Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590840 | XP_013454907.1 | 88.601 | 193 | 18 | 3 | 20 | 210 | 381 | 571 | 6.67e-96 | 301 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590840 | sp|Q9LZM8|BLH9_ARATH | 43.243 | 185 | 86 | 4 | 20 | 201 | 369 | 537 | 1.56e-27 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590840 | A0A072USU8 | 88.601 | 193 | 18 | 3 | 20 | 210 | 381 | 571 | 3.18e-96 | 301 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0590840 | TF | HB-other |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012060 | Msa0590840 | 0.807448 | 5.029700e-50 | -8.615850e-47 |
| Msa0017510 | Msa0590840 | 0.814380 | 1.586548e-51 | -8.615850e-47 |
| Msa0039330 | Msa0590840 | 0.806553 | 7.778766e-50 | -8.615850e-47 |
| Msa0077610 | Msa0590840 | 0.807506 | 4.889330e-50 | -8.615850e-47 |
| Msa0101810 | Msa0590840 | -0.824940 | 6.147292e-54 | -8.615850e-47 |
| Msa0114060 | Msa0590840 | 0.803498 | 3.388126e-49 | -8.615850e-47 |
| Msa0140780 | Msa0590840 | 0.804593 | 2.004964e-49 | -8.615850e-47 |
| Msa0145310 | Msa0590840 | 0.804032 | 2.624854e-49 | -8.615850e-47 |
| Msa0157290 | Msa0590840 | 0.814726 | 1.330047e-51 | -8.615850e-47 |
| Msa0157310 | Msa0590840 | 0.816465 | 5.454433e-52 | -8.615850e-47 |
| Msa0169860 | Msa0590840 | 0.809213 | 2.114582e-50 | -8.615850e-47 |
| Msa0175390 | Msa0590840 | 0.804886 | 1.741686e-49 | -8.615850e-47 |
| Msa0178860 | Msa0590840 | -0.814479 | 1.509028e-51 | -8.615850e-47 |
| Msa0178930 | Msa0590840 | 0.818308 | 2.097735e-52 | -8.615850e-47 |
| Msa0185640 | Msa0590840 | -0.825230 | 5.249261e-54 | -8.615850e-47 |
| Msa0188830 | Msa0590840 | 0.815726 | 7.977225e-52 | -8.615850e-47 |
| Msa0191250 | Msa0590840 | 0.804020 | 2.639516e-49 | -8.615850e-47 |
| Msa0206790 | Msa0590840 | 0.805687 | 1.183768e-49 | -8.615850e-47 |
| Msa0212990 | Msa0590840 | 0.806025 | 1.004996e-49 | -8.615850e-47 |
| Msa0215320 | Msa0590840 | -0.826167 | 3.147018e-54 | -8.615850e-47 |
| Msa0217400 | Msa0590840 | 0.809015 | 2.330986e-50 | -8.615850e-47 |
| Msa0220580 | Msa0590840 | 0.807806 | 4.221714e-50 | -8.615850e-47 |
| Msa0226250 | Msa0590840 | 0.802929 | 4.442606e-49 | -8.615850e-47 |
| Msa0233300 | Msa0590840 | 0.809884 | 1.517130e-50 | -8.615850e-47 |
| Msa0237660 | Msa0590840 | 0.824321 | 8.598918e-54 | -8.615850e-47 |
| Msa0371730 | Msa0590840 | 0.812050 | 5.151288e-51 | -8.615850e-47 |
| Msa0376590 | Msa0590840 | 0.802086 | 6.629171e-49 | -8.615850e-47 |
| Msa0379640 | Msa0590840 | 0.836140 | 1.113926e-56 | -8.615850e-47 |
| Msa0412970 | Msa0590840 | 0.801279 | 9.703188e-49 | -8.615850e-47 |
| Msa0428930 | Msa0590840 | 0.806443 | 8.206118e-50 | -8.615850e-47 |
| Msa0430420 | Msa0590840 | 0.801514 | 8.685222e-49 | -8.615850e-47 |
| Msa0431060 | Msa0590840 | 0.816427 | 5.562418e-52 | -8.615850e-47 |
| Msa0444750 | Msa0590840 | -0.803446 | 3.472182e-49 | -8.615850e-47 |
| Msa0465680 | Msa0590840 | -0.818928 | 1.517322e-52 | -8.615850e-47 |
| Msa0466120 | Msa0590840 | 0.813586 | 2.374809e-51 | -8.615850e-47 |
| Msa0466390 | Msa0590840 | 0.830397 | 3.005042e-55 | -8.615850e-47 |
| Msa0467900 | Msa0590840 | -0.800124 | 1.669648e-48 | -8.615850e-47 |
| Msa0469290 | Msa0590840 | 0.801552 | 8.534288e-49 | -8.615850e-47 |
| Msa0469940 | Msa0590840 | -0.800326 | 1.518733e-48 | -8.615850e-47 |
| Msa0475490 | Msa0590840 | 0.818682 | 1.725592e-52 | -8.615850e-47 |
| Msa0477130 | Msa0590840 | -0.809300 | 2.025922e-50 | -8.615850e-47 |
| Msa0249560 | Msa0590840 | 0.800232 | 1.587447e-48 | -8.615850e-47 |
| Msa0266000 | Msa0590840 | -0.805209 | 1.491127e-49 | -8.615850e-47 |
| Msa0285450 | Msa0590840 | 0.806448 | 8.184175e-50 | -8.615850e-47 |
| Msa0288100 | Msa0590840 | 0.844049 | 9.618164e-59 | -8.615850e-47 |
| Msa0306210 | Msa0590840 | -0.804146 | 2.484684e-49 | -8.615850e-47 |
| Msa0323080 | Msa0590840 | 0.801450 | 8.954415e-49 | -8.615850e-47 |
| Msa0326520 | Msa0590840 | 0.809111 | 2.223829e-50 | -8.615850e-47 |
| Msa0338000 | Msa0590840 | 0.808589 | 2.875924e-50 | -8.615850e-47 |
| Msa0338110 | Msa0590840 | 0.800955 | 1.130699e-48 | -8.615850e-47 |
| Msa0340450 | Msa0590840 | 0.824314 | 8.632917e-54 | -8.615850e-47 |
| Msa0342340 | Msa0590840 | -0.818471 | 1.926694e-52 | -8.615850e-47 |
| Msa0344690 | Msa0590840 | -0.819036 | 1.434089e-52 | -8.615850e-47 |
| Msa0351030 | Msa0590840 | 0.804834 | 1.785878e-49 | -8.615850e-47 |
| Msa0351100 | Msa0590840 | 0.805315 | 1.416704e-49 | -8.615850e-47 |
| Msa0354800 | Msa0590840 | -0.801841 | 7.444672e-49 | -8.615850e-47 |
| Msa0484780 | Msa0590840 | 0.816212 | 6.211939e-52 | -8.615850e-47 |
| Msa0502100 | Msa0590840 | 0.807326 | 5.337428e-50 | -8.615850e-47 |
| Msa0512750 | Msa0590840 | 0.803811 | 2.916752e-49 | -8.615850e-47 |
| Msa0512900 | Msa0590840 | 0.813545 | 2.424991e-51 | -8.615850e-47 |
| Msa0515010 | Msa0590840 | 0.818732 | 1.681014e-52 | -8.615850e-47 |
| Msa0532170 | Msa0590840 | 0.802149 | 6.432751e-49 | -8.615850e-47 |
| Msa0536220 | Msa0590840 | 0.843812 | 1.112735e-58 | -8.615850e-47 |
| Msa0553460 | Msa0590840 | 0.810663 | 1.030558e-50 | -8.615850e-47 |
| Msa0555020 | Msa0590840 | 0.809168 | 2.162561e-50 | -8.615850e-47 |
| Msa0558690 | Msa0590840 | 0.814174 | 1.762306e-51 | -8.615850e-47 |
| Msa0566500 | Msa0590840 | -0.817533 | 3.138302e-52 | -8.615850e-47 |
| Msa0567020 | Msa0590840 | 0.813421 | 2.581243e-51 | -8.615850e-47 |
| Msa0590840 | Msa0616560 | -0.806014 | 1.010566e-49 | -8.615850e-47 |
| Msa0590840 | Msa0617640 | 0.803713 | 3.056878e-49 | -8.615850e-47 |
| Msa0590840 | Msa0655990 | -0.817454 | 3.271065e-52 | -8.615850e-47 |
| Msa0590840 | Msa0657610 | 0.804846 | 1.775624e-49 | -8.615850e-47 |
| Msa0590840 | Msa0657970 | 0.831255 | 1.851530e-55 | -8.615850e-47 |
| Msa0590840 | Msa0658570 | 0.839457 | 1.566793e-57 | -8.615850e-47 |
| Msa0590840 | Msa0661190 | -0.818364 | 2.037444e-52 | -8.615850e-47 |
| Msa0590840 | Msa0662650 | 0.805023 | 1.630228e-49 | -8.615850e-47 |
| Msa0590840 | Msa0669440 | 0.811615 | 6.406819e-51 | -8.615850e-47 |
| Msa0590840 | Msa0672690 | 0.802858 | 4.595287e-49 | -8.615850e-47 |
| Msa0590840 | Msa0690440 | 0.821624 | 3.657368e-53 | -8.615850e-47 |
| Msa0590840 | Msa0692230 | 0.803428 | 3.502825e-49 | -8.615850e-47 |
| Msa0590840 | Msa0696640 | 0.801210 | 1.002425e-48 | -8.615850e-47 |
| Msa0590840 | Msa0699920 | -0.818173 | 2.250493e-52 | -8.615850e-47 |
| Msa0590840 | Msa0701900 | 0.804621 | 1.978506e-49 | -8.615850e-47 |
| Msa0590840 | Msa0703490 | 0.806715 | 7.188711e-50 | -8.615850e-47 |
| Msa0590840 | Msa0708860 | 0.806004 | 1.015230e-49 | -8.615850e-47 |
| Msa0590840 | Msa0715720 | 0.801643 | 8.175369e-49 | -8.615850e-47 |
| Msa0590840 | Msa0725220 | 0.802767 | 4.797677e-49 | -8.615850e-47 |
| Msa0590840 | Msa0736060 | 0.805531 | 1.275981e-49 | -8.615850e-47 |
| Msa0590840 | Msa0744170 | -0.827703 | 1.351245e-54 | -8.615850e-47 |
| Msa0590840 | Msa0745790 | 0.801082 | 1.065088e-48 | -8.615850e-47 |
| Msa0590840 | Msa0766630 | 0.814105 | 1.824581e-51 | -8.615850e-47 |
| Msa0590840 | Msa0777930 | 0.819821 | 9.496361e-53 | -8.615850e-47 |
| Msa0590840 | Msa0787470 | 0.812519 | 4.069619e-51 | -8.615850e-47 |
| Msa0590840 | Msa0788070 | -0.814137 | 1.795538e-51 | -8.615850e-47 |
| Msa0590840 | Msa0806090 | 0.822425 | 2.385599e-53 | -8.615850e-47 |
| Msa0590840 | Msa0807030 | 0.809307 | 2.019144e-50 | -8.615850e-47 |
| Msa0590840 | Msa0813200 | 0.815386 | 9.494040e-52 | -8.615850e-47 |
| Msa0590840 | Msa0815180 | 0.802723 | 4.899507e-49 | -8.615850e-47 |
| Msa0590840 | Msa0829620 | 0.801882 | 7.299053e-49 | -8.615850e-47 |
| Msa0590840 | Msa0840820 | 0.803487 | 3.404957e-49 | -8.615850e-47 |
| Msa0590840 | Msa0843260 | 0.808297 | 3.319263e-50 | -8.615850e-47 |
| Msa0590840 | Msa0867890 | 0.815886 | 7.346903e-52 | -8.615850e-47 |
| Msa0590840 | Msa0870530 | 0.817200 | 3.730601e-52 | -8.615850e-47 |
| Msa0590840 | Msa0880140 | 0.818373 | 2.027562e-52 | -8.615850e-47 |
| Msa0590840 | Msa0885280 | 0.832776 | 7.794130e-56 | -8.615850e-47 |
| Msa0590840 | Msa0897880 | 0.806782 | 6.958771e-50 | -8.615850e-47 |
| Msa0590840 | Msa0907070 | 0.824427 | 8.120340e-54 | -8.615850e-47 |
| Msa0590840 | Msa0922330 | 0.800189 | 1.619370e-48 | -8.615850e-47 |
| Msa0590840 | Msa0930390 | 0.830159 | 3.436440e-55 | -8.615850e-47 |
| Msa0590840 | Msa0935910 | 0.811098 | 8.296153e-51 | -8.615850e-47 |
| Msa0590840 | Msa0942200 | 0.814298 | 1.654811e-51 | -8.615850e-47 |
| Msa0590840 | Msa0961420 | -0.818304 | 2.101743e-52 | -8.615850e-47 |
| Msa0590840 | Msa0990960 | 0.807621 | 4.623053e-50 | -8.615850e-47 |
| Msa0590840 | Msa1014540 | 0.820567 | 6.407901e-53 | -8.615850e-47 |
| Msa0590840 | Msa1015790 | 0.806730 | 7.138728e-50 | -8.615850e-47 |
| Msa0590840 | Msa1041730 | 0.803104 | 4.087665e-49 | -8.615850e-47 |
| Msa0590840 | Msa1044420 | 0.817609 | 3.016886e-52 | -8.615850e-47 |
| Msa0590840 | Msa1059570 | 0.808855 | 2.522528e-50 | -8.615850e-47 |
| Msa0590840 | Msa1075080 | -0.828831 | 7.224924e-55 | -8.615850e-47 |
| Msa0590840 | Msa1075220 | -0.856015 | 4.280410e-62 | -8.615850e-47 |
| Msa0590840 | Msa1082500 | 0.834653 | 2.646491e-56 | -8.615850e-47 |
| Msa0590840 | Msa1085300 | 0.844759 | 6.197016e-59 | -8.615850e-47 |
| Msa0590840 | Msa1090260 | 0.801349 | 9.388561e-49 | -8.615850e-47 |
| Msa0590840 | Msa1091830 | 0.819013 | 1.451264e-52 | -8.615850e-47 |
| Msa0590840 | Msa1100480 | 0.805293 | 1.431852e-49 | -8.615850e-47 |
| Msa0590840 | Msa1116130 | -0.847434 | 1.159012e-59 | -8.615850e-47 |
| Msa0590840 | Msa1119480 | 0.836963 | 6.876530e-57 | -8.615850e-47 |
| Msa0590840 | Msa1121450 | -0.822221 | 2.659980e-53 | -8.615850e-47 |
| Msa0590840 | Msa1124050 | 0.822204 | 2.684442e-53 | -8.615850e-47 |
| Msa0590840 | Msa1124540 | -0.834601 | 2.728272e-56 | -8.615850e-47 |
| Msa0590840 | Msa1125080 | 0.803488 | 3.403539e-49 | -8.615850e-47 |
| Msa0590840 | Msa1131220 | 0.813166 | 2.936923e-51 | -8.615850e-47 |
| Msa0590840 | Msa1139000 | -0.850432 | 1.705179e-60 | -8.615850e-47 |
| Msa0590840 | Msa1154280 | 0.808979 | 2.372845e-50 | -8.615850e-47 |
| Msa0590840 | Msa1162550 | -0.861046 | 1.351075e-63 | -8.615850e-47 |
| Msa0590840 | Msa1167220 | 0.805995 | 1.019603e-49 | -8.615850e-47 |
| Msa0590840 | Msa1169090 | 0.809994 | 1.437052e-50 | -8.615850e-47 |
| Msa0590840 | Msa1183100 | -0.801815 | 7.534457e-49 | -8.615850e-47 |
| Msa0590840 | Msa1204980 | -0.823666 | 1.225156e-53 | -8.615850e-47 |
| Msa0590840 | Msa1205010 | -0.821558 | 3.787811e-53 | -8.615850e-47 |
| Msa0590840 | Msa1205130 | 0.812311 | 4.520052e-51 | -8.615850e-47 |
| Msa0590840 | Msa1208180 | 0.819539 | 1.101440e-52 | -8.615850e-47 |
| Msa0590840 | Msa1208340 | 0.803230 | 3.848764e-49 | -8.615850e-47 |
| Msa0590840 | Msa1228210 | 0.807437 | 5.057293e-50 | -8.615850e-47 |
| Msa0590840 | Msa1233890 | 0.800436 | 1.442491e-48 | -8.615850e-47 |
| Msa0590840 | Msa1238930 | 0.821347 | 4.238425e-53 | -8.615850e-47 |
| Msa0590840 | Msa1249490 | 0.809133 | 2.199198e-50 | -8.615850e-47 |
| Msa0590840 | Msa1250890 | 0.804495 | 2.102343e-49 | -8.615850e-47 |
| Msa0590840 | Msa1256540 | -0.824935 | 6.164257e-54 | -8.615850e-47 |
| Msa0590840 | Msa1267060 | 0.830316 | 3.145441e-55 | -8.615850e-47 |
| Msa0590840 | Msa1271280 | 0.802978 | 4.340362e-49 | -8.615850e-47 |
| Msa0590840 | Msa1271300 | 0.821140 | 4.730251e-53 | -8.615850e-47 |
| Msa0590840 | Msa1279210 | 0.801064 | 1.073867e-48 | -8.615850e-47 |
| Msa0590840 | Msa1283860 | 0.823450 | 1.376503e-53 | -8.615850e-47 |
| Msa0590840 | Msa1296960 | -0.824695 | 7.023257e-54 | -8.615850e-47 |
| Msa0590840 | Msa1298260 | 0.808213 | 3.458225e-50 | -8.615850e-47 |
| Msa0590840 | Msa1305190 | 0.802908 | 4.486994e-49 | -8.615850e-47 |
| Msa0590840 | Msa1305340 | 0.816509 | 5.330304e-52 | -8.615850e-47 |
| Msa0590840 | Msa1308380 | 0.806250 | 9.013400e-50 | -8.615850e-47 |
| Msa0590840 | Msa1322190 | 0.811683 | 6.193049e-51 | -8.615850e-47 |
| Msa0590840 | Msa1322890 | 0.808634 | 2.811936e-50 | -8.615850e-47 |
| Msa0590840 | Msa1324550 | 0.806901 | 6.567671e-50 | -8.615850e-47 |
| Msa0590840 | Msa1327050 | 0.814575 | 1.436585e-51 | -8.615850e-47 |
| Msa0590840 | Msa1351620 | 0.811359 | 7.284305e-51 | -8.615850e-47 |
| Msa0590840 | Msa1358960 | 0.800866 | 1.179052e-48 | -8.615850e-47 |
| Msa0590840 | Msa1376890 | 0.833001 | 6.853554e-56 | -8.615850e-47 |
| Msa0590840 | Msa1384350 | 0.816450 | 5.496514e-52 | -8.615850e-47 |
| Msa0590840 | Msa1390050 | 0.804868 | 1.756566e-49 | -8.615850e-47 |
| Msa0590840 | Msa1392260 | 0.813862 | 2.064769e-51 | -8.615850e-47 |
| Msa0590840 | Msa1395660 | 0.814709 | 1.341611e-51 | -8.615850e-47 |
| Msa0590840 | Msa1401530 | 0.828023 | 1.132151e-54 | -8.615850e-47 |
| Msa0590840 | Msa1429900 | 0.801750 | 7.770609e-49 | -8.615850e-47 |
| Msa0590840 | Msa1445610 | -0.801953 | 7.057775e-49 | -8.615850e-47 |
| Msa0590840 | Msa1451620 | -0.864582 | 1.096186e-64 | -8.615850e-47 |
| Msa0590840 | Msa1454860 | 0.808341 | 3.248758e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590840 | MtrunA17_Chr4g0008591 | 88.601 | 193 | 18 | 3 | 20 | 210 | 381 | 571 | 6.13e-100 | 301 |
| Msa0590840 | MtrunA17_Chr7g0240371 | 56.150 | 187 | 51 | 5 | 20 | 204 | 326 | 483 | 5.89e-55 | 182 |
| Msa0590840 | MtrunA17_Chr4g0028701 | 68.116 | 69 | 19 | 1 | 20 | 85 | 491 | 559 | 4.88e-23 | 96.7 |
| Msa0590840 | MtrunA17_Chr4g0025521 | 55.882 | 68 | 30 | 0 | 20 | 87 | 423 | 490 | 6.50e-21 | 90.5 |
| Msa0590840 | MtrunA17_Chr7g0267481 | 53.165 | 79 | 37 | 0 | 20 | 98 | 379 | 457 | 8.99e-21 | 90.1 |
| Msa0590840 | MtrunA17_Chr2g0327021 | 73.077 | 52 | 14 | 0 | 20 | 71 | 460 | 511 | 5.15e-20 | 87.8 |
| Msa0590840 | MtrunA17_Chr8g0373801 | 55.882 | 68 | 30 | 0 | 20 | 87 | 597 | 664 | 1.19e-19 | 86.7 |
| Msa0590840 | MtrunA17_Chr5g0403251 | 52.703 | 74 | 35 | 0 | 20 | 93 | 545 | 618 | 6.22e-19 | 84.7 |
| Msa0590840 | MtrunA17_Chr3g0141941 | 70.000 | 50 | 15 | 0 | 20 | 69 | 366 | 415 | 4.55e-18 | 82.0 |
| Msa0590840 | MtrunA17_Chr1g0155681 | 68.000 | 50 | 16 | 0 | 20 | 69 | 377 | 426 | 9.98e-18 | 81.3 |
| Msa0590840 | MtrunA17_Chr3g0141931 | 56.897 | 58 | 25 | 0 | 20 | 77 | 369 | 426 | 6.54e-17 | 78.6 |
| Msa0590840 | MtrunA17_Chr8g0387321 | 76.744 | 43 | 10 | 0 | 20 | 62 | 390 | 432 | 6.20e-16 | 75.9 |
| Msa0590840 | MtrunA17_Chr1g0151681 | 50.769 | 65 | 31 | 1 | 26 | 89 | 451 | 515 | 1.46e-15 | 74.7 |
| Msa0590840 | MtrunA17_Chr1g0177751 | 78.049 | 41 | 9 | 0 | 20 | 60 | 367 | 407 | 3.97e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0590840 | AT5G02030.1 | 43.243 | 185 | 86 | 4 | 20 | 201 | 369 | 537 | 1.58e-28 | 112 |
| Msa0590840 | AT2G27990.1 | 80.769 | 52 | 10 | 0 | 20 | 71 | 445 | 496 | 1.55e-21 | 92.4 |
| Msa0590840 | AT4G34610.2 | 59.211 | 76 | 29 | 1 | 9 | 84 | 324 | 397 | 6.75e-21 | 90.5 |
| Msa0590840 | AT4G34610.4 | 59.211 | 76 | 29 | 1 | 9 | 84 | 324 | 397 | 6.75e-21 | 90.5 |
| Msa0590840 | AT4G34610.3 | 59.211 | 76 | 29 | 1 | 9 | 84 | 324 | 397 | 6.75e-21 | 90.5 |
| Msa0590840 | AT4G34610.1 | 59.211 | 76 | 29 | 1 | 9 | 84 | 324 | 397 | 6.75e-21 | 90.5 |
| Msa0590840 | AT2G16400.1 | 64.407 | 59 | 21 | 0 | 11 | 69 | 297 | 355 | 4.84e-19 | 85.1 |
| Msa0590840 | AT5G41410.1 | 71.154 | 52 | 15 | 0 | 20 | 71 | 412 | 463 | 5.92e-19 | 85.1 |
| Msa0590840 | AT2G27220.1 | 35.465 | 172 | 77 | 6 | 20 | 181 | 249 | 396 | 5.40e-18 | 82.0 |
| Msa0590840 | AT2G27220.3 | 35.465 | 172 | 77 | 6 | 20 | 181 | 249 | 396 | 5.40e-18 | 82.0 |
| Msa0590840 | AT2G27220.2 | 36.047 | 172 | 76 | 7 | 20 | 181 | 267 | 414 | 6.85e-18 | 81.6 |
| Msa0590840 | AT4G36870.2 | 72.340 | 47 | 13 | 0 | 20 | 66 | 519 | 565 | 2.94e-17 | 80.1 |
| Msa0590840 | AT4G36870.1 | 72.340 | 47 | 13 | 0 | 20 | 66 | 519 | 565 | 2.94e-17 | 80.1 |
| Msa0590840 | AT1G19700.1 | 66.000 | 50 | 17 | 0 | 20 | 69 | 372 | 421 | 3.51e-17 | 79.7 |
| Msa0590840 | AT1G19700.3 | 66.000 | 50 | 17 | 0 | 20 | 69 | 372 | 421 | 3.51e-17 | 79.7 |
| Msa0590840 | AT1G19700.5 | 66.000 | 50 | 17 | 0 | 20 | 69 | 372 | 421 | 3.51e-17 | 79.7 |
| Msa0590840 | AT1G19700.4 | 66.000 | 50 | 17 | 0 | 20 | 69 | 372 | 421 | 3.51e-17 | 79.7 |
| Msa0590840 | AT1G19700.2 | 66.000 | 50 | 17 | 0 | 20 | 69 | 372 | 421 | 3.51e-17 | 79.7 |
| Msa0590840 | AT2G23760.2 | 72.340 | 47 | 13 | 0 | 20 | 66 | 445 | 491 | 3.93e-17 | 79.7 |
| Msa0590840 | AT2G23760.1 | 72.340 | 47 | 13 | 0 | 20 | 66 | 445 | 491 | 3.93e-17 | 79.7 |
| Msa0590840 | AT2G23760.3 | 72.340 | 47 | 13 | 0 | 20 | 66 | 445 | 491 | 3.93e-17 | 79.7 |
| Msa0590840 | AT2G23760.4 | 76.744 | 43 | 10 | 0 | 24 | 66 | 501 | 543 | 5.61e-17 | 79.3 |
| Msa0590840 | AT1G75430.1 | 58.621 | 58 | 24 | 0 | 26 | 83 | 229 | 286 | 6.29e-17 | 77.8 |
| Msa0590840 | AT1G75410.1 | 64.000 | 50 | 18 | 0 | 20 | 69 | 367 | 416 | 1.02e-16 | 78.6 |
| Msa0590840 | AT1G75410.2 | 64.000 | 50 | 18 | 0 | 20 | 69 | 367 | 416 | 1.02e-16 | 78.6 |
| Msa0590840 | AT2G35940.3 | 43.564 | 101 | 46 | 2 | 20 | 110 | 406 | 505 | 1.52e-15 | 75.1 |
| Msa0590840 | AT2G35940.1 | 43.564 | 101 | 46 | 2 | 20 | 110 | 406 | 505 | 1.52e-15 | 75.1 |
| Msa0590840 | AT2G35940.2 | 43.564 | 101 | 46 | 2 | 20 | 110 | 406 | 505 | 1.52e-15 | 75.1 |
| Msa0590840 | AT4G32980.1 | 70.732 | 41 | 12 | 0 | 26 | 66 | 399 | 439 | 9.37e-15 | 72.8 |
| Msa0590840 | AT4G32980.2 | 70.732 | 41 | 12 | 0 | 26 | 66 | 399 | 439 | 9.37e-15 | 72.8 |
Find 42 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATAATTACCTTCATTAT+TGG | 0.154139 | 4_2:+14632931 | None:intergenic |
| AATCGTTGAGCTGCACTTAA+AGG | 0.224777 | 4_2:+14632971 | None:intergenic |
| TGACTCCTAATTGGTATGTT+AGG | 0.316989 | 4_2:+14633178 | None:intergenic |
| TGTTGTCCTTGACTCCTAAT+TGG | 0.334463 | 4_2:+14633169 | None:intergenic |
| TTAAGTGCAGCTCAACGATT+TGG | 0.354571 | 4_2:-14632968 | Msa0590840:CDS |
| TTGTGTATCAGGTGTCAAAT+TGG | 0.359128 | 4_2:-14633426 | Msa0590840:intron |
| TACCTTCATTATTGGTTTCA+AGG | 0.361603 | 4_2:+14632939 | None:intergenic |
| GTTGGTAGTGGAAGCAATAA+TGG | 0.383790 | 4_2:-14633085 | Msa0590840:CDS |
| TAAATGCAAGAGTAAGGCTT+TGG | 0.402125 | 4_2:-14633399 | Msa0590840:CDS |
| AAATTCCTAACATACCAATT+AGG | 0.407283 | 4_2:-14633183 | Msa0590840:CDS |
| TATGTTAGGAATTTCATTTA+CGG | 0.414873 | 4_2:+14633192 | None:intergenic |
| TGAGCTGCACTTAAAGGAAA+TGG | 0.423599 | 4_2:+14632977 | None:intergenic |
| GGTTCATAAATGCAAGAGTA+AGG | 0.433955 | 4_2:-14633405 | Msa0590840:CDS |
| CTTTATCAAAATCATGGGAT+TGG | 0.443197 | 4_2:-14633010 | Msa0590840:CDS |
| AACAAAATGAAGAAAATTGT+CGG | 0.448717 | 4_2:-14633318 | Msa0590840:CDS |
| GCAGCTCAACGATTTGGTCT+TGG | 0.449764 | 4_2:-14632962 | Msa0590840:CDS |
| GACAATGCTCGACACATTCA+AGG | 0.454108 | 4_2:-14633785 | None:intergenic |
| GACTAGAGGGTGTACCTTGA+AGG | 0.462129 | 4_2:-14632679 | None:intergenic |
| AACCGGTCTATCGCGTAGCC+AGG | 0.468227 | 4_2:-14633549 | Msa0590840:intron |
| CTAGGACTTTATCAAAATCA+TGG | 0.477214 | 4_2:-14633016 | Msa0590840:CDS |
| CCAACACCTACATGTTGAAA+AGG | 0.482247 | 4_2:+14633118 | None:intergenic |
| TGTCGATGTAGACGGATTCT+CGG | 0.491856 | 4_2:+14633246 | None:intergenic |
| ATGTGAATTTCTTCCACCAT+TGG | 0.504116 | 4_2:+14633373 | None:intergenic |
| GGCCTTGAAACCAATAATGA+AGG | 0.519264 | 4_2:-14632941 | Msa0590840:intron |
| ATTTACGGCCCGCTTGTAAG+TGG | 0.527527 | 4_2:+14633207 | None:intergenic |
| ATAATGTTGGCTAAACAAAC+CGG | 0.528557 | 4_2:-14633566 | Msa0590840:CDS |
| GGAATGAACATTGTTGGTAG+TGG | 0.533845 | 4_2:-14633097 | Msa0590840:CDS |
| GGTGTTGGAATGAACATTGT+TGG | 0.538133 | 4_2:-14633103 | Msa0590840:CDS |
| TAGGACTTTATCAAAATCAT+GGG | 0.549166 | 4_2:-14633015 | Msa0590840:CDS |
| TGATACAGACAAAATAATGT+TGG | 0.550720 | 4_2:-14633579 | Msa0590840:CDS |
| AACATACCAATTAGGAGTCA+AGG | 0.566002 | 4_2:-14633175 | Msa0590840:CDS |
| TCATGATGCCACTTACAAGC+GGG | 0.571787 | 4_2:-14633215 | Msa0590840:CDS |
| TACCTGGCTACGCGATAGAC+CGG | 0.588694 | 4_2:+14633547 | None:intergenic |
| GAAACTAGAGAAGTATCTGA+AGG | 0.590625 | 4_2:+14633268 | None:intergenic |
| AACTTATCTGTCGATGTAGA+CGG | 0.592212 | 4_2:+14633238 | None:intergenic |
| TTCATGATGCCACTTACAAG+CGG | 0.616315 | 4_2:-14633216 | Msa0590840:CDS |
| AGTAAGGCTTTGGAAACCAA+TGG | 0.617622 | 4_2:-14633389 | Msa0590840:CDS |
| TTATACTTTAGTCAGGATCA+CGG | 0.618530 | 4_2:-14633739 | Msa0590840:CDS |
| AAAGGTAGACTCATTTGTTG+TGG | 0.632009 | 4_2:+14633136 | None:intergenic |
| AGTAATGTGTCATTGACACT+AGG | 0.633869 | 4_2:-14633034 | Msa0590840:CDS |
| AAATTCACATGTTAGAAACA+AGG | 0.662688 | 4_2:-14633360 | Msa0590840:CDS |
| AAGGCTTTGGAAACCAATGG+TGG | 0.671971 | 4_2:-14633386 | Msa0590840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAAAAAAATCTATTTTTT+AGG | + | chr4_2:14633756-14633775 | None:intergenic | 10.0% |
| !!! | AAGAAAAAAATCTATTTTTT+AGG | + | chr4_2:14633756-14633775 | None:intergenic | 10.0% |
| !!! | GAAATTAATGATTTAGAATA+CGG | + | chr4_2:14632966-14632985 | None:intergenic | 15.0% |
| !!! | GAAATTAATGATTTAGAATA+CGG | + | chr4_2:14632966-14632985 | None:intergenic | 15.0% |
| !! | ATAGATATTGTTATATTGGT+AGG | + | chr4_2:14633016-14633035 | None:intergenic | 20.0% |
| !! | CAAGATAGATATTGTTATAT+TGG | + | chr4_2:14633020-14633039 | None:intergenic | 20.0% |
| !! | AACAAAATGAAGAAAATTGT+CGG | - | chr4_2:14633145-14633164 | Msa0590840:CDS | 20.0% |
| !! | TATGTTAGGAATTTCATTTA+CGG | + | chr4_2:14633274-14633293 | None:intergenic | 20.0% |
| !! | AACATAATTACCTTCATTAT+TGG | + | chr4_2:14633535-14633554 | None:intergenic | 20.0% |
| !! | TTTCTTATAATTATGACTAG+AGG | - | chr4_2:14633770-14633789 | Msa0590840:CDS | 20.0% |
| !! | TTCTTATAATTATGACTAGA+GGG | - | chr4_2:14633771-14633790 | Msa0590840:CDS | 20.0% |
| !! | ATAGATATTGTTATATTGGT+AGG | + | chr4_2:14633016-14633035 | None:intergenic | 20.0% |
| !! | CAAGATAGATATTGTTATAT+TGG | + | chr4_2:14633020-14633039 | None:intergenic | 20.0% |
| !! | AACAAAATGAAGAAAATTGT+CGG | - | chr4_2:14633145-14633164 | Msa0590840:CDS | 20.0% |
| !! | TATGTTAGGAATTTCATTTA+CGG | + | chr4_2:14633274-14633293 | None:intergenic | 20.0% |
| !! | AACATAATTACCTTCATTAT+TGG | + | chr4_2:14633535-14633554 | None:intergenic | 20.0% |
| !! | TTTCTTATAATTATGACTAG+AGG | - | chr4_2:14633770-14633789 | Msa0590840:CDS | 20.0% |
| !! | TTCTTATAATTATGACTAGA+GGG | - | chr4_2:14633771-14633790 | Msa0590840:CDS | 20.0% |
| !! | TTCAAAAGCTTTTACATTTG+TGG | - | chr4_2:14632818-14632837 | Msa0590840:intron | 25.0% |
| !!! | ATTATTTTGTCTGTATCAGT+AGG | + | chr4_2:14632882-14632901 | None:intergenic | 25.0% |
| ! | TGATACAGACAAAATAATGT+TGG | - | chr4_2:14632884-14632903 | Msa0590840:intron | 25.0% |
| ! | TGGTAGGATTATAAATTCAT+TGG | + | chr4_2:14633000-14633019 | None:intergenic | 25.0% |
| ! | AAATTCACATGTTAGAAACA+AGG | - | chr4_2:14633103-14633122 | Msa0590840:CDS | 25.0% |
| !!! | TCATTTTGTTGTGAATCTTT+TGG | + | chr4_2:14633135-14633154 | None:intergenic | 25.0% |
| ! | AAATTCCTAACATACCAATT+AGG | - | chr4_2:14633280-14633299 | Msa0590840:CDS | 25.0% |
| ! | TAGGACTTTATCAAAATCAT+GGG | - | chr4_2:14633448-14633467 | Msa0590840:intron | 25.0% |
| !! | TTCAAAAGCTTTTACATTTG+TGG | - | chr4_2:14632818-14632837 | Msa0590840:intron | 25.0% |
| !!! | ATTATTTTGTCTGTATCAGT+AGG | + | chr4_2:14632882-14632901 | None:intergenic | 25.0% |
| ! | TGATACAGACAAAATAATGT+TGG | - | chr4_2:14632884-14632903 | Msa0590840:intron | 25.0% |
| ! | TGGTAGGATTATAAATTCAT+TGG | + | chr4_2:14633000-14633019 | None:intergenic | 25.0% |
| ! | AAATTCACATGTTAGAAACA+AGG | - | chr4_2:14633103-14633122 | Msa0590840:CDS | 25.0% |
| !!! | TCATTTTGTTGTGAATCTTT+TGG | + | chr4_2:14633135-14633154 | None:intergenic | 25.0% |
| ! | AAATTCCTAACATACCAATT+AGG | - | chr4_2:14633280-14633299 | Msa0590840:CDS | 25.0% |
| ! | TAGGACTTTATCAAAATCAT+GGG | - | chr4_2:14633448-14633467 | Msa0590840:intron | 25.0% |
| ! | ACTCGTTTTATACTTTAGTC+AGG | - | chr4_2:14632717-14632736 | Msa0590840:intron | 30.0% |
| TTATACTTTAGTCAGGATCA+CGG | - | chr4_2:14632724-14632743 | Msa0590840:intron | 30.0% | |
| ! | ATAATGTTGGCTAAACAAAC+CGG | - | chr4_2:14632897-14632916 | Msa0590840:intron | 30.0% |
| CAATATCTATCTTGTGTATC+AGG | - | chr4_2:14633026-14633045 | Msa0590840:CDS | 30.0% | |
| CTAGGACTTTATCAAAATCA+TGG | - | chr4_2:14633447-14633466 | Msa0590840:intron | 30.0% | |
| CTTTATCAAAATCATGGGAT+TGG | - | chr4_2:14633453-14633472 | Msa0590840:intron | 30.0% | |
| !! | TACCTTCATTATTGGTTTCA+AGG | + | chr4_2:14633527-14633546 | None:intergenic | 30.0% |
| GAAGGTAATTATGTTATGAG+TGG | - | chr4_2:14633540-14633559 | Msa0590840:intron | 30.0% | |
| !!! | GTGGTTTTGAATCACAAAAT+AGG | - | chr4_2:14633559-14633578 | Msa0590840:CDS | 30.0% |
| ! | GAATCACAAAATAGGCATTT+TGG | - | chr4_2:14633567-14633586 | Msa0590840:CDS | 30.0% |
| ! | ACTCGTTTTATACTTTAGTC+AGG | - | chr4_2:14632717-14632736 | Msa0590840:intron | 30.0% |
| TTATACTTTAGTCAGGATCA+CGG | - | chr4_2:14632724-14632743 | Msa0590840:intron | 30.0% | |
| ! | ATAATGTTGGCTAAACAAAC+CGG | - | chr4_2:14632897-14632916 | Msa0590840:intron | 30.0% |
| CAATATCTATCTTGTGTATC+AGG | - | chr4_2:14633026-14633045 | Msa0590840:CDS | 30.0% | |
| CTAGGACTTTATCAAAATCA+TGG | - | chr4_2:14633447-14633466 | Msa0590840:intron | 30.0% | |
| CTTTATCAAAATCATGGGAT+TGG | - | chr4_2:14633453-14633472 | Msa0590840:intron | 30.0% | |
| !! | TACCTTCATTATTGGTTTCA+AGG | + | chr4_2:14633527-14633546 | None:intergenic | 30.0% |
| GAAGGTAATTATGTTATGAG+TGG | - | chr4_2:14633540-14633559 | Msa0590840:intron | 30.0% | |
| !!! | GTGGTTTTGAATCACAAAAT+AGG | - | chr4_2:14633559-14633578 | Msa0590840:CDS | 30.0% |
| ! | GAATCACAAAATAGGCATTT+TGG | - | chr4_2:14633567-14633586 | Msa0590840:CDS | 30.0% |
| CAGTTGCATTACATCTATCA+AGG | + | chr4_2:14632767-14632786 | None:intergenic | 35.0% | |
| TTATCGAGATAAAGCTTACC+TGG | + | chr4_2:14632935-14632954 | None:intergenic | 35.0% | |
| TTGTGTATCAGGTGTCAAAT+TGG | - | chr4_2:14633037-14633056 | Msa0590840:CDS | 35.0% | |
| GGTTCATAAATGCAAGAGTA+AGG | - | chr4_2:14633058-14633077 | Msa0590840:CDS | 35.0% | |
| TAAATGCAAGAGTAAGGCTT+TGG | - | chr4_2:14633064-14633083 | Msa0590840:CDS | 35.0% | |
| ATGTGAATTTCTTCCACCAT+TGG | + | chr4_2:14633093-14633112 | None:intergenic | 35.0% | |
| !! | GAAACTAGAGAAGTATCTGA+AGG | + | chr4_2:14633198-14633217 | None:intergenic | 35.0% |
| AACTTATCTGTCGATGTAGA+CGG | + | chr4_2:14633228-14633247 | None:intergenic | 35.0% | |
| TGACTCCTAATTGGTATGTT+AGG | + | chr4_2:14633288-14633307 | None:intergenic | 35.0% | |
| AACATACCAATTAGGAGTCA+AGG | - | chr4_2:14633288-14633307 | Msa0590840:CDS | 35.0% | |
| ! | AAAGGTAGACTCATTTGTTG+TGG | + | chr4_2:14633330-14633349 | None:intergenic | 35.0% |
| ! | AGTCTACCTTTTCAACATGT+AGG | - | chr4_2:14633339-14633358 | Msa0590840:CDS | 35.0% |
| ! | AGTAATGTGTCATTGACACT+AGG | - | chr4_2:14633429-14633448 | Msa0590840:intron | 35.0% |
| CAGTTGCATTACATCTATCA+AGG | + | chr4_2:14632767-14632786 | None:intergenic | 35.0% | |
| TTATCGAGATAAAGCTTACC+TGG | + | chr4_2:14632935-14632954 | None:intergenic | 35.0% | |
| TTGTGTATCAGGTGTCAAAT+TGG | - | chr4_2:14633037-14633056 | Msa0590840:CDS | 35.0% | |
| GGTTCATAAATGCAAGAGTA+AGG | - | chr4_2:14633058-14633077 | Msa0590840:CDS | 35.0% | |
| TAAATGCAAGAGTAAGGCTT+TGG | - | chr4_2:14633064-14633083 | Msa0590840:CDS | 35.0% | |
| ATGTGAATTTCTTCCACCAT+TGG | + | chr4_2:14633093-14633112 | None:intergenic | 35.0% | |
| !! | GAAACTAGAGAAGTATCTGA+AGG | + | chr4_2:14633198-14633217 | None:intergenic | 35.0% |
| AACTTATCTGTCGATGTAGA+CGG | + | chr4_2:14633228-14633247 | None:intergenic | 35.0% | |
| TGACTCCTAATTGGTATGTT+AGG | + | chr4_2:14633288-14633307 | None:intergenic | 35.0% | |
| AACATACCAATTAGGAGTCA+AGG | - | chr4_2:14633288-14633307 | Msa0590840:CDS | 35.0% | |
| ! | AAAGGTAGACTCATTTGTTG+TGG | + | chr4_2:14633330-14633349 | None:intergenic | 35.0% |
| ! | AGTCTACCTTTTCAACATGT+AGG | - | chr4_2:14633339-14633358 | Msa0590840:CDS | 35.0% |
| ! | AGTAATGTGTCATTGACACT+AGG | - | chr4_2:14633429-14633448 | Msa0590840:intron | 35.0% |
| !! | AGTAAGGCTTTGGAAACCAA+TGG | - | chr4_2:14633074-14633093 | Msa0590840:CDS | 40.0% |
| ! | TTCATGATGCCACTTACAAG+CGG | - | chr4_2:14633247-14633266 | Msa0590840:CDS | 40.0% |
| TGTTGTCCTTGACTCCTAAT+TGG | + | chr4_2:14633297-14633316 | None:intergenic | 40.0% | |
| CCAACACCTACATGTTGAAA+AGG | + | chr4_2:14633348-14633367 | None:intergenic | 40.0% | |
| ! | CCTTTTCAACATGTAGGTGT+TGG | - | chr4_2:14633345-14633364 | Msa0590840:CDS | 40.0% |
| ! | GGTGTTGGAATGAACATTGT+TGG | - | chr4_2:14633360-14633379 | Msa0590840:CDS | 40.0% |
| ! | GGAATGAACATTGTTGGTAG+TGG | - | chr4_2:14633366-14633385 | Msa0590840:CDS | 40.0% |
| !! | GTTGGTAGTGGAAGCAATAA+TGG | - | chr4_2:14633378-14633397 | Msa0590840:CDS | 40.0% |
| TGAGCTGCACTTAAAGGAAA+TGG | + | chr4_2:14633489-14633508 | None:intergenic | 40.0% | |
| AATCGTTGAGCTGCACTTAA+AGG | + | chr4_2:14633495-14633514 | None:intergenic | 40.0% | |
| TTAAGTGCAGCTCAACGATT+TGG | - | chr4_2:14633495-14633514 | Msa0590840:intron | 40.0% | |
| GGCCTTGAAACCAATAATGA+AGG | - | chr4_2:14633522-14633541 | Msa0590840:intron | 40.0% | |
| !! | AGTAAGGCTTTGGAAACCAA+TGG | - | chr4_2:14633074-14633093 | Msa0590840:CDS | 40.0% |
| ! | TTCATGATGCCACTTACAAG+CGG | - | chr4_2:14633247-14633266 | Msa0590840:CDS | 40.0% |
| TGTTGTCCTTGACTCCTAAT+TGG | + | chr4_2:14633297-14633316 | None:intergenic | 40.0% | |
| CCAACACCTACATGTTGAAA+AGG | + | chr4_2:14633348-14633367 | None:intergenic | 40.0% | |
| ! | CCTTTTCAACATGTAGGTGT+TGG | - | chr4_2:14633345-14633364 | Msa0590840:CDS | 40.0% |
| ! | GGTGTTGGAATGAACATTGT+TGG | - | chr4_2:14633360-14633379 | Msa0590840:CDS | 40.0% |
| ! | GGAATGAACATTGTTGGTAG+TGG | - | chr4_2:14633366-14633385 | Msa0590840:CDS | 40.0% |
| !! | GTTGGTAGTGGAAGCAATAA+TGG | - | chr4_2:14633378-14633397 | Msa0590840:CDS | 40.0% |
| TGAGCTGCACTTAAAGGAAA+TGG | + | chr4_2:14633489-14633508 | None:intergenic | 40.0% | |
| AATCGTTGAGCTGCACTTAA+AGG | + | chr4_2:14633495-14633514 | None:intergenic | 40.0% | |
| TTAAGTGCAGCTCAACGATT+TGG | - | chr4_2:14633495-14633514 | Msa0590840:intron | 40.0% | |
| GGCCTTGAAACCAATAATGA+AGG | - | chr4_2:14633522-14633541 | Msa0590840:intron | 40.0% | |
| !!! | AGCTTTTGAAGTCACCACCA+CGG | + | chr4_2:14632808-14632827 | None:intergenic | 45.0% |
| ATCAGTAGGATAGCTGCACA+AGG | + | chr4_2:14632868-14632887 | None:intergenic | 45.0% | |
| !! | AAGGCTTTGGAAACCAATGG+TGG | - | chr4_2:14633077-14633096 | Msa0590840:CDS | 45.0% |
| ! | TGTCGATGTAGACGGATTCT+CGG | + | chr4_2:14633220-14633239 | None:intergenic | 45.0% |
| ! | TCATGATGCCACTTACAAGC+GGG | - | chr4_2:14633248-14633267 | Msa0590840:CDS | 45.0% |
| !!! | AGCTTTTGAAGTCACCACCA+CGG | + | chr4_2:14632808-14632827 | None:intergenic | 45.0% |
| ATCAGTAGGATAGCTGCACA+AGG | + | chr4_2:14632868-14632887 | None:intergenic | 45.0% | |
| !! | AAGGCTTTGGAAACCAATGG+TGG | - | chr4_2:14633077-14633096 | Msa0590840:CDS | 45.0% |
| ! | TGTCGATGTAGACGGATTCT+CGG | + | chr4_2:14633220-14633239 | None:intergenic | 45.0% |
| ! | TCATGATGCCACTTACAAGC+GGG | - | chr4_2:14633248-14633267 | Msa0590840:CDS | 45.0% |
| GATCACGGTTGTGTTGCGTT+AGG | - | chr4_2:14632739-14632758 | Msa0590840:intron | 50.0% | |
| AAATGCAGTCGCAATGACCG+TGG | - | chr4_2:14632788-14632807 | Msa0590840:intron | 50.0% | |
| ATTTACGGCCCGCTTGTAAG+TGG | + | chr4_2:14633259-14633278 | None:intergenic | 50.0% | |
| !! | GCAGCTCAACGATTTGGTCT+TGG | - | chr4_2:14633501-14633520 | Msa0590840:intron | 50.0% |
| GATCACGGTTGTGTTGCGTT+AGG | - | chr4_2:14632739-14632758 | Msa0590840:intron | 50.0% | |
| AAATGCAGTCGCAATGACCG+TGG | - | chr4_2:14632788-14632807 | Msa0590840:intron | 50.0% | |
| ATTTACGGCCCGCTTGTAAG+TGG | + | chr4_2:14633259-14633278 | None:intergenic | 50.0% | |
| !! | GCAGCTCAACGATTTGGTCT+TGG | - | chr4_2:14633501-14633520 | Msa0590840:intron | 50.0% |
| TACCTGGCTACGCGATAGAC+CGG | + | chr4_2:14632919-14632938 | None:intergenic | 55.0% | |
| TACCTGGCTACGCGATAGAC+CGG | + | chr4_2:14632919-14632938 | None:intergenic | 55.0% | |
| TGCAGTCGCAATGACCGTGG+TGG | - | chr4_2:14632791-14632810 | Msa0590840:intron | 60.0% | |
| AACCGGTCTATCGCGTAGCC+AGG | - | chr4_2:14632914-14632933 | Msa0590840:intron | 60.0% | |
| TGCAGTCGCAATGACCGTGG+TGG | - | chr4_2:14632791-14632810 | Msa0590840:intron | 60.0% | |
| AACCGGTCTATCGCGTAGCC+AGG | - | chr4_2:14632914-14632933 | Msa0590840:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 14632682 | 14633803 | 14632682 | ID=Msa0590840;Name=Msa0590840 |
| chr4_2 | mRNA | 14632682 | 14633803 | 14632682 | ID=Msa0590840-mRNA-1;Parent=Msa0590840;Name=Msa0590840-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.33|0|0.5|1|1|4|0|214 |
| chr4_2 | exon | 14633730 | 14633803 | 14633730 | ID=Msa0590840-mRNA-1:exon:4198;Parent=Msa0590840-mRNA-1 |
| chr4_2 | exon | 14633550 | 14633610 | 14633550 | ID=Msa0590840-mRNA-1:exon:4197;Parent=Msa0590840-mRNA-1 |
| chr4_2 | exon | 14632942 | 14633437 | 14632942 | ID=Msa0590840-mRNA-1:exon:4196;Parent=Msa0590840-mRNA-1 |
| chr4_2 | exon | 14632682 | 14632695 | 14632682 | ID=Msa0590840-mRNA-1:exon:4195;Parent=Msa0590840-mRNA-1 |
| chr4_2 | CDS | 14633730 | 14633803 | 14633730 | ID=Msa0590840-mRNA-1:cds;Parent=Msa0590840-mRNA-1 |
| chr4_2 | CDS | 14633550 | 14633610 | 14633550 | ID=Msa0590840-mRNA-1:cds;Parent=Msa0590840-mRNA-1 |
| chr4_2 | CDS | 14632942 | 14633437 | 14632942 | ID=Msa0590840-mRNA-1:cds;Parent=Msa0590840-mRNA-1 |
| chr4_2 | CDS | 14632682 | 14632695 | 14632682 | ID=Msa0590840-mRNA-1:cds;Parent=Msa0590840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
