Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0749320 | XP_024639555.1 | 91.933 | 719 | 8 | 1 | 1 | 669 | 1 | 719 | 0.0 | 1329 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0749320 | sp|Q5FQM3|IF2_GLUOX | 41.696 | 578 | 268 | 5 | 134 | 649 | 341 | 911 | 1.13e-138 | 431 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0749320 | A0A072UF32 | 91.933 | 719 | 8 | 1 | 1 | 669 | 1 | 719 | 0.0 | 1329 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017510 | Msa0749320 | 0.815045 | 1.130164e-51 | -8.615850e-47 |
Msa0071380 | Msa0749320 | -0.803472 | 3.430170e-49 | -8.615850e-47 |
Msa0681270 | Msa0749320 | 0.805409 | 1.353786e-49 | -8.615850e-47 |
Msa0689260 | Msa0749320 | 0.800738 | 1.252144e-48 | -8.615850e-47 |
Msa0692040 | Msa0749320 | -0.811757 | 5.969097e-51 | -8.615850e-47 |
Msa0693650 | Msa0749320 | 0.806908 | 6.545367e-50 | -8.615850e-47 |
Msa0715700 | Msa0749320 | 0.804915 | 1.717984e-49 | -8.615850e-47 |
Msa0749290 | Msa0749320 | 0.960409 | 1.591291e-118 | -8.615850e-47 |
Msa0749320 | Msa0759690 | 0.826258 | 2.994201e-54 | -8.615850e-47 |
Msa0749320 | Msa0793800 | 0.801849 | 7.414963e-49 | -8.615850e-47 |
Msa0749320 | Msa0880140 | 0.815468 | 9.102970e-52 | -8.615850e-47 |
Msa0749320 | Msa1075540 | 0.802104 | 6.572719e-49 | -8.615850e-47 |
Msa0749320 | Msa1100050 | 0.801494 | 8.767212e-49 | -8.615850e-47 |
Msa0749320 | Msa1135470 | 0.806717 | 7.181327e-50 | -8.615850e-47 |
Msa0749320 | Msa1162270 | 0.802569 | 5.272794e-49 | -8.615850e-47 |
Msa0749320 | Msa1253020 | 0.828185 | 1.034900e-54 | -8.615850e-47 |
Msa0749320 | Msa1358250 | 0.800511 | 1.392789e-48 | -8.615850e-47 |
Msa0749320 | Msa1370070 | -0.801442 | 8.988780e-49 | -8.615850e-47 |
Msa0749320 | Msa1374470 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
Msa0749320 | Msa1392780 | 0.800350 | 1.502180e-48 | -8.615850e-47 |
Msa0749320 | Msa1459270 | 0.947023 | 1.501297e-105 | -8.615850e-47 |
Msa0157290 | Msa0749320 | 0.815316 | 9.838408e-52 | -8.615850e-47 |
Msa0229230 | Msa0749320 | 0.805964 | 1.034992e-49 | -8.615850e-47 |
Msa0428590 | Msa0749320 | 0.832000 | 1.213173e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0749320 | MtrunA17_Chr5g0412261 | 91.933 | 719 | 8 | 1 | 1 | 669 | 1 | 719 | 0.0 | 1329 |
Msa0749320 | MtrunA17_Chr2g0312621 | 38.953 | 516 | 246 | 8 | 200 | 654 | 495 | 1002 | 1.04e-100 | 330 |
Msa0749320 | MtrunA17_Chr5g0411001 | 88.000 | 100 | 9 | 1 | 365 | 464 | 1 | 97 | 9.80e-54 | 180 |
Msa0749320 | MtrunA17_Chr1g0201991 | 30.970 | 268 | 133 | 7 | 200 | 417 | 235 | 500 | 1.07e-24 | 109 |
Msa0749320 | MtrunA17_Chr1g0202021 | 30.712 | 267 | 135 | 7 | 200 | 417 | 750 | 1015 | 1.28e-23 | 107 |
Msa0749320 | MtrunA17_Chr4g0000221 | 33.333 | 114 | 73 | 1 | 200 | 313 | 39 | 149 | 1.88e-13 | 73.2 |
Msa0749320 | MtrunA17_Chr3g0130991 | 28.333 | 240 | 140 | 7 | 193 | 408 | 70 | 301 | 9.27e-13 | 71.6 |
Msa0749320 | MtrunA17_Chr1g0173551 | 28.800 | 250 | 145 | 10 | 191 | 410 | 70 | 316 | 1.10e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0749320 | AT4G11160.1 | 59.784 | 741 | 215 | 10 | 7 | 669 | 6 | 741 | 0.0 | 812 |
Msa0749320 | AT4G11160.2 | 59.304 | 747 | 218 | 13 | 1 | 669 | 5 | 743 | 0.0 | 811 |
Msa0749320 | AT4G11160.3 | 67.702 | 483 | 138 | 5 | 63 | 527 | 69 | 551 | 0.0 | 634 |
Msa0749320 | AT1G17220.1 | 39.223 | 515 | 246 | 7 | 200 | 654 | 500 | 1007 | 1.83e-95 | 317 |
Msa0749320 | AT1G21160.1 | 31.939 | 263 | 130 | 8 | 200 | 413 | 496 | 758 | 1.55e-23 | 107 |
Msa0749320 | AT1G76810.1 | 30.435 | 276 | 143 | 7 | 190 | 417 | 695 | 969 | 1.31e-22 | 103 |
Msa0749320 | AT1G76720.2 | 30.403 | 273 | 141 | 7 | 193 | 417 | 654 | 925 | 1.33e-21 | 100 |
Msa0749320 | AT1G76720.1 | 30.403 | 273 | 141 | 7 | 193 | 417 | 621 | 892 | 1.39e-21 | 100 |
Msa0749320 | AT2G27700.1 | 27.715 | 267 | 143 | 6 | 200 | 417 | 35 | 300 | 2.38e-17 | 85.9 |
Msa0749320 | AT2G27700.2 | 28.358 | 268 | 141 | 7 | 200 | 417 | 35 | 301 | 3.60e-17 | 85.5 |
Msa0749320 | AT5G39900.1 | 34.270 | 178 | 86 | 5 | 205 | 359 | 70 | 239 | 3.07e-14 | 76.6 |
Msa0749320 | AT5G13650.1 | 31.646 | 237 | 127 | 10 | 204 | 410 | 85 | 316 | 1.19e-13 | 74.7 |
Msa0749320 | AT5G13650.2 | 31.646 | 237 | 127 | 10 | 204 | 410 | 86 | 317 | 1.30e-13 | 74.7 |
Msa0749320 | AT5G08650.2 | 26.378 | 254 | 149 | 6 | 182 | 408 | 62 | 304 | 4.70e-13 | 72.8 |
Msa0749320 | AT5G08650.1 | 26.378 | 254 | 149 | 6 | 182 | 408 | 62 | 304 | 5.46e-13 | 72.8 |
Find 213 sgRNAs with CRISPR-Local
Find 727 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCTCCGACTTAATAAATT+TGG | 0.122459 | 5_2:+2809409 | None:intergenic |
CTCACATACTTCTCCCTCTT+TGG | 0.129249 | 5_2:+2812839 | None:intergenic |
CCGTGTGATTTACCACTTAT+TGG | 0.197956 | 5_2:-2809783 | Msa0749320:CDS |
GAATATCTGAGTGGGTTATT+TGG | 0.232713 | 5_2:-2808932 | Msa0749320:three_prime_UTR |
GGCCTTCTCTATTATCAAAT+TGG | 0.244623 | 5_2:+2809751 | None:intergenic |
TCACATACTTCTCCCTCTTT+GGG | 0.245908 | 5_2:+2812840 | None:intergenic |
ACCTGAGTCTCGGGTGTACC+TGG | 0.267664 | 5_2:+2809728 | None:intergenic |
GGAGATGGGTGGGGATATTC+AGG | 0.275437 | 5_2:-2811492 | Msa0749320:CDS |
ACTGCCATTTCAACCCTCTT+TGG | 0.276071 | 5_2:+2811008 | None:intergenic |
TTCTTTGCTAGGAATAAATA+AGG | 0.280519 | 5_2:-2808982 | Msa0749320:intron |
GGGACACAGCTTCAAGTGTT+TGG | 0.288016 | 5_2:+2811627 | None:intergenic |
GTTGAACTGGCAAAGCGTTC+TGG | 0.303622 | 5_2:-2812704 | Msa0749320:CDS |
GGACACAGCTTCAAGTGTTT+GGG | 0.304917 | 5_2:+2811628 | None:intergenic |
TCAATCTCCACAGGCATTGC+TGG | 0.315953 | 5_2:+2811194 | None:intergenic |
CTCTCCGACTTAATAAATTT+GGG | 0.320360 | 5_2:+2809410 | None:intergenic |
GATAATGTTCATTCCATTGT+TGG | 0.324459 | 5_2:-2808860 | Msa0749320:three_prime_UTR |
GTCGATGGCTCTCGAATCTT+TGG | 0.325976 | 5_2:-2808899 | Msa0749320:three_prime_UTR |
GAAATGGCAGTAATTGTAAA+AGG | 0.326721 | 5_2:-2810996 | Msa0749320:CDS |
CAGCAACCATGAGGCTTCTA+AGG | 0.327625 | 5_2:-2809595 | Msa0749320:CDS |
CTGGATCACAGTTTGAATCT+AGG | 0.334427 | 5_2:-2814157 | Msa0749320:five_prime_UTR |
TTCAGAGGGCTTGCTGTTAG+AGG | 0.337080 | 5_2:-2811513 | Msa0749320:CDS |
ATAACCCACTCAGATATTCT+AGG | 0.350566 | 5_2:+2808936 | None:intergenic |
AATTGTAAAAGGAGATGTTC+AGG | 0.356652 | 5_2:-2810985 | Msa0749320:CDS |
AGTGAAAGGGAGCAAATCTA+AGG | 0.362028 | 5_2:-2809672 | Msa0749320:CDS |
AGAGGAAGCTTTACTCCTTC+AGG | 0.368367 | 5_2:-2811426 | Msa0749320:CDS |
GATCTTAAAGCACGATTTGA+TGG | 0.369791 | 5_2:-2811392 | Msa0749320:CDS |
TTATTGACTGCAACTACAAC+TGG | 0.378111 | 5_2:+2811584 | None:intergenic |
AATTTGAAGAGGACAGGCTT+AGG | 0.382248 | 5_2:-2811079 | Msa0749320:CDS |
TATGAACTTTACCAGGGCTT+TGG | 0.384079 | 5_2:-2813643 | Msa0749320:CDS |
TCAGTATCATCTGAAGTAGT+TGG | 0.393486 | 5_2:+2811038 | None:intergenic |
GACCTTGTTCGTCTCTTAAG+AGG | 0.400893 | 5_2:-2809550 | Msa0749320:CDS |
TTGCCCAGCCACCTGAGTCT+CGG | 0.408386 | 5_2:+2809718 | None:intergenic |
TGCCCAGCCACCTGAGTCTC+GGG | 0.408821 | 5_2:+2809719 | None:intergenic |
ACTCCTTCAGGCTGATATGA+TGG | 0.413624 | 5_2:-2811414 | Msa0749320:CDS |
AGTAATGCCACCAGCTTCCT+TGG | 0.417665 | 5_2:+2811808 | None:intergenic |
TGCTGCACCTCTTGCTCGCA+TGG | 0.419039 | 5_2:+2811700 | None:intergenic |
GCCTTGAAGTGATCGTAATC+AGG | 0.420528 | 5_2:+2808836 | None:intergenic |
TCAGCATCTAGGTGCCTTTG+TGG | 0.425469 | 5_2:-2811786 | Msa0749320:CDS |
ACACACTTCACAACTTCAAC+AGG | 0.426005 | 5_2:-2819348 | Msa0749320:intron |
GGGCTTGCTGTTAGAGGAGA+TGG | 0.426121 | 5_2:-2811507 | Msa0749320:CDS |
AGCGACCTCGCGAAGAGAAA+AGG | 0.432270 | 5_2:+2819373 | None:intergenic |
CAAGATATTCTCACAACTGT+TGG | 0.433729 | 5_2:-2812662 | Msa0749320:CDS |
ATTTGAAGAGGACAGGCTTA+GGG | 0.435192 | 5_2:-2811078 | Msa0749320:CDS |
CCTGAGTCTCGGGTGTACCT+GGG | 0.437418 | 5_2:+2809729 | None:intergenic |
AGGCATGACCCTTGTTGAAC+TGG | 0.440050 | 5_2:-2812717 | Msa0749320:CDS |
TTTGTGGTGGGCATGTCATC+AGG | 0.441533 | 5_2:-2811770 | Msa0749320:CDS |
TGTGGACAGCATGTGGTTGT+AGG | 0.444121 | 5_2:-2811281 | Msa0749320:CDS |
GGGACGTGTGGAGCGTCAAC+AGG | 0.446013 | 5_2:+2812794 | None:intergenic |
TGCTGTTAGAGGAGATGGGT+GGG | 0.449295 | 5_2:-2811502 | Msa0749320:CDS |
ACACCCGAGACTCAGGTGGC+TGG | 0.449642 | 5_2:-2809722 | Msa0749320:CDS |
AGAGTTTGAGCCTCTCAGTA+TGG | 0.451008 | 5_2:-2812624 | Msa0749320:CDS |
AGTGCTTAGAACAAGTAGTT+AGG | 0.451043 | 5_2:-2809436 | Msa0749320:CDS |
TGACCCATCACTGTTACAAC+TGG | 0.451970 | 5_2:+2811887 | None:intergenic |
CACTCATGTATAGGTGTGGC+TGG | 0.452414 | 5_2:-2813424 | Msa0749320:CDS |
CTGAATATCTTTGAAGTGAA+AGG | 0.453512 | 5_2:-2809686 | Msa0749320:CDS |
TTTGCTGAAGCTTGGAAAGA+AGG | 0.454649 | 5_2:-2813831 | Msa0749320:intron |
CGGGCTAGAATGCTTAGTTC+TGG | 0.456720 | 5_2:-2811113 | Msa0749320:CDS |
GTGGAGATTGAAGGGCTTCG+AGG | 0.458149 | 5_2:-2811182 | Msa0749320:CDS |
AAGGAAAAGTAGAGTGTGTA+GGG | 0.459805 | 5_2:+2819413 | None:intergenic |
AAAAGAAATTTGAAGAGGAC+AGG | 0.464360 | 5_2:-2811085 | Msa0749320:CDS |
TCCATGCTAGCTCACAAGTC+TGG | 0.464520 | 5_2:-2812895 | Msa0749320:CDS |
AGGGAGAAGTATGTGAGAAA+AGG | 0.466796 | 5_2:-2812833 | Msa0749320:CDS |
GTCTCTTAAGAGGGAGAAGC+AGG | 0.467286 | 5_2:-2809540 | Msa0749320:CDS |
GCTGGTTGCAAAGTTGTTGA+AGG | 0.470555 | 5_2:-2809632 | Msa0749320:CDS |
CTGAGTGGGTTATTTGGAAA+GGG | 0.471861 | 5_2:-2808926 | Msa0749320:three_prime_UTR |
TCCTGATTACGATCACTTCA+AGG | 0.471908 | 5_2:-2808837 | Msa0749320:three_prime_UTR |
GACCCTACCACATGCCTACA+TGG | 0.471916 | 5_2:+2813612 | None:intergenic |
TCCAATGTGTTAGTCGGAGC+TGG | 0.472988 | 5_2:-2814176 | Msa0749320:five_prime_UTR |
TTCATCAATCACTCATGTAT+AGG | 0.475254 | 5_2:-2813433 | Msa0749320:CDS |
CACATACTTCTCCCTCTTTG+GGG | 0.478433 | 5_2:+2812841 | None:intergenic |
GGTTCCAAAGAGGGTTGAAA+TGG | 0.481754 | 5_2:-2811012 | Msa0749320:CDS |
ACCAGACTTGTGAGCTAGCA+TGG | 0.483849 | 5_2:+2812894 | None:intergenic |
TGGATCACAGTTTGAATCTA+GGG | 0.483889 | 5_2:-2814156 | Msa0749320:intron |
TCATTTCTGTTGCAGGAAGT+TGG | 0.487950 | 5_2:-2811965 | Msa0749320:intron |
CACCCGAGACTCAGGTGGCT+GGG | 0.489836 | 5_2:-2809721 | Msa0749320:CDS |
CAGTATCATCTGAAGTAGTT+GGG | 0.490528 | 5_2:+2811039 | None:intergenic |
CTTCGAGGGCTGCCAATGGC+CGG | 0.490970 | 5_2:-2811167 | Msa0749320:CDS |
ATGGCGGCTTTGCTGAAGCT+TGG | 0.492064 | 5_2:-2813839 | Msa0749320:CDS |
AAGTTGGCGTCAATGTTAAG+AGG | 0.492222 | 5_2:-2811949 | Msa0749320:CDS |
TATTTCTGAGCTTGCTGCAA+TGG | 0.496708 | 5_2:-2812600 | Msa0749320:intron |
TTCAGGTATTAATTCATTGG+AGG | 0.500108 | 5_2:-2814230 | Msa0749320:intron |
TTGGTTGCAGTGACTTTACA+AGG | 0.501046 | 5_2:+2812773 | None:intergenic |
GCATCTAGGTGCCTTTGTGG+TGG | 0.501908 | 5_2:-2811783 | Msa0749320:CDS |
CCCAGGTACACCCGAGACTC+AGG | 0.503358 | 5_2:-2809729 | Msa0749320:CDS |
GGATGCAGGAAGGAAAAGAA+AGG | 0.505093 | 5_2:+2819394 | None:intergenic |
TGTTGTTCATTCTGAGGAGC+GGG | 0.508874 | 5_2:-2811132 | Msa0749320:CDS |
TGACAAAGGACGGGGTCCAT+TGG | 0.510063 | 5_2:-2811336 | Msa0749320:CDS |
GAATATATATGAACTTTACC+AGG | 0.511452 | 5_2:-2813650 | Msa0749320:CDS |
ATCACATTTCTCGACACTCC+TGG | 0.512405 | 5_2:-2811740 | Msa0749320:CDS |
TGAATATCTTTGAAGTGAAA+GGG | 0.513439 | 5_2:-2809685 | Msa0749320:CDS |
AAAGGAAAAGTAGAGTGTGT+AGG | 0.515084 | 5_2:+2819412 | None:intergenic |
TCAGTGGCAGCCAAGGAAGC+TGG | 0.515550 | 5_2:-2811818 | Msa0749320:CDS |
GACAACTTTGAATAGTCCTC+AGG | 0.516512 | 5_2:-2810934 | Msa0749320:intron |
CATCTAGGTGCCTTTGTGGT+GGG | 0.518300 | 5_2:-2811782 | Msa0749320:CDS |
GCAATGCCTGTGGAGATTGA+AGG | 0.520519 | 5_2:-2811191 | Msa0749320:CDS |
TTGCTGTTAGAGGAGATGGG+TGG | 0.521268 | 5_2:-2811503 | Msa0749320:CDS |
TCTGAGTGGGTTATTTGGAA+AGG | 0.523885 | 5_2:-2808927 | Msa0749320:three_prime_UTR |
GCATCAGCAAGATGCATGCC+TGG | 0.526145 | 5_2:-2813552 | Msa0749320:intron |
TGGCTACGTCTTCCAATAAG+TGG | 0.526211 | 5_2:+2809771 | None:intergenic |
AAAACGATAGAAATATTTGA+AGG | 0.527056 | 5_2:-2812737 | Msa0749320:CDS |
GCACTAAATGCAGCGTGACC+AGG | 0.528840 | 5_2:+2811722 | None:intergenic |
TGGGTTATTTGGAAAGGGAG+AGG | 0.529258 | 5_2:-2808921 | Msa0749320:three_prime_UTR |
AGGGCTATTAAAGATGCAGC+AGG | 0.529509 | 5_2:-2811239 | Msa0749320:CDS |
CAGAGTTATATGCTTATGAA+TGG | 0.531647 | 5_2:-2813858 | Msa0749320:exon |
TGGAGATTGAAGGGCTTCGA+GGG | 0.531700 | 5_2:-2811181 | Msa0749320:CDS |
CGAAGCCCTTCAATCTCCAC+AGG | 0.532610 | 5_2:+2811185 | None:intergenic |
TAAGAGGGAGAAGCAGGATG+TGG | 0.534191 | 5_2:-2809534 | Msa0749320:CDS |
ATAGAGTGCTGACGAAAAGC+TGG | 0.536436 | 5_2:-2809374 | Msa0749320:exon |
GAAGCCCAAATTTATTAAGT+CGG | 0.536909 | 5_2:-2809414 | Msa0749320:CDS |
ATGGCTCTCGAATCTTTGGC+AGG | 0.539391 | 5_2:-2808895 | Msa0749320:three_prime_UTR |
ACCACTCCTTAGAAGCCTCA+TGG | 0.539540 | 5_2:+2809589 | None:intergenic |
TCCTCCAGTTGTAACAGTGA+TGG | 0.540721 | 5_2:-2811891 | Msa0749320:CDS |
GCTTCTAAGGAGTGGTGAAA+TGG | 0.543450 | 5_2:-2809582 | Msa0749320:CDS |
AGCAAGACTTGACAAAGGAC+GGG | 0.546869 | 5_2:-2811345 | Msa0749320:CDS |
TGCCACTGACGTTTGACGCA+AGG | 0.548783 | 5_2:+2811832 | None:intergenic |
AGGGCTTCGAGGGCTGCCAA+TGG | 0.550201 | 5_2:-2811171 | Msa0749320:CDS |
TTTAGTGCCATGCGAGCAAG+AGG | 0.552994 | 5_2:-2811707 | Msa0749320:CDS |
TCGCGAAGAGAAAAGGATGC+AGG | 0.554217 | 5_2:+2819380 | None:intergenic |
GTGGAGCGTCAACAGGAGGC+TGG | 0.557375 | 5_2:+2812801 | None:intergenic |
AAGCAAGACTTGACAAAGGA+CGG | 0.557705 | 5_2:-2811346 | Msa0749320:CDS |
TCAAACGTCAGTGGCAGCCA+AGG | 0.557842 | 5_2:-2811825 | Msa0749320:CDS |
GGACTAAAGAATGTGGAATA+CGG | 0.557860 | 5_2:-2813390 | Msa0749320:intron |
GGTGGCATTACTCAGCATCT+AGG | 0.559213 | 5_2:-2811797 | Msa0749320:CDS |
TGTGGTTGTAGGCTCGCAGT+GGG | 0.559390 | 5_2:-2811270 | Msa0749320:CDS |
AAAACTACAGCTTGCTTCAG+AGG | 0.559700 | 5_2:-2811528 | Msa0749320:CDS |
ATGACATCGTCACCGGCCAT+TGG | 0.561870 | 5_2:+2811155 | None:intergenic |
GGACCTGATGTGAAAATAGC+TGG | 0.562195 | 5_2:-2809650 | Msa0749320:CDS |
ACCTTGTTCGTCTCTTAAGA+GGG | 0.563673 | 5_2:-2809549 | Msa0749320:CDS |
TGTCATTGTTGTTCATTCTG+AGG | 0.565978 | 5_2:-2811138 | Msa0749320:CDS |
CAATGCCTGTGGAGATTGAA+GGG | 0.566706 | 5_2:-2811190 | Msa0749320:CDS |
AAGGCAGGAACTCTAGTTTG+TGG | 0.566743 | 5_2:-2811299 | Msa0749320:CDS |
TCAACCACATATGCTTGAGC+AGG | 0.566940 | 5_2:+2811368 | None:intergenic |
ATTGTAAAAGGAGATGTTCA+GGG | 0.570554 | 5_2:-2810984 | Msa0749320:CDS |
CCTCCAGTTGTAACAGTGAT+GGG | 0.572114 | 5_2:-2811890 | Msa0749320:CDS |
GATGTGGATTCTGTGAAGAA+AGG | 0.574209 | 5_2:-2809518 | Msa0749320:CDS |
GCTGTTAGAGGAGATGGGTG+GGG | 0.576180 | 5_2:-2811501 | Msa0749320:CDS |
AACAACAATGACATCGTCAC+CGG | 0.576261 | 5_2:+2811148 | None:intergenic |
TTGATAATAGAGAAGGCCCC+AGG | 0.576931 | 5_2:-2809746 | Msa0749320:CDS |
TACTGAGGAGGTTCCAAAGA+GGG | 0.576993 | 5_2:-2811021 | Msa0749320:CDS |
AAGAGGTTACATTCAACTGA+AGG | 0.577737 | 5_2:-2811932 | Msa0749320:CDS |
AGCCAATTTGATAATAGAGA+AGG | 0.578957 | 5_2:-2809753 | Msa0749320:CDS |
AAACTACAGCTTGCTTCAGA+GGG | 0.580982 | 5_2:-2811527 | Msa0749320:CDS |
GCTCCGACTAACACATTGGA+TGG | 0.584765 | 5_2:+2814179 | None:intergenic |
GGCTTGCTGTTAGAGGAGAT+GGG | 0.584783 | 5_2:-2811506 | Msa0749320:CDS |
TCAAGAAGTGATGCAGCGTA+TGG | 0.585039 | 5_2:-2812872 | Msa0749320:CDS |
TGGTGTTGTAGCCAAAGCCC+TGG | 0.587226 | 5_2:+2813632 | None:intergenic |
TGGTCCTGCTCAAGCATATG+TGG | 0.587486 | 5_2:-2811372 | Msa0749320:CDS |
ATCGTAATCAGGACCAACAA+TGG | 0.587617 | 5_2:+2808847 | None:intergenic |
ACACCATGTAGGCATGTGGT+AGG | 0.587652 | 5_2:-2813615 | Msa0749320:CDS |
ACATACTTCTCCCTCTTTGG+GGG | 0.587717 | 5_2:+2812842 | None:intergenic |
AGTGGTGAAATGGTGTTTGA+AGG | 0.587901 | 5_2:-2809572 | Msa0749320:CDS |
AACGCTTTGCCAGTTCAACA+AGG | 0.589366 | 5_2:+2812708 | None:intergenic |
CTAGTTGTTGCTGCAGATGA+CGG | 0.590753 | 5_2:-2811659 | Msa0749320:CDS |
ATGTGGTTGTAGGCTCGCAG+TGG | 0.591331 | 5_2:-2811271 | Msa0749320:CDS |
TTTGGAAAGGGAGAGGTCGA+TGG | 0.592038 | 5_2:-2808914 | Msa0749320:three_prime_UTR |
CTGAGTCTCGGGTGTACCTG+GGG | 0.593935 | 5_2:+2809730 | None:intergenic |
GTGACTACTATAGTGAAGGC+AGG | 0.594123 | 5_2:-2811314 | Msa0749320:CDS |
AAATTTATTAAGTCGGAGAG+TGG | 0.594592 | 5_2:-2809407 | Msa0749320:CDS |
TTGTTGTTCATTCTGAGGAG+CGG | 0.596000 | 5_2:-2811133 | Msa0749320:CDS |
GAAGGAGTAAAGCTTCCTCT+AGG | 0.596889 | 5_2:+2811429 | None:intergenic |
TTGACGCAAGGCATCAAGAA+GGG | 0.602671 | 5_2:+2811844 | None:intergenic |
CCCATCACTGTTACAACTGG+AGG | 0.604246 | 5_2:+2811890 | None:intergenic |
AATGGAATGAACATTATCAA+AGG | 0.608219 | 5_2:+2808865 | None:intergenic |
TAGCCATCCAATGTGTTAGT+CGG | 0.608301 | 5_2:-2814182 | Msa0749320:five_prime_UTR |
GATCCATCATATCAGCCTGA+AGG | 0.609133 | 5_2:+2811411 | None:intergenic |
CATTGCAATGAAAATGCACA+TGG | 0.609212 | 5_2:-2808803 | Msa0749320:three_prime_UTR |
TCCAGCTCCGACTAACACAT+TGG | 0.610258 | 5_2:+2814175 | None:intergenic |
CACCATGTAGGCATGTGGTA+GGG | 0.614397 | 5_2:-2813614 | Msa0749320:CDS |
CCAATAAGTGGTAAATCACA+CGG | 0.614579 | 5_2:+2809783 | None:intergenic |
GTCAATAAATGTGATAAACC+AGG | 0.615284 | 5_2:-2811569 | Msa0749320:CDS |
TTTGAAGAGGACAGGCTTAG+GGG | 0.616568 | 5_2:-2811077 | Msa0749320:CDS |
CAATGAAAATGCACATGGAG+TGG | 0.617887 | 5_2:-2808798 | Msa0749320:three_prime_UTR |
TTCACTATAGTAGTCACCAA+TGG | 0.618438 | 5_2:+2811320 | None:intergenic |
TTTGACGCAAGGCATCAAGA+AGG | 0.619099 | 5_2:+2811843 | None:intergenic |
ACTGTTACAACTGGAGGACG+TGG | 0.619466 | 5_2:+2811896 | None:intergenic |
CTAGAATGCTTAGTTCTGGT+AGG | 0.622551 | 5_2:-2811109 | Msa0749320:CDS |
TCATCCTAGAATATCTGAGT+GGG | 0.623527 | 5_2:-2808940 | Msa0749320:three_prime_UTR |
CAATCACTCATGTATAGGTG+TGG | 0.626934 | 5_2:-2813428 | Msa0749320:CDS |
ATTGGTGACTACTATAGTGA+AGG | 0.629654 | 5_2:-2811318 | Msa0749320:CDS |
GTGATGGGTCATGTTGATCA+CGG | 0.630061 | 5_2:-2811875 | Msa0749320:CDS |
GTGAAAGGGAGCAAATCTAA+GGG | 0.630238 | 5_2:-2809671 | Msa0749320:CDS |
ACCATGAGGCTTCTAAGGAG+TGG | 0.630459 | 5_2:-2809590 | Msa0749320:CDS |
GACACAGCTTCAAGTGTTTG+GGG | 0.635718 | 5_2:+2811629 | None:intergenic |
GTGGCAGCCAAGGAAGCTGG+TGG | 0.636567 | 5_2:-2811815 | Msa0749320:CDS |
AGCAACTCCAGCAATGCCTG+TGG | 0.638181 | 5_2:-2811201 | Msa0749320:CDS |
TGCCTTGCGTCAAACGTCAG+TGG | 0.640297 | 5_2:-2811834 | Msa0749320:CDS |
AATATATATGAACTTTACCA+GGG | 0.640577 | 5_2:-2813649 | Msa0749320:CDS |
TCTAGTTTGTGGACAGCATG+TGG | 0.640880 | 5_2:-2811288 | Msa0749320:CDS |
AGTAGCGGGACTAAAGAATG+TGG | 0.642204 | 5_2:-2813397 | Msa0749320:CDS |
AGTTATATGCTTATGAATGG+CGG | 0.643946 | 5_2:-2813855 | Msa0749320:exon |
ACGTGTGGAGCGTCAACAGG+AGG | 0.644835 | 5_2:+2812797 | None:intergenic |
GTGAAGAAAGGAAATGAGTG+TGG | 0.647644 | 5_2:-2809506 | Msa0749320:CDS |
ACGCTTTGCCAGTTCAACAA+GGG | 0.649253 | 5_2:+2812709 | None:intergenic |
TACTTCAGATGATACTGAGG+AGG | 0.649683 | 5_2:-2811033 | Msa0749320:CDS |
GAAGAGAAAAGGATGCAGGA+AGG | 0.652234 | 5_2:+2819384 | None:intergenic |
CTTTGGCTACAACACCATGT+AGG | 0.658989 | 5_2:-2813626 | Msa0749320:CDS |
GTGACTTTACAAGGGACGTG+TGG | 0.659103 | 5_2:+2812782 | None:intergenic |
AACTACTTCAGATGATACTG+AGG | 0.662017 | 5_2:-2811036 | Msa0749320:CDS |
TGATGACATGCCCACCACAA+AGG | 0.668029 | 5_2:+2811772 | None:intergenic |
GCAAGACTTGACAAAGGACG+GGG | 0.668444 | 5_2:-2811344 | Msa0749320:CDS |
TGAACAGGTCAGCAACCATG+AGG | 0.674149 | 5_2:-2809604 | Msa0749320:CDS |
TCCCTCTTAAGAGACGAACA+AGG | 0.676356 | 5_2:+2809548 | None:intergenic |
AGGTACACCCGAGACTCAGG+TGG | 0.677615 | 5_2:-2809726 | Msa0749320:CDS |
TACAACACCATGTAGGCATG+TGG | 0.678395 | 5_2:-2813619 | Msa0749320:CDS |
GTCATCCTAGAATATCTGAG+TGG | 0.680125 | 5_2:-2808941 | Msa0749320:three_prime_UTR |
GACTGGACTGGATAACCTAG+AGG | 0.686970 | 5_2:-2811444 | Msa0749320:CDS |
TGGTTGCAGTGACTTTACAA+GGG | 0.689581 | 5_2:+2812774 | None:intergenic |
GGGCTATTAAAGATGCAGCA+GGG | 0.703729 | 5_2:-2811238 | Msa0749320:CDS |
TCAGAAATATCCATACTGAG+AGG | 0.707747 | 5_2:+2812614 | None:intergenic |
GTTGAAGCAAGACTTGACAA+AGG | 0.724961 | 5_2:-2811350 | Msa0749320:CDS |
ATACTGAGGAGGTTCCAAAG+AGG | 0.728916 | 5_2:-2811022 | Msa0749320:CDS |
CTATTAAAGATGCAGCAGGG+AGG | 0.743526 | 5_2:-2811235 | Msa0749320:CDS |
GTGGTTGTAGGCTCGCAGTG+GGG | 0.772193 | 5_2:-2811269 | Msa0749320:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAACTTTTAAGAATTTATTT+TGG | + | chr5_2:2811320-2811339 | None:intergenic | 10.0% |
!! | ATATGTTTATACAAAATATT+TGG | - | chr5_2:2811885-2811904 | Msa0749320:CDS | 10.0% |
!!! | TTTTAACTAATTATTTTCTA+AGG | - | chr5_2:2813879-2813898 | Msa0749320:intron | 10.0% |
!! | ATAAAGAATTAAATTTGACA+TGG | - | chr5_2:2809737-2809756 | Msa0749320:CDS | 15.0% |
!! | TAAAGAATTAAATTTGACAT+GGG | - | chr5_2:2809738-2809757 | Msa0749320:CDS | 15.0% |
!! | AAAAAAGTGAGTTAATTTAT+AGG | + | chr5_2:2810173-2810192 | None:intergenic | 15.0% |
!!! | AATTAACTCACTTTTTTATT+TGG | - | chr5_2:2810176-2810195 | Msa0749320:intron | 15.0% |
!! | AATATAAGGTATAAAAGAAA+AGG | + | chr5_2:2810746-2810765 | None:intergenic | 15.0% |
!!! | TCTTTTCATATTAGAATTTT+TGG | - | chr5_2:2811071-2811090 | Msa0749320:CDS | 15.0% |
!! | TATGTTATAATAGCAAATAT+CGG | + | chr5_2:2811137-2811156 | None:intergenic | 15.0% |
!! | AGATTATAATAAAATTGTGT+TGG | - | chr5_2:2811156-2811175 | Msa0749320:CDS | 15.0% |
!!! | ATTATTGTATGCAATATTTT+AGG | - | chr5_2:2811515-2811534 | Msa0749320:CDS | 15.0% |
!!! | AAATAACAATTTAGAATTGT+AGG | - | chr5_2:2811605-2811624 | Msa0749320:CDS | 15.0% |
!!! | TTATACAAAATATTTGGTTT+TGG | - | chr5_2:2811891-2811910 | Msa0749320:CDS | 15.0% |
!!! | TATACAAAATATTTGGTTTT+GGG | - | chr5_2:2811892-2811911 | Msa0749320:CDS | 15.0% |
!! | AAAATAATAAAACATATGCT+TGG | + | chr5_2:2812847-2812866 | None:intergenic | 15.0% |
!! | ATACTATATATAACTAGTTA+TGG | - | chr5_2:2813488-2813507 | Msa0749320:intron | 15.0% |
!!! | TTCTTTTATGAATATCTTAA+AGG | + | chr5_2:2814203-2814222 | None:intergenic | 15.0% |
!!! | TTTTGTAAATAATTTGCATT+TGG | - | chr5_2:2814312-2814331 | Msa0749320:intron | 15.0% |
!!! | TTTACACAATTTAAAATGAA+AGG | + | chr5_2:2814427-2814446 | None:intergenic | 15.0% |
!! | TGGTTATTATAACTATAATA+TGG | - | chr5_2:2817299-2817318 | Msa0749320:intron | 15.0% |
!! | TTTATTTATATCTCAACATT+TGG | + | chr5_2:2817581-2817600 | None:intergenic | 15.0% |
!! | TAAAGTAGAATATATTGAAT+TGG | - | chr5_2:2818118-2818137 | Msa0749320:intron | 15.0% |
!! | AAAGTAGAATATATTGAATT+GGG | - | chr5_2:2818119-2818138 | Msa0749320:intron | 15.0% |
!! | GTATTAATTAGAGTTATAAT+TGG | - | chr5_2:2818155-2818174 | Msa0749320:intron | 15.0% |
!!! | ATTTAGTCTTTAAAATTGTA+AGG | + | chr5_2:2818306-2818325 | None:intergenic | 15.0% |
!!! | TACAATTTTAAAGACTAAAT+TGG | - | chr5_2:2818306-2818325 | Msa0749320:intron | 15.0% |
!! | TAATTATATACCATTTCAAA+AGG | - | chr5_2:2819066-2819085 | Msa0749320:intron | 15.0% |
!! | AAACTAGCTATAACATAAAA+AGG | + | chr5_2:2809646-2809665 | None:intergenic | 20.0% |
!! | TACTATCTTCAAATGAATTT+GGG | + | chr5_2:2809717-2809736 | None:intergenic | 20.0% |
!! | TTACTATCTTCAAATGAATT+TGG | + | chr5_2:2809718-2809737 | None:intergenic | 20.0% |
!!! | TAGAATACAATATTTTTGTC+AGG | - | chr5_2:2809838-2809857 | Msa0749320:intron | 20.0% |
!!! | AGAATACAATATTTTTGTCA+GGG | - | chr5_2:2809839-2809858 | Msa0749320:intron | 20.0% |
!! | TAATTTATAGGTAATCTTTG+AGG | + | chr5_2:2810161-2810180 | None:intergenic | 20.0% |
!!! | TATTTTTTAGAATTTGGGTT+GGG | + | chr5_2:2810402-2810421 | None:intergenic | 20.0% |
!!! | TTATTTTTTAGAATTTGGGT+TGG | + | chr5_2:2810403-2810422 | None:intergenic | 20.0% |
!!! | CTTAAAAGTTTAAGTTTTGA+AGG | - | chr5_2:2811329-2811348 | Msa0749320:CDS | 20.0% |
!!! | TCTATTCCAATTGTTTATTT+TGG | - | chr5_2:2811994-2812013 | Msa0749320:intron | 20.0% |
!!! | CTATTCCAATTGTTTATTTT+GGG | - | chr5_2:2811995-2812014 | Msa0749320:intron | 20.0% |
!!! | AAAATTTTGTGAGTTTTACT+TGG | - | chr5_2:2812047-2812066 | Msa0749320:intron | 20.0% |
!!! | TTACTTGGATTAGTAAATTT+CGG | - | chr5_2:2812062-2812081 | Msa0749320:intron | 20.0% |
!!! | ATTTTAACTCTAAATGGTTT+GGG | + | chr5_2:2812124-2812143 | None:intergenic | 20.0% |
!!! | AATTTTAACTCTAAATGGTT+TGG | + | chr5_2:2812125-2812144 | None:intergenic | 20.0% |
!! | TAATTATAAGTGTAGTTAAG+AGG | - | chr5_2:2812161-2812180 | Msa0749320:intron | 20.0% |
!! | AATTCTTATCAGAATTTATC+AGG | + | chr5_2:2812276-2812295 | None:intergenic | 20.0% |
!! | TACCAAGTTATAAAACTAAA+GGG | + | chr5_2:2812815-2812834 | None:intergenic | 20.0% |
!! | TTACCAAGTTATAAAACTAA+AGG | + | chr5_2:2812816-2812835 | None:intergenic | 20.0% |
!! | TAATTCTTCAATAATGATGA+TGG | + | chr5_2:2812950-2812969 | None:intergenic | 20.0% |
!!! | ATGGATTTAAAGAAGTATAT+GGG | - | chr5_2:2813106-2813125 | Msa0749320:intron | 20.0% |
!!! | AGATAATTTAAAGACTTGTT+TGG | - | chr5_2:2813174-2813193 | Msa0749320:intron | 20.0% |
!! | TGAAAAAACAAGTAAGTTAA+AGG | - | chr5_2:2813530-2813549 | Msa0749320:intron | 20.0% |
!! | TAAAAATGATCATTCAATTG+TGG | - | chr5_2:2813607-2813626 | Msa0749320:CDS | 20.0% |
!! | AAAAATGATCATTCAATTGT+GGG | - | chr5_2:2813608-2813627 | Msa0749320:CDS | 20.0% |
!!! | ATTTTCAGGTATTAATTCAT+TGG | - | chr5_2:2813970-2813989 | Msa0749320:intron | 20.0% |
!! | TTATTAAGTTTCATTTGAAG+TGG | - | chr5_2:2814125-2814144 | Msa0749320:intron | 20.0% |
!! | ATTTACAAAAAAGATAGAGA+CGG | + | chr5_2:2814302-2814321 | None:intergenic | 20.0% |
!! | CTATATACACTAATTATTAC+AGG | + | chr5_2:2814488-2814507 | None:intergenic | 20.0% |
!! | AATATATATGAACTTTACCA+GGG | - | chr5_2:2814554-2814573 | Msa0749320:intron | 20.0% |
!! | GCTAATAATACTGTAATAAA+TGG | - | chr5_2:2815102-2815121 | Msa0749320:intron | 20.0% |
!!! | TAATTAGTTTTGTTTTACGT+TGG | - | chr5_2:2815277-2815296 | Msa0749320:intron | 20.0% |
!!! | AATATTTCTATCGTTTTATC+AGG | + | chr5_2:2815463-2815482 | None:intergenic | 20.0% |
!! | AAAACGATAGAAATATTTGA+AGG | - | chr5_2:2815466-2815485 | Msa0749320:intron | 20.0% |
!! | ATTGTAGCATTATTATACTT+GGG | - | chr5_2:2816058-2816077 | Msa0749320:intron | 20.0% |
!! | AGAAATAAGGCAAAAAAAAA+AGG | + | chr5_2:2816094-2816113 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTGCCTTATTTC+TGG | - | chr5_2:2816093-2816112 | Msa0749320:intron | 20.0% |
!! | ACAAGTAAATATAAAACAGT+AGG | - | chr5_2:2817430-2817449 | Msa0749320:intron | 20.0% |
!! | TGATTACTCTTAGTTAAATA+CGG | + | chr5_2:2817859-2817878 | None:intergenic | 20.0% |
!!! | GACTGAAAATTTTCAAATTT+AGG | + | chr5_2:2817949-2817968 | None:intergenic | 20.0% |
!!! | GGACAATATTTTTTTACTAA+TGG | - | chr5_2:2818228-2818247 | Msa0749320:intron | 20.0% |
!!! | TCTGTATTTAACAGTTATTT+TGG | + | chr5_2:2818901-2818920 | None:intergenic | 20.0% |
!! | AAATAACTGTTAAATACAGA+TGG | - | chr5_2:2818901-2818920 | Msa0749320:intron | 20.0% |
!!! | TAGTTTGTTAGTTTGATTGT+TGG | - | chr5_2:2809222-2809241 | Msa0749320:intron | 25.0% |
!!! | TCCACATAATTTTGAAAACT+CGG | + | chr5_2:2809449-2809468 | None:intergenic | 25.0% |
!! | AATGAATTTGGGGTAATATA+TGG | + | chr5_2:2809706-2809725 | None:intergenic | 25.0% |
! | ACTATCTTCAAATGAATTTG+GGG | + | chr5_2:2809716-2809735 | None:intergenic | 25.0% |
!! | TATAGTATAGAGGATTTTGA+TGG | + | chr5_2:2809945-2809964 | None:intergenic | 25.0% |
! | TATTTAGTGTTGTCAAATAG+CGG | + | chr5_2:2809971-2809990 | None:intergenic | 25.0% |
!! | TAGAGCTAATTTTGCTTTAT+AGG | - | chr5_2:2809998-2810017 | Msa0749320:intron | 25.0% |
! | TATTTGGTATTATTTCACTG+CGG | - | chr5_2:2810192-2810211 | Msa0749320:intron | 25.0% |
!! | AAAAGTGCAAAAGATCAAAA+AGG | + | chr5_2:2810675-2810694 | None:intergenic | 25.0% |
! | TAGACTATGACACTAATATA+AGG | + | chr5_2:2810760-2810779 | None:intergenic | 25.0% |
!!! | TTTAAGTTTTGAAGGTCTAA+AGG | - | chr5_2:2811337-2811356 | Msa0749320:CDS | 25.0% |
! | AAGGTCTAAAGGTAATATAA+TGG | - | chr5_2:2811348-2811367 | Msa0749320:CDS | 25.0% |
! | CATTGAATTCCTAATCAAAT+TGG | - | chr5_2:2811375-2811394 | Msa0749320:CDS | 25.0% |
!!! | AAGTCATTGGTTTAAATTGT+GGG | - | chr5_2:2811413-2811432 | Msa0749320:CDS | 25.0% |
!!! | TGTTTTATTGCCTTACAATT+AGG | - | chr5_2:2811467-2811486 | Msa0749320:CDS | 25.0% |
!!! | GTTTTATTGCCTTACAATTA+GGG | - | chr5_2:2811468-2811487 | Msa0749320:CDS | 25.0% |
!!! | TATTTTATGATAACGAACGA+CGG | - | chr5_2:2811565-2811584 | Msa0749320:CDS | 25.0% |
! | TATCTTAGATTACAATCAAG+AGG | + | chr5_2:2811732-2811751 | None:intergenic | 25.0% |
! | TACACACCTTAAAATCAATT+AGG | - | chr5_2:2811750-2811769 | Msa0749320:CDS | 25.0% |
!! | TTTTCTGTAATGCTTCTAAA+AGG | + | chr5_2:2811825-2811844 | None:intergenic | 25.0% |
!!! | TGTTATGCTTTAAAAGTACT+CGG | - | chr5_2:2811965-2811984 | Msa0749320:intron | 25.0% |
!!! | TACTTGGATTAGTAAATTTC+GGG | - | chr5_2:2812063-2812082 | Msa0749320:intron | 25.0% |
!!! | GGGACAAAATTCATTTTAAT+GGG | - | chr5_2:2812084-2812103 | Msa0749320:intron | 25.0% |
!!! | GGACAAAATTCATTTTAATG+GGG | - | chr5_2:2812085-2812104 | Msa0749320:intron | 25.0% |
!!! | GCACTAATTTTAACTCTAAA+TGG | + | chr5_2:2812130-2812149 | None:intergenic | 25.0% |
! | ATTAGAGCTAACAATATCTA+AGG | - | chr5_2:2812207-2812226 | Msa0749320:intron | 25.0% |
! | TTAGAGCTAACAATATCTAA+GGG | - | chr5_2:2812208-2812227 | Msa0749320:intron | 25.0% |
! | AATATCTAAGGGGTAAAATA+TGG | - | chr5_2:2812219-2812238 | Msa0749320:intron | 25.0% |
!! | AGAGTGTTTATGTTATTGTA+AGG | - | chr5_2:2812600-2812619 | Msa0749320:intron | 25.0% |
! | TTTATGTTATTGTAAGGCAA+GGG | - | chr5_2:2812606-2812625 | Msa0749320:CDS | 25.0% |
! | AAAAAGATAGGAAAAGATCT+AGG | - | chr5_2:2812664-2812683 | Msa0749320:CDS | 25.0% |
! | ACCAAGTTATAAAACTAAAG+GGG | + | chr5_2:2812814-2812833 | None:intergenic | 25.0% |
! | AAAACATATGCTTGGATTTA+TGG | + | chr5_2:2812839-2812858 | None:intergenic | 25.0% |
!!! | TTATTTTAGTTGTTCAGATG+TGG | - | chr5_2:2812860-2812879 | Msa0749320:CDS | 25.0% |
!! | TATTTGACATTGATAGTTCA+TGG | - | chr5_2:2813087-2813106 | Msa0749320:intron | 25.0% |
!! | CATGGATTTAAAGAAGTATA+TGG | - | chr5_2:2813105-2813124 | Msa0749320:intron | 25.0% |
!! | TTTAAAGACTTGTTTGGAAT+TGG | - | chr5_2:2813180-2813199 | Msa0749320:intron | 25.0% |
! | AAAATGATCATTCAATTGTG+GGG | - | chr5_2:2813609-2813628 | Msa0749320:CDS | 25.0% |
! | CAGTAAAGTATGCTAAAAAA+CGG | + | chr5_2:2813683-2813702 | None:intergenic | 25.0% |
!!! | ACATGTTGTTGTTTATTTTC+AGG | - | chr5_2:2813956-2813975 | Msa0749320:intron | 25.0% |
! | GAATATATATGAACTTTACC+AGG | - | chr5_2:2814553-2814572 | Msa0749320:intron | 25.0% |
! | TGATTACATTACAGTTTAGA+TGG | - | chr5_2:2814875-2814894 | Msa0749320:intron | 25.0% |
! | ATTACAGTTTAGATGGTTTA+AGG | - | chr5_2:2814882-2814901 | Msa0749320:intron | 25.0% |
! | AGATATGCATAAAATTACAG+AGG | - | chr5_2:2814967-2814986 | Msa0749320:intron | 25.0% |
! | GATATGCATAAAATTACAGA+GGG | - | chr5_2:2814968-2814987 | Msa0749320:intron | 25.0% |
! | ACAAAGCAGTACATAAATTA+CGG | + | chr5_2:2815014-2815033 | None:intergenic | 25.0% |
!!! | AATCACACAAATTTTAGCAT+TGG | + | chr5_2:2815170-2815189 | None:intergenic | 25.0% |
! | AGTGACATTAGTTGAAAATT+TGG | - | chr5_2:2815206-2815225 | Msa0749320:intron | 25.0% |
! | GATGTTAAATCAGTGAATAT+AGG | - | chr5_2:2815648-2815667 | Msa0749320:intron | 25.0% |
!!! | AATGTTTTGATGGAAATCAA+TGG | - | chr5_2:2815860-2815879 | Msa0749320:intron | 25.0% |
!!! | CTTTTCCTTAAATTGATAGT+TGG | - | chr5_2:2815896-2815915 | Msa0749320:intron | 25.0% |
! | AATATGCATAGGAAAGTAAA+AGG | - | chr5_2:2815961-2815980 | Msa0749320:intron | 25.0% |
! | ATATGCATAGGAAAGTAAAA+GGG | - | chr5_2:2815962-2815981 | Msa0749320:intron | 25.0% |
! | AATAAGTAATCGATAGTACT+AGG | - | chr5_2:2815986-2816005 | Msa0749320:intron | 25.0% |
! | GTATAATAATGCTACAATGA+TGG | + | chr5_2:2816056-2816075 | None:intergenic | 25.0% |
! | CATTGTAGCATTATTATACT+TGG | - | chr5_2:2816057-2816076 | Msa0749320:intron | 25.0% |
! | TCATGTAGTTCAAAACAAAA+AGG | + | chr5_2:2816166-2816185 | None:intergenic | 25.0% |
!!! | GAACTACATGATGATTTTTT+AGG | - | chr5_2:2816175-2816194 | Msa0749320:intron | 25.0% |
! | TAGGAAAAAGAAATTTGAAG+AGG | - | chr5_2:2817113-2817132 | Msa0749320:intron | 25.0% |
! | ACAACAGATAGTGTATTATT+CGG | - | chr5_2:2817390-2817409 | Msa0749320:intron | 25.0% |
! | ATGCTTCAACAGAAAAAAAA+GGG | + | chr5_2:2817530-2817549 | None:intergenic | 25.0% |
! | CTAACAATGAAATTACAGAA+TGG | + | chr5_2:2817669-2817688 | None:intergenic | 25.0% |
! | CATTCTGTAATTTCATTGTT+AGG | - | chr5_2:2817667-2817686 | Msa0749320:intron | 25.0% |
! | GATTACTCTTAGTTAAATAC+GGG | + | chr5_2:2817858-2817877 | None:intergenic | 25.0% |
!! | TTTTCTTAATCTGTGTGAAA+TGG | + | chr5_2:2818020-2818039 | None:intergenic | 25.0% |
! | TAGTAAAAAAATATTGTCCC+AGG | + | chr5_2:2818227-2818246 | None:intergenic | 25.0% |
! | ATTTCTATTTGATATCCGTT+TGG | - | chr5_2:2818368-2818387 | Msa0749320:intron | 25.0% |
!!! | TGAATATCTTTGAAGTGAAA+GGG | - | chr5_2:2818518-2818537 | Msa0749320:intron | 25.0% |
! | TTGGTATACAAACTACTTAA+AGG | + | chr5_2:2818958-2818977 | None:intergenic | 25.0% |
! | AATGCACATATCAAAAAACT+TGG | + | chr5_2:2818977-2818996 | None:intergenic | 25.0% |
! | CGTAATACTTCTTATTAAGA+AGG | + | chr5_2:2819101-2819120 | None:intergenic | 25.0% |
!!! | TTAATAAGAAGTATTACGAG+AGG | - | chr5_2:2819103-2819122 | Msa0749320:intron | 25.0% |
! | TTCTTTGCTAGGAATAAATA+AGG | - | chr5_2:2819221-2819240 | Msa0749320:intron | 25.0% |
! | AATGGAATGAACATTATCAA+AGG | + | chr5_2:2819341-2819360 | None:intergenic | 25.0% |
ACATAACTGCTGAAAATGAA+AGG | + | chr5_2:2809054-2809073 | None:intergenic | 30.0% | |
! | ACTTAGAATGGCTCTATTTA+TGG | + | chr5_2:2809266-2809285 | None:intergenic | 30.0% |
!! | TAGTCCATATTGGCTTTAAA+TGG | - | chr5_2:2809363-2809382 | Msa0749320:three_prime_UTR | 30.0% |
!! | AGTCCATATTGGCTTTAAAT+GGG | - | chr5_2:2809364-2809383 | Msa0749320:three_prime_UTR | 30.0% |
AATTGATATCCCAGATTAGT+TGG | - | chr5_2:2809408-2809427 | Msa0749320:CDS | 30.0% | |
! | ACCGAGTTTTCAAAATTATG+TGG | - | chr5_2:2809445-2809464 | Msa0749320:CDS | 30.0% |
TGGAAGTTAAGATTGAGATT+AGG | - | chr5_2:2809465-2809484 | Msa0749320:CDS | 30.0% | |
TAAGATTGAGATTAGGACTT+CGG | - | chr5_2:2809472-2809491 | Msa0749320:CDS | 30.0% | |
! | TCGTTTAATGTTGATTGTTG+AGG | - | chr5_2:2809620-2809639 | Msa0749320:CDS | 30.0% |
! | TGCATCACGTTTTATGTTTA+AGG | - | chr5_2:2809806-2809825 | Msa0749320:intron | 30.0% |
ATTGATCGAATAGCAAAACT+AGG | - | chr5_2:2809893-2809912 | Msa0749320:intron | 30.0% | |
! | CTAATTTTGCTTTATAGGTC+AGG | - | chr5_2:2810003-2810022 | Msa0749320:intron | 30.0% |
! | AGGTTGATTGATGCATATTA+TGG | - | chr5_2:2810023-2810042 | Msa0749320:intron | 30.0% |
TTGATGCATATTATGGCTTT+AGG | - | chr5_2:2810030-2810049 | Msa0749320:intron | 30.0% | |
AAAGAAGCTTTCTTCAGAAA+AGG | + | chr5_2:2810131-2810150 | None:intergenic | 30.0% | |
TGTGTAGTGTTTATACAGTT+TGG | - | chr5_2:2810332-2810351 | Msa0749320:intron | 30.0% | |
GTGTAGTGTTTATACAGTTT+GGG | - | chr5_2:2810333-2810352 | Msa0749320:intron | 30.0% | |
TAACTCAACCTTATAAAACC+CGG | + | chr5_2:2810377-2810396 | None:intergenic | 30.0% | |
TATACAAACTGCTCTAATGA+TGG | + | chr5_2:2810443-2810462 | None:intergenic | 30.0% | |
! | ATCTTTTGCACTTTTGTGAT+TGG | - | chr5_2:2810680-2810699 | Msa0749320:intron | 30.0% |
TGTTGTTGCTCAAATTTCTT+TGG | - | chr5_2:2810713-2810732 | Msa0749320:intron | 30.0% | |
TGCTATTCTTCGTAGATATT+AGG | - | chr5_2:2810964-2810983 | Msa0749320:CDS | 30.0% | |
GAAACAAGATTGACAGATTA+GGG | - | chr5_2:2810986-2811005 | Msa0749320:CDS | 30.0% | |
AAACAAGATTGACAGATTAG+GGG | - | chr5_2:2810987-2811006 | Msa0749320:CDS | 30.0% | |
GGACTAAAACCAATTTGATT+AGG | + | chr5_2:2811387-2811406 | None:intergenic | 30.0% | |
!!! | CAAATTGGTTTTAGTCCTAA+TGG | - | chr5_2:2811390-2811409 | Msa0749320:CDS | 30.0% |
TTAAACCAATGACTTCCATT+AGG | + | chr5_2:2811408-2811427 | None:intergenic | 30.0% | |
!! | GAAGTCATTGGTTTAAATTG+TGG | - | chr5_2:2811412-2811431 | Msa0749320:CDS | 30.0% |
!!! | ATTTTAGGTTGTTGTTTCTC+TGG | - | chr5_2:2811530-2811549 | Msa0749320:CDS | 30.0% |
! | TTTAAATCTAAAGTAACCCG+TGG | + | chr5_2:2811645-2811664 | None:intergenic | 30.0% |
TTTGGACTTACGTATTGTAT+AGG | + | chr5_2:2811669-2811688 | None:intergenic | 30.0% | |
!! | ACGGATCCTAATTGATTTTA+AGG | + | chr5_2:2811759-2811778 | None:intergenic | 30.0% |
!! | GTTGCGCTTTTTGATTAAAA+CGG | + | chr5_2:2811778-2811797 | None:intergenic | 30.0% |
!!! | ACAAAATATTTGGTTTTGGG+TGG | - | chr5_2:2811895-2811914 | Msa0749320:CDS | 30.0% |
ACTCATTTCATCTACCAAAA+AGG | + | chr5_2:2811926-2811945 | None:intergenic | 30.0% | |
GGTAGATGAAATGAGTAATT+TGG | - | chr5_2:2811930-2811949 | Msa0749320:CDS | 30.0% | |
TGTTGCCCAAAATAAACAAT+TGG | + | chr5_2:2812003-2812022 | None:intergenic | 30.0% | |
!! | ACTTGGATTAGTAAATTTCG+GGG | - | chr5_2:2812064-2812083 | Msa0749320:intron | 30.0% |
! | GGGGACAAAATTCATTTTAA+TGG | - | chr5_2:2812083-2812102 | Msa0749320:intron | 30.0% |
GTTAAAATTAGTGCTTAAGC+AGG | - | chr5_2:2812136-2812155 | Msa0749320:intron | 30.0% | |
TAGAGCTAACAATATCTAAG+GGG | - | chr5_2:2812209-2812228 | Msa0749320:intron | 30.0% | |
ATAGAATTTGCCCAAAATAG+CGG | - | chr5_2:2812324-2812343 | Msa0749320:intron | 30.0% | |
CGTTTCTATGTGAATTAGTA+TGG | - | chr5_2:2812384-2812403 | Msa0749320:intron | 30.0% | |
CTCTTGAATTGCTTATTTGT+GGG | + | chr5_2:2812462-2812481 | None:intergenic | 30.0% | |
TCTCTTGAATTGCTTATTTG+TGG | + | chr5_2:2812463-2812482 | None:intergenic | 30.0% | |
!!! | TTGTTGATTTTGGTTTGGAA+TGG | + | chr5_2:2812557-2812576 | None:intergenic | 30.0% |
GTTTATGTTATTGTAAGGCA+AGG | - | chr5_2:2812605-2812624 | Msa0749320:CDS | 30.0% | |
GTGGAAATTATGAGAAATTG+AGG | - | chr5_2:2812690-2812709 | Msa0749320:CDS | 30.0% | |
CATCATTAACCTAGAATTAG+AGG | - | chr5_2:2812782-2812801 | Msa0749320:CDS | 30.0% | |
!!! | TCCCCTTTAGTTTTATAACT+TGG | - | chr5_2:2812810-2812829 | Msa0749320:CDS | 30.0% |
! | TGTTTGGAATTGGATTAAGA+TGG | - | chr5_2:2813190-2813209 | Msa0749320:intron | 30.0% |
TAGGATATTTCCTAGTTAGT+CGG | - | chr5_2:2813457-2813476 | Msa0749320:intron | 30.0% | |
TCAGAAAACAGTAAAGTAGA+TGG | - | chr5_2:2813646-2813665 | Msa0749320:CDS | 30.0% | |
CAGAAAACAGTAAAGTAGAT+GGG | - | chr5_2:2813647-2813666 | Msa0749320:CDS | 30.0% | |
AGAAAACAGTAAAGTAGATG+GGG | - | chr5_2:2813648-2813667 | Msa0749320:CDS | 30.0% | |
!!! | CGTTTTTTAGCATACTTTAC+TGG | - | chr5_2:2813681-2813700 | Msa0749320:intron | 30.0% |
! | TTTTAGCATACTTTACTGGT+AGG | - | chr5_2:2813685-2813704 | Msa0749320:intron | 30.0% |
ATTTATACTTCATCCCTCTT+TGG | - | chr5_2:2813906-2813925 | Msa0749320:intron | 30.0% | |
TTTATACTTCATCCCTCTTT+GGG | - | chr5_2:2813907-2813926 | Msa0749320:intron | 30.0% | |
TTCAGGTATTAATTCATTGG+AGG | - | chr5_2:2813973-2813992 | Msa0749320:intron | 30.0% | |
! | TAAGTTTCATTTGAAGTGGA+AGG | - | chr5_2:2814129-2814148 | Msa0749320:intron | 30.0% |
CAGAGTTATATGCTTATGAA+TGG | - | chr5_2:2814345-2814364 | Msa0749320:intron | 30.0% | |
AGTTATATGCTTATGAATGG+CGG | - | chr5_2:2814348-2814367 | Msa0749320:intron | 30.0% | |
! | CAATTTAAAATGAAAGGAGC+TGG | + | chr5_2:2814421-2814440 | None:intergenic | 30.0% |
CTGCATTCAGATGATAAAAA+GGG | + | chr5_2:2814532-2814551 | None:intergenic | 30.0% | |
TCTGCATTCAGATGATAAAA+AGG | + | chr5_2:2814533-2814552 | None:intergenic | 30.0% | |
TTCATCAATCACTCATGTAT+AGG | - | chr5_2:2814770-2814789 | Msa0749320:intron | 30.0% | |
!! | AGTTGATAGGTATACTACAT+CGG | - | chr5_2:2815035-2815054 | Msa0749320:intron | 30.0% |
AATATTCCTGATTGGTAGAT+TGG | - | chr5_2:2815062-2815081 | Msa0749320:intron | 30.0% | |
ATATTCCTGATTGGTAGATT+GGG | - | chr5_2:2815063-2815082 | Msa0749320:intron | 30.0% | |
AAAATTTGTGTGATTGCACA+TGG | - | chr5_2:2815175-2815194 | Msa0749320:intron | 30.0% | |
GGTACTTATAAGTAAAAAGC+TGG | - | chr5_2:2815227-2815246 | Msa0749320:intron | 30.0% | |
! | CGTTTTATCAGGATTAGATT+TGG | + | chr5_2:2815452-2815471 | None:intergenic | 30.0% |
AACATCATCTATGACTAAGA+AGG | + | chr5_2:2815634-2815653 | None:intergenic | 30.0% | |
AAAGGCTAACAAACAAGTAT+TGG | + | chr5_2:2815696-2815715 | None:intergenic | 30.0% | |
! | TGTCATTTACAAATGGGAAA+AGG | + | chr5_2:2815714-2815733 | None:intergenic | 30.0% |
! | ACAAGCTGTCATTTACAAAT+GGG | + | chr5_2:2815720-2815739 | None:intergenic | 30.0% |
! | AACAAGCTGTCATTTACAAA+TGG | + | chr5_2:2815721-2815740 | None:intergenic | 30.0% |
! | TTTGTAAATGACAGCTTGTT+AGG | - | chr5_2:2815721-2815740 | Msa0749320:intron | 30.0% |
!! | TTGTAAATGACAGCTTGTTA+GGG | - | chr5_2:2815722-2815741 | Msa0749320:intron | 30.0% |
!!! | TTTTTAGCTGCTTGAGATAA+AGG | - | chr5_2:2815829-2815848 | Msa0749320:intron | 30.0% |
CAATGCCAACTATCAATTTA+AGG | + | chr5_2:2815904-2815923 | None:intergenic | 30.0% | |
! | CTTAAATTGATAGTTGGCAT+TGG | - | chr5_2:2815902-2815921 | Msa0749320:intron | 30.0% |
TGTAGTTCAAAACAAAAAGG+AGG | + | chr5_2:2816163-2816182 | None:intergenic | 30.0% | |
!!! | ATTTTTTAGGTTCCTGTTTG+TGG | - | chr5_2:2816188-2816207 | Msa0749320:intron | 30.0% |
GAAAACAAATATCCACAAAC+AGG | + | chr5_2:2816203-2816222 | None:intergenic | 30.0% | |
! | AATTTGTTCATTTCTGTTGC+AGG | - | chr5_2:2816231-2816250 | Msa0749320:intron | 30.0% |
!! | TACATTAGCTGATTTTGCAT+GGG | + | chr5_2:2816599-2816618 | None:intergenic | 30.0% |
GTCAATAAATGTGATAAACC+AGG | - | chr5_2:2816634-2816653 | Msa0749320:intron | 30.0% | |
!!! | AGCTGTAGTTTTACTTTTTC+AGG | + | chr5_2:2816667-2816686 | None:intergenic | 30.0% |
AAAAGAAATTTGAAGAGGAC+AGG | - | chr5_2:2817118-2817137 | Msa0749320:intron | 30.0% | |
GAAATGGCAGTAATTGTAAA+AGG | - | chr5_2:2817207-2817226 | Msa0749320:intron | 30.0% | |
AATTGTAAAAGGAGATGTTC+AGG | - | chr5_2:2817218-2817237 | Msa0749320:intron | 30.0% | |
ATTGTAAAAGGAGATGTTCA+GGG | - | chr5_2:2817219-2817238 | Msa0749320:intron | 30.0% | |
AATACACTATCTGTTGTTGA+CGG | + | chr5_2:2817387-2817406 | None:intergenic | 30.0% | |
TAAGATCACATTAATCAGCA+TGG | - | chr5_2:2817483-2817502 | Msa0749320:intron | 30.0% | |
CATGCTTCAACAGAAAAAAA+AGG | + | chr5_2:2817531-2817550 | None:intergenic | 30.0% | |
ATATCTCAACATTTGGACAA+AGG | + | chr5_2:2817574-2817593 | None:intergenic | 30.0% | |
TCTTAGTTAAATACGGGAAA+AGG | + | chr5_2:2817852-2817871 | None:intergenic | 30.0% | |
GTTGACGTCTTATAATCTTA+GGG | + | chr5_2:2817892-2817911 | None:intergenic | 30.0% | |
AGTTGACGTCTTATAATCTT+AGG | + | chr5_2:2817893-2817912 | None:intergenic | 30.0% | |
TACTAATGGCTCAGTTATTA+AGG | - | chr5_2:2818242-2818261 | Msa0749320:intron | 30.0% | |
ACTAATGGCTCAGTTATTAA+GGG | - | chr5_2:2818243-2818262 | Msa0749320:intron | 30.0% | |
TATTTGATATCCGTTTGGTT+TGG | - | chr5_2:2818373-2818392 | Msa0749320:intron | 30.0% | |
! | AGCCAATTTGATAATAGAGA+AGG | - | chr5_2:2818450-2818469 | Msa0749320:intron | 30.0% |
!! | CTGAATATCTTTGAAGTGAA+AGG | - | chr5_2:2818517-2818536 | Msa0749320:intron | 30.0% |
! | AACTGTTGTGATTTTCAGAT+TGG | - | chr5_2:2818733-2818752 | Msa0749320:intron | 30.0% |
GAAGCCCAAATTTATTAAGT+CGG | - | chr5_2:2818789-2818808 | Msa0749320:intron | 30.0% | |
CTCTCCGACTTAATAAATTT+GGG | + | chr5_2:2818796-2818815 | None:intergenic | 30.0% | |
ACTCTCCGACTTAATAAATT+TGG | + | chr5_2:2818797-2818816 | None:intergenic | 30.0% | |
AAATTTATTAAGTCGGAGAG+TGG | - | chr5_2:2818796-2818815 | Msa0749320:intron | 30.0% | |
TGCGTTTATGAATTACACAT+TGG | - | chr5_2:2819012-2819031 | Msa0749320:intron | 30.0% | |
AGAGGAAAATAATTTGATCC+CGG | - | chr5_2:2819121-2819140 | Msa0749320:intron | 30.0% | |
!!! | GTGTGTATTTTTTCTTTGCT+AGG | - | chr5_2:2819210-2819229 | Msa0749320:intron | 30.0% |
GATAATGTTCATTCCATTGT+TGG | - | chr5_2:2819343-2819362 | Msa0749320:intron | 30.0% | |
AAGGAAAAGTAGAGTGTGTA+GGG | + | chr5_2:2808793-2808812 | None:intergenic | 35.0% | |
AAAGGAAAAGTAGAGTGTGT+AGG | + | chr5_2:2808794-2808813 | None:intergenic | 35.0% | |
TACTCAAACTGCTACAGTAA+TGG | + | chr5_2:2809023-2809042 | None:intergenic | 35.0% | |
AACCAAACATAGACACTCTT+CGG | - | chr5_2:2809090-2809109 | Msa0749320:intron | 35.0% | |
! | ACGAGTATCATACGAGTTTT+GGG | + | chr5_2:2809139-2809158 | None:intergenic | 35.0% |
! | TACGAGTATCATACGAGTTT+TGG | + | chr5_2:2809140-2809159 | None:intergenic | 35.0% |
! | AGAGCCATTCTAAGTTCTAA+AGG | - | chr5_2:2809271-2809290 | Msa0749320:intron | 35.0% |
!! | TACGCCTTTAGAACTTAGAA+TGG | + | chr5_2:2809278-2809297 | None:intergenic | 35.0% |
!! | ATTCTAAGTTCTAAAGGCGT+AGG | - | chr5_2:2809277-2809296 | Msa0749320:intron | 35.0% |
ATCCAAAGACCAACTAATCT+GGG | + | chr5_2:2809420-2809439 | None:intergenic | 35.0% | |
!! | AGATTAGTTGGTCTTTGGAT+CGG | - | chr5_2:2809420-2809439 | Msa0749320:CDS | 35.0% |
! | CTATCTGATGTGTTTTCCAT+TGG | - | chr5_2:2809782-2809801 | Msa0749320:CDS | 35.0% |
ATAAAACGTGATGCATCCAA+TGG | + | chr5_2:2809801-2809820 | None:intergenic | 35.0% | |
! | CAGGGAAGTATAGTAAAAAC+TGG | - | chr5_2:2809857-2809876 | Msa0749320:intron | 35.0% |
!! | TATTATGGCTTTAGGTGTTG+TGG | - | chr5_2:2810038-2810057 | Msa0749320:intron | 35.0% |
CTTATAAAACCCGGCATATA+AGG | + | chr5_2:2810368-2810387 | None:intergenic | 35.0% | |
!! | CTTATATGCCGGGTTTTATA+AGG | - | chr5_2:2810366-2810385 | Msa0749320:intron | 35.0% |
!! | GGGTTTTATAAGGTTGAGTT+AGG | - | chr5_2:2810376-2810395 | Msa0749320:intron | 35.0% |
TAAAGCATAGTAGCACACAA+TGG | + | chr5_2:2810566-2810585 | None:intergenic | 35.0% | |
GGAAACAAGATTGACAGATT+AGG | - | chr5_2:2810985-2811004 | Msa0749320:CDS | 35.0% | |
TTAGTCCTAATGGAAGTCAT+TGG | - | chr5_2:2811400-2811419 | Msa0749320:CDS | 35.0% | |
! | TGGTTTAAATTGTGGGTTGT+CGG | - | chr5_2:2811420-2811439 | Msa0749320:CDS | 35.0% |
! | AGTCCAAAGTACTCGTAAAT+AGG | - | chr5_2:2811681-2811700 | Msa0749320:CDS | 35.0% |
! | GTCCAAAGTACTCGTAAATA+GGG | - | chr5_2:2811682-2811701 | Msa0749320:CDS | 35.0% |
TACCCTATTTACGAGTACTT+TGG | + | chr5_2:2811687-2811706 | None:intergenic | 35.0% | |
! | CAATCAAGAGGTTTTCTAAG+TGG | + | chr5_2:2811720-2811739 | None:intergenic | 35.0% |
ACAGAAAGAGTTGCATAACT+AGG | - | chr5_2:2811796-2811815 | Msa0749320:CDS | 35.0% | |
! | TTTGGGTGGAATTTCCTTTT+TGG | - | chr5_2:2811909-2811928 | Msa0749320:CDS | 35.0% |
GGCAAATTCTATCGTTTAAG+GGG | + | chr5_2:2812316-2812335 | None:intergenic | 35.0% | |
GGGCAAATTCTATCGTTTAA+GGG | + | chr5_2:2812317-2812336 | None:intergenic | 35.0% | |
TGGGCAAATTCTATCGTTTA+AGG | + | chr5_2:2812318-2812337 | None:intergenic | 35.0% | |
TAGAATTTGCCCAAAATAGC+GGG | - | chr5_2:2812325-2812344 | Msa0749320:intron | 35.0% | |
!!! | ATTTTGGTTTGGAATGGTAG+AGG | + | chr5_2:2812551-2812570 | None:intergenic | 35.0% |
!!! | GAGCTTTGTTGATTTTGGTT+TGG | + | chr5_2:2812562-2812581 | None:intergenic | 35.0% |
TACCTAAAGGAAGTGATTCA+AGG | - | chr5_2:2812630-2812649 | Msa0749320:CDS | 35.0% | |
ACCTAAAGGAAGTGATTCAA+GGG | - | chr5_2:2812631-2812650 | Msa0749320:CDS | 35.0% | |
TAGGAAAAGATCTAGGTTTG+TGG | - | chr5_2:2812671-2812690 | Msa0749320:CDS | 35.0% | |
TGGATTAAGATGGTGATTGA+TGG | - | chr5_2:2813200-2813219 | Msa0749320:intron | 35.0% | |
!! | GTGTTGATTAGATGAATGCT+AGG | - | chr5_2:2813263-2813282 | Msa0749320:intron | 35.0% |
ATACATAAGTCCGACTAACT+AGG | + | chr5_2:2813470-2813489 | None:intergenic | 35.0% | |
GTATGCTAAAAAACGGTAAG+TGG | + | chr5_2:2813676-2813695 | None:intergenic | 35.0% | |
TTACTGGTAGGTAACTATCT+TGG | - | chr5_2:2813697-2813716 | Msa0749320:intron | 35.0% | |
TACTGGTAGGTAACTATCTT+GGG | - | chr5_2:2813698-2813717 | Msa0749320:intron | 35.0% | |
TGGATCACAGTTTGAATCTA+GGG | - | chr5_2:2814047-2814066 | Msa0749320:intron | 35.0% | |
! | ACAGTTTGAATCTAGGGTTA+GGG | - | chr5_2:2814053-2814072 | Msa0749320:intron | 35.0% |
ATTGTACCCTTCACTTTCAA+CGG | - | chr5_2:2814083-2814102 | Msa0749320:intron | 35.0% | |
GCATATAACTCTGCAGATTT+AGG | + | chr5_2:2814338-2814357 | None:intergenic | 35.0% | |
CATAAATGACGTCAATTACC+AGG | + | chr5_2:2814672-2814691 | None:intergenic | 35.0% | |
AGTATACGATAAACAAGTGC+TGG | + | chr5_2:2814712-2814731 | None:intergenic | 35.0% | |
TGATTGATGAAATCTGCATC+AGG | + | chr5_2:2814761-2814780 | None:intergenic | 35.0% | |
GGACTAAAGAATGTGGAATA+CGG | - | chr5_2:2814813-2814832 | Msa0749320:intron | 35.0% | |
TGCATAAAATTACAGAGGGA+TGG | - | chr5_2:2814972-2814991 | Msa0749320:intron | 35.0% | |
GCATAAAATTACAGAGGGAT+GGG | - | chr5_2:2814973-2814992 | Msa0749320:intron | 35.0% | |
CATAAAATTACAGAGGGATG+GGG | - | chr5_2:2814974-2814993 | Msa0749320:intron | 35.0% | |
ATAAAATTACAGAGGGATGG+GGG | - | chr5_2:2814975-2814994 | Msa0749320:intron | 35.0% | |
TCGGTGATAATATTCCTGAT+TGG | - | chr5_2:2815054-2815073 | Msa0749320:intron | 35.0% | |
!!! | TGCATTTTTCAAGCATCTCT+CGG | - | chr5_2:2815128-2815147 | Msa0749320:intron | 35.0% |
!!! | TAGTTTTGTTTTACGTTGGC+AGG | - | chr5_2:2815281-2815300 | Msa0749320:intron | 35.0% |
CAAGATATTCTCACAACTGT+TGG | - | chr5_2:2815541-2815560 | Msa0749320:intron | 35.0% | |
TCAGAAATATCCATACTGAG+AGG | + | chr5_2:2815592-2815611 | None:intergenic | 35.0% | |
TTGGAATCAAAAGACGATAC+TGG | + | chr5_2:2815677-2815696 | None:intergenic | 35.0% | |
TATTGTGCCTTACGACAAAT+GGG | + | chr5_2:2815945-2815964 | None:intergenic | 35.0% | |
ATATTGTGCCTTACGACAAA+TGG | + | chr5_2:2815946-2815965 | None:intergenic | 35.0% | |
GAGTCAATGATCCAGAAATA+AGG | + | chr5_2:2816107-2816126 | None:intergenic | 35.0% | |
TTCAAAACAAAAAGGAGGAG+GGG | + | chr5_2:2816158-2816177 | None:intergenic | 35.0% | |
GTTCAAAACAAAAAGGAGGA+GGG | + | chr5_2:2816159-2816178 | None:intergenic | 35.0% | |
AGTTCAAAACAAAAAGGAGG+AGG | + | chr5_2:2816160-2816179 | None:intergenic | 35.0% | |
AAGAGGTTACATTCAACTGA+AGG | - | chr5_2:2816271-2816290 | Msa0749320:intron | 35.0% | |
!! | GTACATTAGCTGATTTTGCA+TGG | + | chr5_2:2816600-2816619 | None:intergenic | 35.0% |
! | TTATTGACTGCAACTACAAC+TGG | + | chr5_2:2816622-2816641 | None:intergenic | 35.0% |
GATCTTAAAGCACGATTTGA+TGG | - | chr5_2:2816811-2816830 | Msa0749320:intron | 35.0% | |
TTCACTATAGTAGTCACCAA+TGG | + | chr5_2:2816886-2816905 | None:intergenic | 35.0% | |
! | ATTGGTGACTACTATAGTGA+AGG | - | chr5_2:2816885-2816904 | Msa0749320:intron | 35.0% |
! | TGTCATTGTTGTTCATTCTG+AGG | - | chr5_2:2817065-2817084 | Msa0749320:intron | 35.0% |
! | CAGTATCATCTGAAGTAGTT+GGG | + | chr5_2:2817167-2817186 | None:intergenic | 35.0% |
! | TCAGTATCATCTGAAGTAGT+TGG | + | chr5_2:2817168-2817187 | None:intergenic | 35.0% |
AACTACTTCAGATGATACTG+AGG | - | chr5_2:2817167-2817186 | Msa0749320:intron | 35.0% | |
TAATAACCATCACATACCTG+AGG | + | chr5_2:2817288-2817307 | None:intergenic | 35.0% | |
AATGCACCAATACTTGACAA+AGG | + | chr5_2:2818081-2818100 | None:intergenic | 35.0% | |
TGTTGTATTGAAAAGCGAAG+TGG | - | chr5_2:2818192-2818211 | Msa0749320:intron | 35.0% | |
GTTGTATTGAAAAGCGAAGT+GGG | - | chr5_2:2818193-2818212 | Msa0749320:intron | 35.0% | |
CTAATGGCTCAGTTATTAAG+GGG | - | chr5_2:2818244-2818263 | Msa0749320:intron | 35.0% | |
CCAATAAGTGGTAAATCACA+CGG | + | chr5_2:2818423-2818442 | None:intergenic | 35.0% | |
GGCCTTCTCTATTATCAAAT+TGG | + | chr5_2:2818455-2818474 | None:intergenic | 35.0% | |
!! | TTGTTGAAGGTTTTGTGAAC+AGG | - | chr5_2:2818584-2818603 | Msa0749320:intron | 35.0% |
! | TCTTTCAGCACACATTTTTG+TGG | - | chr5_2:2818856-2818875 | Msa0749320:intron | 35.0% |
!! | GTAGTAGCTTCCTTTTGAAA+TGG | + | chr5_2:2819079-2819098 | None:intergenic | 35.0% |
TCATCCTAGAATATCTGAGT+GGG | - | chr5_2:2819263-2819282 | Msa0749320:intron | 35.0% | |
ATAACCCACTCAGATATTCT+AGG | + | chr5_2:2819270-2819289 | None:intergenic | 35.0% | |
!! | GAATATCTGAGTGGGTTATT+TGG | - | chr5_2:2819271-2819290 | Msa0749320:intron | 35.0% |
CATTGCAATGAAAATGCACA+TGG | - | chr5_2:2819400-2819419 | Msa0749320:five_prime_UTR | 35.0% | |
ACACACTTCACAACTTCAAC+AGG | - | chr5_2:2808855-2808874 | Msa0749320:three_prime_UTR | 40.0% | |
!! | ATCCGAAGAGTGTCTATGTT+TGG | + | chr5_2:2809095-2809114 | None:intergenic | 40.0% |
ACATAGACACTCTTCGGATT+AGG | - | chr5_2:2809096-2809115 | Msa0749320:intron | 40.0% | |
GAGGATTCAAACCTTGAGAA+GGG | + | chr5_2:2809322-2809341 | None:intergenic | 40.0% | |
TTCTGTGGGATAGTCCATAT+TGG | - | chr5_2:2809353-2809372 | Msa0749320:three_prime_UTR | 40.0% | |
! | GAGCCCATTTAAAGCCAATA+TGG | + | chr5_2:2809370-2809389 | None:intergenic | 40.0% |
!! | ATCCCAGATTAGTTGGTCTT+TGG | - | chr5_2:2809415-2809434 | Msa0749320:CDS | 40.0% |
GATCCAAAGACCAACTAATC+TGG | + | chr5_2:2809421-2809440 | None:intergenic | 40.0% | |
GCAACACAAATGCTGCAATT+TGG | + | chr5_2:2810232-2810251 | None:intergenic | 40.0% | |
! | TCCATATCTCTAGGGAATGT+GGG | + | chr5_2:2810311-2810330 | None:intergenic | 40.0% |
CTACACAGTCCATATCTCTA+GGG | + | chr5_2:2810319-2810338 | None:intergenic | 40.0% | |
ACTACACAGTCCATATCTCT+AGG | + | chr5_2:2810320-2810339 | None:intergenic | 40.0% | |
GTTGAGCTCTATGGTTACAT+AGG | - | chr5_2:2810520-2810539 | Msa0749320:intron | 40.0% | |
TTGGATGAGATGCAGAATTC+TGG | - | chr5_2:2811090-2811109 | Msa0749320:CDS | 40.0% | |
TGGATGAGATGCAGAATTCT+GGG | - | chr5_2:2811091-2811110 | Msa0749320:CDS | 40.0% | |
TTGGGCAACAATACGTATCA+AGG | - | chr5_2:2812013-2812032 | Msa0749320:intron | 40.0% | |
!!! | CGTGTGAGCTTTGTTGATTT+TGG | + | chr5_2:2812567-2812586 | None:intergenic | 40.0% |
CAAGAGCCAAAGAGAACATT+AGG | - | chr5_2:2812725-2812744 | Msa0749320:CDS | 40.0% | |
TCTGCTCCTAATGTTCTCTT+TGG | + | chr5_2:2812734-2812753 | None:intergenic | 40.0% | |
AGAACATTAGGAGCAGATGA+AGG | - | chr5_2:2812737-2812756 | Msa0749320:CDS | 40.0% | |
!! | TCTCATGCTTGTCACTTTGA+AGG | - | chr5_2:2812915-2812934 | Msa0749320:intron | 40.0% |
! | TGCAGAGTAAGTAGAAGCAT+AGG | - | chr5_2:2813438-2813457 | Msa0749320:CDS | 40.0% |
TAGATGTGTAGTACGCATCT+AGG | - | chr5_2:2813566-2813585 | Msa0749320:CDS | 40.0% | |
TAGCCATCCAATGTGTTAGT+CGG | - | chr5_2:2814021-2814040 | Msa0749320:intron | 40.0% | |
CTGGATCACAGTTTGAATCT+AGG | - | chr5_2:2814046-2814065 | Msa0749320:intron | 40.0% | |
! | CACAGTTTGAATCTAGGGTT+AGG | - | chr5_2:2814052-2814071 | Msa0749320:intron | 40.0% |
ACAAAGCCGTTGAAAGTGAA+GGG | + | chr5_2:2814092-2814111 | None:intergenic | 40.0% | |
TACAAAGCCGTTGAAAGTGA+AGG | + | chr5_2:2814093-2814112 | None:intergenic | 40.0% | |
TTTGCTGAAGCTTGGAAAGA+AGG | - | chr5_2:2814372-2814391 | Msa0749320:intron | 40.0% | |
AAATAAAACCCCCTGCAACA+TGG | + | chr5_2:2814463-2814482 | None:intergenic | 40.0% | |
TATGAACTTTACCAGGGCTT+TGG | - | chr5_2:2814560-2814579 | Msa0749320:intron | 40.0% | |
CAATCACTCATGTATAGGTG+TGG | - | chr5_2:2814775-2814794 | Msa0749320:intron | 40.0% | |
AGCATCATTTGTCCTATGCA+TGG | - | chr5_2:2814910-2814929 | Msa0749320:intron | 40.0% | |
!! | GTACTGCTTTGTGAGTTGAT+AGG | - | chr5_2:2815022-2815041 | Msa0749320:intron | 40.0% |
GAGAGATGCTTGAAAAATGC+AGG | + | chr5_2:2815129-2815148 | None:intergenic | 40.0% | |
TCACATACTTCTCCCTCTTT+GGG | + | chr5_2:2815366-2815385 | None:intergenic | 40.0% | |
! | AGGGAGAAGTATGTGAGAAA+AGG | - | chr5_2:2815370-2815389 | Msa0749320:intron | 40.0% |
TGGTTGCAGTGACTTTACAA+GGG | + | chr5_2:2815432-2815451 | None:intergenic | 40.0% | |
TTGGTTGCAGTGACTTTACA+AGG | + | chr5_2:2815433-2815452 | None:intergenic | 40.0% | |
!! | TATTTCTGAGCTTGCTGCAA+TGG | - | chr5_2:2815603-2815622 | Msa0749320:intron | 40.0% |
TTGTCTCATTCAGCTTCACT+TGG | - | chr5_2:2815774-2815793 | Msa0749320:intron | 40.0% | |
ATTGTGCCTTACGACAAATG+GGG | + | chr5_2:2815944-2815963 | None:intergenic | 40.0% | |
TCGTAAGGCACAATATGCAT+AGG | - | chr5_2:2815950-2815969 | Msa0749320:intron | 40.0% | |
TCAAAACAAAAAGGAGGAGG+GGG | + | chr5_2:2816157-2816176 | None:intergenic | 40.0% | |
TCATTTCTGTTGCAGGAAGT+TGG | - | chr5_2:2816238-2816257 | Msa0749320:intron | 40.0% | |
AAGTTGGCGTCAATGTTAAG+AGG | - | chr5_2:2816254-2816273 | Msa0749320:intron | 40.0% | |
!!! | ACTTTTTCAGGATTTGCACC+TGG | + | chr5_2:2816655-2816674 | None:intergenic | 40.0% |
! | AAAACTACAGCTTGCTTCAG+AGG | - | chr5_2:2816675-2816694 | Msa0749320:intron | 40.0% |
! | AAACTACAGCTTGCTTCAGA+GGG | - | chr5_2:2816676-2816695 | Msa0749320:intron | 40.0% |
GTTGAAGCAAGACTTGACAA+AGG | - | chr5_2:2816853-2816872 | Msa0749320:intron | 40.0% | |
AAGCAAGACTTGACAAAGGA+CGG | - | chr5_2:2816857-2816876 | Msa0749320:intron | 40.0% | |
AACAACAATGACATCGTCAC+CGG | + | chr5_2:2817058-2817077 | None:intergenic | 40.0% | |
! | TTGTTGTTCATTCTGAGGAG+CGG | - | chr5_2:2817070-2817089 | Msa0749320:intron | 40.0% |
!! | CTAGAATGCTTAGTTCTGGT+AGG | - | chr5_2:2817094-2817113 | Msa0749320:intron | 40.0% |
AATTTGAAGAGGACAGGCTT+AGG | - | chr5_2:2817124-2817143 | Msa0749320:intron | 40.0% | |
ATTTGAAGAGGACAGGCTTA+GGG | - | chr5_2:2817125-2817144 | Msa0749320:intron | 40.0% | |
TACTTCAGATGATACTGAGG+AGG | - | chr5_2:2817170-2817189 | Msa0749320:intron | 40.0% | |
GACAACTTTGAATAGTCCTC+AGG | - | chr5_2:2817269-2817288 | Msa0749320:intron | 40.0% | |
AATAGTCCTCAGGTATGTGA+TGG | - | chr5_2:2817279-2817298 | Msa0749320:intron | 40.0% | |
TCTGTGAATGTTGTCCATGT+TGG | - | chr5_2:2817692-2817711 | Msa0749320:intron | 40.0% | |
ATCTGTGTGAAATGGTCTAC+TGG | + | chr5_2:2818012-2818031 | None:intergenic | 40.0% | |
TGAGTGCCTTTGTCAAGTAT+TGG | - | chr5_2:2818072-2818091 | Msa0749320:intron | 40.0% | |
CGGAGGGAGTAATAAAATTC+AGG | - | chr5_2:2818267-2818286 | Msa0749320:intron | 40.0% | |
!! | GATATCCGTTTGGTTTGGTT+TGG | - | chr5_2:2818378-2818397 | Msa0749320:intron | 40.0% |
CCAAACCAAACCAAACCAAA+CGG | + | chr5_2:2818386-2818405 | None:intergenic | 40.0% | |
!! | TTGGTTTGGTTTGGTTTGGT+AGG | - | chr5_2:2818387-2818406 | Msa0749320:intron | 40.0% |
CCGTGTGATTTACCACTTAT+TGG | - | chr5_2:2818420-2818439 | Msa0749320:intron | 40.0% | |
AGTGAAAGGGAGCAAATCTA+AGG | - | chr5_2:2818531-2818550 | Msa0749320:intron | 40.0% | |
GTGAAAGGGAGCAAATCTAA+GGG | - | chr5_2:2818532-2818551 | Msa0749320:intron | 40.0% | |
!! | CAACCAGCTATTTTCACATC+AGG | + | chr5_2:2818559-2818578 | None:intergenic | 40.0% |
AGTGGTGAAATGGTGTTTGA+AGG | - | chr5_2:2818631-2818650 | Msa0749320:intron | 40.0% | |
ACCTTGTTCGTCTCTTAAGA+GGG | - | chr5_2:2818654-2818673 | Msa0749320:intron | 40.0% | |
GATGTGGATTCTGTGAAGAA+AGG | - | chr5_2:2818685-2818704 | Msa0749320:intron | 40.0% | |
GTGAAGAAAGGAAATGAGTG+TGG | - | chr5_2:2818697-2818716 | Msa0749320:intron | 40.0% | |
!!! | AACAGTTATTTTGGCAGCTC+AGG | + | chr5_2:2818892-2818911 | None:intergenic | 40.0% |
AATAACTACCCAGAAACTGC+CGG | + | chr5_2:2819143-2819162 | None:intergenic | 40.0% | |
GTCATCCTAGAATATCTGAG+TGG | - | chr5_2:2819262-2819281 | Msa0749320:intron | 40.0% | |
!! | TCTGAGTGGGTTATTTGGAA+AGG | - | chr5_2:2819276-2819295 | Msa0749320:intron | 40.0% |
!! | CTGAGTGGGTTATTTGGAAA+GGG | - | chr5_2:2819277-2819296 | Msa0749320:intron | 40.0% |
ATCGTAATCAGGACCAACAA+TGG | + | chr5_2:2819359-2819378 | None:intergenic | 40.0% | |
TCCTGATTACGATCACTTCA+AGG | - | chr5_2:2819366-2819385 | Msa0749320:five_prime_UTR | 40.0% | |
CAATGAAAATGCACATGGAG+TGG | - | chr5_2:2819405-2819424 | Msa0749320:five_prime_UTR | 40.0% | |
GGATGCAGGAAGGAAAAGAA+AGG | + | chr5_2:2808812-2808831 | None:intergenic | 45.0% | |
GAAGAGAAAAGGATGCAGGA+AGG | + | chr5_2:2808822-2808841 | None:intergenic | 45.0% | |
! | AGGATGGTCTGTATTTTCCG+TGG | - | chr5_2:2808992-2809011 | Msa0749320:intron | 45.0% |
!!! | CGAGTTTTGGGACACTAAAC+CGG | + | chr5_2:2809127-2809146 | None:intergenic | 45.0% |
!! | AAGTTCTAAAGGCGTAGGTG+TGG | - | chr5_2:2809282-2809301 | Msa0749320:intron | 45.0% |
!! | AGTTCTAAAGGCGTAGGTGT+GGG | - | chr5_2:2809283-2809302 | Msa0749320:intron | 45.0% |
GGAGGATTCAAACCTTGAGA+AGG | + | chr5_2:2809323-2809342 | None:intergenic | 45.0% | |
ATCCCACAGAAATTCGCACT+GGG | + | chr5_2:2809344-2809363 | None:intergenic | 45.0% | |
TATCCCACAGAAATTCGCAC+TGG | + | chr5_2:2809345-2809364 | None:intergenic | 45.0% | |
ATAGCGGCGCTATAGTATAG+AGG | + | chr5_2:2809955-2809974 | None:intergenic | 45.0% | |
!! | TTAGGTGTTGTGGTACTGGT+TGG | - | chr5_2:2810048-2810067 | Msa0749320:intron | 45.0% |
!! | TAGGTGTTGTGGTACTGGTT+GGG | - | chr5_2:2810049-2810068 | Msa0749320:intron | 45.0% |
ATGCTGCAATTTGGCAGCTA+GGG | + | chr5_2:2810223-2810242 | None:intergenic | 45.0% | |
AATGCTGCAATTTGGCAGCT+AGG | + | chr5_2:2810224-2810243 | None:intergenic | 45.0% | |
TTTCACACCCAACACAACGA+AGG | + | chr5_2:2810275-2810294 | None:intergenic | 45.0% | |
TTCGTTGTGTTGGGTGTGAA+AGG | - | chr5_2:2810274-2810293 | Msa0749320:intron | 45.0% | |
TCGTTGTGTTGGGTGTGAAA+GGG | - | chr5_2:2810275-2810294 | Msa0749320:intron | 45.0% | |
TCCCACATTCCCTAGAGATA+TGG | - | chr5_2:2810307-2810326 | Msa0749320:intron | 45.0% | |
! | GTCCATATCTCTAGGGAATG+TGG | + | chr5_2:2810312-2810331 | None:intergenic | 45.0% |
AAACCCGGCATATAAGGTGA+GGG | + | chr5_2:2810362-2810381 | None:intergenic | 45.0% | |
AAAACCCGGCATATAAGGTG+AGG | + | chr5_2:2810363-2810382 | None:intergenic | 45.0% | |
CTTGCACTAGTTGAGCTCTA+TGG | - | chr5_2:2810511-2810530 | Msa0749320:intron | 45.0% | |
GGATGAGATGCAGAATTCTG+GGG | - | chr5_2:2811092-2811111 | Msa0749320:CDS | 45.0% | |
TGCAGCAAGAGAAAGAGGTA+GGG | + | chr5_2:2811195-2811214 | None:intergenic | 45.0% | |
ATGCAGCAAGAGAAAGAGGT+AGG | + | chr5_2:2811196-2811215 | None:intergenic | 45.0% | |
GAAGATGCAGCAAGAGAAAG+AGG | + | chr5_2:2811200-2811219 | None:intergenic | 45.0% | |
CACACACGACCCTAATTGTA+AGG | + | chr5_2:2811480-2811499 | None:intergenic | 45.0% | |
CGAACGACGGTAGATGTAAT+AGG | - | chr5_2:2811578-2811597 | Msa0749320:CDS | 45.0% | |
TAAAGTAACCCGTGGCACAA+GGG | + | chr5_2:2811637-2811656 | None:intergenic | 45.0% | |
AGAGAGAAGAGAGGAAGAAG+AGG | + | chr5_2:2812502-2812521 | None:intergenic | 45.0% | |
ATTCTTGCGAGAGAGAAGAG+AGG | + | chr5_2:2812511-2812530 | None:intergenic | 45.0% | |
GTAAGGCAAGGGATACCTAA+AGG | - | chr5_2:2812617-2812636 | Msa0749320:CDS | 45.0% | |
GCCCTTGAATCACTTCCTTT+AGG | + | chr5_2:2812635-2812654 | None:intergenic | 45.0% | |
GGCTGTGTACGCAAAAAGAT+AGG | - | chr5_2:2812652-2812671 | Msa0749320:CDS | 45.0% | |
GGGAACTCACCTCTAATTCT+AGG | + | chr5_2:2812794-2812813 | None:intergenic | 45.0% | |
ATCTTGGGTATACCCACACT+CGG | - | chr5_2:2813713-2813732 | Msa0749320:intron | 45.0% | |
ACCACAATCATCCATGTTGC+AGG | - | chr5_2:2814449-2814468 | Msa0749320:intron | 45.0% | |
CCACAATCATCCATGTTGCA+GGG | - | chr5_2:2814450-2814469 | Msa0749320:intron | 45.0% | |
CACAATCATCCATGTTGCAG+GGG | - | chr5_2:2814451-2814470 | Msa0749320:intron | 45.0% | |
ACAATCATCCATGTTGCAGG+GGG | - | chr5_2:2814452-2814471 | Msa0749320:intron | 45.0% | |
CTTTGGCTACAACACCATGT+AGG | - | chr5_2:2814577-2814596 | Msa0749320:intron | 45.0% | |
TACAACACCATGTAGGCATG+TGG | - | chr5_2:2814584-2814603 | Msa0749320:intron | 45.0% | |
! | AGTAGCGGGACTAAAGAATG+TGG | - | chr5_2:2814806-2814825 | Msa0749320:intron | 45.0% |
TTGTCCTATGCATGGTGAGT+AGG | - | chr5_2:2814918-2814937 | Msa0749320:intron | 45.0% | |
TGTCCTATGCATGGTGAGTA+GGG | - | chr5_2:2814919-2814938 | Msa0749320:intron | 45.0% | |
TCCTGATTGGTAGATTGGGT+TGG | - | chr5_2:2815067-2815086 | Msa0749320:intron | 45.0% | |
CCTGATTGGTAGATTGGGTT+GGG | - | chr5_2:2815068-2815087 | Msa0749320:intron | 45.0% | |
TCAAGAAGTGATGCAGCGTA+TGG | - | chr5_2:2815331-2815350 | Msa0749320:intron | 45.0% | |
ACATACTTCTCCCTCTTTGG+GGG | + | chr5_2:2815364-2815383 | None:intergenic | 45.0% | |
CACATACTTCTCCCTCTTTG+GGG | + | chr5_2:2815365-2815384 | None:intergenic | 45.0% | |
CTCACATACTTCTCCCTCTT+TGG | + | chr5_2:2815367-2815386 | None:intergenic | 45.0% | |
ACGCTTTGCCAGTTCAACAA+GGG | + | chr5_2:2815497-2815516 | None:intergenic | 45.0% | |
AACGCTTTGCCAGTTCAACA+AGG | + | chr5_2:2815498-2815517 | None:intergenic | 45.0% | |
AGAGTTTGAGCCTCTCAGTA+TGG | - | chr5_2:2815579-2815598 | Msa0749320:intron | 45.0% | |
CAGCTTCACTTGGAGCATAT+AGG | - | chr5_2:2815784-2815803 | Msa0749320:intron | 45.0% | |
!! | GGCTGCTAGCAATGTTTTGA+TGG | - | chr5_2:2815850-2815869 | Msa0749320:intron | 45.0% |
TAGTACTAGGCCTAGAGTCT+TGG | - | chr5_2:2815999-2816018 | Msa0749320:intron | 45.0% | |
AACCTACCTACCAAGACTCT+AGG | + | chr5_2:2816012-2816031 | None:intergenic | 45.0% | |
AGAGTCTTGGTAGGTAGGTT+TGG | - | chr5_2:2816012-2816031 | Msa0749320:intron | 45.0% | |
GAGTCTTGGTAGGTAGGTTT+GGG | - | chr5_2:2816013-2816032 | Msa0749320:intron | 45.0% | |
AAAACAAAAAGGAGGAGGGG+GGG | + | chr5_2:2816155-2816174 | None:intergenic | 45.0% | |
CAAAACAAAAAGGAGGAGGG+GGG | + | chr5_2:2816156-2816175 | None:intergenic | 45.0% | |
TCCTCCAGTTGTAACAGTGA+TGG | - | chr5_2:2816312-2816331 | Msa0749320:intron | 45.0% | |
CCTCCAGTTGTAACAGTGAT+GGG | - | chr5_2:2816313-2816332 | Msa0749320:intron | 45.0% | |
TGACCCATCACTGTTACAAC+TGG | + | chr5_2:2816319-2816338 | None:intergenic | 45.0% | |
!! | GTGATGGGTCATGTTGATCA+CGG | - | chr5_2:2816328-2816347 | Msa0749320:intron | 45.0% |
! | TTGACGCAAGGCATCAAGAA+GGG | + | chr5_2:2816362-2816381 | None:intergenic | 45.0% |
! | TTTGACGCAAGGCATCAAGA+AGG | + | chr5_2:2816363-2816382 | None:intergenic | 45.0% |
ATCACATTTCTCGACACTCC+TGG | - | chr5_2:2816463-2816482 | Msa0749320:intron | 45.0% | |
CTAGTTGTTGCTGCAGATGA+CGG | - | chr5_2:2816544-2816563 | Msa0749320:intron | 45.0% | |
GACACAGCTTCAAGTGTTTG+GGG | + | chr5_2:2816577-2816596 | None:intergenic | 45.0% | |
GGACACAGCTTCAAGTGTTT+GGG | + | chr5_2:2816578-2816597 | None:intergenic | 45.0% | |
GTTTCCGCGCTTAAAAAGAC+TGG | - | chr5_2:2816742-2816761 | Msa0749320:intron | 45.0% | |
!! | CAGTCCAGTCTTTTTAAGCG+CGG | + | chr5_2:2816749-2816768 | None:intergenic | 45.0% |
GAAGGAGTAAAGCTTCCTCT+AGG | + | chr5_2:2816777-2816796 | None:intergenic | 45.0% | |
AGAGGAAGCTTTACTCCTTC+AGG | - | chr5_2:2816777-2816796 | Msa0749320:intron | 45.0% | |
ACTCCTTCAGGCTGATATGA+TGG | - | chr5_2:2816789-2816808 | Msa0749320:intron | 45.0% | |
GATCCATCATATCAGCCTGA+AGG | + | chr5_2:2816795-2816814 | None:intergenic | 45.0% | |
TCAACCACATATGCTTGAGC+AGG | + | chr5_2:2816838-2816857 | None:intergenic | 45.0% | |
AGCAAGACTTGACAAAGGAC+GGG | - | chr5_2:2816858-2816877 | Msa0749320:intron | 45.0% | |
GTGACTACTATAGTGAAGGC+AGG | - | chr5_2:2816889-2816908 | Msa0749320:intron | 45.0% | |
! | AAGGCAGGAACTCTAGTTTG+TGG | - | chr5_2:2816904-2816923 | Msa0749320:intron | 45.0% |
! | TCTAGTTTGTGGACAGCATG+TGG | - | chr5_2:2816915-2816934 | Msa0749320:intron | 45.0% |
CTCGCAGTGGGGAAAAATAA+GGG | - | chr5_2:2816945-2816964 | Msa0749320:intron | 45.0% | |
AGGGCTATTAAAGATGCAGC+AGG | - | chr5_2:2816964-2816983 | Msa0749320:intron | 45.0% | |
GGGCTATTAAAGATGCAGCA+GGG | - | chr5_2:2816965-2816984 | Msa0749320:intron | 45.0% | |
CTATTAAAGATGCAGCAGGG+AGG | - | chr5_2:2816968-2816987 | Msa0749320:intron | 45.0% | |
CAATGCCTGTGGAGATTGAA+GGG | - | chr5_2:2817013-2817032 | Msa0749320:intron | 45.0% | |
! | TGTTGTTCATTCTGAGGAGC+GGG | - | chr5_2:2817071-2817090 | Msa0749320:intron | 45.0% |
TTTGAAGAGGACAGGCTTAG+GGG | - | chr5_2:2817126-2817145 | Msa0749320:intron | 45.0% | |
ATACTGAGGAGGTTCCAAAG+AGG | - | chr5_2:2817181-2817200 | Msa0749320:intron | 45.0% | |
TACTGAGGAGGTTCCAAAGA+GGG | - | chr5_2:2817182-2817201 | Msa0749320:intron | 45.0% | |
GGTTCCAAAGAGGGTTGAAA+TGG | - | chr5_2:2817191-2817210 | Msa0749320:intron | 45.0% | |
! | ACTGCCATTTCAACCCTCTT+TGG | + | chr5_2:2817198-2817217 | None:intergenic | 45.0% |
ACAAAGAACAAGGACGTGGA+AGG | - | chr5_2:2817361-2817380 | Msa0749320:intron | 45.0% | |
AATGTTGTCCATGTTGGCGT+GGG | - | chr5_2:2817698-2817717 | Msa0749320:intron | 45.0% | |
TCCACGTCGGATTGAGAAAT+AGG | + | chr5_2:2817725-2817744 | None:intergenic | 45.0% | |
GCTTGGGTAAGAGAAATAGG+TGG | + | chr5_2:2817797-2817816 | None:intergenic | 45.0% | |
GCTGCTTGGGTAAGAGAAAT+AGG | + | chr5_2:2817800-2817819 | None:intergenic | 45.0% | |
AGCAACTCGTGCTAGTATCA+AGG | - | chr5_2:2817817-2817836 | Msa0749320:intron | 45.0% | |
!! | TCTACTGGCTCGGTTAAACT+GGG | + | chr5_2:2817997-2818016 | None:intergenic | 45.0% |
! | TGTGAAATGGTCTACTGGCT+CGG | + | chr5_2:2818007-2818026 | None:intergenic | 45.0% |
ATGGCTCAGTTATTAAGGGG+CGG | - | chr5_2:2818247-2818266 | Msa0749320:intron | 45.0% | |
!! | CCGTTTGGTTTGGTTTGGTT+TGG | - | chr5_2:2818383-2818402 | Msa0749320:intron | 45.0% |
TGGCTACGTCTTCCAATAAG+TGG | + | chr5_2:2818435-2818454 | None:intergenic | 45.0% | |
! | TTGATAATAGAGAAGGCCCC+AGG | - | chr5_2:2818457-2818476 | Msa0749320:intron | 45.0% |
GGACCTGATGTGAAAATAGC+TGG | - | chr5_2:2818553-2818572 | Msa0749320:intron | 45.0% | |
GCTGGTTGCAAAGTTGTTGA+AGG | - | chr5_2:2818571-2818590 | Msa0749320:intron | 45.0% | |
! | GCTTCTAAGGAGTGGTGAAA+TGG | - | chr5_2:2818621-2818640 | Msa0749320:intron | 45.0% |
GACCTTGTTCGTCTCTTAAG+AGG | - | chr5_2:2818653-2818672 | Msa0749320:intron | 45.0% | |
TCCCTCTTAAGAGACGAACA+AGG | + | chr5_2:2818658-2818677 | None:intergenic | 45.0% | |
!! | ATAGAGTGCTGACGAAAAGC+TGG | - | chr5_2:2818829-2818848 | Msa0749320:intron | 45.0% |
TCCATACTTTGCTAGAGCTG+CGG | + | chr5_2:2819039-2819058 | None:intergenic | 45.0% | |
AATTTGATCCCGGCAGTTTC+TGG | - | chr5_2:2819131-2819150 | Msa0749320:intron | 45.0% | |
ATTTGATCCCGGCAGTTTCT+GGG | - | chr5_2:2819132-2819151 | Msa0749320:intron | 45.0% | |
ATAACTACCCAGAAACTGCC+GGG | + | chr5_2:2819142-2819161 | None:intergenic | 45.0% | |
TGGGTTATTTGGAAAGGGAG+AGG | - | chr5_2:2819282-2819301 | Msa0749320:intron | 45.0% | |
GCCTTGAAGTGATCGTAATC+AGG | + | chr5_2:2819370-2819389 | None:intergenic | 45.0% | |
!!! | TTTTTTATTTTTTAGAATTT+GGG | + | chr5_2:2810407-2810426 | None:intergenic | 5.0% |
!!! | ATTTTTTATTTTTTAGAATT+TGG | + | chr5_2:2810408-2810427 | None:intergenic | 5.0% |
TCGCGAAGAGAAAAGGATGC+AGG | + | chr5_2:2808826-2808845 | None:intergenic | 50.0% | |
! | TGCATCCTTTTCTCTTCGCG+AGG | - | chr5_2:2808825-2808844 | Msa0749320:three_prime_UTR | 50.0% |
! | CTCTTCGGATTAGGCATGTC+CGG | - | chr5_2:2809105-2809124 | Msa0749320:intron | 50.0% |
CTTGAGAAGGGAACACTCCA+GGG | + | chr5_2:2809310-2809329 | None:intergenic | 50.0% | |
CTCCCAGTGCGAATTTCTGT+GGG | - | chr5_2:2809339-2809358 | Msa0749320:intron | 50.0% | |
AATTCCACCATCCACCAGTG+GGG | + | chr5_2:2809392-2809411 | None:intergenic | 50.0% | |
CAATTCCACCATCCACCAGT+GGG | + | chr5_2:2809393-2809412 | None:intergenic | 50.0% | |
TCAATTCCACCATCCACCAG+TGG | + | chr5_2:2809394-2809413 | None:intergenic | 50.0% | |
!! | GGCTTTAGGTGTTGTGGTAC+TGG | - | chr5_2:2810044-2810063 | Msa0749320:intron | 50.0% |
TGCTGCAATTTGGCAGCTAG+GGG | + | chr5_2:2810222-2810241 | None:intergenic | 50.0% | |
!! | GGTGTCGGTGGTTGGAATAA+AGG | + | chr5_2:2810254-2810273 | None:intergenic | 50.0% |
ACCGACACCTTCGTTGTGTT+GGG | - | chr5_2:2810265-2810284 | Msa0749320:intron | 50.0% | |
! | ACCCAACACAACGAAGGTGT+CGG | + | chr5_2:2810269-2810288 | None:intergenic | 50.0% |
TTGTGTTGGGTGTGAAAGGG+TGG | - | chr5_2:2810278-2810297 | Msa0749320:intron | 50.0% | |
GCAACCCTCACCTTATATGC+CGG | - | chr5_2:2810355-2810374 | Msa0749320:intron | 50.0% | |
CAACCCTCACCTTATATGCC+GGG | - | chr5_2:2810356-2810375 | Msa0749320:intron | 50.0% | |
CTAAAGTAACCCGTGGCACA+AGG | + | chr5_2:2811638-2811657 | None:intergenic | 50.0% | |
! | TTGTCCTGCGTTTTGCTCAG+AGG | - | chr5_2:2812359-2812378 | Msa0749320:intron | 50.0% |
TCTTGGGTATACCCACACTC+GGG | - | chr5_2:2813714-2813733 | Msa0749320:intron | 50.0% | |
TCGTAACTTCTCCCGAGTGT+GGG | + | chr5_2:2813728-2813747 | None:intergenic | 50.0% | |
TTCGTAACTTCTCCCGAGTG+TGG | + | chr5_2:2813729-2813748 | None:intergenic | 50.0% | |
TCGCAGTGAGTTCCCAAAGA+GGG | + | chr5_2:2813922-2813941 | None:intergenic | 50.0% | |
ATCGCAGTGAGTTCCCAAAG+AGG | + | chr5_2:2813923-2813942 | None:intergenic | 50.0% | |
GCTCCGACTAACACATTGGA+TGG | + | chr5_2:2814027-2814046 | None:intergenic | 50.0% | |
TCCAATGTGTTAGTCGGAGC+TGG | - | chr5_2:2814027-2814046 | Msa0749320:intron | 50.0% | |
TCCAGCTCCGACTAACACAT+TGG | + | chr5_2:2814031-2814050 | None:intergenic | 50.0% | |
CCCTGCAACATGGATGATTG+TGG | + | chr5_2:2814453-2814472 | None:intergenic | 50.0% | |
ACACCATGTAGGCATGTGGT+AGG | - | chr5_2:2814588-2814607 | Msa0749320:intron | 50.0% | |
CACCATGTAGGCATGTGGTA+GGG | - | chr5_2:2814589-2814608 | Msa0749320:intron | 50.0% | |
CACTCATGTATAGGTGTGGC+TGG | - | chr5_2:2814779-2814798 | Msa0749320:intron | 50.0% | |
!!! | GGTGTGGCTGGTTTTAGTAG+CGG | - | chr5_2:2814791-2814810 | Msa0749320:intron | 50.0% |
!!! | GTGTGGCTGGTTTTAGTAGC+GGG | - | chr5_2:2814792-2814811 | Msa0749320:intron | 50.0% |
TAGCCCTACTCACCATGCAT+AGG | + | chr5_2:2814925-2814944 | None:intergenic | 50.0% | |
TATGCATGGTGAGTAGGGCT+AGG | - | chr5_2:2814924-2814943 | Msa0749320:intron | 50.0% | |
CCCAACCCAATCTACCAATC+AGG | + | chr5_2:2815071-2815090 | None:intergenic | 50.0% | |
TCCATGCTAGCTCACAAGTC+TGG | - | chr5_2:2815308-2815327 | Msa0749320:intron | 50.0% | |
ACCAGACTTGTGAGCTAGCA+TGG | + | chr5_2:2815312-2815331 | None:intergenic | 50.0% | |
! | ATGGTTTGAAGCCCCCAAAG+AGG | - | chr5_2:2815350-2815369 | Msa0749320:intron | 50.0% |
! | TGGTTTGAAGCCCCCAAAGA+GGG | - | chr5_2:2815351-2815370 | Msa0749320:intron | 50.0% |
GTGACTTTACAAGGGACGTG+TGG | + | chr5_2:2815424-2815443 | None:intergenic | 50.0% | |
AGGCATGACCCTTGTTGAAC+TGG | - | chr5_2:2815486-2815505 | Msa0749320:intron | 50.0% | |
! | GTTGAACTGGCAAAGCGTTC+TGG | - | chr5_2:2815499-2815518 | Msa0749320:intron | 50.0% |
GCATCTCCCCATTTGTCGTA+AGG | - | chr5_2:2815935-2815954 | Msa0749320:intron | 50.0% | |
ACTAGGCCTAGAGTCTTGGT+AGG | - | chr5_2:2816003-2816022 | Msa0749320:intron | 50.0% | |
ACTGTTACAACTGGAGGACG+TGG | + | chr5_2:2816310-2816329 | None:intergenic | 50.0% | |
CCCATCACTGTTACAACTGG+AGG | + | chr5_2:2816316-2816335 | None:intergenic | 50.0% | |
AGTAATGCCACCAGCTTCCT+TGG | + | chr5_2:2816398-2816417 | None:intergenic | 50.0% | |
GGTGGCATTACTCAGCATCT+AGG | - | chr5_2:2816406-2816425 | Msa0749320:intron | 50.0% | |
TCAGCATCTAGGTGCCTTTG+TGG | - | chr5_2:2816417-2816436 | Msa0749320:intron | 50.0% | |
CATCTAGGTGCCTTTGTGGT+GGG | - | chr5_2:2816421-2816440 | Msa0749320:intron | 50.0% | |
TGATGACATGCCCACCACAA+AGG | + | chr5_2:2816434-2816453 | None:intergenic | 50.0% | |
!! | TTTGTGGTGGGCATGTCATC+AGG | - | chr5_2:2816433-2816452 | Msa0749320:intron | 50.0% |
TTTAGTGCCATGCGAGCAAG+AGG | - | chr5_2:2816496-2816515 | Msa0749320:intron | 50.0% | |
GGGACACAGCTTCAAGTGTT+TGG | + | chr5_2:2816579-2816598 | None:intergenic | 50.0% | |
!! | TTCAGAGGGCTTGCTGTTAG+AGG | - | chr5_2:2816690-2816709 | Msa0749320:intron | 50.0% |
!! | GGCTTGCTGTTAGAGGAGAT+GGG | - | chr5_2:2816697-2816716 | Msa0749320:intron | 50.0% |
! | TTGCTGTTAGAGGAGATGGG+TGG | - | chr5_2:2816700-2816719 | Msa0749320:intron | 50.0% |
TGCTGTTAGAGGAGATGGGT+GGG | - | chr5_2:2816701-2816720 | Msa0749320:intron | 50.0% | |
CGCGCTTAAAAAGACTGGAC+TGG | - | chr5_2:2816747-2816766 | Msa0749320:intron | 50.0% | |
! | GACTGGACTGGATAACCTAG+AGG | - | chr5_2:2816759-2816778 | Msa0749320:intron | 50.0% |
TGGTCCTGCTCAAGCATATG+TGG | - | chr5_2:2816831-2816850 | Msa0749320:intron | 50.0% | |
GCAAGACTTGACAAAGGACG+GGG | - | chr5_2:2816859-2816878 | Msa0749320:intron | 50.0% | |
TGTGGACAGCATGTGGTTGT+AGG | - | chr5_2:2816922-2816941 | Msa0749320:intron | 50.0% | |
GCTCGCAGTGGGGAAAAATA+AGG | - | chr5_2:2816944-2816963 | Msa0749320:intron | 50.0% | |
! | TCAATCTCCACAGGCATTGC+TGG | + | chr5_2:2817012-2817031 | None:intergenic | 50.0% |
GCAATGCCTGTGGAGATTGA+AGG | - | chr5_2:2817012-2817031 | Msa0749320:intron | 50.0% | |
TGGAGATTGAAGGGCTTCGA+GGG | - | chr5_2:2817022-2817041 | Msa0749320:intron | 50.0% | |
! | CGGGCTAGAATGCTTAGTTC+TGG | - | chr5_2:2817090-2817109 | Msa0749320:intron | 50.0% |
CACGTCCTTGTTCTTTGTGC+GGG | + | chr5_2:2817359-2817378 | None:intergenic | 50.0% | |
CCACGTCCTTGTTCTTTGTG+CGG | + | chr5_2:2817360-2817379 | None:intergenic | 50.0% | |
GAATGTTGTCCATGTTGGCG+TGG | - | chr5_2:2817697-2817716 | Msa0749320:intron | 50.0% | |
ATGTTGTCCATGTTGGCGTG+GGG | - | chr5_2:2817699-2817718 | Msa0749320:intron | 50.0% | |
! | GCCTATTTCTCAATCCGACG+TGG | - | chr5_2:2817721-2817740 | Msa0749320:intron | 50.0% |
! | ACTAGCACGAGTTGCTGCTT+GGG | + | chr5_2:2817813-2817832 | None:intergenic | 50.0% |
TACTAGCACGAGTTGCTGCT+TGG | + | chr5_2:2817814-2817833 | None:intergenic | 50.0% | |
!! | GTCTACTGGCTCGGTTAAAC+TGG | + | chr5_2:2817998-2818017 | None:intergenic | 50.0% |
CGAAGTGGGTCAAGATTCCT+GGG | - | chr5_2:2818207-2818226 | Msa0749320:intron | 50.0% | |
CTCAGTTATTAAGGGGCGGA+GGG | - | chr5_2:2818251-2818270 | Msa0749320:intron | 50.0% | |
TGAACAGGTCAGCAACCATG+AGG | - | chr5_2:2818599-2818618 | Msa0749320:intron | 50.0% | |
CAGCAACCATGAGGCTTCTA+AGG | - | chr5_2:2818608-2818627 | Msa0749320:intron | 50.0% | |
! | ACCATGAGGCTTCTAAGGAG+TGG | - | chr5_2:2818613-2818632 | Msa0749320:intron | 50.0% |
ACCACTCCTTAGAAGCCTCA+TGG | + | chr5_2:2818617-2818636 | None:intergenic | 50.0% | |
GTCTCTTAAGAGGGAGAAGC+AGG | - | chr5_2:2818663-2818682 | Msa0749320:intron | 50.0% | |
TAAGAGGGAGAAGCAGGATG+TGG | - | chr5_2:2818669-2818688 | Msa0749320:intron | 50.0% | |
! | ACCGCAGCTCTAGCAAAGTA+TGG | - | chr5_2:2819035-2819054 | Msa0749320:intron | 50.0% |
TTTGGAAAGGGAGAGGTCGA+TGG | - | chr5_2:2819289-2819308 | Msa0749320:intron | 50.0% | |
GTCGATGGCTCTCGAATCTT+TGG | - | chr5_2:2819304-2819323 | Msa0749320:intron | 50.0% | |
ATGGCTCTCGAATCTTTGGC+AGG | - | chr5_2:2819308-2819327 | Msa0749320:intron | 50.0% | |
AGCGACCTCGCGAAGAGAAA+AGG | + | chr5_2:2808833-2808852 | None:intergenic | 55.0% | |
ACAGACCATCCTCCGCATGT+GGG | + | chr5_2:2808984-2809003 | None:intergenic | 55.0% | |
TACAGACCATCCTCCGCATG+TGG | + | chr5_2:2808985-2809004 | None:intergenic | 55.0% | |
CTACAGTAATGGCGCAGCCA+CGG | + | chr5_2:2809012-2809031 | None:intergenic | 55.0% | |
CCTTGAGAAGGGAACACTCC+AGG | + | chr5_2:2809311-2809330 | None:intergenic | 55.0% | |
! | CCTGGAGTGTTCCCTTCTCA+AGG | - | chr5_2:2809308-2809327 | Msa0749320:intron | 55.0% |
CCACAGAAATTCGCACTGGG+AGG | + | chr5_2:2809341-2809360 | None:intergenic | 55.0% | |
CCTCCCAGTGCGAATTTCTG+TGG | - | chr5_2:2809338-2809357 | Msa0749320:intron | 55.0% | |
! | GCTTTAAATGGGCTCCCCAC+TGG | - | chr5_2:2809375-2809394 | Msa0749320:exon | 55.0% |
! | TTAAATGGGCTCCCCACTGG+TGG | - | chr5_2:2809378-2809397 | Msa0749320:exon | 55.0% |
TGCAATTTGGCAGCTAGGGG+AGG | + | chr5_2:2810219-2810238 | None:intergenic | 55.0% | |
!! | ACAACGAAGGTGTCGGTGGT+TGG | + | chr5_2:2810262-2810281 | None:intergenic | 55.0% |
!! | CAACACAACGAAGGTGTCGG+TGG | + | chr5_2:2810266-2810285 | None:intergenic | 55.0% |
CACCGACACCTTCGTTGTGT+TGG | - | chr5_2:2810264-2810283 | Msa0749320:intron | 55.0% | |
!! | TCCTGCGCTCCCGCTATTTT+GGG | + | chr5_2:2812337-2812356 | None:intergenic | 55.0% |
ATGGCGGCTTTGCTGAAGCT+TGG | - | chr5_2:2814364-2814383 | Msa0749320:intron | 55.0% | |
!! | TGGTGTTGTAGCCAAAGCCC+TGG | + | chr5_2:2814574-2814593 | None:intergenic | 55.0% |
GACCCTACCACATGCCTACA+TGG | + | chr5_2:2814594-2814613 | None:intergenic | 55.0% | |
GCATCAGCAAGATGCATGCC+TGG | - | chr5_2:2814651-2814670 | Msa0749320:intron | 55.0% | |
!!! | GGGATGGGGGCACTTTTAAG+AGG | - | chr5_2:2814988-2815007 | Msa0749320:intron | 55.0% |
GGCCTAGAGTCTTGGTAGGT+AGG | - | chr5_2:2816007-2816026 | Msa0749320:intron | 55.0% | |
AAAAAGGAGGAGGGGGGGAT+TGG | + | chr5_2:2816150-2816169 | None:intergenic | 55.0% | |
TGCCTTGCGTCAAACGTCAG+TGG | - | chr5_2:2816369-2816388 | Msa0749320:intron | 55.0% | |
TGCCACTGACGTTTGACGCA+AGG | + | chr5_2:2816374-2816393 | None:intergenic | 55.0% | |
TCAAACGTCAGTGGCAGCCA+AGG | - | chr5_2:2816378-2816397 | Msa0749320:intron | 55.0% | |
GCATCTAGGTGCCTTTGTGG+TGG | - | chr5_2:2816420-2816439 | Msa0749320:intron | 55.0% | |
GCACTAAATGCAGCGTGACC+AGG | + | chr5_2:2816484-2816503 | None:intergenic | 55.0% | |
!! | GGGCTTGCTGTTAGAGGAGA+TGG | - | chr5_2:2816696-2816715 | Msa0749320:intron | 55.0% |
GCTGTTAGAGGAGATGGGTG+GGG | - | chr5_2:2816702-2816721 | Msa0749320:intron | 55.0% | |
GGAGATGGGTGGGGATATTC+AGG | - | chr5_2:2816711-2816730 | Msa0749320:intron | 55.0% | |
TGACAAAGGACGGGGTCCAT+TGG | - | chr5_2:2816867-2816886 | Msa0749320:intron | 55.0% | |
ATGTGGTTGTAGGCTCGCAG+TGG | - | chr5_2:2816932-2816951 | Msa0749320:intron | 55.0% | |
TGTGGTTGTAGGCTCGCAGT+GGG | - | chr5_2:2816933-2816952 | Msa0749320:intron | 55.0% | |
AGCAACTCCAGCAATGCCTG+TGG | - | chr5_2:2817002-2817021 | Msa0749320:intron | 55.0% | |
CGAAGCCCTTCAATCTCCAC+AGG | + | chr5_2:2817021-2817040 | None:intergenic | 55.0% | |
GTGGAGATTGAAGGGCTTCG+AGG | - | chr5_2:2817021-2817040 | Msa0749320:intron | 55.0% | |
ATGACATCGTCACCGGCCAT+TGG | + | chr5_2:2817051-2817070 | None:intergenic | 55.0% | |
GCTCTCCCGCACAAAGAACA+AGG | - | chr5_2:2817351-2817370 | Msa0749320:intron | 55.0% | |
CCGCACAAAGAACAAGGACG+TGG | - | chr5_2:2817357-2817376 | Msa0749320:intron | 55.0% | |
AAATAGGCCCCACGCCAACA+TGG | + | chr5_2:2817709-2817728 | None:intergenic | 55.0% | |
ACTATGCATGCACCGCAAGC+CGG | + | chr5_2:2817755-2817774 | None:intergenic | 55.0% | |
GCTTGCGGTGCATGCATAGT+TGG | - | chr5_2:2817755-2817774 | Msa0749320:intron | 55.0% | |
CTCGGTTAAACTGGGACGGA+GGG | + | chr5_2:2817989-2818008 | None:intergenic | 55.0% | |
!! | CTGGCTCGGTTAAACTGGGA+CGG | + | chr5_2:2817993-2818012 | None:intergenic | 55.0% |
GCGAAGTGGGTCAAGATTCC+TGG | - | chr5_2:2818206-2818225 | Msa0749320:intron | 55.0% | |
GCTCAGTTATTAAGGGGCGG+AGG | - | chr5_2:2818250-2818269 | Msa0749320:intron | 55.0% | |
CAGACCATCCTCCGCATGTG+GGG | + | chr5_2:2808983-2809002 | None:intergenic | 60.0% | |
! | GTCCTGCGCTCCCGCTATTT+TGG | + | chr5_2:2812338-2812357 | None:intergenic | 60.0% |
CGAGCCTCTGAGCAAAACGC+AGG | + | chr5_2:2812366-2812385 | None:intergenic | 60.0% | |
! | ACGTGTGGAGCGTCAACAGG+AGG | + | chr5_2:2815409-2815428 | None:intergenic | 60.0% |
TCAGTGGCAGCCAAGGAAGC+TGG | - | chr5_2:2816385-2816404 | Msa0749320:intron | 60.0% | |
TGCTGCACCTCTTGCTCGCA+TGG | + | chr5_2:2816506-2816525 | None:intergenic | 60.0% | |
GTGGTTGTAGGCTCGCAGTG+GGG | - | chr5_2:2816934-2816953 | Msa0749320:intron | 60.0% | |
ATCCGACGTGGACCTAGCAC+CGG | - | chr5_2:2817733-2817752 | Msa0749320:intron | 60.0% | |
GCTCGGTTAAACTGGGACGG+AGG | + | chr5_2:2817990-2818009 | None:intergenic | 60.0% | |
CTGAGTCTCGGGTGTACCTG+GGG | + | chr5_2:2818476-2818495 | None:intergenic | 60.0% | |
CCTGAGTCTCGGGTGTACCT+GGG | + | chr5_2:2818477-2818496 | None:intergenic | 60.0% | |
ACCTGAGTCTCGGGTGTACC+TGG | + | chr5_2:2818478-2818497 | None:intergenic | 60.0% | |
AGGTACACCCGAGACTCAGG+TGG | - | chr5_2:2818477-2818496 | Msa0749320:intron | 60.0% | |
TTGCCCAGCCACCTGAGTCT+CGG | + | chr5_2:2818488-2818507 | None:intergenic | 60.0% | |
ACCATCCTCCGCATGTGGGG+CGG | + | chr5_2:2808980-2808999 | None:intergenic | 65.0% | |
AAGGCGTAGGTGTGGGACCC+TGG | - | chr5_2:2809290-2809309 | Msa0749320:intron | 65.0% | |
ATGGGCTCCCCACTGGTGGA+TGG | - | chr5_2:2809382-2809401 | Msa0749320:exon | 65.0% | |
AGGCCTCGACCCTTGTGCCA+CGG | - | chr5_2:2811625-2811644 | Msa0749320:CDS | 65.0% | |
AACCCGTGGCACAAGGGTCG+AGG | + | chr5_2:2811631-2811650 | None:intergenic | 65.0% | |
! | GCCCAAAATAGCGGGAGCGC+AGG | - | chr5_2:2812333-2812352 | Msa0749320:intron | 65.0% |
! | GTGGAGCGTCAACAGGAGGC+TGG | + | chr5_2:2815405-2815424 | None:intergenic | 65.0% |
! | GGGACGTGTGGAGCGTCAAC+AGG | + | chr5_2:2815412-2815431 | None:intergenic | 65.0% |
AGGGGGGGATTGGAGTGTGG+CGG | + | chr5_2:2816140-2816159 | None:intergenic | 65.0% | |
AGGAGGGGGGGATTGGAGTG+TGG | + | chr5_2:2816143-2816162 | None:intergenic | 65.0% | |
GTGGCAGCCAAGGAAGCTGG+TGG | - | chr5_2:2816388-2816407 | Msa0749320:intron | 65.0% | |
AGGGCTTCGAGGGCTGCCAA+TGG | - | chr5_2:2817032-2817051 | Msa0749320:intron | 65.0% | |
CTTCGAGGGCTGCCAATGGC+CGG | - | chr5_2:2817036-2817055 | Msa0749320:intron | 65.0% | |
! | AGCCGGTGCTAGGTCCACGT+CGG | + | chr5_2:2817738-2817757 | None:intergenic | 65.0% |
!! | GTGGACCTAGCACCGGCTTG+CGG | - | chr5_2:2817740-2817759 | Msa0749320:intron | 65.0% |
ATGCACCGCAAGCCGGTGCT+AGG | + | chr5_2:2817748-2817767 | None:intergenic | 65.0% | |
CCCAGGTACACCCGAGACTC+AGG | - | chr5_2:2818474-2818493 | Msa0749320:intron | 65.0% | |
ACACCCGAGACTCAGGTGGC+TGG | - | chr5_2:2818481-2818500 | Msa0749320:intron | 65.0% | |
CACCCGAGACTCAGGTGGCT+GGG | - | chr5_2:2818482-2818501 | Msa0749320:intron | 65.0% | |
TGCCCAGCCACCTGAGTCTC+GGG | + | chr5_2:2818487-2818506 | None:intergenic | 65.0% | |
GCCAAACGCCGCCCCACATG+CGG | - | chr5_2:2808969-2808988 | Msa0749320:three_prime_UTR | 70.0% | |
TCCGCATGTGGGGCGGCGTT+TGG | + | chr5_2:2808973-2808992 | None:intergenic | 70.0% | |
AAACGCCGCCCCACATGCGG+AGG | - | chr5_2:2808972-2808991 | Msa0749320:three_prime_UTR | 70.0% | |
! | GGCTCCCCACTGGTGGATGG+TGG | - | chr5_2:2809385-2809404 | Msa0749320:CDS | 70.0% |
GGCCTCGACCCTTGTGCCAC+GGG | - | chr5_2:2811626-2811645 | Msa0749320:CDS | 70.0% | |
GCCGCCCCACATGCGGAGGA+TGG | - | chr5_2:2808976-2808995 | Msa0749320:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 2808779 | 2819446 | 2808779 | ID=Msa0749320;Name=Msa0749320 |
chr5_2 | mRNA | 2808779 | 2819446 | 2808779 | ID=Msa0749320-mRNA-1;Parent=Msa0749320;Name=Msa0749320-mRNA-1;_AED=0.12;_eAED=0.12;_QI=205|0.87|1|1|0.62|0.44|9|252|669 |
chr5_2 | exon | 2808779 | 2808993 | 2808779 | ID=Msa0749320-mRNA-1:exon:935;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2809348 | 2809816 | 2809348 | ID=Msa0749320-mRNA-1:exon:934;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2810935 | 2811972 | 2810935 | ID=Msa0749320-mRNA-1:exon:933;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2812601 | 2812922 | 2812601 | ID=Msa0749320-mRNA-1:exon:932;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2813391 | 2813457 | 2813391 | ID=Msa0749320-mRNA-1:exon:931;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2813553 | 2813673 | 2813553 | ID=Msa0749320-mRNA-1:exon:930;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2813832 | 2813877 | 2813832 | ID=Msa0749320-mRNA-1:exon:929;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2814157 | 2814247 | 2814157 | ID=Msa0749320-mRNA-1:exon:928;Parent=Msa0749320-mRNA-1 |
chr5_2 | exon | 2819349 | 2819446 | 2819349 | ID=Msa0749320-mRNA-1:exon:927;Parent=Msa0749320-mRNA-1 |
chr5_2 | five_prime_UTR | 2819349 | 2819446 | 2819349 | ID=Msa0749320-mRNA-1:five_prime_utr;Parent=Msa0749320-mRNA-1 |
chr5_2 | five_prime_UTR | 2814157 | 2814247 | 2814157 | ID=Msa0749320-mRNA-1:five_prime_utr;Parent=Msa0749320-mRNA-1 |
chr5_2 | five_prime_UTR | 2813862 | 2813877 | 2813862 | ID=Msa0749320-mRNA-1:five_prime_utr;Parent=Msa0749320-mRNA-1 |
chr5_2 | CDS | 2813832 | 2813861 | 2813832 | ID=Msa0749320-mRNA-1:cds;Parent=Msa0749320-mRNA-1 |
chr5_2 | CDS | 2813553 | 2813673 | 2813553 | ID=Msa0749320-mRNA-1:cds;Parent=Msa0749320-mRNA-1 |
chr5_2 | CDS | 2813391 | 2813457 | 2813391 | ID=Msa0749320-mRNA-1:cds;Parent=Msa0749320-mRNA-1 |
chr5_2 | CDS | 2812601 | 2812922 | 2812601 | ID=Msa0749320-mRNA-1:cds;Parent=Msa0749320-mRNA-1 |
chr5_2 | CDS | 2810935 | 2811972 | 2810935 | ID=Msa0749320-mRNA-1:cds;Parent=Msa0749320-mRNA-1 |
chr5_2 | CDS | 2809385 | 2809816 | 2809385 | ID=Msa0749320-mRNA-1:cds;Parent=Msa0749320-mRNA-1 |
chr5_2 | three_prime_UTR | 2809348 | 2809384 | 2809348 | ID=Msa0749320-mRNA-1:three_prime_utr;Parent=Msa0749320-mRNA-1 |
chr5_2 | three_prime_UTR | 2808779 | 2808993 | 2808779 | ID=Msa0749320-mRNA-1:three_prime_utr;Parent=Msa0749320-mRNA-1 |
Gene Sequence |
Protein sequence |