_prime_UTR | 25.0% |
| ! | ATATTGTTTATGATGAATCC+AGG | - | tig0020757:23396-23415 | None:intergenic | 25.0% |
| ! | ATCATAAACAATATTACCTC+TGG | + | tig0020757:23402-23421 | Msa1385480:three_prime_UTR | 25.0% |
| !!! | GTATTTGTTTTCAAATTTGC+AGG | + | tig0020757:21397-21416 | Msa1385480:intron | 25.0% |
| ! | AGTTGAAAACAAAATTAAGC+AGG | + | tig0020757:21891-21910 | Msa1385480:intron | 25.0% |
| ! | GTTGAAAACAAAATTAAGCA+GGG | + | tig0020757:21892-21911 | Msa1385480:intron | 25.0% |
| ! | ATTCTATGATTTCATTGCTT+TGG | + | tig0020757:22107-22126 | Msa1385480:intron | 25.0% |
| ! | ATATCAATCTACCATTTCAT+AGG | - | tig0020757:22153-22172 | None:intergenic | 25.0% |
| ! | CGTTTAACAATTATTCGTTA+TGG | + | tig0020757:22280-22299 | Msa1385480:intron | 25.0% |
| ! | TTTATGACTGAATTGAATTC+AGG | + | tig0020757:22874-22893 | Msa1385480:intron | 25.0% |
| !!! | TTTGTCTTCATTTTTAACAG+TGG | - | tig0020757:22971-22990 | None:intergenic | 25.0% |
| !! | TAAACTGAGATGTTTTATGT+TGG | + | tig0020757:23081-23100 | Msa1385480:intron | 25.0% |
| ! | AAATTTCAATGACAAGTATG+AGG | + | tig0020757:23117-23136 | Msa1385480:CDS | 25.0% |
| !!! | ATTGAAGTTTTTTTGTAGTC+TGG | + | tig0020757:23299-23318 | Msa1385480:three_prime_UTR | 25.0% |
| !! | GTAAATAACAAACGTTTTTG+TGG | - | tig0020757:23340-23359 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTTCAAGTTATCC+TGG | + | tig0020757:23375-23394 | Msa1385480:three_prime_UTR | 25.0% |
| ! | ATATTGTTTATGATGAATCC+AGG | - | tig0020757:23396-23415 | None:intergenic | 25.0% |
| ! | ATCATAAACAATATTACCTC+TGG | + | tig0020757:23402-23421 | Msa1385480:three_prime_UTR | 25.0% |
| ! | TGATAAGTACTGTGAAGAAA+TGG | - | tig0020757:21204-21223 | None:intergenic | 30.0% |
| ! | TTCATCGTGTTTGATTTCTT+AGG | + | tig0020757:21250-21269 | Msa1385480:intron | 30.0% |
| !!! | GATCTGATTTTGATTGCTAT+AGG | + | tig0020757:21648-21667 | Msa1385480:intron | 30.0% |
| ! | GTAGATAAGCTTTTTATCCA+AGG | - | tig0020757:21749-21768 | None:intergenic | 30.0% |
| ! | AACAAAATTAAGCAGGGTTT+TGG | + | tig0020757:21898-21917 | Msa1385480:intron | 30.0% |
| CTTATGCAATAAGCTTCAAA+TGG | - | tig0020757:21924-21943 | None:intergenic | 30.0% | |
| ! | TTTGAAGCTTATTGCATAAG+TGG | + | tig0020757:21924-21943 | Msa1385480:intron | 30.0% |
| GTTATGGTTATATTAGAGTC+TGG | + | tig0020757:22296-22315 | Msa1385480:intron | 30.0% | |
| ! | GAGGCATTACTTTATTAGTT+TGG | + | tig0020757:22318-22337 | Msa1385480:intron | 30.0% |
| AAGCCTATTAATGTGAAGTA+TGG | + | tig0020757:22552-22571 | Msa1385480:CDS | 30.0% | |
| AATCCCATACTGTATTGTTA+AGG | + | tig0020757:22797-22816 | Msa1385480:CDS | 30.0% | |
| ATCCCATACTGTATTGTTAA+GGG | + | tig0020757:22798-22817 | Msa1385480:CDS | 30.0% | |
| TAATCTCTCTACACTTAAAC+AGG | + | tig0020757:22909-22928 | Msa1385480:intron | 30.0% | |
| ! | ACGTTTTTGTGGTGATAATT+AGG | - | tig0020757:23329-23348 | None:intergenic | 30.0% |
| !! | CGTTTGTTATTTACAATAGC+CGG | + | tig0020757:23346-23365 | Msa1385480:three_prime_UTR | 30.0% |
| ! | TGATAAGTACTGTGAAGAAA+TGG | - | tig0020757:21204-21223 | None:intergenic | 30.0% |
| ! | TTCATCGTGTTTGATTTCTT+AGG | + | tig0020757:21250-21269 | Msa1385480:intron | 30.0% |
| !!! | GATCTGATTTTGATTGCTAT+AGG | + | tig0020757:21648-21667 | Msa1385480:intron | 30.0% |
| ! | GTAGATAAGCTTTTTATCCA+AGG | - | tig0020757:21749-21768 | None:intergenic | 30.0% |
| ! | AACAAAATTAAGCAGGGTTT+TGG | + | tig0020757:21898-21917 | Msa1385480:intron | 30.0% |
| CTTATGCAATAAGCTTCAAA+TGG | - | tig0020757:21924-21943 | None:intergenic | 30.0% | |
| ! | TTTGAAGCTTATTGCATAAG+TGG | + | tig0020757:21924-21943 | Msa1385480:intron | 30.0% |
| GTTATGGTTATATTAGAGTC+TGG | + | tig0020757:22296-22315 | Msa1385480:intron | 30.0% | |
| ! | GAGGCATTACTTTATTAGTT+TGG | + | tig0020757:22318-22337 | Msa1385480:intron | 30.0% |
| AAGCCTATTAATGTGAAGTA+TGG | + | tig0020757:22552-22571 | Msa1385480:CDS | 30.0% | |
| AATCCCATACTGTATTGTTA+AGG | + | tig0020757:22797-22816 | Msa1385480:CDS | 30.0% | |
| ATCCCATACTGTATTGTTAA+GGG | + | tig0020757:22798-22817 | Msa1385480:CDS | 30.0% | |
| TAATCTCTCTACACTTAAAC+AGG | + | tig0020757:22909-22928 | Msa1385480:intron | 30.0% | |
| ! | ACGTTTTTGTGGTGATAATT+AGG | - | tig0020757:23329-23348 | None:intergenic | 30.0% |
| !! | CGTTTGTTATTTACAATAGC+CGG | + | tig0020757:23346-23365 | Msa1385480:three_prime_UTR | 30.0% |
| AACGAAGATCTGAATTGAGA+TGG | - | tig0020757:21176-21195 | None:intergenic | 35.0% | |
| ATTTCTTAGGCTCCCAAAAA+AGG | + | tig0020757:21263-21282 | Msa1385480:intron | 35.0% | |
| !!! | GGAGCTTTAACACCTTTTTT+GGG | - | tig0020757:21278-21297 | None:intergenic | 35.0% |
| !!! | TGGAGCTTTAACACCTTTTT+TGG | - | tig0020757:21279-21298 | None:intergenic | 35.0% |
| AAATGAGATTGGAATTGACG+CGG | - | tig0020757:21334-21353 | None:intergenic | 35.0% | |
| TCGAAAGTCGTAAATGAGAT+TGG | - | tig0020757:21345-21364 | None:intergenic | 35.0% | |
| ! | GTTTTCAAATTTGCAGGAGA+AGG | + | tig0020757:21403-21422 | Msa1385480:intron | 35.0% |
| AAAACCCTCGACAAAAATCT+AGG | + | tig0020757:21599-21618 | Msa1385480:CDS | 35.0% | |
| ! | GTTGCTTTCATAAGCTATCT+TGG | + | tig0020757:21852-21871 | Msa1385480:intron | 35.0% |
| ! | TTGCTTTGGTTTCTTTCTAC+TGG | + | tig0020757:22121-22140 | Msa1385480:intron | 35.0% |
| ! | ACTGGTTTCTTCCTATGAAA+TGG | + | tig0020757:22139-22158 | Msa1385480:intron | 35.0% |
| ATGGTTATATTAGAGTCTGG+AGG | + | tig0020757:22299-22318 | Msa1385480:intron | 35.0% | |
| AAGTATCTTGAACAAGCTTG+TGG | - | tig0020757:22439-22458 | None:intergenic | 35.0% | |
| !! | TCAAGATACTTCTGAAGTAC+AGG | + | tig0020757:22448-22467 | Msa1385480:CDS | 35.0% |
| AGGCCATACTTCACATTAAT+AGG | - | tig0020757:22558-22577 | None:intergenic | 35.0% | |
| GAAGGAAAAATCAGCAATCT+TGG | - | tig0020757:22631-22650 | None:intergenic | 35.0% | |
| AGCCAGACAACTAATTCAAT+GGG | - | tig0020757:22753-22772 | None:intergenic | 35.0% | |
| AAGCCAGACAACTAATTCAA+TGG | - | tig0020757:22754-22773 | None:intergenic | 35.0% | |
| TGCCCTTAACAATACAGTAT+GGG | - | tig0020757:22803-22822 | None:intergenic | 35.0% | |
| TTGCCCTTAACAATACAGTA+TGG | - | tig0020757:22804-22823 | None:intergenic | 35.0% | |
| ATACTGTATTGTTAAGGGCA+AGG | + | tig0020757:22803-22822 | Msa1385480:CDS | 35.0% | |
| ACAACAAACTTACACTTCCT+AGG | - | tig0020757:22833-22852 | None:intergenic | 35.0% | |
| ! | AAACAGCAGCAGTTTTCTTA+TGG | - | tig0020757:22939-22958 | None:intergenic | 35.0% |
| CAGAATATAACACAACTCCT+AGG | - | tig0020757:23245-23264 | None:intergenic | 35.0% | |
| AACGAAGATCTGAATTGAGA+TGG | - | tig0020757:21176-21195 | None:intergenic | 35.0% | |
| ATTTCTTAGGCTCCCAAAAA+AGG | + | tig0020757:21263-21282 | Msa1385480:intron | 35.0% | |
| !!! | GGAGCTTTAACACCTTTTTT+GGG | - | tig0020757:21278-21297 | None:intergenic | 35.0% |
| !!! | TGGAGCTTTAACACCTTTTT+TGG | - | tig0020757:21279-21298 | None:intergenic | 35.0% |
| AAATGAGATTGGAATTGACG+CGG | - | tig0020757:21334-21353 | None:intergenic | 35.0% | |
| TCGAAAGTCGTAAATGAGAT+TGG | - | tig0020757:21345-21364 | None:intergenic | 35.0% | |
| ! | GTTTTCAAATTTGCAGGAGA+AGG | + | tig0020757:21403-21422 | Msa1385480:intron | 35.0% |
| AAAACCCTCGACAAAAATCT+AGG | + | tig0020757:21599-21618 | Msa1385480:CDS | 35.0% | |
| ! | GTTGCTTTCATAAGCTATCT+TGG | + | tig0020757:21852-21871 | Msa1385480:intron | 35.0% |
| ! | TTGCTTTGGTTTCTTTCTAC+TGG | + | tig0020757:22121-22140 | Msa1385480:intron | 35.0% |
| ! | ACTGGTTTCTTCCTATGAAA+TGG | + | tig0020757:22139-22158 | Msa1385480:intron | 35.0% |
| ATGGTTATATTAGAGTCTGG+AGG | + | tig0020757:22299-22318 | Msa1385480:intron | 35.0% | |
| AAGTATCTTGAACAAGCTTG+TGG | - | tig0020757:22439-22458 | None:intergenic | 35.0% | |
| !! | TCAAGATACTTCTGAAGTAC+AGG | + | tig0020757:22448-22467 | Msa1385480:CDS | 35.0% |
| AGGCCATACTTCACATTAAT+AGG | - | tig0020757:22558-22577 | None:intergenic | 35.0% | |
| GAAGGAAAAATCAGCAATCT+TGG | - | tig0020757:22631-22650 | None:intergenic | 35.0% | |
| AGCCAGACAACTAATTCAAT+GGG | - | tig0020757:22753-22772 | None:intergenic | 35.0% | |
| AAGCCAGACAACTAATTCAA+TGG | - | tig0020757:22754-22773 | None:intergenic | 35.0% | |
| TGCCCTTAACAATACAGTAT+GGG | - | tig0020757:22803-22822 | None:intergenic | 35.0% | |
| TTGCCCTTAACAATACAGTA+TGG | - | tig0020757:22804-22823 | None:intergenic | 35.0% | |
| ATACTGTATTGTTAAGGGCA+AGG | + | tig0020757:22803-22822 | Msa1385480:CDS | 35.0% | |
| ACAACAAACTTACACTTCCT+AGG | - | tig0020757:22833-22852 | None:intergenic | 35.0% | |
| ! | AAACAGCAGCAGTTTTCTTA+TGG | - | tig0020757:22939-22958 | None:intergenic | 35.0% |
| CAGAATATAACACAACTCCT+AGG | - | tig0020757:23245-23264 | None:intergenic | 35.0% | |
| !! | TTCTTCTTTGAAGCTGCAAC+TGG | - | tig0020757:21299-21318 | None:intergenic | 40.0% |
| ! | CGTCCAAAGCAATTTGGAAT+TGG | + | tig0020757:21449-21468 | Msa1385480:CDS | 40.0% |
| CCTCCAATTCCAAATTGCTT+TGG | - | tig0020757:21455-21474 | None:intergenic | 40.0% | |
| ! | CCAAAGCAATTTGGAATTGG+AGG | + | tig0020757:21452-21471 | Msa1385480:CDS | 40.0% |
| AATCTGGTCAAATCCCTCTT+CGG | - | tig0020757:21488-21507 | None:intergenic | 40.0% | |
| ATTTGACCAGATTCGTGAAG+TGG | + | tig0020757:21495-21514 | Msa1385480:CDS | 40.0% | |
| !!! | AGAAGAGGATTTTGAAGCAG+AGG | + | tig0020757:21543-21562 | Msa1385480:CDS | 40.0% |
| !!! | GATTTTGAAGCAGAGGTTGA+AGG | + | tig0020757:21550-21569 | Msa1385480:CDS | 40.0% |
| ! | TTAGTGAACTGGTTCAAAGC+TGG | - | tig0020757:21581-21600 | None:intergenic | 40.0% |
| ! | CTGACCTAGATTTTTGTCGA+GGG | - | tig0020757:21606-21625 | None:intergenic | 40.0% |
| ! | TCTGACCTAGATTTTTGTCG+AGG | - | tig0020757:21607-21626 | None:intergenic | 40.0% |
| TTAATACAGGATTTCGGCCT+TGG | + | tig0020757:21729-21748 | Msa1385480:intron | 40.0% | |
| ! | GCTTTAAGCTACAACGTGTA+TGG | - | tig0020757:22230-22249 | None:intergenic | 40.0% |
| !! | AGAAGGAGAGGCTTTTGAAA+AGG | + | tig0020757:22490-22509 | Msa1385480:CDS | 40.0% |
| !! | GAAGGAGAGGCTTTTGAAAA+GGG | + | tig0020757:22491-22510 | Msa1385480:CDS | 40.0% |
| TGAGGTAGGTAACATGATTG+AGG | - | tig0020757:22578-22597 | None:intergenic | 40.0% | |
| ACCCCATTGAATTAGTTGTC+TGG | + | tig0020757:22748-22767 | Msa1385480:CDS | 40.0% | |
| GCCAGACAACTAATTCAATG+GGG | - | tig0020757:22752-22771 | None:intergenic | 40.0% | |
| ACAAACTTACACTTCCTAGG+CGG | - | tig0020757:22830-22849 | None:intergenic | 40.0% | |
| AAGACAAAATGGAGTTCAGC+AGG | + | tig0020757:22983-23002 | Msa1385480:CDS | 40.0% | |
| AGACAAAATGGAGTTCAGCA+GGG | + | tig0020757:22984-23003 | Msa1385480:CDS | 40.0% | |
| ! | ATGACAAGTATGAGGAGTAC+AGG | + | tig0020757:23125-23144 | Msa1385480:CDS | 40.0% |
| AATAAGCCTTTCCTTTGCCT+TGG | - | tig0020757:23197-23216 | None:intergenic | 40.0% | |
| AAAGGAAAGGCTTATTGCCA+AGG | + | tig0020757:23201-23220 | Msa1385480:CDS | 40.0% | |
| !! | TTCTTCTTTGAAGCTGCAAC+TGG | - | tig0020757:21299-21318 | None:intergenic | 40.0% |
| ! | CGTCCAAAGCAATTTGGAAT+TGG | + | tig0020757:21449-21468 | Msa1385480:CDS | 40.0% |
| CCTCCAATTCCAAATTGCTT+TGG | - | tig0020757:21455-21474 | None:intergenic | 40.0% | |
| ! | CCAAAGCAATTTGGAATTGG+AGG | + | tig0020757:21452-21471 | Msa1385480:CDS | 40.0% |
| AATCTGGTCAAATCCCTCTT+CGG | - | tig0020757:21488-21507 | None:intergenic | 40.0% | |
| ATTTGACCAGATTCGTGAAG+TGG | + | tig0020757:21495-21514 | Msa1385480:CDS | 40.0% | |
| !!! | AGAAGAGGATTTTGAAGCAG+AGG | + | tig0020757:21543-21562 | Msa1385480:CDS | 40.0% |
| !!! | GATTTTGAAGCAGAGGTTGA+AGG | + | tig0020757:21550-21569 | Msa1385480:CDS | 40.0% |
| ! | TTAGTGAACTGGTTCAAAGC+TGG | - | tig0020757:21581-21600 | None:intergenic | 40.0% |
| ! | CTGACCTAGATTTTTGTCGA+GGG | - | tig0020757:21606-21625 | None:intergenic | 40.0% |
| ! | TCTGACCTAGATTTTTGTCG+AGG | - | tig0020757:21607-21626 | None:intergenic | 40.0% |
| TTAATACAGGATTTCGGCCT+TGG | + | tig0020757:21729-21748 | Msa1385480:intron | 40.0% | |
| ! | GCTTTAAGCTACAACGTGTA+TGG | - | tig0020757:22230-22249 | None:intergenic | 40.0% |
| !! | AGAAGGAGAGGCTTTTGAAA+AGG | + | tig0020757:22490-22509 | Msa1385480:CDS | 40.0% |
| !! | GAAGGAGAGGCTTTTGAAAA+GGG | + | tig0020757:22491-22510 | Msa1385480:CDS | 40.0% |
| TGAGGTAGGTAACATGATTG+AGG | - | tig0020757:22578-22597 | None:intergenic | 40.0% | |
| ACCCCATTGAATTAGTTGTC+TGG | + | tig0020757:22748-22767 | Msa1385480:CDS | 40.0% | |
| GCCAGACAACTAATTCAATG+GGG | - | tig0020757:22752-22771 | None:intergenic | 40.0% | |
| ACAAACTTACACTTCCTAGG+CGG | - | tig0020757:22830-22849 | None:intergenic | 40.0% | |
| AAGACAAAATGGAGTTCAGC+AGG | + | tig0020757:22983-23002 | Msa1385480:CDS | 40.0% | |
| AGACAAAATGGAGTTCAGCA+GGG | + | tig0020757:22984-23003 | Msa1385480:CDS | 40.0% | |
| ! | ATGACAAGTATGAGGAGTAC+AGG | + | tig0020757:23125-23144 | Msa1385480:CDS | 40.0% |
| AATAAGCCTTTCCTTTGCCT+TGG | - | tig0020757:23197-23216 | None:intergenic | 40.0% | |
| AAAGGAAAGGCTTATTGCCA+AGG | + | tig0020757:23201-23220 | Msa1385480:CDS | 40.0% | |
| GAATTGACGCGGTTACTTAC+AGG | - | tig0020757:21323-21342 | None:intergenic | 45.0% | |
| TTTGGACGCTTCTCAAACAG+CGG | - | tig0020757:21437-21456 | None:intergenic | 45.0% | |
| !! | GAGAAGCGTCCAAAGCAATT+TGG | + | tig0020757:21443-21462 | Msa1385480:CDS | 45.0% |
| !! | TGTCGAGGGTTTTAGTGAAC+TGG | - | tig0020757:21592-21611 | None:intergenic | 45.0% |
| TGCATGTGCTGCATAAATGC+TGG | + | tig0020757:22082-22101 | Msa1385480:intron | 45.0% | |
| ATGAGCAATCACGACAAGCT+GGG | - | tig0020757:22721-22740 | None:intergenic | 45.0% | |
| GATTTCCATCTTCCTGCACA+AGG | - | tig0020757:22781-22800 | None:intergenic | 45.0% | |
| CAAACTTACACTTCCTAGGC+GGG | - | tig0020757:22829-22848 | None:intergenic | 45.0% | |
| ! | ATGAGGAGTACAGGAAGAAG+TGG | + | tig0020757:23134-23153 | Msa1385480:CDS | 45.0% |
| ! | TGAGGAGTACAGGAAGAAGT+GGG | + | tig0020757:23135-23154 | Msa1385480:CDS | 45.0% |
| CAACTCCTAGGTCATTCTCT+GGG | - | tig0020757:23233-23252 | None:intergenic | 45.0% | |
| ACAACTCCTAGGTCATTCTC+TGG | - | tig0020757:23234-23253 | None:intergenic | 45.0% | |
| ! | TACCTCTGGCGACAGAATTT+TGG | + | tig0020757:23416-23435 | Msa1385480:three_prime_UTR | 45.0% |
| TACCAAAATTCTGTCGCCAG+AGG | - | tig0020757:23421-23440 | None:intergenic | 45.0% | |
| GAATTGACGCGGTTACTTAC+AGG | - | tig0020757:21323-21342 | None:intergenic | 45.0% | |
| TTTGGACGCTTCTCAAACAG+CGG | - | tig0020757:21437-21456 | None:intergenic | 45.0% | |
| !! | GAGAAGCGTCCAAAGCAATT+TGG | + | tig0020757:21443-21462 | Msa1385480:CDS | 45.0% |
| !! | TGTCGAGGGTTTTAGTGAAC+TGG | - | tig0020757:21592-21611 | None:intergenic | 45.0% |
| TGCATGTGCTGCATAAATGC+TGG | + | tig0020757:22082-22101 | Msa1385480:intron | 45.0% | |
| ATGAGCAATCACGACAAGCT+GGG | - | tig0020757:22721-22740 | None:intergenic | 45.0% | |
| GATTTCCATCTTCCTGCACA+AGG | - | tig0020757:22781-22800 | None:intergenic | 45.0% | |
| CAAACTTACACTTCCTAGGC+GGG | - | tig0020757:22829-22848 | None:intergenic | 45.0% | |
| ! | ATGAGGAGTACAGGAAGAAG+TGG | + | tig0020757:23134-23153 | Msa1385480:CDS | 45.0% |
| ! | TGAGGAGTACAGGAAGAAGT+GGG | + | tig0020757:23135-23154 | Msa1385480:CDS | 45.0% |
| CAACTCCTAGGTCATTCTCT+GGG | - | tig0020757:23233-23252 | None:intergenic | 45.0% | |
| ACAACTCCTAGGTCATTCTC+TGG | - | tig0020757:23234-23253 | None:intergenic | 45.0% | |
| ! | TACCTCTGGCGACAGAATTT+TGG | + | tig0020757:23416-23435 | Msa1385480:three_prime_UTR | 45.0% |
| TACCAAAATTCTGTCGCCAG+AGG | - | tig0020757:23421-23440 | None:intergenic | 45.0% | |
| GCTAATGCTCTGTGTCTGTG+CGG | - | tig0020757:21129-21148 | None:intergenic | 50.0% | |
| AGCATTAGCACCAGCAGCAA+TGG | + | tig0020757:21140-21159 | Msa1385480:exon | 50.0% | |
| AGTATACGCACCATTGCTGC+TGG | - | tig0020757:21153-21172 | None:intergenic | 50.0% | |
| TTGGACGCTTCTCAAACAGC+GGG | - | tig0020757:21436-21455 | None:intergenic | 50.0% | |
| CTCTGCACCTGAACGTTCTT+CGG | - | tig0020757:21521-21540 | None:intergenic | 50.0% | |
| TTCAGGTGCAGAGGAAGAAG+AGG | + | tig0020757:21528-21547 | Msa1385480:CDS | 50.0% | |
| ! | GTGAACTGGTTCAAAGCTGG+TGG | - | tig0020757:21578-21597 | None:intergenic | 50.0% |
| !! | ACTTCTGAAGTACAGGCCTG+AGG | + | tig0020757:22455-22474 | Msa1385480:CDS | 50.0% |
| ! | TTCTTCTCAGCCTTGTCCTC+AGG | - | tig0020757:22474-22493 | None:intergenic | 50.0% |
| TGAGGACAAGGCTGAGAAGA+AGG | + | tig0020757:22473-22492 | Msa1385480:CDS | 50.0% | |
| ACAAGGCTGAGAAGAAGGAG+AGG | + | tig0020757:22478-22497 | Msa1385480:CDS | 50.0% | |
| !! | GAGGCTTTTGAAAAGGGCTC+AGG | + | tig0020757:22497-22516 | Msa1385480:CDS | 50.0% |
| TTTGAAAAGGGCTCAGGCAG+AGG | + | tig0020757:22503-22522 | Msa1385480:CDS | 50.0% | |
| TGTTACCTACCTCATCGAGC+AGG | + | tig0020757:22584-22603 | Msa1385480:CDS | 50.0% | |
| GAAAGACAACCTGCTCGATG+AGG | - | tig0020757:22596-22615 | None:intergenic | 50.0% | |
| CATGAGCAATCACGACAAGC+TGG | - | tig0020757:22722-22741 | None:intergenic | 50.0% | |
| ATGCCACCTTAATCGCCTCT+AGG | - | tig0020757:23011-23030 | None:intergenic | 50.0% | |
| ! | GAGGAGTACAGGAAGAAGTG+GGG | + | tig0020757:23136-23155 | Msa1385480:CDS | 50.0% |
| !! | AAGTGGGGTGGTGGAATCAT+GGG | + | tig0020757:23151-23170 | Msa1385480:CDS | 50.0% |
| !! | CTTGGTCTTGGCTTGGGATT+TGG | - | tig0020757:23179-23198 | None:intergenic | 50.0% |
| CAAATCCCAAGCCAAGACCA+AGG | + | tig0020757:23177-23196 | Msa1385480:CDS | 50.0% | |
| !! | CTTTGCCTTGGTCTTGGCTT+GGG | - | tig0020757:23185-23204 | None:intergenic | 50.0% |
| CCTTTCCTTTGCCTTGGTCT+TGG | - | tig0020757:23191-23210 | None:intergenic | 50.0% | |
| CCAAGACCAAGGCAAAGGAA+AGG | + | tig0020757:23188-23207 | Msa1385480:CDS | 50.0% | |
| GGAAAGGCTTATTGCCAAGG+AGG | + | tig0020757:23204-23223 | Msa1385480:CDS | 50.0% | |
| GCTAATGCTCTGTGTCTGTG+CGG | - | tig0020757:21129-21148 | None:intergenic | 50.0% | |
| AGCATTAGCACCAGCAGCAA+TGG | + | tig0020757:21140-21159 | Msa1385480:exon | 50.0% | |
| AGTATACGCACCATTGCTGC+TGG | - | tig0020757:21153-21172 | None:intergenic | 50.0% | |
| TTGGACGCTTCTCAAACAGC+GGG | - | tig0020757:21436-21455 | None:intergenic | 50.0% | |
| CTCTGCACCTGAACGTTCTT+CGG | - | tig0020757:21521-21540 | None:intergenic | 50.0% | |
| TTCAGGTGCAGAGGAAGAAG+AGG | + | tig0020757:21528-21547 | Msa1385480:CDS | 50.0% | |
| ! | GTGAACTGGTTCAAAGCTGG+TGG | - | tig0020757:21578-21597 | None:intergenic | 50.0% |
| !! | ACTTCTGAAGTACAGGCCTG+AGG | + | tig0020757:22455-22474 | Msa1385480:CDS | 50.0% |
| ! | TTCTTCTCAGCCTTGTCCTC+AGG | - | tig0020757:22474-22493 | None:intergenic | 50.0% |
| TGAGGACAAGGCTGAGAAGA+AGG | + | tig0020757:22473-22492 | Msa1385480:CDS | 50.0% | |
| ACAAGGCTGAGAAGAAGGAG+AGG | + | tig0020757:22478-22497 | Msa1385480:CDS | 50.0% | |
| !! | GAGGCTTTTGAAAAGGGCTC+AGG | + | tig0020757:22497-22516 | Msa1385480:CDS | 50.0% |
| TTTGAAAAGGGCTCAGGCAG+AGG | + | tig0020757:22503-22522 | Msa1385480:CDS | 50.0% | |
| TGTTACCTACCTCATCGAGC+AGG | + | tig0020757:22584-22603 | Msa1385480:CDS | 50.0% | |
| GAAAGACAACCTGCTCGATG+AGG | - | tig0020757:22596-22615 | None:intergenic | 50.0% | |
| CATGAGCAATCACGACAAGC+TGG | - | tig0020757:22722-22741 | None:intergenic | 50.0% | |
| ATGCCACCTTAATCGCCTCT+AGG | - | tig0020757:23011-23030 | None:intergenic | 50.0% | |
| ! | GAGGAGTACAGGAAGAAGTG+GGG | + | tig0020757:23136-23155 | Msa1385480:CDS | 50.0% |
| !! | AAGTGGGGTGGTGGAATCAT+GGG | + | tig0020757:23151-23170 | Msa1385480:CDS | 50.0% |
| !! | CTTGGTCTTGGCTTGGGATT+TGG | - | tig0020757:23179-23198 | None:intergenic | 50.0% |
| CAAATCCCAAGCCAAGACCA+AGG | + | tig0020757:23177-23196 | Msa1385480:CDS | 50.0% | |
| !! | CTTTGCCTTGGTCTTGGCTT+GGG | - | tig0020757:23185-23204 | None:intergenic | 50.0% |
| CCTTTCCTTTGCCTTGGTCT+TGG | - | tig0020757:23191-23210 | None:intergenic | 50.0% | |
| CCAAGACCAAGGCAAAGGAA+AGG | + | tig0020757:23188-23207 | Msa1385480:CDS | 50.0% | |
| GGAAAGGCTTATTGCCAAGG+AGG | + | tig0020757:23204-23223 | Msa1385480:CDS | 50.0% | |
| ACGCTTCTCAAACAGCGGGT+TGG | - | tig0020757:21432-21451 | None:intergenic | 55.0% | |
| AGGTGCATTGCCACCGAAGA+GGG | + | tig0020757:21472-21491 | Msa1385480:CDS | 55.0% | |
| CTGGTCAAATCCCTCTTCGG+TGG | - | tig0020757:21485-21504 | None:intergenic | 55.0% | |
| CTTCGGCCACTTCACGAATC+TGG | - | tig0020757:21504-21523 | None:intergenic | 55.0% | |
| GAAGTGGCCGAAGAACGTTC+AGG | + | tig0020757:21511-21530 | Msa1385480:CDS | 55.0% | |
| CGAAGAACGTTCAGGTGCAG+AGG | + | tig0020757:21519-21538 | Msa1385480:CDS | 55.0% | |
| GAACAAGCTTGTGGCTGCAG+AGG | - | tig0020757:22430-22449 | None:intergenic | 55.0% | |
| GAAGTACAGGCCTGAGGACA+AGG | + | tig0020757:22461-22480 | Msa1385480:CDS | 55.0% | |
| GACAACCTGCTCGATGAGGT+AGG | - | tig0020757:22592-22611 | None:intergenic | 55.0% | |
| ! | TCCAGCCTTGTGCAGGAAGA+TGG | + | tig0020757:22773-22792 | Msa1385480:CDS | 55.0% |
| TCCATCTTCCTGCACAAGGC+TGG | - | tig0020757:22777-22796 | None:intergenic | 55.0% | |
| CAGGGTCCTAGAGGCGATTA+AGG | + | tig0020757:23002-23021 | Msa1385480:CDS | 55.0% | |
| GGTCCTAGAGGCGATTAAGG+TGG | + | tig0020757:23005-23024 | Msa1385480:intron | 55.0% | |
| GAGTACAGGAAGAAGTGGGG+TGG | + | tig0020757:23139-23158 | Msa1385480:CDS | 55.0% | |
| TACAGGAAGAAGTGGGGTGG+TGG | + | tig0020757:23142-23161 | Msa1385480:CDS | 55.0% | |
| !! | GAAGTGGGGTGGTGGAATCA+TGG | + | tig0020757:23150-23169 | Msa1385480:CDS | 55.0% |
| !! | CCTTTGCCTTGGTCTTGGCT+TGG | - | tig0020757:23186-23205 | None:intergenic | 55.0% |
| CCAAGCCAAGACCAAGGCAA+AGG | + | tig0020757:23183-23202 | Msa1385480:CDS | 55.0% | |
| ACGCTTCTCAAACAGCGGGT+TGG | - | tig0020757:21432-21451 | None:intergenic | 55.0% | |
| AGGTGCATTGCCACCGAAGA+GGG | + | tig0020757:21472-21491 | Msa1385480:CDS | 55.0% | |
| CTGGTCAAATCCCTCTTCGG+TGG | - | tig0020757:21485-21504 | None:intergenic | 55.0% | |
| CTTCGGCCACTTCACGAATC+TGG | - | tig0020757:21504-21523 | None:intergenic | 55.0% | |
| GAAGTGGCCGAAGAACGTTC+AGG | + | tig0020757:21511-21530 | Msa1385480:CDS | 55.0% | |
| CGAAGAACGTTCAGGTGCAG+AGG | + | tig0020757:21519-21538 | Msa1385480:CDS | 55.0% | |
| GAACAAGCTTGTGGCTGCAG+AGG | - | tig0020757:22430-22449 | None:intergenic | 55.0% | |
| GAAGTACAGGCCTGAGGACA+AGG | + | tig0020757:22461-22480 | Msa1385480:CDS | 55.0% | |
| GACAACCTGCTCGATGAGGT+AGG | - | tig0020757:22592-22611 | None:intergenic | 55.0% | |
| ! | TCCAGCCTTGTGCAGGAAGA+TGG | + | tig0020757:22773-22792 | Msa1385480:CDS | 55.0% |
| TCCATCTTCCTGCACAAGGC+TGG | - | tig0020757:22777-22796 | None:intergenic | 55.0% | |
| CAGGGTCCTAGAGGCGATTA+AGG | + | tig0020757:23002-23021 | Msa1385480:CDS | 55.0% | |
| GGTCCTAGAGGCGATTAAGG+TGG | + | tig0020757:23005-23024 | Msa1385480:intron | 55.0% | |
| GAGTACAGGAAGAAGTGGGG+TGG | + | tig0020757:23139-23158 | Msa1385480:CDS | 55.0% | |
| TACAGGAAGAAGTGGGGTGG+TGG | + | tig0020757:23142-23161 | Msa1385480:CDS | 55.0% | |
| !! | GAAGTGGGGTGGTGGAATCA+TGG | + | tig0020757:23150-23169 | Msa1385480:CDS | 55.0% |
| !! | CCTTTGCCTTGGTCTTGGCT+TGG | - | tig0020757:23186-23205 | None:intergenic | 55.0% |
| CCAAGCCAAGACCAAGGCAA+AGG | + | tig0020757:23183-23202 | Msa1385480:CDS | 55.0% | |
| GAGGTGCATTGCCACCGAAG+AGG | + | tig0020757:21471-21490 | Msa1385480:CDS | 60.0% | |
| ! | TCTGGCTTCCAGCCTTGTGC+AGG | + | tig0020757:22766-22785 | Msa1385480:CDS | 60.0% |
| GGAGTTCAGCAGGGTCCTAG+AGG | + | tig0020757:22993-23012 | Msa1385480:CDS | 60.0% | |
| CATTCTCTGGGCAGCCTCCT+TGG | - | tig0020757:23221-23240 | None:intergenic | 60.0% | |
| GGCTGCCCAGAGAATGACCT+AGG | + | tig0020757:23225-23244 | Msa1385480:CDS | 60.0% | |
| GAGGTGCATTGCCACCGAAG+AGG | + | tig0020757:21471-21490 | Msa1385480:CDS | 60.0% | |
| ! | TCTGGCTTCCAGCCTTGTGC+AGG | + | tig0020757:22766-22785 | Msa1385480:CDS | 60.0% |
| GGAGTTCAGCAGGGTCCTAG+AGG | + | tig0020757:22993-23012 | Msa1385480:CDS | 60.0% | |
| CATTCTCTGGGCAGCCTCCT+TGG | - | tig0020757:23221-23240 | None:intergenic | 60.0% | |
| GGCTGCCCAGAGAATGACCT+AGG | + | tig0020757:23225-23244 | Msa1385480:CDS | 60.0% | |
| AAGGGCTCAGGCAGAGGCTG+AGG | + | tig0020757:22509-22528 | Msa1385480:CDS | 65.0% | |
| AGGGCTCAGGCAGAGGCTGA+GGG | + | tig0020757:22510-22529 | Msa1385480:CDS | 65.0% | |
| GTTAAGGGCAAGGCCCGCCT+AGG | + | tig0020757:22813-22832 | Msa1385480:CDS | 65.0% | |
| AAGGGCTCAGGCAGAGGCTG+AGG | + | tig0020757:22509-22528 | Msa1385480:CDS | 65.0% | |
| AGGGCTCAGGCAGAGGCTGA+GGG | + | tig0020757:22510-22529 | Msa1385480:CDS | 65.0% | |
| GTTAAGGGCAAGGCCCGCCT+AGG | + | tig0020757:22813-22832 | Msa1385480:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020757 | gene | 21098 | 23485 | 21098 | ID=Msa1385480;Name=Msa1385480 |
| tig0020757 | mRNA | 21098 | 23485 | 21098 | ID=Msa1385480-mRNA-1;Parent=Msa1385480;Name=Msa1385480-mRNA-1;_AED=0.09;_eAED=0.09;_QI=61|1|1|1|1|1|7|239|259 |
| tig0020757 | exon | 21098 | 21161 | 21098 | ID=Msa1385480-mRNA-1:exon:9614;Parent=Msa1385480-mRNA-1 |
| tig0020757 | exon | 21272 | 21322 | 21272 | ID=Msa1385480-mRNA-1:exon:9615;Parent=Msa1385480-mRNA-1 |
| tig0020757 | exon | 21419 | 21620 | 21419 | ID=Msa1385480-mRNA-1:exon:9616;Parent=Msa1385480-mRNA-1 |
| tig0020757 | exon | 22436 | 22605 | 22436 | ID=Msa1385480-mRNA-1:exon:9617;Parent=Msa1385480-mRNA-1 |
| tig0020757 | exon | 22711 | 22839 | 22711 | ID=Msa1385480-mRNA-1:exon:9618;Parent=Msa1385480-mRNA-1 |
| tig0020757 | exon | 22931 | 23023 | 22931 | ID=Msa1385480-mRNA-1:exon:9619;Parent=Msa1385480-mRNA-1 |
| tig0020757 | exon | 23115 | 23485 | 23115 | ID=Msa1385480-mRNA-1:exon:9620;Parent=Msa1385480-mRNA-1 |
| tig0020757 | five_prime_UTR | 21098 | 21158 | 21098 | ID=Msa1385480-mRNA-1:five_prime_utr;Parent=Msa1385480-mRNA-1 |
| tig0020757 | CDS | 21159 | 21161 | 21159 | ID=Msa1385480-mRNA-1:cds;Parent=Msa1385480-mRNA-1 |
| tig0020757 | CDS | 21272 | 21322 | 21272 | ID=Msa1385480-mRNA-1:cds;Parent=Msa1385480-mRNA-1 |
| tig0020757 | CDS | 21419 | 21620 | 21419 | ID=Msa1385480-mRNA-1:cds;Parent=Msa1385480-mRNA-1 |
| tig0020757 | CDS | 22436 | 22605 | 22436 | ID=Msa1385480-mRNA-1:cds;Parent=Msa1385480-mRNA-1 |
| tig0020757 | CDS | 22711 | 22839 | 22711 | ID=Msa1385480-mRNA-1:cds;Parent=Msa1385480-mRNA-1 |
| tig0020757 | CDS | 22931 | 23023 | 22931 | ID=Msa1385480-mRNA-1:cds;Parent=Msa1385480-mRNA-1 |
| tig0020757 | CDS | 23115 | 23246 | 23115 | ID=Msa1385480-mRNA-1:cds;Parent=Msa1385480-mRNA-1 |
| tig0020757 | three_prime_UTR | 23247 | 23485 | 23247 | ID=Msa1385480-mRNA-1:three_prime_utr;Parent=Msa1385480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
