Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563540 | XP_003604568.1 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563540 | sp|P46300|RS4_SOLTU | 91.288 | 264 | 23 | 0 | 1 | 264 | 1 | 264 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563540 | G7JLT2 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0116600 | Msa0563540 | 0.813669 | 2.277081e-51 | -8.615850e-47 |
| Msa0116690 | Msa0563540 | 0.810862 | 9.334735e-51 | -8.615850e-47 |
| Msa0132460 | Msa0563540 | 0.820808 | 5.640644e-53 | -8.615850e-47 |
| Msa0182050 | Msa0563540 | 0.824691 | 7.037645e-54 | -8.615850e-47 |
| Msa0182100 | Msa0563540 | 0.805595 | 1.237121e-49 | -8.615850e-47 |
| Msa0192300 | Msa0563540 | 0.835334 | 1.783043e-56 | -8.615850e-47 |
| Msa0426940 | Msa0563540 | 0.805797 | 1.122276e-49 | -8.615850e-47 |
| Msa0482560 | Msa0563540 | 0.810409 | 1.169213e-50 | -8.615850e-47 |
| Msa0270160 | Msa0563540 | 0.821458 | 3.995532e-53 | -8.615850e-47 |
| Msa0301250 | Msa0563540 | 0.832651 | 8.371031e-56 | -8.615850e-47 |
| Msa0313060 | Msa0563540 | 0.825482 | 4.576879e-54 | -8.615850e-47 |
| Msa0515110 | Msa0563540 | 0.801792 | 7.618691e-49 | -8.615850e-47 |
| Msa0563540 | Msa0573550 | 0.802846 | 4.621754e-49 | -8.615850e-47 |
| Msa0563540 | Msa0578010 | 0.834854 | 2.356030e-56 | -8.615850e-47 |
| Msa0563540 | Msa0589160 | 0.990233 | 1.128135e-181 | -8.615850e-47 |
| Msa0563540 | Msa0629280 | 0.862844 | 3.798802e-64 | -8.615850e-47 |
| Msa0563540 | Msa0656450 | 0.808181 | 3.513119e-50 | -8.615850e-47 |
| Msa0563540 | Msa0667110 | 0.933850 | 9.996114e-96 | -8.615850e-47 |
| Msa0563540 | Msa0708630 | 0.823085 | 1.674652e-53 | -8.615850e-47 |
| Msa0563540 | Msa0718560 | 0.801309 | 9.566967e-49 | -8.615850e-47 |
| Msa0563540 | Msa0930100 | 0.835735 | 1.411031e-56 | -8.615850e-47 |
| Msa0563540 | Msa0930360 | 0.836437 | 9.363325e-57 | -8.615850e-47 |
| Msa0563540 | Msa0930790 | 0.801248 | 9.849333e-49 | -8.615850e-47 |
| Msa0563540 | Msa1126690 | 0.831497 | 1.614178e-55 | -8.615850e-47 |
| Msa0563540 | Msa1255830 | 0.805727 | 1.160997e-49 | -8.615850e-47 |
| Msa0563540 | Msa1317390 | 0.806543 | 7.818269e-50 | -8.615850e-47 |
| Msa0563540 | Msa1403520 | 0.810369 | 1.192869e-50 | -8.615850e-47 |
| Msa0563540 | Msa1413570 | 0.813482 | 2.502569e-51 | -8.615850e-47 |
| Msa0563540 | Msa1424570 | 0.817141 | 3.845430e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563540 | MtrunA17_Chr4g0005611 | 100.000 | 264 | 0 | 0 | 1 | 264 | 1 | 264 | 0.0 | 543 |
| Msa0563540 | MtrunA17_Chr7g0243211 | 96.863 | 255 | 8 | 0 | 1 | 255 | 1 | 255 | 0.0 | 510 |
| Msa0563540 | MtrunA17_Chr5g0403311 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| Msa0563540 | MtrunA17_Chr8g0357951 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563540 | AT2G17360.1 | 91.188 | 261 | 23 | 0 | 1 | 261 | 1 | 261 | 0.0 | 507 |
| Msa0563540 | AT5G07090.1 | 90.840 | 262 | 24 | 0 | 1 | 262 | 1 | 262 | 0.0 | 507 |
| Msa0563540 | AT5G58420.1 | 90.840 | 262 | 24 | 0 | 1 | 262 | 1 | 262 | 0.0 | 507 |
| Msa0563540 | AT5G07090.3 | 90.909 | 242 | 22 | 0 | 19 | 260 | 1 | 242 | 7.79e-170 | 469 |
| Msa0563540 | AT5G07090.2 | 90.909 | 242 | 22 | 0 | 19 | 260 | 1 | 242 | 7.79e-170 | 469 |
| Msa0563540 | AT2G17360.2 | 91.713 | 181 | 15 | 0 | 1 | 181 | 1 | 181 | 2.07e-125 | 354 |
Find 101 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATTGAAAGCATGTTATT+AGG | 0.176407 | 4_1:+63910393 | Msa0563540:three_prime_UTR |
| AATTGCCTTTACAAATATTA+TGG | 0.233312 | 4_1:+63910275 | Msa0563540:three_prime_UTR |
| TTGATCCGTTGTACAAACTA+TGG | 0.301620 | 4_1:+63910366 | Msa0563540:three_prime_UTR |
| GAATTGAAAGCATGTTATTA+GGG | 0.311610 | 4_1:+63910394 | Msa0563540:three_prime_UTR |
| AAAATTTAGAAGAAAATAAT+AGG | 0.317551 | 4_1:-63910313 | None:intergenic |
| TTGTCAAGCATCCAATGTTT+TGG | 0.326410 | 4_1:-63908616 | None:intergenic |
| CTATCCAGATCCACTAATTA+AGG | 0.332244 | 4_1:+63909778 | Msa0563540:CDS |
| GACATATCCCGCTGGTTTCA+TGG | 0.336653 | 4_1:+63908909 | Msa0563540:CDS |
| CAGCGTCATGTTCTTGTTGA+TGG | 0.345107 | 4_1:+63908868 | Msa0563540:CDS |
| TTGGGCAATGTGTTTACTAT+TGG | 0.359690 | 4_1:+63909998 | Msa0563540:CDS |
| GGGAATGTTGTCATGGTTAC+CGG | 0.387189 | 4_1:+63909866 | Msa0563540:CDS |
| GCGGATGGTGCGACCATCAT+AGG | 0.388644 | 4_1:-63909756 | None:intergenic |
| TTGGCCTTAATTAGTGGATC+TGG | 0.396571 | 4_1:-63909782 | None:intergenic |
| GGTTCCGTCTCCACTCTGTC+AGG | 0.404000 | 4_1:+63909102 | Msa0563540:CDS |
| TTCCGCCGTGGGTGGGTGGG+TGG | 0.404316 | 4_1:-63907186 | None:intergenic |
| GACTTGTGGGGTCCAGATGA+TGG | 0.410304 | 4_1:-63908760 | None:intergenic |
| CATGAGTTTGCCACTCGGTT+GGG | 0.410419 | 4_1:+63909980 | Msa0563540:CDS |
| GTGTCATTGGCCTTAATTAG+TGG | 0.410495 | 4_1:-63909788 | None:intergenic |
| CGTTGTACAAACTATGGTTA+AGG | 0.431216 | 4_1:+63910372 | Msa0563540:three_prime_UTR |
| TGGGGTCCAGATGATGGCTT+TGG | 0.432297 | 4_1:-63908754 | None:intergenic |
| TCTAATATATTTCAGGCAAG+AGG | 0.436290 | 4_1:+63908562 | Msa0563540:intron |
| GTCAAGCTTGATGGTGTCAT+TGG | 0.437148 | 4_1:-63909801 | None:intergenic |
| TGAGTTCCGCCGTGGGTGGG+TGG | 0.438905 | 4_1:-63907190 | None:intergenic |
| CATTGGATGCTTGACAAACT+TGG | 0.449684 | 4_1:+63908622 | Msa0563540:CDS |
| AAGGCACTCCCTTGACTTGT+GGG | 0.458121 | 4_1:-63908773 | None:intergenic |
| AAAGTTCGATCTGTTCAATT+CGG | 0.459883 | 4_1:+63909707 | Msa0563540:CDS |
| TCCGCCGTGGGTGGGTGGGT+GGG | 0.463063 | 4_1:-63907185 | None:intergenic |
| GAGTTCCGCCGTGGGTGGGT+GGG | 0.468937 | 4_1:-63907189 | None:intergenic |
| GAGATGAGTTCCGCCGTGGG+TGG | 0.469595 | 4_1:-63907194 | None:intergenic |
| CAGGCACCAAAGCCATCATC+TGG | 0.471057 | 4_1:+63908748 | Msa0563540:intron |
| TCATGAGTTTGCCACTCGGT+TGG | 0.474930 | 4_1:+63909979 | Msa0563540:CDS |
| CATATTTCAGTCTGTTTCGC+AGG | 0.481155 | 4_1:-63908810 | None:intergenic |
| TCAGTCTGTTTCGCAGGATG+AGG | 0.485002 | 4_1:-63908804 | None:intergenic |
| CAAGAACAGAGAGAAACATA+AGG | 0.485349 | 4_1:+63909919 | Msa0563540:CDS |
| ACCATCATAGGTGTTCAGAT+AGG | 0.491470 | 4_1:-63909744 | None:intergenic |
| ATCTGTTCAATTCGGACAGA+AGG | 0.492212 | 4_1:+63909715 | Msa0563540:CDS |
| TTCTTGTTGATGGCAAGGTT+AGG | 0.493369 | 4_1:+63908878 | Msa0563540:CDS |
| CCGTTGCGTGATGTTTAACA+TGG | 0.493445 | 4_1:+63910341 | Msa0563540:three_prime_UTR |
| CCCTATCTGAACACCTATGA+TGG | 0.494508 | 4_1:+63909743 | Msa0563540:CDS |
| ACATATCCCGCTGGTTTCAT+GGG | 0.495686 | 4_1:+63908910 | Msa0563540:CDS |
| GTATCTCTTCCCAAGGGAAA+AGG | 0.504057 | 4_1:+63910040 | Msa0563540:CDS |
| TTGGCAAGGGAACAAAGCCT+TGG | 0.509969 | 4_1:+63910017 | Msa0563540:CDS |
| GAAGGCACTCCCTTGACTTG+TGG | 0.511811 | 4_1:-63908774 | None:intergenic |
| CAAGTTGACTGTTATTGAAG+AGG | 0.512862 | 4_1:+63910066 | Msa0563540:CDS |
| GACTCAATGCTCCAAAACAT+TGG | 0.516338 | 4_1:+63908605 | Msa0563540:CDS |
| AGATGAGTTCCGCCGTGGGT+GGG | 0.518047 | 4_1:-63907193 | None:intergenic |
| TGTCACCATAATATTTGTAA+AGG | 0.520224 | 4_1:-63910280 | None:intergenic |
| CCATCATAGGTGTTCAGATA+GGG | 0.524783 | 4_1:-63909743 | None:intergenic |
| CAATGTGTTTACTATTGGCA+AGG | 0.529290 | 4_1:+63910003 | Msa0563540:CDS |
| TCATGTTCTTGTTGATGGCA+AGG | 0.537954 | 4_1:+63908873 | Msa0563540:CDS |
| TGAAGAGGCTAGAAAGAGGC+AGG | 0.540159 | 4_1:+63910081 | Msa0563540:CDS |
| CATCTGGACCCCACAAGTCA+AGG | 0.541796 | 4_1:+63908764 | Msa0563540:CDS |
| CTAATATATTTCAGGCAAGA+GGG | 0.544568 | 4_1:+63908563 | Msa0563540:intron |
| TGGCAAGGGAACAAAGCCTT+GGG | 0.546208 | 4_1:+63910018 | Msa0563540:CDS |
| ACGACCTCTATTCCTTCCTC+CGG | 0.553480 | 4_1:-63909885 | None:intergenic |
| AAGAACAGAGAGAAACATAA+GGG | 0.554158 | 4_1:+63909920 | Msa0563540:CDS |
| GCCTTGGGTATCTCTTCCCA+AGG | 0.555309 | 4_1:+63910033 | Msa0563540:CDS |
| TGATGTGGGGAATGTTGTCA+TGG | 0.557070 | 4_1:+63909859 | Msa0563540:CDS |
| TGAACCCACCCACCCACCCA+CGG | 0.561542 | 4_1:+63907181 | Msa0563540:five_prime_UTR |
| GTTCCGTCTCCACTCTGTCA+GGG | 0.573710 | 4_1:+63909103 | Msa0563540:CDS |
| AACATGACGCTGCATCAAGA+TGG | 0.573994 | 4_1:-63908857 | None:intergenic |
| GACCACTTGCATCCTGAACA+TGG | 0.574639 | 4_1:-63909958 | None:intergenic |
| CATCCCTGACAGAGTGGAGA+CGG | 0.578629 | 4_1:-63909106 | None:intergenic |
| CACATACCCATGAAACCAGC+GGG | 0.579767 | 4_1:-63908916 | None:intergenic |
| GTGGAGACGGAACCGACCCT+TGG | 0.581652 | 4_1:-63909093 | None:intergenic |
| CCACTCTGTCAGGGATGATG+AGG | 0.582420 | 4_1:+63909112 | Msa0563540:CDS |
| TTGTCATGGTTACCGGAGGA+AGG | 0.582711 | 4_1:+63909873 | Msa0563540:CDS |
| TGGATGCTTGACAAACTTGG+TGG | 0.583185 | 4_1:+63908625 | Msa0563540:CDS |
| TGTCAGGGATGATGAGGCAA+AGG | 0.594932 | 4_1:+63909118 | Msa0563540:CDS |
| ATCAGAGATGAGTTCCGCCG+TGG | 0.595126 | 4_1:-63907198 | None:intergenic |
| ATCTGGACCCCACAAGTCAA+GGG | 0.597269 | 4_1:+63908765 | Msa0563540:CDS |
| TCTGTTCAATTCGGACAGAA+GGG | 0.598687 | 4_1:+63909716 | Msa0563540:CDS |
| AGGCACTCCCTTGACTTGTG+GGG | 0.598802 | 4_1:-63908772 | None:intergenic |
| GTTACCGGAGGAAGGAATAG+AGG | 0.602203 | 4_1:+63909881 | Msa0563540:CDS |
| TTTCGCAGGATGAGGATCAA+AGG | 0.605453 | 4_1:-63908796 | None:intergenic |
| CGTCTTCTGTATGACACCAA+GGG | 0.605611 | 4_1:+63909077 | Msa0563540:CDS |
| TTATTGAAGAGGCTAGAAAG+AGG | 0.605630 | 4_1:+63910077 | Msa0563540:CDS |
| CCGTCTTCTGTATGACACCA+AGG | 0.606098 | 4_1:+63909076 | Msa0563540:CDS |
| CCTTGGTGTCATACAGAAGA+CGG | 0.610727 | 4_1:-63909076 | None:intergenic |
| AATGTGTTTACTATTGGCAA+GGG | 0.614045 | 4_1:+63910004 | Msa0563540:CDS |
| CCTCATCATCCCTGACAGAG+TGG | 0.614659 | 4_1:-63909112 | None:intergenic |
| GGAAGGAATAGAGGTCGTGT+TGG | 0.618743 | 4_1:+63909890 | Msa0563540:CDS |
| GTGGTCATGAGTTTGCCACT+CGG | 0.619011 | 4_1:+63909975 | Msa0563540:CDS |
| GAAAAGGTAACGAACCATGT+TGG | 0.619403 | 4_1:-63907239 | None:intergenic |
| CTTAACCATAGTTTGTACAA+CGG | 0.622570 | 4_1:-63910371 | None:intergenic |
| TTCTGTATGACACCAAGGGT+CGG | 0.629625 | 4_1:+63909081 | Msa0563540:CDS |
| TAGTGGATCTGGATAGCGGA+TGG | 0.630246 | 4_1:-63909771 | None:intergenic |
| TCAGAGATGAGTTCCGCCGT+GGG | 0.640304 | 4_1:-63907197 | None:intergenic |
| AATTGAAAGCATGTTATTAG+GGG | 0.644736 | 4_1:+63910395 | Msa0563540:three_prime_UTR |
| GCAGGATGAGGATCAAAGGA+AGG | 0.644782 | 4_1:-63908792 | None:intergenic |
| TAATTAGTGGATCTGGATAG+CGG | 0.647434 | 4_1:-63909775 | None:intergenic |
| ATCCATGTTCAGGATGCAAG+TGG | 0.648183 | 4_1:+63909956 | Msa0563540:CDS |
| CCATGTTAAACATCACGCAA+CGG | 0.648515 | 4_1:-63910341 | None:intergenic |
| CCCTTGGGAAGAGATACCCA+AGG | 0.659442 | 4_1:-63910034 | None:intergenic |
| CCTTGGGTATCTCTTCCCAA+GGG | 0.683663 | 4_1:+63910034 | Msa0563540:CDS |
| ACAGACAAGACATATCCCGC+TGG | 0.683859 | 4_1:+63908901 | Msa0563540:CDS |
| AATGTTGTCATGGTTACCGG+AGG | 0.684540 | 4_1:+63909869 | Msa0563540:CDS |
| GCACATACCCATGAAACCAG+CGG | 0.695365 | 4_1:-63908917 | None:intergenic |
| ACCCACCCACCCACCCACGG+CGG | 0.705234 | 4_1:+63907184 | Msa0563540:five_prime_UTR |
| AAACACATTGCCCAACCGAG+TGG | 0.706925 | 4_1:-63909990 | None:intergenic |
| TTCAGCACAAGACTCCAACA+TGG | 0.710792 | 4_1:+63907225 | Msa0563540:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAATA+TGG | + | chr4_1:63907855-63907874 | Msa0563540:intron | 0.0% |
| !! | AAAAAAAAAAAAAAAAAAAA+GGG | - | chr4_1:63910202-63910221 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr4_1:63910202-63910221 | None:intergenic | 0.0% |
| !!! | ATGTTTTTCAATAAAAAAAA+AGG | + | chr4_1:63907366-63907385 | Msa0563540:intron | 10.0% |
| !! | AAAATTTAGAAGAAAATAAT+AGG | - | chr4_1:63910316-63910335 | None:intergenic | 10.0% |
| !! | AAAATGTATCATAAAATCTA+GGG | - | chr4_1:63908437-63908456 | None:intergenic | 15.0% |
| !! | TAAAATGTATCATAAAATCT+AGG | - | chr4_1:63908438-63908457 | None:intergenic | 15.0% |
| !! | TAGTTATAAATTAGAATATG+AGG | - | chr4_1:63908541-63908560 | None:intergenic | 15.0% |
| !! | TTAGAAAAAAATTAATCAGT+GGG | - | chr4_1:63909005-63909024 | None:intergenic | 15.0% |
| !! | ATTAGAAAAAAATTAATCAG+TGG | - | chr4_1:63909006-63909025 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAATACAAG+GGG | - | chr4_1:63909195-63909214 | None:intergenic | 15.0% |
| !! | GCAAAAAAAAAAAAATACAA+GGG | - | chr4_1:63909196-63909215 | None:intergenic | 15.0% |
| !! | TGCAAAAAAAAAAAAATACA+AGG | - | chr4_1:63909197-63909216 | None:intergenic | 15.0% |
| !!! | TTTCTTATATTCTTTCATTT+TGG | + | chr4_1:63909669-63909688 | Msa0563540:intron | 15.0% |
| !! | CAATAAAAAAAAAGGTTTGA+TGG | + | chr4_1:63907374-63907393 | Msa0563540:intron | 20.0% |
| !! | TCATGTTATGTTATAACATA+TGG | + | chr4_1:63907416-63907435 | Msa0563540:intron | 20.0% |
| !!! | TCAAACAAGGTTTATTATTT+TGG | + | chr4_1:63907909-63907928 | Msa0563540:intron | 20.0% |
| !!! | CAAACAAGGTTTATTATTTT+GGG | + | chr4_1:63907910-63907929 | Msa0563540:intron | 20.0% |
| !! | CAAAAATCAAGAAATCTTTA+TGG | - | chr4_1:63907978-63907997 | None:intergenic | 20.0% |
| !! | TCTTTCATTGAAAACATTTA+TGG | - | chr4_1:63908176-63908195 | None:intergenic | 20.0% |
| !!! | TTTTGTAACAATGTTTTCAT+TGG | + | chr4_1:63908473-63908492 | Msa0563540:intron | 20.0% |
| !! | TAACTACTCTAATATATTTC+AGG | + | chr4_1:63908555-63908574 | Msa0563540:intron | 20.0% |
| !! | CTTAAAAAGATCTTAACTTA+CGG | - | chr4_1:63909334-63909353 | None:intergenic | 20.0% |
| !! | ATTGAAATATAGTTATGGTA+AGG | - | chr4_1:63909633-63909652 | None:intergenic | 20.0% |
| !! | GAACAATTGAAATATAGTTA+TGG | - | chr4_1:63909638-63909657 | None:intergenic | 20.0% |
| !! | AATTGCCTTTACAAATATTA+TGG | + | chr4_1:63910275-63910294 | Msa0563540:three_prime_UTR | 20.0% |
| !!! | TCTAATTATTCTGGAACAAA+GGG | - | chr4_1:63907711-63907730 | None:intergenic | 25.0% |
| ! | CACTATTCACATAATATACT+TGG | - | chr4_1:63907882-63907901 | None:intergenic | 25.0% |
| !!! | TGATTTTTGAAATGCAATCT+TGG | + | chr4_1:63907989-63908008 | Msa0563540:intron | 25.0% |
| !! | TTTTTATGTTTCAGTGAGTT+TGG | + | chr4_1:63908013-63908032 | Msa0563540:intron | 25.0% |
| !! | TTTTATGTTTCAGTGAGTTT+GGG | + | chr4_1:63908014-63908033 | Msa0563540:intron | 25.0% |
| !!! | CAACACAATTTTAGAAAACA+TGG | - | chr4_1:63908109-63908128 | None:intergenic | 25.0% |
| ! | ATAGTTATATGTTCTTGACA+TGG | + | chr4_1:63908142-63908161 | Msa0563540:intron | 25.0% |
| ! | TAGTTATATGTTCTTGACAT+GGG | + | chr4_1:63908143-63908162 | Msa0563540:intron | 25.0% |
| !! | TTCTTATTTGACCTCATATA+TGG | + | chr4_1:63908348-63908367 | Msa0563540:intron | 25.0% |
| ! | AATATAATTCAGATGAAGTG+TGG | - | chr4_1:63908671-63908690 | None:intergenic | 25.0% |
| ! | ATTGAGCATATGAATTCAAA+TGG | - | chr4_1:63908715-63908734 | None:intergenic | 25.0% |
| ! | TTTGAATTCATATGCTCAAT+TGG | + | chr4_1:63908715-63908734 | Msa0563540:intron | 25.0% |
| ! | TTAGAAATTTAACAACACTG+GGG | - | chr4_1:63908960-63908979 | None:intergenic | 25.0% |
| ! | CTTAGAAATTTAACAACACT+GGG | - | chr4_1:63908961-63908980 | None:intergenic | 25.0% |
| ! | ACTTAGAAATTTAACAACAC+TGG | - | chr4_1:63908962-63908981 | None:intergenic | 25.0% |
| !! | GTGTTGTTAAATTTCTAAGT+AGG | + | chr4_1:63908962-63908981 | Msa0563540:intron | 25.0% |
| !! | TAAATTTCTAAGTAGGCTTT+TGG | + | chr4_1:63908969-63908988 | Msa0563540:intron | 25.0% |
| !! | CGTAAGTTAAGATCTTTTTA+AGG | + | chr4_1:63909332-63909351 | Msa0563540:intron | 25.0% |
| !! | TGATTTTATCAAGTTTGATG+TGG | + | chr4_1:63909844-63909863 | Msa0563540:CDS | 25.0% |
| !! | GATTTTATCAAGTTTGATGT+GGG | + | chr4_1:63909845-63909864 | Msa0563540:CDS | 25.0% |
| !! | ATTTTATCAAGTTTGATGTG+GGG | + | chr4_1:63909846-63909865 | Msa0563540:CDS | 25.0% |
| !!! | AAATTGCATTTTTGTTGACT+GGG | + | chr4_1:63910141-63910160 | Msa0563540:three_prime_UTR | 25.0% |
| ! | TGTCACCATAATATTTGTAA+AGG | - | chr4_1:63910283-63910302 | None:intergenic | 25.0% |
| AATGAACTGAGAAATTGAAG+AGG | - | chr4_1:63907264-63907283 | None:intergenic | 30.0% | |
| ACTCACACATGAAATTACAT+TGG | + | chr4_1:63907602-63907621 | Msa0563540:intron | 30.0% | |
| CACATGAAATTACATTGGAT+TGG | + | chr4_1:63907607-63907626 | Msa0563540:intron | 30.0% | |
| !! | GTCTAATTATTCTGGAACAA+AGG | - | chr4_1:63907712-63907731 | None:intergenic | 30.0% |
| GTGAAACAGTCTAATTATTC+TGG | - | chr4_1:63907720-63907739 | None:intergenic | 30.0% | |
| TAAATGTCAAAATTGCGCAT+GGG | - | chr4_1:63907748-63907767 | None:intergenic | 30.0% | |
| TTAAATGTCAAAATTGCGCA+TGG | - | chr4_1:63907749-63907768 | None:intergenic | 30.0% | |
| !!! | CAAGGTTTATTATTTTGGGA+TGG | + | chr4_1:63907914-63907933 | Msa0563540:intron | 30.0% |
| ! | CTAAAATCTCAAAGTATCCT+AGG | - | chr4_1:63908060-63908079 | None:intergenic | 30.0% |
| !!! | TGAGATTTTAGAACTTCAGA+AGG | + | chr4_1:63908069-63908088 | Msa0563540:intron | 30.0% |
| !!! | ATTTTAGAACTTCAGAAGGA+TGG | + | chr4_1:63908073-63908092 | Msa0563540:intron | 30.0% |
| AAGAATACAAGCCATATATG+AGG | - | chr4_1:63908362-63908381 | None:intergenic | 30.0% | |
| !! | ATTGGCTTTCTGTAATTGTT+AGG | + | chr4_1:63908491-63908510 | Msa0563540:intron | 30.0% |
| TCTAATATATTTCAGGCAAG+AGG | + | chr4_1:63908562-63908581 | Msa0563540:intron | 30.0% | |
| CTAATATATTTCAGGCAAGA+GGG | + | chr4_1:63908563-63908582 | Msa0563540:intron | 30.0% | |
| TGGAACATACAAATAAACAC+AGG | - | chr4_1:63908695-63908714 | None:intergenic | 30.0% | |
| ATTCATATGCTCAATTGGTT+TGG | + | chr4_1:63908720-63908739 | Msa0563540:intron | 30.0% | |
| TAGAAATTTAACAACACTGG+GGG | - | chr4_1:63908959-63908978 | None:intergenic | 30.0% | |
| TTAGGAATAGAAACAACATC+TGG | - | chr4_1:63909041-63909060 | None:intergenic | 30.0% | |
| !! | CGGAAGTTTTCATTTGTTTT+AGG | - | chr4_1:63909059-63909078 | None:intergenic | 30.0% |
| TGAAATTAGAGAGATAGTGA+AGG | - | chr4_1:63909154-63909173 | None:intergenic | 30.0% | |
| ACGATATGCATTGTTAAACA+GGG | - | chr4_1:63909252-63909271 | None:intergenic | 30.0% | |
| TGTCAGTATTTGTACTTCAT+AGG | + | chr4_1:63909504-63909523 | Msa0563540:intron | 30.0% | |
| GTCAGTATTTGTACTTCATA+GGG | + | chr4_1:63909505-63909524 | Msa0563540:intron | 30.0% | |
| AAAGTTCGATCTGTTCAATT+CGG | + | chr4_1:63909707-63909726 | Msa0563540:CDS | 30.0% | |
| AAGAACAGAGAGAAACATAA+GGG | + | chr4_1:63909920-63909939 | Msa0563540:CDS | 30.0% | |
| AATGTGTTTACTATTGGCAA+GGG | + | chr4_1:63910004-63910023 | Msa0563540:CDS | 30.0% | |
| ! | CAAATTGCATTTTTGTTGAC+TGG | + | chr4_1:63910140-63910159 | Msa0563540:three_prime_UTR | 30.0% |
| ! | CTTAACCATAGTTTGTACAA+CGG | - | chr4_1:63910374-63910393 | None:intergenic | 30.0% |
| ! | GGAATTGAAAGCATGTTATT+AGG | + | chr4_1:63910393-63910412 | Msa0563540:three_prime_UTR | 30.0% |
| CTGAGAAATTGAAGAGGAAA+AGG | - | chr4_1:63907258-63907277 | None:intergenic | 35.0% | |
| ATGGAACTGAATAGTGTTGT+TGG | + | chr4_1:63907435-63907454 | Msa0563540:intron | 35.0% | |
| ! | AACTGAATAGTGTTGTTGGA+AGG | + | chr4_1:63907439-63907458 | Msa0563540:intron | 35.0% |
| ACATCTTCAATCATAAGGGT+AGG | - | chr4_1:63907522-63907541 | None:intergenic | 35.0% | |
| GGACACATCTTCAATCATAA+GGG | - | chr4_1:63907526-63907545 | None:intergenic | 35.0% | |
| CTTATGATTGAAGATGTGTC+CGG | + | chr4_1:63907525-63907544 | Msa0563540:intron | 35.0% | |
| ACAAAGGGAGTAGTAGTATA+AGG | - | chr4_1:63907696-63907715 | None:intergenic | 35.0% | |
| GTCGAGATGAATATTTCGAA+TGG | - | chr4_1:63907791-63907810 | None:intergenic | 35.0% | |
| ATAGTGCACATTGTCAAACA+AGG | + | chr4_1:63907896-63907915 | Msa0563540:intron | 35.0% | |
| ! | TGGCTTGTATTCTTTAGCTT+TGG | + | chr4_1:63908368-63908387 | Msa0563540:intron | 35.0% |
| ! | TTGTCAAGCATCCAATGTTT+TGG | - | chr4_1:63908619-63908638 | None:intergenic | 35.0% |
| TGTGGAAAATGGTCATACAA+AGG | - | chr4_1:63908653-63908672 | None:intergenic | 35.0% | |
| TTCAGATGAAGTGTGGAAAA+TGG | - | chr4_1:63908664-63908683 | None:intergenic | 35.0% | |
| GACGATATGCATTGTTAAAC+AGG | - | chr4_1:63909253-63909272 | None:intergenic | 35.0% | |
| ACAAGTCATTCGTCTATAGT+CGG | - | chr4_1:63909309-63909328 | None:intergenic | 35.0% | |
| ! | AAGTCTTGGATCTAAAGTGT+CGG | - | chr4_1:63909373-63909392 | None:intergenic | 35.0% |
| ! | TAATTAGTGGATCTGGATAG+CGG | - | chr4_1:63909778-63909797 | None:intergenic | 35.0% |
| CTATCCAGATCCACTAATTA+AGG | + | chr4_1:63909778-63909797 | Msa0563540:CDS | 35.0% | |
| !!! | CAGTGATCTTGTTGTTTTCA+AGG | - | chr4_1:63909826-63909845 | None:intergenic | 35.0% |
| CAAGAACAGAGAGAAACATA+AGG | + | chr4_1:63909919-63909938 | Msa0563540:CDS | 35.0% | |
| !!! | TTTTGAGACTATCCATGTTC+AGG | + | chr4_1:63909946-63909965 | Msa0563540:CDS | 35.0% |
| TTGGGCAATGTGTTTACTAT+TGG | + | chr4_1:63909998-63910017 | Msa0563540:CDS | 35.0% | |
| CAATGTGTTTACTATTGGCA+AGG | + | chr4_1:63910003-63910022 | Msa0563540:CDS | 35.0% | |
| ! | CAAGTTGACTGTTATTGAAG+AGG | + | chr4_1:63910066-63910085 | Msa0563540:CDS | 35.0% |
| TTATTGAAGAGGCTAGAAAG+AGG | + | chr4_1:63910077-63910096 | Msa0563540:CDS | 35.0% | |
| !!! | TGACTGGGAGGTTTTTTTTT+TGG | + | chr4_1:63910156-63910175 | Msa0563540:three_prime_UTR | 35.0% |
| TTGATCCGTTGTACAAACTA+TGG | + | chr4_1:63910366-63910385 | Msa0563540:three_prime_UTR | 35.0% | |
| CGTTGTACAAACTATGGTTA+AGG | + | chr4_1:63910372-63910391 | Msa0563540:three_prime_UTR | 35.0% | |
| GAAAAGGTAACGAACCATGT+TGG | - | chr4_1:63907242-63907261 | None:intergenic | 40.0% | |
| GTAGCTGCATTGTGCTTATT+AGG | + | chr4_1:63907298-63907317 | Msa0563540:intron | 40.0% | |
| ! | TCCTGCATGTTTTCAACTGT+TGG | + | chr4_1:63907468-63907487 | Msa0563540:intron | 40.0% |
| ACCAACAGTTGAAAACATGC+AGG | - | chr4_1:63907472-63907491 | None:intergenic | 40.0% | |
| CTTCAATCATAAGGGTAGGA+GGG | - | chr4_1:63907518-63907537 | None:intergenic | 40.0% | |
| TCTTCAATCATAAGGGTAGG+AGG | - | chr4_1:63907519-63907538 | None:intergenic | 40.0% | |
| CGGACACATCTTCAATCATA+AGG | - | chr4_1:63907527-63907546 | None:intergenic | 40.0% | |
| CAGACACTAACAATGACACA+TGG | - | chr4_1:63907571-63907590 | None:intergenic | 40.0% | |
| ! | TTTGGGATGGAGAGAGTATA+TGG | + | chr4_1:63907927-63907946 | Msa0563540:intron | 40.0% |
| ! | TTGGGATGGAGAGAGTATAT+GGG | + | chr4_1:63907928-63907947 | Msa0563540:intron | 40.0% |
| AGTATATGGGGTTGACTACA+TGG | + | chr4_1:63907941-63907960 | Msa0563540:intron | 40.0% | |
| TCAGTGAGTTTGGGTATGTT+TGG | + | chr4_1:63908023-63908042 | Msa0563540:intron | 40.0% | |
| GTTTGGAAGTCTCAATACCT+AGG | + | chr4_1:63908040-63908059 | Msa0563540:intron | 40.0% | |
| GAGCTCATCTTTATGTCCTA+GGG | + | chr4_1:63908224-63908243 | Msa0563540:intron | 40.0% | |
| TCATCTTTATGTCCTAGGGA+TGG | + | chr4_1:63908228-63908247 | Msa0563540:intron | 40.0% | |
| CATCTTTATGTCCTAGGGAT+GGG | + | chr4_1:63908229-63908248 | Msa0563540:intron | 40.0% | |
| ATCTTTATGTCCTAGGGATG+GGG | + | chr4_1:63908230-63908249 | Msa0563540:intron | 40.0% | |
| GACTCAATGCTCCAAAACAT+TGG | + | chr4_1:63908605-63908624 | Msa0563540:CDS | 40.0% | |
| CATTGGATGCTTGACAAACT+TGG | + | chr4_1:63908622-63908641 | Msa0563540:CDS | 40.0% | |
| CATATTTCAGTCTGTTTCGC+AGG | - | chr4_1:63908813-63908832 | None:intergenic | 40.0% | |
| !! | TCATGTTCTTGTTGATGGCA+AGG | + | chr4_1:63908873-63908892 | Msa0563540:CDS | 40.0% |
| !! | TTCTTGTTGATGGCAAGGTT+AGG | + | chr4_1:63908878-63908897 | Msa0563540:CDS | 40.0% |
| TCATAGGGTACAAGTCTTCA+AGG | + | chr4_1:63909520-63909539 | Msa0563540:intron | 40.0% | |
| CATAGGGTACAAGTCTTCAA+GGG | + | chr4_1:63909521-63909540 | Msa0563540:intron | 40.0% | |
| AATGTCAGACAGATGCATAC+AGG | + | chr4_1:63909564-63909583 | Msa0563540:intron | 40.0% | |
| ATCTGTTCAATTCGGACAGA+AGG | + | chr4_1:63909715-63909734 | Msa0563540:CDS | 40.0% | |
| TCTGTTCAATTCGGACAGAA+GGG | + | chr4_1:63909716-63909735 | Msa0563540:CDS | 40.0% | |
| CCATCATAGGTGTTCAGATA+GGG | - | chr4_1:63909746-63909765 | None:intergenic | 40.0% | |
| ACCATCATAGGTGTTCAGAT+AGG | - | chr4_1:63909747-63909766 | None:intergenic | 40.0% | |
| !! | TTGGCCTTAATTAGTGGATC+TGG | - | chr4_1:63909785-63909804 | None:intergenic | 40.0% |
| !! | GTGTCATTGGCCTTAATTAG+TGG | - | chr4_1:63909791-63909810 | None:intergenic | 40.0% |
| !! | GTTTTCAAGGTCAAGCTTGA+TGG | - | chr4_1:63909813-63909832 | None:intergenic | 40.0% |
| ! | AACTTGATGCCTTTTCCCTT+GGG | - | chr4_1:63910052-63910071 | None:intergenic | 40.0% |
| !! | TTGCATTTTTGTTGACTGGG+AGG | + | chr4_1:63910144-63910163 | Msa0563540:three_prime_UTR | 40.0% |
| CCATGTTAAACATCACGCAA+CGG | - | chr4_1:63910344-63910363 | None:intergenic | 40.0% | |
| TTCAGCACAAGACTCCAACA+TGG | + | chr4_1:63907225-63907244 | Msa0563540:exon | 45.0% | |
| CGCTAACATGTGTTAGACAC+CGG | - | chr4_1:63907547-63907566 | None:intergenic | 45.0% | |
| ! | TGGGATGGAGAGAGTATATG+GGG | + | chr4_1:63907929-63907948 | Msa0563540:intron | 45.0% |
| CGAGCTCATCTTTATGTCCT+AGG | + | chr4_1:63908223-63908242 | Msa0563540:intron | 45.0% | |
| ACTAACATATCCCCATCCCT+AGG | - | chr4_1:63908243-63908262 | None:intergenic | 45.0% | |
| TGGATGCTTGACAAACTTGG+TGG | + | chr4_1:63908625-63908644 | Msa0563540:CDS | 45.0% | |
| !! | CTCAATTGGTTTGGATGTGC+AGG | + | chr4_1:63908729-63908748 | Msa0563540:intron | 45.0% |
| TTTCGCAGGATGAGGATCAA+AGG | - | chr4_1:63908799-63908818 | None:intergenic | 45.0% | |
| AACATGACGCTGCATCAAGA+TGG | - | chr4_1:63908860-63908879 | None:intergenic | 45.0% | |
| CAGCGTCATGTTCTTGTTGA+TGG | + | chr4_1:63908868-63908887 | Msa0563540:CDS | 45.0% | |
| !! | ACATATCCCGCTGGTTTCAT+GGG | + | chr4_1:63908910-63908929 | Msa0563540:CDS | 45.0% |
| !! | CCTTGGTGTCATACAGAAGA+CGG | - | chr4_1:63909079-63909098 | None:intergenic | 45.0% |
| CGTCTTCTGTATGACACCAA+GGG | + | chr4_1:63909077-63909096 | Msa0563540:CDS | 45.0% | |
| TTCTGTATGACACCAAGGGT+CGG | + | chr4_1:63909081-63909100 | Msa0563540:CDS | 45.0% | |
| ACTCACTCACACACTGCTTA+AGG | + | chr4_1:63909273-63909292 | Msa0563540:intron | 45.0% | |
| CTCACTCACACACTGCTTAA+GGG | + | chr4_1:63909274-63909293 | Msa0563540:intron | 45.0% | |
| ATACTGACACAGACACGACA+TGG | - | chr4_1:63909493-63909512 | None:intergenic | 45.0% | |
| CCCTATCTGAACACCTATGA+TGG | + | chr4_1:63909743-63909762 | Msa0563540:CDS | 45.0% | |
| !! | GTCAAGCTTGATGGTGTCAT+TGG | - | chr4_1:63909804-63909823 | None:intergenic | 45.0% |
| TGATGTGGGGAATGTTGTCA+TGG | + | chr4_1:63909859-63909878 | Msa0563540:CDS | 45.0% | |
| GGGAATGTTGTCATGGTTAC+CGG | + | chr4_1:63909866-63909885 | Msa0563540:CDS | 45.0% | |
| AATGTTGTCATGGTTACCGG+AGG | + | chr4_1:63909869-63909888 | Msa0563540:CDS | 45.0% | |
| ATCCATGTTCAGGATGCAAG+TGG | + | chr4_1:63909956-63909975 | Msa0563540:CDS | 45.0% | |
| GTATCTCTTCCCAAGGGAAA+AGG | + | chr4_1:63910040-63910059 | Msa0563540:CDS | 45.0% | |
| ! | CAACTTGATGCCTTTTCCCT+TGG | - | chr4_1:63910053-63910072 | None:intergenic | 45.0% |
| CCGTTGCGTGATGTTTAACA+TGG | + | chr4_1:63910341-63910360 | Msa0563540:three_prime_UTR | 45.0% | |
| ! | GCCGTCTTTTTGTGTCGTGT+CGG | + | chr4_1:63907635-63907654 | Msa0563540:intron | 50.0% |
| CCCGACACGACACAAAAAGA+CGG | - | chr4_1:63907639-63907658 | None:intergenic | 50.0% | |
| ! | CCGTCTTTTTGTGTCGTGTC+GGG | + | chr4_1:63907636-63907655 | Msa0563540:intron | 50.0% |
| ATCTGGACCCCACAAGTCAA+GGG | + | chr4_1:63908765-63908784 | Msa0563540:CDS | 50.0% | |
| !! | AAGGCACTCCCTTGACTTGT+GGG | - | chr4_1:63908776-63908795 | None:intergenic | 50.0% |
| GCAGGATGAGGATCAAAGGA+AGG | - | chr4_1:63908795-63908814 | None:intergenic | 50.0% | |
| TCAGTCTGTTTCGCAGGATG+AGG | - | chr4_1:63908807-63908826 | None:intergenic | 50.0% | |
| ACAGACAAGACATATCCCGC+TGG | + | chr4_1:63908901-63908920 | Msa0563540:CDS | 50.0% | |
| !! | GACATATCCCGCTGGTTTCA+TGG | + | chr4_1:63908909-63908928 | Msa0563540:CDS | 50.0% |
| CACATACCCATGAAACCAGC+GGG | - | chr4_1:63908919-63908938 | None:intergenic | 50.0% | |
| GCACATACCCATGAAACCAG+CGG | - | chr4_1:63908920-63908939 | None:intergenic | 50.0% | |
| CCGTCTTCTGTATGACACCA+AGG | + | chr4_1:63909076-63909095 | Msa0563540:CDS | 50.0% | |
| TGTCAGGGATGATGAGGCAA+AGG | + | chr4_1:63909118-63909137 | Msa0563540:CDS | 50.0% | |
| TCACGTGTCTGGACAAGTCT+TGG | - | chr4_1:63909387-63909406 | None:intergenic | 50.0% | |
| !! | TAGTGGATCTGGATAGCGGA+TGG | - | chr4_1:63909774-63909793 | None:intergenic | 50.0% |
| TTGTCATGGTTACCGGAGGA+AGG | + | chr4_1:63909873-63909892 | Msa0563540:CDS | 50.0% | |
| GTTACCGGAGGAAGGAATAG+AGG | + | chr4_1:63909881-63909900 | Msa0563540:CDS | 50.0% | |
| ACGACCTCTATTCCTTCCTC+CGG | - | chr4_1:63909888-63909907 | None:intergenic | 50.0% | |
| GGAAGGAATAGAGGTCGTGT+TGG | + | chr4_1:63909890-63909909 | Msa0563540:CDS | 50.0% | |
| GACCACTTGCATCCTGAACA+TGG | - | chr4_1:63909961-63909980 | None:intergenic | 50.0% | |
| GTGGTCATGAGTTTGCCACT+CGG | + | chr4_1:63909975-63909994 | Msa0563540:CDS | 50.0% | |
| TCATGAGTTTGCCACTCGGT+TGG | + | chr4_1:63909979-63909998 | Msa0563540:CDS | 50.0% | |
| CATGAGTTTGCCACTCGGTT+GGG | + | chr4_1:63909980-63909999 | Msa0563540:CDS | 50.0% | |
| AAACACATTGCCCAACCGAG+TGG | - | chr4_1:63909993-63910012 | None:intergenic | 50.0% | |
| TTGGCAAGGGAACAAAGCCT+TGG | + | chr4_1:63910017-63910036 | Msa0563540:CDS | 50.0% | |
| TGGCAAGGGAACAAAGCCTT+GGG | + | chr4_1:63910018-63910037 | Msa0563540:CDS | 50.0% | |
| CCTTGGGTATCTCTTCCCAA+GGG | + | chr4_1:63910034-63910053 | Msa0563540:CDS | 50.0% | |
| TGAAGAGGCTAGAAAGAGGC+AGG | + | chr4_1:63910081-63910100 | Msa0563540:CDS | 50.0% | |
| TCAGAGATGAGTTCCGCCGT+GGG | - | chr4_1:63907200-63907219 | None:intergenic | 55.0% | |
| ATCAGAGATGAGTTCCGCCG+TGG | - | chr4_1:63907201-63907220 | None:intergenic | 55.0% | |
| CAGGCACCAAAGCCATCATC+TGG | + | chr4_1:63908748-63908767 | Msa0563540:intron | 55.0% | |
| ! | TGGGGTCCAGATGATGGCTT+TGG | - | chr4_1:63908757-63908776 | None:intergenic | 55.0% |
| GACTTGTGGGGTCCAGATGA+TGG | - | chr4_1:63908763-63908782 | None:intergenic | 55.0% | |
| CATCTGGACCCCACAAGTCA+AGG | + | chr4_1:63908764-63908783 | Msa0563540:CDS | 55.0% | |
| !! | AGGCACTCCCTTGACTTGTG+GGG | - | chr4_1:63908775-63908794 | None:intergenic | 55.0% |
| !! | GAAGGCACTCCCTTGACTTG+TGG | - | chr4_1:63908777-63908796 | None:intergenic | 55.0% |
| GTTCCGTCTCCACTCTGTCA+GGG | + | chr4_1:63909103-63909122 | Msa0563540:CDS | 55.0% | |
| CATCCCTGACAGAGTGGAGA+CGG | - | chr4_1:63909109-63909128 | None:intergenic | 55.0% | |
| CCTCATCATCCCTGACAGAG+TGG | - | chr4_1:63909115-63909134 | None:intergenic | 55.0% | |
| CCACTCTGTCAGGGATGATG+AGG | + | chr4_1:63909112-63909131 | Msa0563540:CDS | 55.0% | |
| ACAGACGCATGTCACGTGTC+TGG | - | chr4_1:63909398-63909417 | None:intergenic | 55.0% | |
| GCCTTGGGTATCTCTTCCCA+AGG | + | chr4_1:63910033-63910052 | Msa0563540:CDS | 55.0% | |
| CCCTTGGGAAGAGATACCCA+AGG | - | chr4_1:63910037-63910056 | None:intergenic | 55.0% | |
| AGATGAGTTCCGCCGTGGGT+GGG | - | chr4_1:63907196-63907215 | None:intergenic | 60.0% | |
| GGTTCCGTCTCCACTCTGTC+AGG | + | chr4_1:63909102-63909121 | Msa0563540:CDS | 60.0% | |
| GCGGATGGTGCGACCATCAT+AGG | - | chr4_1:63909759-63909778 | None:intergenic | 60.0% | |
| TGAACCCACCCACCCACCCA+CGG | + | chr4_1:63907181-63907200 | Msa0563540:five_prime_UTR | 65.0% | |
| GAGATGAGTTCCGCCGTGGG+TGG | - | chr4_1:63907197-63907216 | None:intergenic | 65.0% | |
| GTGGAGACGGAACCGACCCT+TGG | - | chr4_1:63909096-63909115 | None:intergenic | 65.0% | |
| GAGTTCCGCCGTGGGTGGGT+GGG | - | chr4_1:63907192-63907211 | None:intergenic | 70.0% | |
| TGAGTTCCGCCGTGGGTGGG+TGG | - | chr4_1:63907193-63907212 | None:intergenic | 70.0% | |
| ACCCACCCACCCACCCACGG+CGG | + | chr4_1:63907184-63907203 | Msa0563540:five_prime_UTR | 75.0% | |
| TCCGCCGTGGGTGGGTGGGT+GGG | - | chr4_1:63907188-63907207 | None:intergenic | 75.0% | |
| TTCCGCCGTGGGTGGGTGGG+TGG | - | chr4_1:63907189-63907208 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 63907175 | 63910416 | 63907175 | ID=Msa0563540;Name=Msa0563540 |
| chr4_1 | mRNA | 63907175 | 63910416 | 63907175 | ID=Msa0563540-mRNA-1;Parent=Msa0563540;Name=Msa0563540-mRNA-1;_AED=0.04;_eAED=0.04;_QI=69|1|1|1|0.75|0.8|5|287|264 |
| chr4_1 | exon | 63907175 | 63907246 | 63907175 | ID=Msa0563540-mRNA-1:exon:20367;Parent=Msa0563540-mRNA-1 |
| chr4_1 | exon | 63908577 | 63908654 | 63908577 | ID=Msa0563540-mRNA-1:exon:20368;Parent=Msa0563540-mRNA-1 |
| chr4_1 | exon | 63908751 | 63908931 | 63908751 | ID=Msa0563540-mRNA-1:exon:20369;Parent=Msa0563540-mRNA-1 |
| chr4_1 | exon | 63909042 | 63909139 | 63909042 | ID=Msa0563540-mRNA-1:exon:20370;Parent=Msa0563540-mRNA-1 |
| chr4_1 | exon | 63909695 | 63910416 | 63909695 | ID=Msa0563540-mRNA-1:exon:20371;Parent=Msa0563540-mRNA-1 |
| chr4_1 | five_prime_UTR | 63907175 | 63907243 | 63907175 | ID=Msa0563540-mRNA-1:five_prime_utr;Parent=Msa0563540-mRNA-1 |
| chr4_1 | CDS | 63907244 | 63907246 | 63907244 | ID=Msa0563540-mRNA-1:cds;Parent=Msa0563540-mRNA-1 |
| chr4_1 | CDS | 63908577 | 63908654 | 63908577 | ID=Msa0563540-mRNA-1:cds;Parent=Msa0563540-mRNA-1 |
| chr4_1 | CDS | 63908751 | 63908931 | 63908751 | ID=Msa0563540-mRNA-1:cds;Parent=Msa0563540-mRNA-1 |
| chr4_1 | CDS | 63909042 | 63909139 | 63909042 | ID=Msa0563540-mRNA-1:cds;Parent=Msa0563540-mRNA-1 |
| chr4_1 | CDS | 63909695 | 63910129 | 63909695 | ID=Msa0563540-mRNA-1:cds;Parent=Msa0563540-mRNA-1 |
| chr4_1 | three_prime_UTR | 63910130 | 63910416 | 63910130 | ID=Msa0563540-mRNA-1:three_prime_utr;Parent=Msa0563540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
