AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0759690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0759690 MtrunA17_Chr5g0407831 96.379 580 20 1 46 624 1 580 0.0 1144
Msa0759690 MtrunA17_Chr5g0419261 31.373 408 244 10 216 618 59 435 8.28e-53 187
Msa0759690 MtrunA17_Chr4g0039601 30.641 359 214 5 204 557 86 414 1.50e-47 174
Msa0759690 MtrunA17_Chr4g0076831 30.919 359 213 5 204 557 98 426 2.47e-46 171
Msa0759690 MtrunA17_Chr7g0261271 28.933 356 224 6 211 564 41 369 5.28e-45 165
Msa0759690 MtrunA17_Chr7g0242281 28.155 412 249 10 209 609 101 476 1.47e-37 145
Msa0759690 MtrunA17_Chr7g0237291 28.692 237 163 3 229 459 117 353 6.37e-26 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0759690 AT3G45890.1 67.137 496 153 4 130 622 108 596 0.0 646
Msa0759690 AT2G31190.2 27.273 396 252 5 213 607 60 420 4.43e-45 166
Msa0759690 AT2G31190.1 27.273 396 252 5 213 607 61 421 5.00e-45 166
Msa0759690 AT1G13770.1 26.988 415 263 7 212 618 46 428 9.95e-44 162
Msa0759690 AT5G49820.1 29.167 360 220 5 201 557 93 420 1.11e-43 164
Msa0759690 AT1G13770.3 32.283 254 170 2 212 463 46 299 1.77e-39 149
Msa0759690 AT1G13770.4 33.054 239 158 2 212 448 46 284 6.66e-38 143
Msa0759690 AT5G01510.1 29.570 372 212 9 210 563 110 449 5.51e-36 142
Msa0759690 AT1G13770.2 26.075 372 235 7 255 618 2 341 1.44e-32 129
Msa0759690 AT2G23470.1 27.723 303 188 7 169 459 78 361 1.06e-21 99.4

Find 188 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAATTATTTGACCCTTTC+TGG -0.070114 5_2:-15445502 None:intergenic
TCCACCTTTGACTTCGTAAA+TGG 0.164001 5_2:-15439755 None:intergenic
TGCAAAAGGTGCATTTAATA+TGG 0.174409 5_2:-15443292 None:intergenic
AAAATATCTTTCAAATTATC+AGG 0.186978 5_2:-15439796 None:intergenic
GTGAGAAAGGGTTAGTTTAA+TGG 0.190389 5_2:-15439497 None:intergenic
TTCAGGTCAACTATCTTTAT+TGG 0.200578 5_2:+15444990 Msa0759690:CDS
CCCAGAAAGGGTCAAATAAT+TGG 0.217871 5_2:+15445501 Msa0759690:three_prime_UTR
CTACTGCTGCTGCTATTAAT+TGG 0.225245 5_2:+15440073 Msa0759690:CDS
ATCGGCTGCTTCTTTGATTC+AGG 0.226402 5_2:+15440287 Msa0759690:CDS
TTGCTTTATGCTGTTGGATT+AGG 0.232540 5_2:+15440036 Msa0759690:CDS
TTGCAAGGCCTTTGCCTAAT+AGG 0.236993 5_2:+15445164 Msa0759690:CDS
CCTCATTTGTTTGTGCCTAT+TGG 0.241923 5_2:+15440243 Msa0759690:CDS
AGACAGGTGAATTGGCATTT+TGG 0.243253 5_2:-15445452 None:intergenic
TATGCTCAAGGCATTGTTTC+AGG 0.243254 5_2:+15444973 Msa0759690:CDS
TAATCACTTGTTACACTGTT+TGG 0.259826 5_2:-15439940 None:intergenic
CTTCTTGAAAATGCCGCGTT+TGG 0.270026 5_2:+15440195 Msa0759690:CDS
GTTGATAATTTCACTGAGTT+TGG 0.271221 5_2:-15444714 None:intergenic
ATTATTTAGAGTATTCATTA+TGG 0.281377 5_2:+15439959 Msa0759690:CDS
TTATGCAGAGGTGATTGTTT+TGG 0.293366 5_2:-15445791 None:intergenic
GGAATGGTCAGCAGGTTTAT+TGG 0.296149 5_2:+15441640 Msa0759690:CDS
GCAAACAATCTCCACCCTTT+AGG 0.298157 5_2:-15440168 None:intergenic
ACTAGGAGTTGTTTCTTTGC+CGG 0.301778 5_2:+15441364 Msa0759690:CDS
CACCAGGTTTGCAGTCATAA+AGG 0.314449 5_2:-15445048 None:intergenic
TTTCCTGGCCGACACCTATT+AGG 0.314825 5_2:-15445178 None:intergenic
TGCTTTATGCTGTTGGATTA+GGG 0.315617 5_2:+15440037 Msa0759690:CDS
TACTGCTGCTGCTATTAATT+GGG 0.327045 5_2:+15440074 Msa0759690:CDS
AAAGTGGTGGCCGGGAAATG+TGG 0.332398 5_2:-15439460 None:intergenic
CCAATTATTTGACCCTTTCT+GGG 0.334358 5_2:-15445501 None:intergenic
TGGGTTCTGAAAGATGGAAT+TGG 0.348284 5_2:+15440093 Msa0759690:CDS
TGTTCAAGGTGTTGCTTGTC+AGG 0.357220 5_2:+15439987 Msa0759690:CDS
GAGGTGAAGAGGAGGAAGAA+GGG 0.369224 5_2:-15439416 None:intergenic
GTGGTAGTGGTGGTGATTCA+TGG 0.370571 5_2:+15439569 Msa0759690:CDS
AGAATAGTAAAGTAAACAAA+AGG 0.371289 5_2:-15439651 None:intergenic
TCGGCATTGACCTCTTTAAC+TGG 0.376774 5_2:-15443246 None:intergenic
TGCTGTATTTGTATCATTTG+TGG 0.380121 5_2:-15445707 None:intergenic
ACCAGGTTTGCAGTCATAAA+GGG 0.382621 5_2:-15445047 None:intergenic
GAAAGAGGAAGTTGCAGTTC+AGG 0.383543 5_2:+15439270 Msa0759690:CDS
TTCAATCATGTTAGAGATGA+TGG 0.385348 5_2:+15445109 Msa0759690:CDS
GCAAAAGGTGCATTTAATAT+GGG 0.389414 5_2:-15443291 None:intergenic
CAGTGAAATTATCAACAATA+AGG 0.394039 5_2:+15444721 Msa0759690:CDS
CAAGCTTTGCTTTATGCTGT+TGG 0.395995 5_2:+15440030 Msa0759690:CDS
GGGGTGGTGGTGGACGGTGG+CGG 0.396755 5_2:-15439438 None:intergenic
CAACTCACTTTGTTTGCAAA+AGG 0.397360 5_2:-15443306 None:intergenic
GTGGTGGTGGACGGTGGCGG+AGG 0.399869 5_2:-15439435 None:intergenic
ACACTGTTTGGAAAACCTTC+AGG 0.404237 5_2:-15439928 None:intergenic
TTCTTGAAAATGCCGCGTTT+GGG 0.406635 5_2:+15440196 Msa0759690:CDS
GGAGGTGAAGAGGAGGAAGA+AGG 0.407272 5_2:-15439417 None:intergenic
GAAACTCACTCCATGTTTCC+TGG 0.409799 5_2:-15445193 None:intergenic
ATTAATTGGGTTCTGAAAGA+TGG 0.412199 5_2:+15440087 Msa0759690:CDS
TGGTAGTGGTGGTGATTCAT+GGG 0.416335 5_2:+15439570 Msa0759690:CDS
CTGATATGGTGAATGGCTGC+TGG 0.417265 5_2:+15445215 Msa0759690:three_prime_UTR
CCACCTTTGACTTCGTAAAT+GGG 0.418270 5_2:-15439754 None:intergenic
GTCAGCAGGTTTATTGGTAT+CGG 0.418772 5_2:+15441646 Msa0759690:CDS
AGGTTTATTGGTATCGGGCT+TGG 0.420034 5_2:+15441652 Msa0759690:CDS
ATTGGTATCGGGCTTGGTAT+AGG 0.421709 5_2:+15441658 Msa0759690:CDS
TTGACAAAAGACAGGTGAAT+TGG 0.422110 5_2:-15445460 None:intergenic
ATTCCTTTGAGCAGCGAAAC+CGG 0.423226 5_2:-15441383 None:intergenic
ATTTAAAGTCCGCAATTGAA+TGG 0.424599 5_2:-15441779 None:intergenic
GGGTTCTGAAAGATGGAATT+GGG 0.426987 5_2:+15440094 Msa0759690:CDS
TGTTATTACCGCCGGTGGGA+AGG 0.430675 5_2:-15439537 None:intergenic
AAACAATCACCTCTGCATAA+AGG 0.431457 5_2:+15445794 Msa0759690:three_prime_UTR
AACAATAACAATGGTGGTAG+TGG 0.437772 5_2:+15439556 Msa0759690:CDS
TTTGACTTCGTAAATGGGTT+GGG 0.442902 5_2:-15439749 None:intergenic
CGCCTTTCAGCCCTTCCCAC+CGG 0.445665 5_2:+15439526 Msa0759690:CDS
TAAAGAAACTTGTTCACAGC+TGG 0.446726 5_2:+15444949 Msa0759690:CDS
AGTGGTGGCCGGGAAATGTG+GGG 0.449641 5_2:-15439458 None:intergenic
GAGAAGAACGCAGGAATTGA+AGG 0.449777 5_2:+15445016 Msa0759690:CDS
CCAGAAAGGGTCAAATAATT+GGG 0.450291 5_2:+15445502 Msa0759690:three_prime_UTR
ATCTCTAGAATATGCGGAAA+GGG 0.452770 5_2:+15445084 Msa0759690:CDS
ATGCTGTTGGATTAGGGAAA+GGG 0.454870 5_2:+15440043 Msa0759690:CDS
GCACCAGCAAAAGCACCAAT+AGG 0.457783 5_2:-15440258 None:intergenic
GATGAATCGTCAGAGTCAAA+AGG 0.462001 5_2:-15439601 None:intergenic
TCAAGATGTTGAGGTATTCA+AGG 0.462945 5_2:+15445295 Msa0759690:three_prime_UTR
GCATTTAATATGGGTACTGC+TGG 0.463288 5_2:-15443282 None:intergenic
TTGAATCAACCTGGATTCCT+CGG 0.465616 5_2:-15445276 None:intergenic
AAGTGGTGGCCGGGAAATGT+GGG 0.466781 5_2:-15439459 None:intergenic
CTTTGACTTCGTAAATGGGT+TGG 0.467330 5_2:-15439750 None:intergenic
TCAGCAGGTTTATTGGTATC+GGG 0.474154 5_2:+15441647 Msa0759690:CDS
TCAAAGGTGGAAACTTGATT+AGG 0.475423 5_2:+15439767 Msa0759690:CDS
GTGGTGGCCGGGAAATGTGG+GGG 0.476589 5_2:-15439457 None:intergenic
ACCCTTTATGACTGCAAACC+TGG 0.478263 5_2:+15445046 Msa0759690:CDS
TTATTTGACCCTTTCTGGGT+CGG 0.479866 5_2:-15445497 None:intergenic
CATGGAGTGAGTTTCTGATA+TGG 0.480178 5_2:+15445201 Msa0759690:exon
CCTCTTTAACTGGAGGAGCC+TGG 0.481223 5_2:-15443236 None:intergenic
GTTATTACCGCCGGTGGGAA+GGG 0.489272 5_2:-15439536 None:intergenic
AGGTATTCAAGGGCATTGAT+TGG 0.489346 5_2:+15445306 Msa0759690:three_prime_UTR
TCATTATGGAGAGGTGTTCA+AGG 0.490357 5_2:+15439973 Msa0759690:CDS
GAATAGTAAAGTAAACAAAA+GGG 0.499457 5_2:-15439650 None:intergenic
AAGTCCGCAATTGAATGGAC+TGG 0.501879 5_2:-15441774 None:intergenic
AAGAGGAGGAAGAAGGGAAG+CGG 0.501956 5_2:-15439410 None:intergenic
ACCTCTGCATAAAGGCTAGT+AGG 0.501988 5_2:+15445802 Msa0759690:three_prime_UTR
GGACGGTGGCGGAGGTGAAG+AGG 0.502855 5_2:-15439427 None:intergenic
AAAGGCGAAAAGAGTGAGAA+AGG 0.503041 5_2:-15439510 None:intergenic
GAAGATGGCATTGAAATCTC+AGG 0.505626 5_2:-15439294 None:intergenic
ACTGATTCAGTTTACGAAAG+AGG 0.507122 5_2:+15439255 None:intergenic
TGTCAGTGTATGTGATTGAA+TGG 0.508400 5_2:-15439359 None:intergenic
TATCGGGCTTGGTATAGGAC+TGG 0.509466 5_2:+15441663 Msa0759690:CDS
TGAAAATGCCGCGTTTGGGT+TGG 0.509827 5_2:+15440200 Msa0759690:CDS
CTCAACATCTTGAATCAACC+TGG 0.515554 5_2:-15445285 None:intergenic
TTGCCGGTTTCGCTGCTCAA+AGG 0.516830 5_2:+15441380 Msa0759690:CDS
CGCCGGTGGGAAGGGCTGAA+AGG 0.519757 5_2:-15439528 None:intergenic
AAGTTCAAGGAATGGTCAGC+AGG 0.525159 5_2:+15441632 Msa0759690:CDS
AAATTATAGGTAATTGCTAA+AGG 0.526664 5_2:+15441607 Msa0759690:intron
ATGCAACTCTGCTGGTGTAA+TGG 0.527579 5_2:+15445373 Msa0759690:three_prime_UTR
TATGCTGTTGGATTAGGGAA+AGG 0.529861 5_2:+15440042 Msa0759690:CDS
ATGAATCGTCAGAGTCAAAA+GGG 0.532944 5_2:-15439600 None:intergenic
AAGAGTGGAAAGTGGTGGCC+GGG 0.533879 5_2:-15439468 None:intergenic
AAAGAGTGGAAAGTGGTGGC+CGG 0.535403 5_2:-15439469 None:intergenic
TAGGTGTCGGCCAGGAAACA+TGG 0.535700 5_2:+15445183 Msa0759690:CDS
ACAAACAAATGAGGAAAAGC+AGG 0.536369 5_2:-15440234 None:intergenic
ATTGAAAGCCGTCTGCAGCT+TGG 0.536378 5_2:+15444689 Msa0759690:CDS
ATTGCTAAAGGTGAAGTTCA+AGG 0.538236 5_2:+15441619 Msa0759690:CDS
TGAATCAACCTGGATTCCTC+GGG 0.539173 5_2:-15445275 None:intergenic
CTACATCTTGTCTGAGAACA+CGG 0.541794 5_2:+15444784 Msa0759690:CDS
CGGTGGCGGAGGTGAAGAGG+AGG 0.544240 5_2:-15439424 None:intergenic
TGCTGGAAATAGCGGCTCCT+CGG 0.547768 5_2:-15443265 None:intergenic
TTGCCTAATAGGTGTCGGCC+AGG 0.550933 5_2:+15445175 Msa0759690:CDS
ATGATGGAGAATCAGTTGGT+TGG 0.551606 5_2:+15445125 Msa0759690:CDS
TGAATGGACCGACCCAGAAA+GGG 0.552329 5_2:+15445489 Msa0759690:three_prime_UTR
TGCAAAGCATGCAACTCTGC+TGG 0.554272 5_2:+15445365 Msa0759690:three_prime_UTR
CAGTTGGTTGGATCACAGAC+GGG 0.556029 5_2:+15445137 Msa0759690:CDS
TGCTGTTGGATTAGGGAAAG+GGG 0.556262 5_2:+15440044 Msa0759690:CDS
CCAGGCTCCTCCAGTTAAAG+AGG 0.557019 5_2:+15443236 Msa0759690:CDS
AACTCTGCTGGTGTAATGGC+TGG 0.557213 5_2:+15445377 Msa0759690:three_prime_UTR
GTGAATGGACCGACCCAGAA+AGG 0.558243 5_2:+15445488 Msa0759690:three_prime_UTR
AAATTATTGAAGCCACTTGG+TGG 0.561048 5_2:+15445411 Msa0759690:three_prime_UTR
ATCAAATTATTGAAGCCACT+TGG 0.561950 5_2:+15445408 Msa0759690:three_prime_UTR
AAATATCTTTCAAATTATCA+GGG 0.562849 5_2:-15439795 None:intergenic
AGATACTTACTTGCACGGTA+AGG 0.563262 5_2:-15441802 None:intergenic
ATAGGACTGGGCAACTGCAT+AGG 0.564186 5_2:+15441676 Msa0759690:CDS
ATTGTTATTGTTATTACCGC+CGG 0.564829 5_2:-15439545 None:intergenic
ATCGGGCTTGGTATAGGACT+GGG 0.569657 5_2:+15441664 Msa0759690:CDS
TGAATATCTACTGAGTGGCC+AGG 0.570442 5_2:+15443218 Msa0759690:CDS
GCAAATATCTCTAGAATATG+CGG 0.570621 5_2:+15445078 Msa0759690:CDS
TCAACAGATAGAAATGAAGA+TGG 0.571589 5_2:-15439309 None:intergenic
CAATTAATAGCAGCAGCAGT+AGG 0.574089 5_2:-15440072 None:intergenic
GATATTTGCAGCCTACCACC+AGG 0.576359 5_2:-15445064 None:intergenic
TGAGTTTCTGATATGGTGAA+TGG 0.578107 5_2:+15445208 Msa0759690:exon
CTTTCAGCCCTTCCCACCGG+CGG 0.578194 5_2:+15439529 Msa0759690:CDS
CAAGATGTTGAGGTATTCAA+GGG 0.581251 5_2:+15445296 Msa0759690:three_prime_UTR
CCCATTTACGAAGTCAAAGG+TGG 0.581264 5_2:+15439754 Msa0759690:CDS
TATCTCTAGAATATGCGGAA+AGG 0.584046 5_2:+15445083 Msa0759690:CDS
GTTTGGATCCAAGCTGCAGA+CGG 0.584736 5_2:-15444697 None:intergenic
TTGTCAGGTGAGTGGAGTGT+TGG 0.587365 5_2:+15440002 Msa0759690:CDS
CACTGACGTTGACAAAAGAC+AGG 0.588575 5_2:-15445468 None:intergenic
GGCCTTTGCCTAATAGGTGT+CGG 0.590846 5_2:+15445170 Msa0759690:CDS
TTCACAGCTGGATATGCTCA+AGG 0.591212 5_2:+15444961 Msa0759690:CDS
TCACAGACGGGCTTATTGCA+AGG 0.591458 5_2:+15445149 Msa0759690:CDS
GTTATTGTTATTACCGCCGG+TGG 0.592693 5_2:-15439542 None:intergenic
GGTGTTGCTTGTCAGGTGAG+TGG 0.592788 5_2:+15439994 Msa0759690:CDS
TCAGAAGATACTTACTTGCA+CGG 0.594123 5_2:-15441807 None:intergenic
GAGTTGCATGCTTTGCACCA+TGG 0.594770 5_2:-15445359 None:intergenic
TCAGTTGGTTGGATCACAGA+CGG 0.595142 5_2:+15445136 Msa0759690:CDS
TTAGAGTATTCATTATGGAG+AGG 0.595537 5_2:+15439964 Msa0759690:CDS
TACACTGACAGTGCACAACA+TGG 0.597208 5_2:+15439372 Msa0759690:CDS
GGCCGACACCTATTAGGCAA+AGG 0.598323 5_2:-15445172 None:intergenic
TAAAGGTGAAGTTCAAGGAA+TGG 0.600002 5_2:+15441624 Msa0759690:CDS
AACGCAGGAATTGAAGGTAG+AGG 0.600518 5_2:+15445022 Msa0759690:CDS
CCAATAGGCACAAACAAATG+AGG 0.602116 5_2:-15440243 None:intergenic
ACTTTAGATTGCAGTACATG+TGG 0.602536 5_2:-15441747 None:intergenic
CTGTTGAAGATTGCATTCCA+TGG 0.603487 5_2:+15445342 Msa0759690:three_prime_UTR
GCCTACTAGCCTTTATGCAG+AGG 0.604317 5_2:-15445803 None:intergenic
GTTAGGTTGATGCTACCTGA+AGG 0.606557 5_2:+15439913 Msa0759690:CDS
TGAAATTATCAACAATAAGG+AGG 0.608285 5_2:+15444724 Msa0759690:CDS
ATGGGTACTGCTGGAAATAG+CGG 0.609812 5_2:-15443273 None:intergenic
AGAGATGATGGAGAATCAGT+TGG 0.613056 5_2:+15445121 Msa0759690:CDS
GATAATTCAGAAAACAACCC+GGG 0.614380 5_2:-15439832 None:intergenic
CAGGTTGATTCAAGATGTTG+AGG 0.617694 5_2:+15445286 Msa0759690:three_prime_UTR
GGTAGTGGTGGTGATTCATG+GGG 0.619935 5_2:+15439571 Msa0759690:CDS
ATGACTGCAAACCTGGTGGT+AGG 0.621598 5_2:+15445053 Msa0759690:CDS
GGTAATAACAATAACAATGG+TGG 0.623965 5_2:+15439550 Msa0759690:CDS
AAGGCGAAAAGAGTGAGAAA+GGG 0.624047 5_2:-15439509 None:intergenic
GGCGGTAATAACAATAACAA+TGG 0.624712 5_2:+15439547 Msa0759690:CDS
TTGATGTTAATCCTAAAGGG+TGG 0.627399 5_2:+15440157 Msa0759690:CDS
CAACCCATTTACGAAGTCAA+AGG 0.627476 5_2:+15439751 Msa0759690:CDS
AGAAGCAAGAACAAGAGGCG+TGG 0.631032 5_2:-15441704 None:intergenic
GCATTGACCTCTTTAACTGG+AGG 0.635173 5_2:-15443243 None:intergenic
CTTACCAGTCCATTCAATTG+CGG 0.638336 5_2:+15441770 Msa0759690:CDS
TTCAGTGAATATCTACTGAG+TGG 0.652633 5_2:+15443213 Msa0759690:CDS
AATAACAATGGTGGTAGTGG+TGG 0.660261 5_2:+15439559 Msa0759690:CDS
TGATAATTCAGAAAACAACC+CGG 0.662362 5_2:-15439833 None:intergenic
TATTGGTTAGAGAAGAACGC+AGG 0.668556 5_2:+15445007 Msa0759690:CDS
ACACTGACAGTGCACAACAT+GGG 0.670107 5_2:+15439373 Msa0759690:CDS
AGTTAAAGAGGTCAATGCCG+AGG 0.671960 5_2:+15443248 Msa0759690:CDS
TACATCTTGTCTGAGAACAC+GGG 0.680805 5_2:+15444785 Msa0759690:CDS
TTATTGTTATTACCGCCGGT+GGG 0.695449 5_2:-15439541 None:intergenic
ACACATCTCCAACCCAAACG+CGG 0.707264 5_2:-15440208 None:intergenic
CTTTATGACTGCAAACCTGG+TGG 0.707951 5_2:+15445049 Msa0759690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTAATGCTAATT+TGG + chr5_2:15442759-15442778 Msa0759690:intron 10.0%
!!! CAAATCATTTTAAAAAAAAA+AGG - chr5_2:15442794-15442813 None:intergenic 10.0%
!!! ATTATTTTAATCGTTAATAT+TGG + chr5_2:15442878-15442897 Msa0759690:intron 10.0%
!!! TAATATTATTGATAATAACT+TGG + chr5_2:15443742-15443761 Msa0759690:intron 10.0%
!! ATAAATTAGTAGTATTAATA+AGG + chr5_2:15444345-15444364 Msa0759690:intron 10.0%
!! TAAATTAGTAGTATTAATAA+GGG + chr5_2:15444346-15444365 Msa0759690:intron 10.0%
!!! AAATTTTCTATTATATTTCA+TGG + chr5_2:15444875-15444894 Msa0759690:intron 10.0%
!!! AATTTTCTATTATATTTCAT+GGG + chr5_2:15444876-15444895 Msa0759690:intron 10.0%
!! AAATATCTTTCAAATTATCA+GGG - chr5_2:15439798-15439817 None:intergenic 15.0%
!! AAAATATCTTTCAAATTATC+AGG - chr5_2:15439799-15439818 None:intergenic 15.0%
!!! ATTATTTAGAGTATTCATTA+TGG + chr5_2:15439959-15439978 Msa0759690:CDS 15.0%
!!! ATTTTTATATCTTTGCAAAA+CGG - chr5_2:15440941-15440960 None:intergenic 15.0%
!!! GTATATAATTTTTGTCTATT+TGG + chr5_2:15441225-15441244 Msa0759690:intron 15.0%
!! GAAAAATAACTCTAAATTAT+AGG + chr5_2:15441594-15441613 Msa0759690:intron 15.0%
!! AACTCAAAAAAATTAATAAG+GGG - chr5_2:15442073-15442092 None:intergenic 15.0%
!! GAACTCAAAAAAATTAATAA+GGG - chr5_2:15442074-15442093 None:intergenic 15.0%
!!! GAGATATGAAAATTAATTTT+AGG + chr5_2:15443836-15443855 Msa0759690:intron 15.0%
!! AAATTAGTAGTATTAATAAG+GGG + chr5_2:15444347-15444366 Msa0759690:intron 15.0%
!!! TTTTCTCTTTATAAAAATGA+AGG + chr5_2:15444761-15444780 Msa0759690:CDS 15.0%
!! GAATAGTAAAGTAAACAAAA+GGG - chr5_2:15439653-15439672 None:intergenic 20.0%
!! AGAATAGTAAAGTAAACAAA+AGG - chr5_2:15439654-15439673 None:intergenic 20.0%
!!! ATTTTGATGTTAATCCTAAA+GGG + chr5_2:15440154-15440173 Msa0759690:CDS 20.0%
!! ATTATCAAAATGAGATTCAT+TGG + chr5_2:15440388-15440407 Msa0759690:intron 20.0%
!!! TTTTAATATTGCAATGTGTT+TGG + chr5_2:15440423-15440442 Msa0759690:intron 20.0%
!! ATTATCAAAATGAGATTCAT+TGG + chr5_2:15440388-15440407 Msa0759690:intron 20.0%
!! ATACTAAAACAACATTAAAC+AGG - chr5_2:15440768-15440787 None:intergenic 20.0%
!! TGAATGGTTTAAAAAAACTA+TGG - chr5_2:15440980-15440999 None:intergenic 20.0%
!! CTTATAGATATAATAGAACT+TGG + chr5_2:15441076-15441095 Msa0759690:intron 20.0%
!! AAATTATAGGTAATTGCTAA+AGG + chr5_2:15441607-15441626 Msa0759690:intron 20.0%
!! ATAAATAGACAGAAAGAATT+TGG + chr5_2:15442020-15442039 Msa0759690:intron 20.0%
!! TAAATAGACAGAAAGAATTT+GGG + chr5_2:15442021-15442040 Msa0759690:intron 20.0%
!! GGAACTCAAAAAAATTAATA+AGG - chr5_2:15442075-15442094 None:intergenic 20.0%
!!! AAAAGCTGATTTATGATTTT+TGG + chr5_2:15442686-15442705 Msa0759690:intron 20.0%
!!! TAAATGGTATGTTTTTTTGA+AGG - chr5_2:15442930-15442949 None:intergenic 20.0%
!!! TTATCATATAATTTTGTCTC+TGG + chr5_2:15443008-15443027 Msa0759690:intron 20.0%
!! ATGTTTCTTTAATCAATTGT+TGG + chr5_2:15443092-15443111 Msa0759690:intron 20.0%
!! GGTAAAATAATCAATAAACA+AGG - chr5_2:15443183-15443202 None:intergenic 20.0%
!!! TGTTTATTGATTATTTTACC+AGG + chr5_2:15443183-15443202 Msa0759690:intron 20.0%
!! TATATAGCAAATTTCTAATC+TGG - chr5_2:15443391-15443410 None:intergenic 20.0%
!! TTTATATCTCAATATCTCTT+TGG + chr5_2:15443438-15443457 Msa0759690:intron 20.0%
!! TTATATCTCAATATCTCTTT+GGG + chr5_2:15443439-15443458 Msa0759690:intron 20.0%
!!! CATATATCTTCTTTTTTTGA+AGG + chr5_2:15444255-15444274 Msa0759690:intron 20.0%
!! AATTTATCTTGAAAGATGAA+AGG - chr5_2:15444332-15444351 None:intergenic 20.0%
!!! TGATTGGTATTTTTTTTTGA+AGG + chr5_2:15444542-15444561 Msa0759690:intron 20.0%
!!! GATTGGTATTTTTTTTTGAA+GGG + chr5_2:15444543-15444562 Msa0759690:intron 20.0%
!!! TTTTGTAGTTATATATTAGC+TGG - chr5_2:15444857-15444876 None:intergenic 20.0%
!! CATTTTCAGATGATAAAGAA+CGG - chr5_2:15439720-15439739 None:intergenic 25.0%
! CACTTATTATACAAAAAGCT+TGG - chr5_2:15439880-15439899 None:intergenic 25.0%
!!! TCTTAGTAAGATTTTGTTGT+CGG + chr5_2:15440119-15440138 Msa0759690:CDS 25.0%
!!! CATTTTGATGTTAATCCTAA+AGG + chr5_2:15440153-15440172 Msa0759690:CDS 25.0%
!! GTTGATAGATAAGTTTCTAA+AGG - chr5_2:15440342-15440361 None:intergenic 25.0%
! TATGTAAAAAGTTCCTGTTA+AGG + chr5_2:15440833-15440852 Msa0759690:intron 25.0%
! CCTATATAATCAAACTGAAA+AGG - chr5_2:15441431-15441450 None:intergenic 25.0%
!! CCTTTTCAGTTTGATTATAT+AGG + chr5_2:15441428-15441447 Msa0759690:intron 25.0%
! TGTTACTCTTGAAAAGAATT+TGG + chr5_2:15441879-15441898 Msa0759690:intron 25.0%
! TGAAAAGAATTTGGTTATAC+CGG + chr5_2:15441888-15441907 Msa0759690:intron 25.0%
! TCAAAAAAATTAATAAGGGG+AGG - chr5_2:15442070-15442089 None:intergenic 25.0%
! GAGATATCACAAACTATTTA+GGG - chr5_2:15442222-15442241 None:intergenic 25.0%
! AGAGATATCACAAACTATTT+AGG - chr5_2:15442223-15442242 None:intergenic 25.0%
! TATGGTTCAATTGGTTAAAT+CGG - chr5_2:15442251-15442270 None:intergenic 25.0%
!!! ATAAGAAGTGCTTTAAAATC+CGG - chr5_2:15442296-15442315 None:intergenic 25.0%
! AAGAAATTCAAGATTCTCTA+AGG - chr5_2:15442349-15442368 None:intergenic 25.0%
! GAGAATCTTGAATTTCTTAT+AGG + chr5_2:15442351-15442370 Msa0759690:intron 25.0%
! TTTCTTTAATCAATTGTTGG+AGG + chr5_2:15443095-15443114 Msa0759690:intron 25.0%
!!! GGTTTGATTTGTTTGTTAAA+AGG + chr5_2:15443143-15443162 Msa0759690:intron 25.0%
!!! ATTGATTATTTTACCAGGTT+TGG + chr5_2:15443188-15443207 Msa0759690:intron 25.0%
! TTATCATAGTAAGAGAAAGA+GGG - chr5_2:15443504-15443523 None:intergenic 25.0%
! TCTCTTACTATGATAACTTA+AGG + chr5_2:15443508-15443527 Msa0759690:intron 25.0%
! CTCTTACTATGATAACTTAA+GGG + chr5_2:15443509-15443528 Msa0759690:intron 25.0%
! TCTTACTATGATAACTTAAG+GGG + chr5_2:15443510-15443529 Msa0759690:intron 25.0%
!!! GCAATTTTGAAGAGTTAATT+TGG + chr5_2:15443545-15443564 Msa0759690:intron 25.0%
! TGTTGAATAATGAATAACGA+AGG - chr5_2:15443587-15443606 None:intergenic 25.0%
!! ACCACTCATTTTAAATACTA+AGG + chr5_2:15443670-15443689 Msa0759690:intron 25.0%
!! CCACTCATTTTAAATACTAA+GGG + chr5_2:15443671-15443690 Msa0759690:intron 25.0%
! TAAGATTGAAAACTAATCCT+AGG + chr5_2:15443911-15443930 Msa0759690:intron 25.0%
! AAGATTGAAAACTAATCCTA+GGG + chr5_2:15443912-15443931 Msa0759690:intron 25.0%
!!! TATCACATTCTAGAATATCT+TGG - chr5_2:15443944-15443963 None:intergenic 25.0%
!! CATCAATTGATTTAATAGCT+GGG + chr5_2:15444492-15444511 Msa0759690:intron 25.0%
! GCAAGTATTAAAAAAGTGAT+TGG + chr5_2:15444526-15444545 Msa0759690:intron 25.0%
!!! TATGACTTCACTTTTATGAT+AGG + chr5_2:15444616-15444635 Msa0759690:intron 25.0%
! CAGTGAAATTATCAACAATA+AGG + chr5_2:15444721-15444740 Msa0759690:CDS 25.0%
! TGAAATTATCAACAATAAGG+AGG + chr5_2:15444724-15444743 Msa0759690:CDS 25.0%
TCAACAGATAGAAATGAAGA+TGG - chr5_2:15439312-15439331 None:intergenic 30.0%
GAATTGAAGTGAGAAAAAGA+AGG - chr5_2:15439335-15439354 None:intergenic 30.0%
! ATTGTTATTGTTATTACCGC+CGG - chr5_2:15439548-15439567 None:intergenic 30.0%
GGTAATAACAATAACAATGG+TGG + chr5_2:15439550-15439569 Msa0759690:CDS 30.0%
TGATAATTCAGAAAACAACC+CGG - chr5_2:15439836-15439855 None:intergenic 30.0%
!!! AGTGTAGAGAGTTTTTAGTT+AGG + chr5_2:15439896-15439915 Msa0759690:CDS 30.0%
! TAATCACTTGTTACACTGTT+TGG - chr5_2:15439943-15439962 None:intergenic 30.0%
! TTAGAGTATTCATTATGGAG+AGG + chr5_2:15439964-15439983 Msa0759690:CDS 30.0%
!! ATTAATTGGGTTCTGAAAGA+TGG + chr5_2:15440087-15440106 Msa0759690:CDS 30.0%
!! AAGATTTTGTTGTCGGATTT+CGG + chr5_2:15440126-15440145 Msa0759690:CDS 30.0%
! TTCTTTGATTCAGGTTATGA+TGG + chr5_2:15440296-15440315 Msa0759690:intron 30.0%
AACTGATATTGCAATGTGTT+TGG + chr5_2:15440359-15440378 Msa0759690:intron 30.0%
TCAAAATGAGATTCATTGGA+AGG + chr5_2:15440392-15440411 Msa0759690:intron 30.0%
!!! CACTTTTTTTTTTGTCGACA+TGG - chr5_2:15440520-15440539 None:intergenic 30.0%
CATGTCGACAAAAAAAAAAG+TGG + chr5_2:15440518-15440537 Msa0759690:intron 30.0%
TGGTTGACTACACTAAATTT+AGG + chr5_2:15440538-15440557 Msa0759690:intron 30.0%
ACTACACTAAATTTAGGTAG+TGG + chr5_2:15440544-15440563 Msa0759690:intron 30.0%
AAAACAACATTAAACAGGCT+CGG - chr5_2:15440763-15440782 None:intergenic 30.0%
! ATGAATGGTTTGAAACTCAA+GGG - chr5_2:15440884-15440903 None:intergenic 30.0%
AAAATACTCATGCAGATGAA+TGG - chr5_2:15440996-15441015 None:intergenic 30.0%
! TGCATGAGTATTTTCACATT+TGG + chr5_2:15441002-15441021 Msa0759690:intron 30.0%
ATTCACACTGCATATAAATG+AGG - chr5_2:15441278-15441297 None:intergenic 30.0%
!!! TAAGCTGATTTTGTTTTCAC+AGG + chr5_2:15441336-15441355 Msa0759690:intron 30.0%
TCTTCATCTACTAATACTAG+TGG + chr5_2:15441508-15441527 Msa0759690:intron 30.0%
GTTTCTAATGCTTGTATGTA+TGG + chr5_2:15441561-15441580 Msa0759690:intron 30.0%
! ATTTAAAGTCCGCAATTGAA+TGG - chr5_2:15441782-15441801 None:intergenic 30.0%
AACACAGCTTCAAGAAATTT+GGG - chr5_2:15441855-15441874 None:intergenic 30.0%
!!! ATGAAACAGAGGTTTTGTTT+GGG + chr5_2:15441913-15441932 Msa0759690:intron 30.0%
! CAAACTATTTAGGGTTTGTT+TGG - chr5_2:15442213-15442232 None:intergenic 30.0%
AACAAGAGTTATGGTTCAAT+TGG - chr5_2:15442260-15442279 None:intergenic 30.0%
CATATTGGAAACAAGAGTTA+TGG - chr5_2:15442269-15442288 None:intergenic 30.0%
! AAAGCACTTCTTATAACACT+TGG + chr5_2:15442302-15442321 Msa0759690:intron 30.0%
! AAATTCAAGATTCTCTAAGG+CGG - chr5_2:15442346-15442365 None:intergenic 30.0%
! TCATATAATTTTGTCTCTGG+TGG + chr5_2:15443011-15443030 Msa0759690:intron 30.0%
! CATATAATTTTGTCTCTGGT+GGG + chr5_2:15443012-15443031 Msa0759690:intron 30.0%
! GCAAAAGGTGCATTTAATAT+GGG - chr5_2:15443294-15443313 None:intergenic 30.0%
! TGCAAAAGGTGCATTTAATA+TGG - chr5_2:15443295-15443314 None:intergenic 30.0%
AAATTTCTAATCTGGAAGAC+AGG - chr5_2:15443383-15443402 None:intergenic 30.0%
GTTATCATAGTAAGAGAAAG+AGG - chr5_2:15443505-15443524 None:intergenic 30.0%
TGAATAATGAATAACGAAGG+TGG - chr5_2:15443584-15443603 None:intergenic 30.0%
ATTATTCAACACTGTTGTGA+AGG + chr5_2:15443596-15443615 Msa0759690:intron 30.0%
TGTCCAATAATTCCAAGATT+CGG - chr5_2:15443626-15443645 None:intergenic 30.0%
ATTATTGGACATGAAACATG+TGG + chr5_2:15443635-15443654 Msa0759690:intron 30.0%
TTATTGGACATGAAACATGT+GGG + chr5_2:15443636-15443655 Msa0759690:intron 30.0%
! CCCTTAGTATTTAAAATGAG+TGG - chr5_2:15443674-15443693 None:intergenic 30.0%
AACACTAATCCTAGATAAAC+AGG + chr5_2:15443788-15443807 Msa0759690:intron 30.0%
ACACTAATCCTAGATAAACA+GGG + chr5_2:15443789-15443808 Msa0759690:intron 30.0%
!!! TTTTTTGAAGAAGCAATCGT+AGG + chr5_2:15443869-15443888 Msa0759690:intron 30.0%
AGATTGAAAACTAATCCTAG+GGG + chr5_2:15443913-15443932 Msa0759690:intron 30.0%
TATTAGATTTCCTAACACTG+TGG + chr5_2:15443965-15443984 Msa0759690:intron 30.0%
ATTAGATTTCCTAACACTGT+GGG + chr5_2:15443966-15443985 Msa0759690:intron 30.0%
AGCTATATGAACATATGTCA+TGG + chr5_2:15444047-15444066 Msa0759690:intron 30.0%
TCAATCTAATACTTCCAAGA+AGG - chr5_2:15444163-15444182 None:intergenic 30.0%
!!! GGACACAACTTTTTTTCAAA+GGG + chr5_2:15444427-15444446 Msa0759690:intron 30.0%
!!! GACACAACTTTTTTTCAAAG+GGG + chr5_2:15444428-15444447 Msa0759690:intron 30.0%
!!! ACACAACTTTTTTTCAAAGG+GGG + chr5_2:15444429-15444448 Msa0759690:intron 30.0%
! GCATCAATTGATTTAATAGC+TGG + chr5_2:15444491-15444510 Msa0759690:intron 30.0%
!!! TTTTTTTGAAGGGAAGTGAT+TGG + chr5_2:15444553-15444572 Msa0759690:intron 30.0%
!! GTTGATAATTTCACTGAGTT+TGG - chr5_2:15444717-15444736 None:intergenic 30.0%
TTCAGGTCAACTATCTTTAT+TGG + chr5_2:15444990-15445009 Msa0759690:CDS 30.0%
!! GCAAATATCTCTAGAATATG+CGG + chr5_2:15445078-15445097 Msa0759690:CDS 30.0%
TTCAATCATGTTAGAGATGA+TGG + chr5_2:15445109-15445128 Msa0759690:CDS 30.0%
ATCAAATTATTGAAGCCACT+TGG + chr5_2:15445408-15445427 Msa0759690:three_prime_UTR 30.0%
TGCTGTATTTGTATCATTTG+TGG - chr5_2:15445710-15445729 None:intergenic 30.0%
TGTCAGTGTATGTGATTGAA+TGG - chr5_2:15439362-15439381 None:intergenic 35.0%
! GTTTAATGGACGAAAAAGAG+TGG - chr5_2:15439486-15439505 None:intergenic 35.0%
!! GTGAGAAAGGGTTAGTTTAA+TGG - chr5_2:15439500-15439519 None:intergenic 35.0%
GGCGGTAATAACAATAACAA+TGG + chr5_2:15439547-15439566 Msa0759690:CDS 35.0%
AACAATAACAATGGTGGTAG+TGG + chr5_2:15439556-15439575 Msa0759690:CDS 35.0%
ATGAATCGTCAGAGTCAAAA+GGG - chr5_2:15439603-15439622 None:intergenic 35.0%
! TTTGACTTCGTAAATGGGTT+GGG - chr5_2:15439752-15439771 None:intergenic 35.0%
TCAAAGGTGGAAACTTGATT+AGG + chr5_2:15439767-15439786 Msa0759690:CDS 35.0%
GATAATTCAGAAAACAACCC+GGG - chr5_2:15439835-15439854 None:intergenic 35.0%
TTGCTTTATGCTGTTGGATT+AGG + chr5_2:15440036-15440055 Msa0759690:CDS 35.0%
TGCTTTATGCTGTTGGATTA+GGG + chr5_2:15440037-15440056 Msa0759690:CDS 35.0%
TACTGCTGCTGCTATTAATT+GGG + chr5_2:15440074-15440093 Msa0759690:CDS 35.0%
!! AGATTTTGTTGTCGGATTTC+GGG + chr5_2:15440127-15440146 Msa0759690:CDS 35.0%
TTGATGTTAATCCTAAAGGG+TGG + chr5_2:15440157-15440176 Msa0759690:CDS 35.0%
ACAAACAAATGAGGAAAAGC+AGG - chr5_2:15440237-15440256 None:intergenic 35.0%
TGGTTCATAGTAGTGAACAT+GGG + chr5_2:15440564-15440583 Msa0759690:intron 35.0%
ATCTCTAGTGTTGTCTACAT+TGG - chr5_2:15440627-15440646 None:intergenic 35.0%
! GATGAATGGTTTGAAACTCA+AGG - chr5_2:15440885-15440904 None:intergenic 35.0%
TCAATACTCATGCAGATGAA+TGG - chr5_2:15440899-15440918 None:intergenic 35.0%
!! CATGAGTATTGAGTACAGAA+TGG + chr5_2:15440907-15440926 Msa0759690:intron 35.0%
GGTAGATATGTTAAACAGCA+TGG - chr5_2:15441112-15441131 None:intergenic 35.0%
AGAAAGACTACAGTGAAGTT+TGG - chr5_2:15441133-15441152 None:intergenic 35.0%
ATTGCTAAAGGTGAAGTTCA+AGG + chr5_2:15441619-15441638 Msa0759690:CDS 35.0%
TAAAGGTGAAGTTCAAGGAA+TGG + chr5_2:15441624-15441643 Msa0759690:CDS 35.0%
CAAAAAGAAGCAAGAACAAG+AGG - chr5_2:15441712-15441731 None:intergenic 35.0%
! TTCTTTTTGTGTCGTGACTT+GGG + chr5_2:15441723-15441742 Msa0759690:CDS 35.0%
ACTTTAGATTGCAGTACATG+TGG - chr5_2:15441750-15441769 None:intergenic 35.0%
TCAGAAGATACTTACTTGCA+CGG - chr5_2:15441810-15441829 None:intergenic 35.0%
GAACACAGCTTCAAGAAATT+TGG - chr5_2:15441856-15441875 None:intergenic 35.0%
!!! GATGAAACAGAGGTTTTGTT+TGG + chr5_2:15441912-15441931 Msa0759690:intron 35.0%
!!! TTTTTTTGAGTTCCCCGAAT+CGG + chr5_2:15442081-15442100 Msa0759690:intron 35.0%
TTAAAATCCGGACTGCATAT+TGG - chr5_2:15442284-15442303 None:intergenic 35.0%
ATGGATCAAAAATGCAGAAC+CGG - chr5_2:15442542-15442561 None:intergenic 35.0%
AAAAATCTTCACCGCAAACA+GGG - chr5_2:15442579-15442598 None:intergenic 35.0%
AAAAAATCTTCACCGCAAAC+AGG - chr5_2:15442580-15442599 None:intergenic 35.0%
! TTACGATGTTTCTATACCCA+TGG + chr5_2:15443053-15443072 Msa0759690:intron 35.0%
TTAATCAATTGTTGGAGGAC+TGG + chr5_2:15443100-15443119 Msa0759690:intron 35.0%
GAGATCTAGAAATGCTTCTA+GGG + chr5_2:15443122-15443141 Msa0759690:intron 35.0%
TATTCACTGAAAACCAAACC+TGG - chr5_2:15443204-15443223 None:intergenic 35.0%
TTCAGTGAATATCTACTGAG+TGG + chr5_2:15443213-15443232 Msa0759690:CDS 35.0%
! CAACTCACTTTGTTTGCAAA+AGG - chr5_2:15443309-15443328 None:intergenic 35.0%
ACTATGATAACTTAAGGGGA+AGG + chr5_2:15443514-15443533 Msa0759690:intron 35.0%
CTATGATAACTTAAGGGGAA+GGG + chr5_2:15443515-15443534 Msa0759690:intron 35.0%
AGGAAGTAATTGTAGATAGG+GGG - chr5_2:15444200-15444219 None:intergenic 35.0%
GAGGAAGTAATTGTAGATAG+GGG - chr5_2:15444201-15444220 None:intergenic 35.0%
GGAGGAAGTAATTGTAGATA+GGG - chr5_2:15444202-15444221 None:intergenic 35.0%
TGGAGGAAGTAATTGTAGAT+AGG - chr5_2:15444203-15444222 None:intergenic 35.0%
AAAGAGCTTATGAAAAGCGA+TGG - chr5_2:15444223-15444242 None:intergenic 35.0%
! GTATTAATAAGGGGTGTGTT+TGG + chr5_2:15444356-15444375 Msa0759690:intron 35.0%
! ATGCACCTAGTAATTTGCAT+AGG + chr5_2:15444391-15444410 Msa0759690:intron 35.0%
! TGCACCTAGTAATTTGCATA+GGG + chr5_2:15444392-15444411 Msa0759690:intron 35.0%
!!! GGGACACAACTTTTTTTCAA+AGG + chr5_2:15444426-15444445 Msa0759690:intron 35.0%
TAACATGTTCGTGATGATTC+AGG + chr5_2:15444919-15444938 Msa0759690:intron 35.0%
! TAAAGAAACTTGTTCACAGC+TGG + chr5_2:15444949-15444968 Msa0759690:CDS 35.0%
!! TATCTCTAGAATATGCGGAA+AGG + chr5_2:15445083-15445102 Msa0759690:CDS 35.0%
!! ATCTCTAGAATATGCGGAAA+GGG + chr5_2:15445084-15445103 Msa0759690:CDS 35.0%
TGAGTTTCTGATATGGTGAA+TGG + chr5_2:15445208-15445227 Msa0759690:exon 35.0%
! TCAAGATGTTGAGGTATTCA+AGG + chr5_2:15445295-15445314 Msa0759690:three_prime_UTR 35.0%
! CAAGATGTTGAGGTATTCAA+GGG + chr5_2:15445296-15445315 Msa0759690:three_prime_UTR 35.0%
AAATTATTGAAGCCACTTGG+TGG + chr5_2:15445411-15445430 Msa0759690:three_prime_UTR 35.0%
TTGACAAAAGACAGGTGAAT+TGG - chr5_2:15445463-15445482 None:intergenic 35.0%
CCAATTATTTGACCCTTTCT+GGG - chr5_2:15445504-15445523 None:intergenic 35.0%
CCAGAAAGGGTCAAATAATT+GGG + chr5_2:15445502-15445521 Msa0759690:three_prime_UTR 35.0%
! TTTTCGTTCGACACTTAGTT+TGG + chr5_2:15445559-15445578 Msa0759690:three_prime_UTR 35.0%
! TTATGCAGAGGTGATTGTTT+TGG - chr5_2:15445794-15445813 None:intergenic 35.0%
AAACAATCACCTCTGCATAA+AGG + chr5_2:15445794-15445813 Msa0759690:three_prime_UTR 35.0%
! GAAGATGGCATTGAAATCTC+AGG - chr5_2:15439297-15439316 None:intergenic 40.0%
AAGGCGAAAAGAGTGAGAAA+GGG - chr5_2:15439512-15439531 None:intergenic 40.0%
AAAGGCGAAAAGAGTGAGAA+AGG - chr5_2:15439513-15439532 None:intergenic 40.0%
! TTATTGTTATTACCGCCGGT+GGG - chr5_2:15439544-15439563 None:intergenic 40.0%
!! AATAACAATGGTGGTAGTGG+TGG + chr5_2:15439559-15439578 Msa0759690:CDS 40.0%
GATGAATCGTCAGAGTCAAA+AGG - chr5_2:15439604-15439623 None:intergenic 40.0%
!!! TTGTTTTTGCCAACTCGCAA+TGG + chr5_2:15439687-15439706 Msa0759690:CDS 40.0%
! CTTTGACTTCGTAAATGGGT+TGG - chr5_2:15439753-15439772 None:intergenic 40.0%
CAACCCATTTACGAAGTCAA+AGG + chr5_2:15439751-15439770 Msa0759690:CDS 40.0%
! CCACCTTTGACTTCGTAAAT+GGG - chr5_2:15439757-15439776 None:intergenic 40.0%
! TCCACCTTTGACTTCGTAAA+TGG - chr5_2:15439758-15439777 None:intergenic 40.0%
! ATTTTCATTGCGTCGAATCC+CGG + chr5_2:15439814-15439833 Msa0759690:CDS 40.0%
ACACTGTTTGGAAAACCTTC+AGG - chr5_2:15439931-15439950 None:intergenic 40.0%
!! TCATTATGGAGAGGTGTTCA+AGG + chr5_2:15439973-15439992 Msa0759690:CDS 40.0%
CAAGCTTTGCTTTATGCTGT+TGG + chr5_2:15440030-15440049 Msa0759690:CDS 40.0%
! TATGCTGTTGGATTAGGGAA+AGG + chr5_2:15440042-15440061 Msa0759690:CDS 40.0%
! ATGCTGTTGGATTAGGGAAA+GGG + chr5_2:15440043-15440062 Msa0759690:CDS 40.0%
CAATTAATAGCAGCAGCAGT+AGG - chr5_2:15440075-15440094 None:intergenic 40.0%
CTACTGCTGCTGCTATTAAT+TGG + chr5_2:15440073-15440092 Msa0759690:CDS 40.0%
!! TGGGTTCTGAAAGATGGAAT+TGG + chr5_2:15440093-15440112 Msa0759690:CDS 40.0%
!! GGGTTCTGAAAGATGGAATT+GGG + chr5_2:15440094-15440113 Msa0759690:CDS 40.0%
TTCTTGAAAATGCCGCGTTT+GGG + chr5_2:15440196-15440215 Msa0759690:CDS 40.0%
CCAATAGGCACAAACAAATG+AGG - chr5_2:15440246-15440265 None:intergenic 40.0%
CCTCATTTGTTTGTGCCTAT+TGG + chr5_2:15440243-15440262 Msa0759690:CDS 40.0%
GTGGTTCATAGTAGTGAACA+TGG + chr5_2:15440563-15440582 Msa0759690:intron 40.0%
TGAACATGGGTTCACCATAA+TGG + chr5_2:15440577-15440596 Msa0759690:intron 40.0%
CATCGAATCCTAGTCCATTA+TGG - chr5_2:15440594-15440613 None:intergenic 40.0%
CAACTCAATGGTTCCTTAAC+AGG - chr5_2:15440849-15440868 None:intergenic 40.0%
!! TAAGGAACCATTGAGTTGAG+TGG + chr5_2:15440851-15440870 Msa0759690:intron 40.0%
ACATGAAATACTCTCCTGTG+TGG + chr5_2:15441174-15441193 Msa0759690:intron 40.0%
AAATACTCTCCTGTGTGGTT+GGG + chr5_2:15441179-15441198 Msa0759690:intron 40.0%
! TGTTTTCACAGGCTTCTACT+AGG + chr5_2:15441347-15441366 Msa0759690:intron 40.0%
!! ACTAGGAGTTGTTTCTTTGC+CGG + chr5_2:15441364-15441383 Msa0759690:CDS 40.0%
! TGCTCAAAGGAATTTTGCTG+AGG + chr5_2:15441393-15441412 Msa0759690:CDS 40.0%
GTCAGCAGGTTTATTGGTAT+CGG + chr5_2:15441646-15441665 Msa0759690:CDS 40.0%
TCAGCAGGTTTATTGGTATC+GGG + chr5_2:15441647-15441666 Msa0759690:CDS 40.0%
! CTTCTTTTTGTGTCGTGACT+TGG + chr5_2:15441722-15441741 Msa0759690:CDS 40.0%
CTTACCAGTCCATTCAATTG+CGG + chr5_2:15441770-15441789 Msa0759690:CDS 40.0%
AGATACTTACTTGCACGGTA+AGG - chr5_2:15441805-15441824 None:intergenic 40.0%
TTATACCGGTGATGAAACAG+AGG + chr5_2:15441902-15441921 Msa0759690:intron 40.0%
CAAAACCTCTGTTTCATCAC+CGG - chr5_2:15441910-15441929 None:intergenic 40.0%
!!! AGAGGTTTTGTTTGGGAGTT+GGG + chr5_2:15441920-15441939 Msa0759690:intron 40.0%
!!! TTTTTTGAGTTCCCCGAATC+GGG + chr5_2:15442082-15442101 Msa0759690:intron 40.0%
CTTGTTTCCAATATGCAGTC+CGG + chr5_2:15442274-15442293 Msa0759690:intron 40.0%
TGGAGCAGTGCAAAAATTGT+TGG + chr5_2:15442461-15442480 Msa0759690:intron 40.0%
AGCAGTGCAAAAATTGTTGG+AGG + chr5_2:15442464-15442483 Msa0759690:intron 40.0%
GCAGTGCAAAAATTGTTGGA+GGG + chr5_2:15442465-15442484 Msa0759690:intron 40.0%
AAAGGTAGATCGTGAAATCG+TGG + chr5_2:15442496-15442515 Msa0759690:intron 40.0%
AAGGTAGATCGTGAAATCGT+GGG + chr5_2:15442497-15442516 Msa0759690:intron 40.0%
TATTATTCACTCTGCGCGAA+AGG - chr5_2:15442667-15442686 None:intergenic 40.0%
GGAGATCTAGAAATGCTTCT+AGG + chr5_2:15443121-15443140 Msa0759690:intron 40.0%
! GCATTTAATATGGGTACTGC+TGG - chr5_2:15443285-15443304 None:intergenic 40.0%
AATATCTCTTTGGGCTCTTG+AGG + chr5_2:15443448-15443467 Msa0759690:intron 40.0%
ATTCAACACTGTTGTGAAGG+TGG + chr5_2:15443599-15443618 Msa0759690:intron 40.0%
GGACCGAATCTTGGAATTAT+TGG + chr5_2:15443620-15443639 Msa0759690:intron 40.0%
AATATCTTGGTTTAGCCCCT+AGG - chr5_2:15443931-15443950 None:intergenic 40.0%
GTATTAGATTGAAGCCATGC+AGG + chr5_2:15444171-15444190 Msa0759690:intron 40.0%
! GCACCTAGTAATTTGCATAG+GGG + chr5_2:15444393-15444412 Msa0759690:intron 40.0%
ATGCCCCTATGCAAATTACT+AGG - chr5_2:15444399-15444418 None:intergenic 40.0%
!! TTGCATAGGGGCATTTATTC+AGG + chr5_2:15444405-15444424 Msa0759690:intron 40.0%
!! TGCATAGGGGCATTTATTCA+GGG + chr5_2:15444406-15444425 Msa0759690:intron 40.0%
! CAAAGGGGGCCTTATAATTA+CGG + chr5_2:15444443-15444462 Msa0759690:intron 40.0%
GCCTTATAATTACGGACAGA+GGG + chr5_2:15444451-15444470 Msa0759690:intron 40.0%
TCCCTCTGTCCGTAATTATA+AGG - chr5_2:15444455-15444474 None:intergenic 40.0%
TGATTTAATAGCTGGGCACA+AGG + chr5_2:15444499-15444518 Msa0759690:intron 40.0%
GATTTAATAGCTGGGCACAA+GGG + chr5_2:15444500-15444519 Msa0759690:intron 40.0%
CTACATCTTGTCTGAGAACA+CGG + chr5_2:15444784-15444803 Msa0759690:CDS 40.0%
TACATCTTGTCTGAGAACAC+GGG + chr5_2:15444785-15444804 Msa0759690:CDS 40.0%
!! TATGCTCAAGGCATTGTTTC+AGG + chr5_2:15444973-15444992 Msa0759690:CDS 40.0%
! TATTGGTTAGAGAAGAACGC+AGG + chr5_2:15445007-15445026 Msa0759690:CDS 40.0%
ACCAGGTTTGCAGTCATAAA+GGG - chr5_2:15445050-15445069 None:intergenic 40.0%
!! AGAGATGATGGAGAATCAGT+TGG + chr5_2:15445121-15445140 Msa0759690:CDS 40.0%
! ATGATGGAGAATCAGTTGGT+TGG + chr5_2:15445125-15445144 Msa0759690:CDS 40.0%
CATGGAGTGAGTTTCTGATA+TGG + chr5_2:15445201-15445220 Msa0759690:exon 40.0%
AAAAACAATGCAGCAGCAAG+TGG - chr5_2:15445255-15445274 None:intergenic 40.0%
TTGAATCAACCTGGATTCCT+CGG - chr5_2:15445279-15445298 None:intergenic 40.0%
CTCAACATCTTGAATCAACC+TGG - chr5_2:15445288-15445307 None:intergenic 40.0%
!! CAGGTTGATTCAAGATGTTG+AGG + chr5_2:15445286-15445305 Msa0759690:three_prime_UTR 40.0%
!! AGGTATTCAAGGGCATTGAT+TGG + chr5_2:15445306-15445325 Msa0759690:three_prime_UTR 40.0%
CTGTTGAAGATTGCATTCCA+TGG + chr5_2:15445342-15445361 Msa0759690:three_prime_UTR 40.0%
! AGACAGGTGAATTGGCATTT+TGG - chr5_2:15445455-15445474 None:intergenic 40.0%
! CTTTTGTCAACGTCAGTGAA+TGG + chr5_2:15445473-15445492 Msa0759690:three_prime_UTR 40.0%
TTATTTGACCCTTTCTGGGT+CGG - chr5_2:15445500-15445519 None:intergenic 40.0%
CCCAGAAAGGGTCAAATAAT+TGG + chr5_2:15445501-15445520 Msa0759690:three_prime_UTR 40.0%
CCCAATTATTTGACCCTTTC+TGG - chr5_2:15445505-15445524 None:intergenic 40.0%
!!! TGTTTTGGCTTCAACAACAC+AGG - chr5_2:15445779-15445798 None:intergenic 40.0%
GAAAGAGGAAGTTGCAGTTC+AGG + chr5_2:15439270-15439289 Msa0759690:CDS 45.0%
TACACTGACAGTGCACAACA+TGG + chr5_2:15439372-15439391 Msa0759690:CDS 45.0%
ACACTGACAGTGCACAACAT+GGG + chr5_2:15439373-15439392 Msa0759690:CDS 45.0%
CGAAAAAGAGTGGAAAGTGG+TGG - chr5_2:15439476-15439495 None:intergenic 45.0%
GGACGAAAAAGAGTGGAAAG+TGG - chr5_2:15439479-15439498 None:intergenic 45.0%
! GTTATTGTTATTACCGCCGG+TGG - chr5_2:15439545-15439564 None:intergenic 45.0%
!! TGGTAGTGGTGGTGATTCAT+GGG + chr5_2:15439570-15439589 Msa0759690:CDS 45.0%
!!! GGTTTTTTGCCATTGCGAGT+TGG - chr5_2:15439699-15439718 None:intergenic 45.0%
CCCATTTACGAAGTCAAAGG+TGG + chr5_2:15439754-15439773 Msa0759690:CDS 45.0%
! TTTTCATTGCGTCGAATCCC+GGG + chr5_2:15439815-15439834 Msa0759690:CDS 45.0%
!! GTTAGGTTGATGCTACCTGA+AGG + chr5_2:15439913-15439932 Msa0759690:CDS 45.0%
!! TGTTCAAGGTGTTGCTTGTC+AGG + chr5_2:15439987-15440006 Msa0759690:CDS 45.0%
! TGCTGTTGGATTAGGGAAAG+GGG + chr5_2:15440044-15440063 Msa0759690:CDS 45.0%
!! TTTTGTTGTCGGATTTCGGG+AGG + chr5_2:15440130-15440149 Msa0759690:CDS 45.0%
GCAAACAATCTCCACCCTTT+AGG - chr5_2:15440171-15440190 None:intergenic 45.0%
CTTCTTGAAAATGCCGCGTT+TGG + chr5_2:15440195-15440214 Msa0759690:CDS 45.0%
! TTTTGCTGGTGCTTCTCGAT+CGG + chr5_2:15440269-15440288 Msa0759690:CDS 45.0%
ATCGGCTGCTTCTTTGATTC+AGG + chr5_2:15440287-15440306 Msa0759690:CDS 45.0%
!! TGGGTTCACCATAATGGACT+AGG + chr5_2:15440583-15440602 Msa0759690:intron 45.0%
! GGCTCGGTTGACTATTCAAA+TGG - chr5_2:15440747-15440766 None:intergenic 45.0%
!! ACCATTGAGTTGAGTGGTCT+TGG + chr5_2:15440857-15440876 Msa0759690:intron 45.0%
ACCAAGACCACTCAACTCAA+TGG - chr5_2:15440861-15440880 None:intergenic 45.0%
GAAATACTCTCCTGTGTGGT+TGG + chr5_2:15441178-15441197 Msa0759690:intron 45.0%
AATACTCTCCTGTGTGGTTG+GGG + chr5_2:15441180-15441199 Msa0759690:intron 45.0%
ATTCCTTTGAGCAGCGAAAC+CGG - chr5_2:15441386-15441405 None:intergenic 45.0%
AAGTTCAAGGAATGGTCAGC+AGG + chr5_2:15441632-15441651 Msa0759690:CDS 45.0%
GGAATGGTCAGCAGGTTTAT+TGG + chr5_2:15441640-15441659 Msa0759690:CDS 45.0%
! AGGTTTATTGGTATCGGGCT+TGG + chr5_2:15441652-15441671 Msa0759690:CDS 45.0%
! ATTGGTATCGGGCTTGGTAT+AGG + chr5_2:15441658-15441677 Msa0759690:CDS 45.0%
AAGTCCGCAATTGAATGGAC+TGG - chr5_2:15441777-15441796 None:intergenic 45.0%
!!! CAGAGGTTTTGTTTGGGAGT+TGG + chr5_2:15441919-15441938 Msa0759690:intron 45.0%
!!! GAGGTTTTGTTTGGGAGTTG+GGG + chr5_2:15441921-15441940 Msa0759690:intron 45.0%
!!! AGGTTTTGTTTGGGAGTTGG+GGG + chr5_2:15441922-15441941 Msa0759690:intron 45.0%
GGGGAAGAAATGAGTGCTTT+GGG + chr5_2:15441941-15441960 Msa0759690:intron 45.0%
GGGAAGAAATGAGTGCTTTG+GGG + chr5_2:15441942-15441961 Msa0759690:intron 45.0%
!! AAGAAATGAGTGCTTTGGGG+TGG + chr5_2:15441945-15441964 Msa0759690:intron 45.0%
TAATAAGGGGAGGACTTTGC+AGG - chr5_2:15442060-15442079 None:intergenic 45.0%
AGAACCAAAACCTCCCGATT+CGG - chr5_2:15442098-15442117 None:intergenic 45.0%
AGGGACGACATAATGCATAG+GGG - chr5_2:15442136-15442155 None:intergenic 45.0%
GAGGGACGACATAATGCATA+GGG - chr5_2:15442137-15442156 None:intergenic 45.0%
AGAGGGACGACATAATGCAT+AGG - chr5_2:15442138-15442157 None:intergenic 45.0%
TTGTTTGGCAGTGAGAGACT+GGG - chr5_2:15442198-15442217 None:intergenic 45.0%
TTTGTTTGGCAGTGAGAGAC+TGG - chr5_2:15442199-15442218 None:intergenic 45.0%
TTCTTCTCCATCAACCATGC+TGG + chr5_2:15442441-15442460 Msa0759690:intron 45.0%
! ATTTTTGCACTGCTCCAGCA+TGG - chr5_2:15442458-15442477 None:intergenic 45.0%
GTGCAAAAATTGTTGGAGGG+CGG + chr5_2:15442468-15442487 Msa0759690:intron 45.0%
CAGGGTTAAAACGGGTCATA+TGG - chr5_2:15442561-15442580 None:intergenic 45.0%
!! ACCCGTTTTAACCCTGTTTG+CGG + chr5_2:15442565-15442584 Msa0759690:intron 45.0%
ACCGCAAACAGGGTTAAAAC+GGG - chr5_2:15442569-15442588 None:intergenic 45.0%
CACCGCAAACAGGGTTAAAA+CGG - chr5_2:15442570-15442589 None:intergenic 45.0%
!! TTCTAAGACTGCTGCACCAT+GGG - chr5_2:15443072-15443091 None:intergenic 45.0%
!! TTTCTAAGACTGCTGCACCA+TGG - chr5_2:15443073-15443092 None:intergenic 45.0%
TGAATATCTACTGAGTGGCC+AGG + chr5_2:15443218-15443237 Msa0759690:CDS 45.0%
! ATGGGTACTGCTGGAAATAG+CGG - chr5_2:15443276-15443295 None:intergenic 45.0%
CCTGATCTCCCTGTTTATCT+AGG - chr5_2:15443800-15443819 None:intergenic 45.0%
CCTAGATAAACAGGGAGATC+AGG + chr5_2:15443797-15443816 Msa0759690:intron 45.0%
AGATTTCCTAACACTGTGGG+AGG + chr5_2:15443969-15443988 Msa0759690:intron 45.0%
GATTTCCTAACACTGTGGGA+GGG + chr5_2:15443970-15443989 Msa0759690:intron 45.0%
ATTTCCTAACACTGTGGGAG+GGG + chr5_2:15443971-15443990 Msa0759690:intron 45.0%
! AGAAGGATACACGAGGGTTT+TGG - chr5_2:15444146-15444165 None:intergenic 45.0%
AAACCCTCGTGTATCCTTCT+TGG + chr5_2:15444146-15444165 Msa0759690:intron 45.0%
CTTCCAAGAAGGATACACGA+GGG - chr5_2:15444152-15444171 None:intergenic 45.0%
ACTTCCAAGAAGGATACACG+AGG - chr5_2:15444153-15444172 None:intergenic 45.0%
GAGCTTATGAAAAGCGATGG+AGG - chr5_2:15444220-15444239 None:intergenic 45.0%
! GGCCTTATAATTACGGACAG+AGG + chr5_2:15444450-15444469 Msa0759690:intron 45.0%
CATGTTCGTGATGATTCAGG+TGG + chr5_2:15444922-15444941 Msa0759690:intron 45.0%
TTCACAGCTGGATATGCTCA+AGG + chr5_2:15444961-15444980 Msa0759690:CDS 45.0%
GAGAAGAACGCAGGAATTGA+AGG + chr5_2:15445016-15445035 Msa0759690:CDS 45.0%
AACGCAGGAATTGAAGGTAG+AGG + chr5_2:15445022-15445041 Msa0759690:CDS 45.0%
ACCCTTTATGACTGCAAACC+TGG + chr5_2:15445046-15445065 Msa0759690:CDS 45.0%
CACCAGGTTTGCAGTCATAA+AGG - chr5_2:15445051-15445070 None:intergenic 45.0%
CTTTATGACTGCAAACCTGG+TGG + chr5_2:15445049-15445068 Msa0759690:CDS 45.0%
TCAGTTGGTTGGATCACAGA+CGG + chr5_2:15445136-15445155 Msa0759690:CDS 45.0%
TTGCAAGGCCTTTGCCTAAT+AGG + chr5_2:15445164-15445183 Msa0759690:CDS 45.0%
GAAACTCACTCCATGTTTCC+TGG - chr5_2:15445196-15445215 None:intergenic 45.0%
!! TTGTTTTTCCCGAGGAATCC+AGG + chr5_2:15445267-15445286 Msa0759690:three_prime_UTR 45.0%
TGAATCAACCTGGATTCCTC+GGG - chr5_2:15445278-15445297 None:intergenic 45.0%
ATGCAACTCTGCTGGTGTAA+TGG + chr5_2:15445373-15445392 Msa0759690:three_prime_UTR 45.0%
!! GTTTTAGTCACACCACCAAG+TGG - chr5_2:15445426-15445445 None:intergenic 45.0%
CACTGACGTTGACAAAAGAC+AGG - chr5_2:15445471-15445490 None:intergenic 45.0%
ACCTCTGCATAAAGGCTAGT+AGG + chr5_2:15445802-15445821 Msa0759690:three_prime_UTR 45.0%
!!! AAATCATTTTAAAAAAAAAA+GGG - chr5_2:15442793-15442812 None:intergenic 5.0%
!! TATAAAATTATATGATTAAA+TGG - chr5_2:15442946-15442965 None:intergenic 5.0%
AAGAGGAGGAAGAAGGGAAG+CGG - chr5_2:15439413-15439432 None:intergenic 50.0%
GAGGTGAAGAGGAGGAAGAA+GGG - chr5_2:15439419-15439438 None:intergenic 50.0%
AAAGAGTGGAAAGTGGTGGC+CGG - chr5_2:15439472-15439491 None:intergenic 50.0%
!! GTGGTAGTGGTGGTGATTCA+TGG + chr5_2:15439569-15439588 Msa0759690:CDS 50.0%
! GGTAGTGGTGGTGATTCATG+GGG + chr5_2:15439571-15439590 Msa0759690:CDS 50.0%
TTGTCAGGTGAGTGGAGTGT+TGG + chr5_2:15440002-15440021 Msa0759690:CDS 50.0%
TGAAAATGCCGCGTTTGGGT+TGG + chr5_2:15440200-15440219 Msa0759690:CDS 50.0%
ACACATCTCCAACCCAAACG+CGG - chr5_2:15440211-15440230 None:intergenic 50.0%
!! GTGCCTATTGGTGCTTTTGC+TGG + chr5_2:15440255-15440274 Msa0759690:CDS 50.0%
!! GCACCAGCAAAAGCACCAAT+AGG - chr5_2:15440261-15440280 None:intergenic 50.0%
! TATCGGGCTTGGTATAGGAC+TGG + chr5_2:15441663-15441682 Msa0759690:CDS 50.0%
! ATCGGGCTTGGTATAGGACT+GGG + chr5_2:15441664-15441683 Msa0759690:CDS 50.0%
ATAGGACTGGGCAACTGCAT+AGG + chr5_2:15441676-15441695 Msa0759690:CDS 50.0%
AGAAGCAAGAACAAGAGGCG+TGG - chr5_2:15441707-15441726 None:intergenic 50.0%
GGGGGAAGAAATGAGTGCTT+TGG + chr5_2:15441940-15441959 Msa0759690:intron 50.0%
! AACCAAAACCTCCCGATTCG+GGG - chr5_2:15442096-15442115 None:intergenic 50.0%
GAACCAAAACCTCCCGATTC+GGG - chr5_2:15442097-15442116 None:intergenic 50.0%
AGGAGGAAAGAGAAGGCAGA+GGG - chr5_2:15442155-15442174 None:intergenic 50.0%
GAAAGGGAGGAGGAAAGAGA+AGG - chr5_2:15442162-15442181 None:intergenic 50.0%
GATTTGAGGAGAAAGGGAGG+AGG - chr5_2:15442172-15442191 None:intergenic 50.0%
AGGGATTTGAGGAGAAAGGG+AGG - chr5_2:15442175-15442194 None:intergenic 50.0%
GGGAGGGATTTGAGGAGAAA+GGG - chr5_2:15442178-15442197 None:intergenic 50.0%
TGGGAGGGATTTGAGGAGAA+AGG - chr5_2:15442179-15442198 None:intergenic 50.0%
TAAGGCGGCCAAGTGTTCTA+AGG - chr5_2:15442331-15442350 None:intergenic 50.0%
GGTTGCAATTGTGCAGCACA+TGG + chr5_2:15442372-15442391 Msa0759690:intron 50.0%
GCACATGGTTGTTAAGCGTG+TGG + chr5_2:15442387-15442406 Msa0759690:intron 50.0%
AGCAGCGATTTATCTCGCAC+CGG + chr5_2:15442520-15442539 Msa0759690:intron 50.0%
!! GCTGCAAAGCAGGTCGTTTT+GGG - chr5_2:15442605-15442624 None:intergenic 50.0%
! TGCTGCAAAGCAGGTCGTTT+TGG - chr5_2:15442606-15442625 None:intergenic 50.0%
CCATGTATGTGCTGCAAAGC+AGG - chr5_2:15442615-15442634 None:intergenic 50.0%
CCTGCTTTGCAGCACATACA+TGG + chr5_2:15442612-15442631 Msa0759690:intron 50.0%
TGTGAAGGTGGACCGAATCT+TGG + chr5_2:15443611-15443630 Msa0759690:intron 50.0%
TTTCCTAACACTGTGGGAGG+GGG + chr5_2:15443972-15443991 Msa0759690:intron 50.0%
!!! GGTTTTGGAGGGAAGGGTTT+GGG - chr5_2:15444131-15444150 None:intergenic 50.0%
!!! GGATACACGAGGGTTTTGGA+GGG - chr5_2:15444142-15444161 None:intergenic 50.0%
!! AGGATACACGAGGGTTTTGG+AGG - chr5_2:15444143-15444162 None:intergenic 50.0%
TTAATAGCTGGGCACAAGGG+TGG + chr5_2:15444503-15444522 Msa0759690:intron 50.0%
TAATAGCTGGGCACAAGGGT+GGG + chr5_2:15444504-15444523 Msa0759690:intron 50.0%
ATTGAAAGCCGTCTGCAGCT+TGG + chr5_2:15444689-15444708 Msa0759690:CDS 50.0%
GTTTGGATCCAAGCTGCAGA+CGG - chr5_2:15444700-15444719 None:intergenic 50.0%
ATGACTGCAAACCTGGTGGT+AGG + chr5_2:15445053-15445072 Msa0759690:CDS 50.0%
GATATTTGCAGCCTACCACC+AGG - chr5_2:15445067-15445086 None:intergenic 50.0%
CAGTTGGTTGGATCACAGAC+GGG + chr5_2:15445137-15445156 Msa0759690:CDS 50.0%
! TCACAGACGGGCTTATTGCA+AGG + chr5_2:15445149-15445168 Msa0759690:CDS 50.0%
GGCCTTTGCCTAATAGGTGT+CGG + chr5_2:15445170-15445189 Msa0759690:CDS 50.0%
TTTCCTGGCCGACACCTATT+AGG - chr5_2:15445181-15445200 None:intergenic 50.0%
CTGATATGGTGAATGGCTGC+TGG + chr5_2:15445215-15445234 Msa0759690:three_prime_UTR 50.0%
!! CTGCTGCATTGTTTTTCCCG+AGG + chr5_2:15445259-15445278 Msa0759690:three_prime_UTR 50.0%
GAGTTGCATGCTTTGCACCA+TGG - chr5_2:15445362-15445381 None:intergenic 50.0%
TGCAAAGCATGCAACTCTGC+TGG + chr5_2:15445365-15445384 Msa0759690:three_prime_UTR 50.0%
AACTCTGCTGGTGTAATGGC+TGG + chr5_2:15445377-15445396 Msa0759690:three_prime_UTR 50.0%
TGAATGGACCGACCCAGAAA+GGG + chr5_2:15445489-15445508 Msa0759690:three_prime_UTR 50.0%
!! GCCTACTAGCCTTTATGCAG+AGG - chr5_2:15445806-15445825 None:intergenic 50.0%
GGAGGTGAAGAGGAGGAAGA+AGG - chr5_2:15439420-15439439 None:intergenic 55.0%
AAGTGGTGGCCGGGAAATGT+GGG - chr5_2:15439462-15439481 None:intergenic 55.0%
AAAGTGGTGGCCGGGAAATG+TGG - chr5_2:15439463-15439482 None:intergenic 55.0%
AAGAGTGGAAAGTGGTGGCC+GGG - chr5_2:15439471-15439490 None:intergenic 55.0%
GTTATTACCGCCGGTGGGAA+GGG - chr5_2:15439539-15439558 None:intergenic 55.0%
TGTTATTACCGCCGGTGGGA+AGG - chr5_2:15439540-15439559 None:intergenic 55.0%
!! GGTGTTGCTTGTCAGGTGAG+TGG + chr5_2:15439994-15440013 Msa0759690:CDS 55.0%
!! TTGCCGGTTTCGCTGCTCAA+AGG + chr5_2:15441380-15441399 Msa0759690:CDS 55.0%
!! AGTGCTTTGGGGTGGAGAGT+GGG + chr5_2:15441953-15441972 Msa0759690:intron 55.0%
! TTTGAGTTCCCCGAATCGGG+AGG + chr5_2:15442085-15442104 Msa0759690:intron 55.0%
! TTCCCCGAATCGGGAGGTTT+TGG + chr5_2:15442091-15442110 Msa0759690:intron 55.0%
GAGGAGGAAAGAGAAGGCAG+AGG - chr5_2:15442156-15442175 None:intergenic 55.0%
GAGAGACTGGGAGGGATTTG+AGG - chr5_2:15442186-15442205 None:intergenic 55.0%
TTGGCAGTGAGAGACTGGGA+GGG - chr5_2:15442194-15442213 None:intergenic 55.0%
TTTGGCAGTGAGAGACTGGG+AGG - chr5_2:15442195-15442214 None:intergenic 55.0%
CTTGGCCGCCTTAGAACACT+TGG + chr5_2:15442320-15442339 Msa0759690:intron 55.0%
CACTGCTCCAGCATGGTTGA+TGG - chr5_2:15442451-15442470 None:intergenic 55.0%
TGCTGGAAATAGCGGCTCCT+CGG - chr5_2:15443268-15443287 None:intergenic 55.0%
TCTCTTTGGGCTCTTGAGGC+TGG + chr5_2:15443452-15443471 Msa0759690:intron 55.0%
CTCTTTGGGCTCTTGAGGCT+GGG + chr5_2:15443453-15443472 Msa0759690:intron 55.0%
TCTTTGGGCTCTTGAGGCTG+GGG + chr5_2:15443454-15443473 Msa0759690:intron 55.0%
TTCCTAACACTGTGGGAGGG+GGG + chr5_2:15443973-15443992 Msa0759690:intron 55.0%
TTGGAGGGAAGGGTTTGGGA+GGG - chr5_2:15444127-15444146 None:intergenic 55.0%
TTTGGAGGGAAGGGTTTGGG+AGG - chr5_2:15444128-15444147 None:intergenic 55.0%
!!! GGGTTTTGGAGGGAAGGGTT+TGG - chr5_2:15444132-15444151 None:intergenic 55.0%
!!! CACGAGGGTTTTGGAGGGAA+GGG - chr5_2:15444137-15444156 None:intergenic 55.0%
!!! ACACGAGGGTTTTGGAGGGA+AGG - chr5_2:15444138-15444157 None:intergenic 55.0%
!! TAGATAGGGGGTGTCCTGCA+TGG - chr5_2:15444188-15444207 None:intergenic 55.0%
GGCCGACACCTATTAGGCAA+AGG - chr5_2:15445175-15445194 None:intergenic 55.0%
!! TTGCCTAATAGGTGTCGGCC+AGG + chr5_2:15445175-15445194 Msa0759690:CDS 55.0%
!! TAGGTGTCGGCCAGGAAACA+TGG + chr5_2:15445183-15445202 Msa0759690:CDS 55.0%
GTGAATGGACCGACCCAGAA+AGG + chr5_2:15445488-15445507 Msa0759690:three_prime_UTR 55.0%
!! AATGTGGGGGTGGTGGTGGA+CGG - chr5_2:15439447-15439466 None:intergenic 60.0%
ACCACCACCCCCACATTTCC+CGG + chr5_2:15439450-15439469 Msa0759690:CDS 60.0%
AGTGGTGGCCGGGAAATGTG+GGG - chr5_2:15439461-15439480 None:intergenic 60.0%
TTCACGCACCCCAACCACAC+AGG - chr5_2:15441191-15441210 None:intergenic 60.0%
!! GAGTGCTTTGGGGTGGAGAG+TGG + chr5_2:15441952-15441971 Msa0759690:intron 60.0%
!! CTTTGGGGTGGAGAGTGGGA+GGG + chr5_2:15441957-15441976 Msa0759690:intron 60.0%
! TTTGGGGTGGAGAGTGGGAG+GGG + chr5_2:15441958-15441977 Msa0759690:intron 60.0%
!! GGCGGCCAAGTGTTCTAAGG+CGG - chr5_2:15442328-15442347 None:intergenic 60.0%
TGTTGGAGGGCGGCACACAA+AGG + chr5_2:15442478-15442497 Msa0759690:intron 60.0%
GCTCTTGAGGCTGGGGTCAT+GGG + chr5_2:15443461-15443480 Msa0759690:intron 60.0%
AACCCCCCTCCCACAGTGTT+AGG - chr5_2:15443978-15443997 None:intergenic 60.0%
! ACACTGTGGGAGGGGGGTTT+TGG + chr5_2:15443979-15443998 Msa0759690:intron 60.0%
!!! TGTGGGAGGGGGGTTTTGGA+GGG + chr5_2:15443983-15444002 Msa0759690:intron 60.0%
!!! GGTTTTGGAGGGGAGGGGAA+TGG + chr5_2:15443994-15444013 Msa0759690:intron 60.0%
TTTGGAGGGGAGGGGAATGG+AGG + chr5_2:15443997-15444016 Msa0759690:intron 60.0%
TTGGAGGGGAGGGGAATGGA+GGG + chr5_2:15443998-15444017 Msa0759690:intron 60.0%
! GGGAAATGTGGGGGTGGTGG+TGG - chr5_2:15439451-15439470 None:intergenic 65.0%
GTGGTGGCCGGGAAATGTGG+GGG - chr5_2:15439460-15439479 None:intergenic 65.0%
CGCCTTTCAGCCCTTCCCAC+CGG + chr5_2:15439526-15439545 Msa0759690:CDS 65.0%
CTTTCAGCCCTTCCCACCGG+CGG + chr5_2:15439529-15439548 Msa0759690:CDS 65.0%
!! GCTTTGGGGTGGAGAGTGGG+AGG + chr5_2:15441956-15441975 Msa0759690:intron 65.0%
GGCTCTTGAGGCTGGGGTCA+TGG + chr5_2:15443460-15443479 Msa0759690:intron 65.0%
!! CTGTGGGAGGGGGGTTTTGG+AGG + chr5_2:15443982-15444001 Msa0759690:intron 65.0%
!!! GTGGGAGGGGGGTTTTGGAG+GGG + chr5_2:15443984-15444003 Msa0759690:intron 65.0%
!!! GAGGGGGGTTTTGGAGGGGA+GGG + chr5_2:15443988-15444007 Msa0759690:intron 65.0%
!!! AGGGGGGTTTTGGAGGGGAG+GGG + chr5_2:15443989-15444008 Msa0759690:intron 65.0%
GGGAAGGGTTTGGGAGGGCT+GGG - chr5_2:15444122-15444141 None:intergenic 65.0%
AGGGAAGGGTTTGGGAGGGC+TGG - chr5_2:15444123-15444142 None:intergenic 65.0%
!! CGGTGGCGGAGGTGAAGAGG+AGG - chr5_2:15439427-15439446 None:intergenic 70.0%
!! GGACGGTGGCGGAGGTGAAG+AGG - chr5_2:15439430-15439449 None:intergenic 70.0%
GCCGGGAAATGTGGGGGTGG+TGG - chr5_2:15439454-15439473 None:intergenic 70.0%
GTGGCCGGGAAATGTGGGGG+TGG - chr5_2:15439457-15439476 None:intergenic 70.0%
CGCCGGTGGGAAGGGCTGAA+AGG - chr5_2:15439531-15439550 None:intergenic 70.0%
!!! GGAGGGGGGTTTTGGAGGGG+AGG + chr5_2:15443987-15444006 Msa0759690:intron 70.0%
!! GTGGTGGTGGACGGTGGCGG+AGG - chr5_2:15439438-15439457 None:intergenic 75.0%
!! GGGGTGGTGGTGGACGGTGG+CGG - chr5_2:15439441-15439460 None:intergenic 75.0%
!! GTGGGGGTGGTGGTGGACGG+TGG - chr5_2:15439444-15439463 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 15439256 15445846 15439256 ID=Msa0759690;Name=Msa0759690
chr5_2 mRNA 15439256 15445846 15439256 ID=Msa0759690-mRNA-1;Parent=Msa0759690;Name=Msa0759690-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.83|1|1|1|6|636|624
chr5_2 exon 15439256 15440308 15439256 ID=Msa0759690-mRNA-1:exon:6981;Parent=Msa0759690-mRNA-1
chr5_2 exon 15441358 15441414 15441358 ID=Msa0759690-mRNA-1:exon:6982;Parent=Msa0759690-mRNA-1
chr5_2 exon 15441616 15441814 15441616 ID=Msa0759690-mRNA-1:exon:6983;Parent=Msa0759690-mRNA-1
chr5_2 exon 15443205 15443320 15443205 ID=Msa0759690-mRNA-1:exon:6984;Parent=Msa0759690-mRNA-1
chr5_2 exon 15444638 15444817 15444638 ID=Msa0759690-mRNA-1:exon:6985;Parent=Msa0759690-mRNA-1
chr5_2 exon 15444941 15445846 15444941 ID=Msa0759690-mRNA-1:exon:6986;Parent=Msa0759690-mRNA-1
chr5_2 CDS 15439256 15440308 15439256 ID=Msa0759690-mRNA-1:cds;Parent=Msa0759690-mRNA-1
chr5_2 CDS 15441358 15441414 15441358 ID=Msa0759690-mRNA-1:cds;Parent=Msa0759690-mRNA-1
chr5_2 CDS 15441616 15441814 15441616 ID=Msa0759690-mRNA-1:cds;Parent=Msa0759690-mRNA-1
chr5_2 CDS 15443205 15443320 15443205 ID=Msa0759690-mRNA-1:cds;Parent=Msa0759690-mRNA-1
chr5_2 CDS 15444638 15444817 15444638 ID=Msa0759690-mRNA-1:cds;Parent=Msa0759690-mRNA-1
chr5_2 CDS 15444941 15445210 15444941 ID=Msa0759690-mRNA-1:cds;Parent=Msa0759690-mRNA-1
chr5_2 three_prime_UTR 15445211 15445846 15445211 ID=Msa0759690-mRNA-1:three_prime_utr;Parent=Msa0759690-mRNA-1
Gene Sequence

>Msa0759690

CTGATTCAGTTTACGAAAGAGGAAGTTGCAGTTCAGGTCCTGAGATTTCAATGCCATCTTCATTTCTATCTGTTGACCTTCTTTTTCTCACTTCAATTCAATTCCATTCAATCACATACACTGACAGTGCACAACATGGGCTACACTTGCATCACCGCTTCCCTTCTTCCTCCTCTTCACCTCCGCCACCGTCCACCACCACCCCCACATTTCCCGGCCACCACTTTCCACTCTTTTTCGTCCATTAAACTAACCCTTTCTCACTCTTTTCGCCTTTCAGCCCTTCCCACCGGCGGTAATAACAATAACAATGGTGGTAGTGGTGGTGATTCATGGGGCAATAACCCTTTTGACTCTGACGATTCATCTTCATCTTCTTCAAATTCTCGTTACACCCTTTTGTTTACTTTACTATTCTCTTCTGTTACATTTTGTTTTTGCCAACTCGCAATGGCAAAAAACCGTTCTTTATCATCTGAAAATGATATTTTGACCCAACCCATTTACGAAGTCAAAGGTGGAAACTTGATTAGGCTATTCCCTGATAATTTGAAAGATATTTTCATTGCGTCGAATCCCGGGTTGTTTTCTGAATTATCATCTTTAAATTCATCACAAGTTCCAAGCTTTTTGTATAATAAGTGTAGAGAGTTTTTAGTTAGGTTGATGCTACCTGAAGGTTTTCCAAACAGTGTAACAAGTGATTATTTAGAGTATTCATTATGGAGAGGTGTTCAAGGTGTTGCTTGTCAGGTGAGTGGAGTGTTGGCAACTCAAGCTTTGCTTTATGCTGTTGGATTAGGGAAAGGGGCTATTCCTACTGCTGCTGCTATTAATTGGGTTCTGAAAGATGGAATTGGGTATCTTAGTAAGATTTTGTTGTCGGATTTCGGGAGGCATTTTGATGTTAATCCTAAAGGGTGGAGATTGTTTGCTGATCTTCTTGAAAATGCCGCGTTTGGGTTGGAGATGTGTACTCCTGCTTTTCCTCATTTGTTTGTGCCTATTGGTGCTTTTGCTGGTGCTTCTCGATCGGCTGCTTCTTTGATTCAGGCTTCTACTAGGAGTTGTTTCTTTGCCGGTTTCGCTGCTCAAAGGAATTTTGCTGAGGTAATTGCTAAAGGTGAAGTTCAAGGAATGGTCAGCAGGTTTATTGGTATCGGGCTTGGTATAGGACTGGGCAACTGCATAGGTTCATCCACGCCTCTTGTTCTTGCTTCTTTTTGTGTCGTGACTTGGGTCCACATGTACTGCAATCTAAAGTCTTACCAGTCCATTCAATTGCGGACTTTAAATCCTTACCGTGCAAGTTTGGTTTTCAGTGAATATCTACTGAGTGGCCAGGCTCCTCCAGTTAAAGAGGTCAATGCCGAGGAGCCGCTATTTCCAGCAGTACCCATATTAAATGCACCTTTTGCAAACAAAGAGACACAATCAATTGTTTTATCATCTGAAGCAAAAGATGCAGCTGTAGAAATTGAAAGCCGTCTGCAGCTTGGATCCAAACTCAGTGAAATTATCAACAATAAGGAGGAAGTGCTTGCTCTCTTTTCTCTTTATAAAAATGAAGGCTACATCTTGTCTGAGAACACGGGAAAATTCTGTGTGGTGCTTAAAGAAACTTGTTCACAGCTGGATATGCTCAAGGCATTGTTTCAGGTCAACTATCTTTATTGGTTAGAGAAGAACGCAGGAATTGAAGGTAGAGGAACCCTTTATGACTGCAAACCTGGTGGTAGGCTGCAAATATCTCTAGAATATGCGGAAAGGGAATTCAATCATGTTAGAGATGATGGAGAATCAGTTGGTTGGATCACAGACGGGCTTATTGCAAGGCCTTTGCCTAATAGGTGTCGGCCAGGAAACATGGAGTGA
Protein sequence

>Msa0759690

LIQFTKEEVAVQVLRFQCHLHFYLLTFFFSLQFNSIQSHTLTVHNMGYTCITASLLPPLHLRHRPPPPPHFPATTFHSFSSIKLTLSHSFRLSALPTGGNNNNNGGSGGDSWGNNPFDSDDSSSSSSNSRYTLLFTLLFSSVTFCFCQLAMAKNRSLSSENDILTQPIYEVKGGNLIRLFPDNLKDIFIASNPGLFSELSSLNSSQVPSFLYNKCREFLVRLMLPEGFPNSVTSDYLEYSLWRGVQGVACQVSGVLATQALLYAVGLGKGAIPTAAAINWVLKDGIGYLSKILLSDFGRHFDVNPKGWRLFADLLENAAFGLEMCTPAFPHLFVPIGAFAGASRSAASLIQASTRSCFFAGFAAQRNFAEVIAKGEVQGMVSRFIGIGLGIGLGNCIGSSTPLVLASFCVVTWVHMYCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQAPPVKEVNAEEPLFPAVPILNAPFANKETQSIVLSSEAKDAAVEIESRLQLGSKLSEIINNKEEVLALFSLYKNEGYILSENTGKFCVVLKETCSQLDMLKALFQVNYLYWLEKNAGIEGRGTLYDCKPGGRLQISLEYAEREFNHVRDDGESVGWITDGLIARPLPNRCRPGNME*