Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042710 | KEH38308.1 | 77.551 | 147 | 7 | 1 | 39 | 159 | 240 | 386 | 2.36e-65 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042710 | sp|B9F3B6|SSDH_ORYSJ | 61.224 | 147 | 31 | 1 | 39 | 159 | 247 | 393 | 6.56e-53 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042710 | A0A072VAA5 | 77.551 | 147 | 7 | 1 | 39 | 159 | 240 | 386 | 1.13e-65 | 218 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0653020 | Msa1042710 | 0.823581 | 1.282698e-53 | -8.615850e-47 |
| Msa0679930 | Msa1042710 | 0.811883 | 5.601454e-51 | -8.615850e-47 |
| Msa0679990 | Msa1042710 | 0.824062 | 9.894374e-54 | -8.615850e-47 |
| Msa0688550 | Msa1042710 | 0.831149 | 1.965726e-55 | -8.615850e-47 |
| Msa0715720 | Msa1042710 | 0.811639 | 6.330433e-51 | -8.615850e-47 |
| Msa0719490 | Msa1042710 | -0.805482 | 1.307114e-49 | -8.615850e-47 |
| Msa0725220 | Msa1042710 | 0.805616 | 1.225108e-49 | -8.615850e-47 |
| Msa0736060 | Msa1042710 | 0.824897 | 6.291008e-54 | -8.615850e-47 |
| Msa0802470 | Msa1042710 | -0.801944 | 7.088326e-49 | -8.615850e-47 |
| Msa0812990 | Msa1042710 | 0.808287 | 3.335409e-50 | -8.615850e-47 |
| Msa0815180 | Msa1042710 | 0.809037 | 2.306668e-50 | -8.615850e-47 |
| Msa0838940 | Msa1042710 | 0.813251 | 2.813660e-51 | -8.615850e-47 |
| Msa0839330 | Msa1042710 | 0.815230 | 1.028126e-51 | -8.615850e-47 |
| Msa0201330 | Msa1042710 | 0.821980 | 3.025160e-53 | -8.615850e-47 |
| Msa0223410 | Msa1042710 | -0.807362 | 5.245946e-50 | -8.615850e-47 |
| Msa0419990 | Msa1042710 | 0.808371 | 3.200021e-50 | -8.615850e-47 |
| Msa0465930 | Msa1042710 | 0.828098 | 1.085832e-54 | -8.615850e-47 |
| Msa0465970 | Msa1042710 | 0.816572 | 5.161658e-52 | -8.615850e-47 |
| Msa0480980 | Msa1042710 | 0.801165 | 1.024206e-48 | -8.615850e-47 |
| Msa0991670 | Msa1042710 | 0.807067 | 6.058173e-50 | -8.615850e-47 |
| Msa1042710 | Msa1076450 | 0.832692 | 8.177238e-56 | -8.615850e-47 |
| Msa1042710 | Msa1083410 | 0.801080 | 1.065687e-48 | -8.615850e-47 |
| Msa1042710 | Msa1102140 | 0.826391 | 2.783806e-54 | -8.615850e-47 |
| Msa1042710 | Msa1177060 | 0.803287 | 3.746439e-49 | -8.615850e-47 |
| Msa1042710 | Msa1222970 | 0.835274 | 1.846042e-56 | -8.615850e-47 |
| Msa1042710 | Msa1228210 | 0.818737 | 1.676914e-52 | -8.615850e-47 |
| Msa1042710 | Msa1252390 | 0.972116 | 3.039352e-134 | -8.615850e-47 |
| Msa1042710 | Msa1271280 | 0.832531 | 8.966096e-56 | -8.615850e-47 |
| Msa1042710 | Msa1296960 | -0.802279 | 6.050225e-49 | -8.615850e-47 |
| Msa1042710 | Msa1324760 | 0.826027 | 3.397494e-54 | -8.615850e-47 |
| Msa1042710 | Msa1324780 | 0.805252 | 1.459913e-49 | -8.615850e-47 |
| Msa1042710 | Msa1347290 | 0.803392 | 3.563135e-49 | -8.615850e-47 |
| Msa1042710 | Msa1367080 | 0.828941 | 6.796071e-55 | -8.615850e-47 |
| Msa1042710 | Msa1371080 | -0.800997 | 1.108536e-48 | -8.615850e-47 |
| Msa1042710 | Msa1378760 | 0.811585 | 6.505402e-51 | -8.615850e-47 |
| Msa1042710 | Msa1411070 | 0.817622 | 2.997926e-52 | -8.615850e-47 |
| Msa1042710 | Msa1438270 | 0.812511 | 4.086197e-51 | -8.615850e-47 |
| Msa1042710 | Msa1464940 | 0.803854 | 2.857259e-49 | -8.615850e-47 |
| Msa0243910 | Msa1042710 | 0.802829 | 4.660131e-49 | -8.615850e-47 |
| Msa0243930 | Msa1042710 | 0.801107 | 1.052374e-48 | -8.615850e-47 |
| Msa0269360 | Msa1042710 | 0.809909 | 1.498446e-50 | -8.615850e-47 |
| Msa0270440 | Msa1042710 | -0.826373 | 2.811577e-54 | -8.615850e-47 |
| Msa0282590 | Msa1042710 | 0.801114 | 1.049181e-48 | -8.615850e-47 |
| Msa0294950 | Msa1042710 | 0.800884 | 1.168845e-48 | -8.615850e-47 |
| Msa0309080 | Msa1042710 | -0.810975 | 8.823655e-51 | -8.615850e-47 |
| Msa0342340 | Msa1042710 | -0.800954 | 1.131097e-48 | -8.615850e-47 |
| Msa0533070 | Msa1042710 | 0.811631 | 6.356239e-51 | -8.615850e-47 |
| Msa0548950 | Msa1042710 | 0.802992 | 4.311120e-49 | -8.615850e-47 |
| Msa0566500 | Msa1042710 | -0.807237 | 5.575064e-50 | -8.615850e-47 |
| Msa0581760 | Msa1042710 | 0.821087 | 4.865295e-53 | -8.615850e-47 |
| Msa0844900 | Msa1042710 | 0.836960 | 6.887810e-57 | -8.615850e-47 |
| Msa0845590 | Msa1042710 | -0.816694 | 4.846276e-52 | -8.615850e-47 |
| Msa0853540 | Msa1042710 | 0.811601 | 6.453244e-51 | -8.615850e-47 |
| Msa0876850 | Msa1042710 | -0.800182 | 1.625143e-48 | -8.615850e-47 |
| Msa0961420 | Msa1042710 | -0.802767 | 4.797677e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042710 | MtrunA17_Chr2g0310091 | 77.551 | 147 | 7 | 1 | 39 | 159 | 255 | 401 | 4.62e-69 | 218 |
| Msa1042710 | MtrunA17_Chr8g0390631 | 41.000 | 100 | 59 | 0 | 60 | 159 | 257 | 356 | 3.05e-20 | 86.3 |
| Msa1042710 | MtrunA17_Chr6g0485301 | 39.796 | 98 | 59 | 0 | 61 | 158 | 266 | 363 | 9.55e-19 | 82.0 |
| Msa1042710 | MtrunA17_Chr4g0059521 | 29.252 | 147 | 78 | 1 | 39 | 159 | 209 | 355 | 6.32e-18 | 79.7 |
| Msa1042710 | MtrunA17_Chr8g0390651 | 39.000 | 100 | 61 | 0 | 60 | 159 | 266 | 365 | 7.24e-18 | 79.7 |
| Msa1042710 | MtrunA17_Chr3g0118081 | 31.293 | 147 | 75 | 1 | 39 | 159 | 239 | 385 | 2.41e-17 | 78.2 |
| Msa1042710 | MtrunA17_Chr3g0118121 | 30.612 | 147 | 76 | 1 | 39 | 159 | 209 | 355 | 1.78e-16 | 75.5 |
| Msa1042710 | MtrunA17_Chr4g0059221 | 33.099 | 142 | 68 | 1 | 39 | 153 | 259 | 400 | 1.31e-14 | 70.1 |
| Msa1042710 | MtrunA17_Chr3g0117861 | 33.099 | 142 | 68 | 1 | 39 | 153 | 257 | 398 | 4.67e-14 | 68.6 |
| Msa1042710 | MtrunA17_Chr6g0485311 | 42.424 | 99 | 57 | 0 | 61 | 159 | 264 | 362 | 1.19e-13 | 67.4 |
| Msa1042710 | MtrunA17_Chr8g0365221 | 29.577 | 142 | 73 | 1 | 39 | 153 | 256 | 397 | 3.67e-12 | 63.2 |
| Msa1042710 | MtrunA17_Chr1g0149961 | 28.472 | 144 | 79 | 2 | 39 | 159 | 216 | 358 | 4.04e-11 | 60.1 |
| Msa1042710 | MtrunA17_Chr4g0074171 | 27.778 | 144 | 80 | 2 | 39 | 159 | 216 | 358 | 7.04e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042710 | AT1G79440.1 | 61.224 | 147 | 31 | 1 | 39 | 159 | 246 | 392 | 1.85e-53 | 177 |
| Msa1042710 | AT3G24503.1 | 39.000 | 100 | 61 | 0 | 60 | 159 | 264 | 363 | 1.65e-18 | 81.6 |
| Msa1042710 | AT3G48170.1 | 37.374 | 99 | 62 | 0 | 61 | 159 | 257 | 355 | 6.22e-18 | 80.1 |
| Msa1042710 | AT1G74920.2 | 30.612 | 147 | 76 | 1 | 39 | 159 | 204 | 350 | 3.92e-16 | 75.1 |
| Msa1042710 | AT1G74920.1 | 30.612 | 147 | 76 | 1 | 39 | 159 | 209 | 355 | 4.37e-16 | 74.7 |
| Msa1042710 | AT3G48000.1 | 40.860 | 93 | 55 | 0 | 61 | 153 | 302 | 394 | 1.17e-14 | 70.9 |
| Msa1042710 | AT1G23800.1 | 37.634 | 93 | 58 | 0 | 61 | 153 | 298 | 390 | 4.84e-13 | 66.2 |
| Msa1042710 | AT2G24270.2 | 28.472 | 144 | 79 | 2 | 39 | 159 | 256 | 398 | 1.56e-12 | 64.7 |
| Msa1042710 | AT2G24270.3 | 28.472 | 144 | 79 | 2 | 39 | 159 | 216 | 358 | 1.68e-12 | 64.7 |
| Msa1042710 | AT2G24270.1 | 28.472 | 144 | 79 | 2 | 39 | 159 | 216 | 358 | 1.68e-12 | 64.7 |
| Msa1042710 | AT2G24270.4 | 28.472 | 144 | 79 | 2 | 39 | 159 | 216 | 358 | 1.76e-12 | 64.3 |
| Msa1042710 | AT1G23800.2 | 42.857 | 77 | 44 | 0 | 61 | 137 | 298 | 374 | 2.28e-12 | 63.9 |
| Msa1042710 | AT1G54100.2 | 34.314 | 102 | 67 | 0 | 58 | 159 | 260 | 361 | 5.71e-12 | 63.2 |
| Msa1042710 | AT1G54100.1 | 34.314 | 102 | 67 | 0 | 58 | 159 | 260 | 361 | 5.71e-12 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGGTGCTACTCGTAAT+TGG | 0.275266 | 7_1:-80855235 | Msa1042710:CDS |
| AATCGCACTTCCCTTCGATT+TGG | 0.284575 | 7_1:-80855252 | Msa1042710:CDS |
| TGCACAAAATTCTCACGTTT+TGG | 0.288056 | 7_1:-80851434 | Msa1042710:three_prime_UTR |
| GAGACGACCTGGAATTGATT+TGG | 0.291099 | 7_1:+80855304 | None:intergenic |
| CACATGTTTGTCCGCTATTA+CGG | 0.300469 | 7_1:+80852575 | None:intergenic |
| AACATAACTAGATCAAATTT+AGG | 0.301558 | 7_1:-80851615 | Msa1042710:intron |
| ATCGCACTTCCCTTCGATTT+GGG | 0.301669 | 7_1:-80855251 | Msa1042710:CDS |
| TTGATCTAGTTATGTTAAAC+TGG | 0.314993 | 7_1:+80851622 | None:intergenic |
| AGACGACCTGGAATTGATTT+GGG | 0.326010 | 7_1:+80855305 | None:intergenic |
| AGTTGAAAGAGGAGAGTGAC+AGG | 0.329567 | 7_1:-80851669 | Msa1042710:three_prime_UTR |
| TTTAAAATTCTAGGTATCTC+TGG | 0.329976 | 7_1:-80853825 | Msa1042710:intron |
| TTTCTTATGTGGAGAGAAAT+TGG | 0.331298 | 7_1:-80851303 | Msa1042710:three_prime_UTR |
| ATGGGACATGCTCCTGATAT+TGG | 0.345256 | 7_1:-80854197 | Msa1042710:CDS |
| AGGGAAGTGCGATTGAGTTC+AGG | 0.348158 | 7_1:+80855261 | None:intergenic |
| GGGTGTTGTGAATGTGGTTA+TGG | 0.352862 | 7_1:-80854216 | Msa1042710:CDS |
| GACCTTAACTCTTGATATCA+AGG | 0.381207 | 7_1:-80851224 | Msa1042710:three_prime_UTR |
| CTCTTTGTTGTTCCCGTCGT+CGG | 0.382885 | 7_1:-80855190 | Msa1042710:CDS |
| TACTCGTAATTGGATCAAAT+TGG | 0.388383 | 7_1:-80855225 | Msa1042710:CDS |
| CAACCCTACACTGATTGAAT+TGG | 0.389944 | 7_1:-80851261 | Msa1042710:three_prime_UTR |
| AATCGATTTCGGAATGGATA+AGG | 0.393065 | 7_1:+80855333 | None:intergenic |
| ATTAAAGCGTCTCCAATATC+AGG | 0.393085 | 7_1:+80854185 | None:intergenic |
| ATATTATTTGGTTGAATGAA+TGG | 0.397786 | 7_1:-80851125 | Msa1042710:three_prime_UTR |
| GTGAAAATTTGTATGAGAGT+TGG | 0.407867 | 7_1:+80855361 | None:intergenic |
| GCAAGACACCAGCTCTTGTT+TGG | 0.410701 | 7_1:+80851454 | None:intergenic |
| ATCCTTGATATCAAGAGTTA+AGG | 0.432723 | 7_1:+80851222 | None:intergenic |
| TGCAAGAAGGTAAGAACAAT+GGG | 0.435486 | 7_1:-80851483 | Msa1042710:three_prime_UTR |
| TACGAGTAGGTGCCGACGAC+GGG | 0.436149 | 7_1:+80855178 | None:intergenic |
| TTTGGGGTGAGAATCGATTT+CGG | 0.441959 | 7_1:+80855322 | None:intergenic |
| TGATTTAGCATCGTGAATCA+AGG | 0.468574 | 7_1:+80851797 | None:intergenic |
| TCTCACCCCAAATCAATTCC+AGG | 0.468964 | 7_1:-80855311 | Msa1042710:five_prime_UTR |
| TTCTCTGCCTTACCAACAAA+AGG | 0.471837 | 7_1:+80851691 | None:intergenic |
| GGGAAGTGCGATTGAGTTCA+GGG | 0.472379 | 7_1:+80855262 | None:intergenic |
| ATCGATTTCGGAATGGATAA+GGG | 0.472415 | 7_1:+80855334 | None:intergenic |
| GGTGTTGTGAATGTGGTTAT+GGG | 0.475898 | 7_1:-80854215 | Msa1042710:CDS |
| AATAGAATTCTTGTGCAAGA+AGG | 0.488408 | 7_1:-80852544 | Msa1042710:intron |
| TGGCTTCAGGGAATAGGGAT+AGG | 0.495330 | 7_1:-80851414 | Msa1042710:three_prime_UTR |
| TACACTGATTGAATTGGCAT+TGG | 0.499282 | 7_1:-80851255 | Msa1042710:three_prime_UTR |
| TTCCTTTCACTGCAACATCC+AGG | 0.503148 | 7_1:+80853759 | None:intergenic |
| TTCTAGGTATCTCTGGAACT+TGG | 0.506384 | 7_1:-80853818 | Msa1042710:intron |
| GATTCACGATGCTAAATCAA+AGG | 0.516164 | 7_1:-80851793 | Msa1042710:intron |
| GATGTAGGGTGTTGTGAATG+TGG | 0.522853 | 7_1:-80854222 | Msa1042710:intron |
| AACAGTATCGAGCAATGCAT+TGG | 0.526355 | 7_1:+80852296 | None:intergenic |
| GAGAAATTGGTGTTATGTTG+TGG | 0.533429 | 7_1:-80851290 | Msa1042710:three_prime_UTR |
| CAGAGTATGAAAGTTGGAGA+TGG | 0.536021 | 7_1:-80852273 | Msa1042710:CDS |
| TAAGGCAGAGAAGTTGAAAG+AGG | 0.537111 | 7_1:-80851680 | Msa1042710:three_prime_UTR |
| GAATGTTACTAAATGCAAGA+AGG | 0.554834 | 7_1:-80851496 | Msa1042710:three_prime_UTR |
| ACTGTTCAGAGTATGAAAGT+TGG | 0.558360 | 7_1:-80852279 | Msa1042710:CDS |
| CACATTACAACAGCTGACAC+AGG | 0.563827 | 7_1:+80851160 | None:intergenic |
| TAGGTATCTCTGGAACTTGG+CGG | 0.565756 | 7_1:-80853815 | Msa1042710:CDS |
| ATGCAAGAAGGTAAGAACAA+TGG | 0.567203 | 7_1:-80851484 | Msa1042710:three_prime_UTR |
| GGAGGGTACCAAACAAGAGC+TGG | 0.568226 | 7_1:-80851462 | Msa1042710:three_prime_UTR |
| ACGAGTAGCACCCAAATCGA+AGG | 0.573294 | 7_1:+80855241 | None:intergenic |
| TCAAGAGTTAAGGTCAAATG+AGG | 0.585953 | 7_1:+80851232 | None:intergenic |
| AATGCCAATTCAATCAGTGT+AGG | 0.589809 | 7_1:+80851257 | None:intergenic |
| TGTATGAGAGTTGGATTGTG+TGG | 0.589899 | 7_1:+80855370 | None:intergenic |
| ATGCCAATTCAATCAGTGTA+GGG | 0.590654 | 7_1:+80851258 | None:intergenic |
| ATCTTGAGTTTGAGACGACC+TGG | 0.597231 | 7_1:+80855293 | None:intergenic |
| GCGATTGAGTTCAGGGAAGG+AGG | 0.602975 | 7_1:+80855269 | None:intergenic |
| GGTGAGAATCGATTTCGGAA+TGG | 0.617154 | 7_1:+80855327 | None:intergenic |
| GACCTGGATGTTGCAGTGAA+AGG | 0.620334 | 7_1:-80853761 | Msa1042710:CDS |
| CGAGTAGCACCCAAATCGAA+GGG | 0.625565 | 7_1:+80855242 | None:intergenic |
| GCAGCAAAGTTCCGTAATAG+CGG | 0.634199 | 7_1:-80852586 | Msa1042710:CDS |
| TTACGAGTAGGTGCCGACGA+CGG | 0.648744 | 7_1:+80855177 | None:intergenic |
| AGTGCGATTGAGTTCAGGGA+AGG | 0.651540 | 7_1:+80855266 | None:intergenic |
| GACGACCTGGAATTGATTTG+GGG | 0.659495 | 7_1:+80855306 | None:intergenic |
| AAGAAGGTAAGAACAATGGG+AGG | 0.660720 | 7_1:-80851480 | Msa1042710:three_prime_UTR |
| ACATTACAACAGCTGACACA+GGG | 0.668437 | 7_1:+80851161 | None:intergenic |
| AGAAGGTAAGAACAATGGGA+GGG | 0.695594 | 7_1:-80851479 | Msa1042710:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATCATTATATTCATA+TGG | - | chr7_1:80852608-80852627 | Msa1042710:intron | 10.0% |
| !! | TTTAAAAAATGCATATATAA+GGG | + | chr7_1:80852642-80852661 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAATGCATATATA+AGG | + | chr7_1:80852643-80852662 | None:intergenic | 10.0% |
| !!! | ATGATTTTCATATAATTATT+TGG | + | chr7_1:80852897-80852916 | None:intergenic | 10.0% |
| !! | ATAATAATAAAATAGAGAGA+GGG | + | chr7_1:80851332-80851351 | None:intergenic | 15.0% |
| !! | AATAATAATAAAATAGAGAG+AGG | + | chr7_1:80851333-80851352 | None:intergenic | 15.0% |
| !!! | ATCTTACTTATTTTTTAACT+AGG | - | chr7_1:80851490-80851509 | Msa1042710:three_prime_UTR | 15.0% |
| !!! | TCTTACTTATTTTTTAACTA+GGG | - | chr7_1:80851491-80851510 | Msa1042710:three_prime_UTR | 15.0% |
| !!! | TATGCATTTTTTAAAATTCT+AGG | - | chr7_1:80852647-80852666 | Msa1042710:intron | 15.0% |
| !!! | ATTTTCATATAATTATTTGG+AGG | + | chr7_1:80852894-80852913 | None:intergenic | 15.0% |
| !! | AAAGAAAAGAAAATAACAAA+AGG | + | chr7_1:80853591-80853610 | None:intergenic | 15.0% |
| !! | AATGCAATAAAAATTGAATT+TGG | - | chr7_1:80853766-80853785 | Msa1042710:CDS | 15.0% |
| !! | ATGCAATAAAAATTGAATTT+GGG | - | chr7_1:80853767-80853786 | Msa1042710:CDS | 15.0% |
| !! | CAATTAGTATTTATAAATTG+GGG | + | chr7_1:80854047-80854066 | None:intergenic | 15.0% |
| !! | CCAATTAGTATTTATAAATT+GGG | + | chr7_1:80854048-80854067 | None:intergenic | 15.0% |
| !! | TCCAATTAGTATTTATAAAT+TGG | + | chr7_1:80854049-80854068 | None:intergenic | 15.0% |
| !! | AAACAAATAATGTATCTAAA+TGG | + | chr7_1:80854099-80854118 | None:intergenic | 15.0% |
| !! | GAATATAAAATATAGTTACA+GGG | + | chr7_1:80854497-80854516 | None:intergenic | 15.0% |
| !! | TGAATATAAAATATAGTTAC+AGG | + | chr7_1:80854498-80854517 | None:intergenic | 15.0% |
| !! | CAAATTAAAGTAAACTAATA+TGG | + | chr7_1:80854894-80854913 | None:intergenic | 15.0% |
| !!! | CATATTAGTTTACTTTAATT+TGG | - | chr7_1:80854892-80854911 | Msa1042710:intron | 15.0% |
| !!! | TTTGTTGTTTTGATATTATT+TGG | - | chr7_1:80855344-80855363 | Msa1042710:five_prime_UTR | 15.0% |
| !!! | TAATTTTTGTTGATTGAGTT+TGG | - | chr7_1:80851537-80851556 | Msa1042710:intron | 20.0% |
| !! | ATCATCAAATAATAAACTTC+AGG | + | chr7_1:80852242-80852261 | None:intergenic | 20.0% |
| !!! | AGTTTATTATTTGATGATGT+AGG | - | chr7_1:80852244-80852263 | Msa1042710:intron | 20.0% |
| !!! | GTTTATTATTTGATGATGTA+GGG | - | chr7_1:80852245-80852264 | Msa1042710:intron | 20.0% |
| !! | TAATTGCTTCTTAATTCAAT+TGG | + | chr7_1:80852344-80852363 | None:intergenic | 20.0% |
| !! | AAGAAATTATAACCTTCTAT+AGG | - | chr7_1:80852392-80852411 | Msa1042710:intron | 20.0% |
| !!! | TTCCTCATTATTTATTTTGT+AGG | - | chr7_1:80852534-80852553 | Msa1042710:intron | 20.0% |
| !!! | TAGTATGTAAATCTTTTTTC+TGG | - | chr7_1:80852961-80852980 | Msa1042710:intron | 20.0% |
| !! | TAACACTAAACAATAGATAT+TGG | - | chr7_1:80853118-80853137 | Msa1042710:intron | 20.0% |
| !! | TAAAAATAAACAAATATGCC+CGG | + | chr7_1:80853328-80853347 | None:intergenic | 20.0% |
| !!! | AAGGTATTTATTTAAGAGTT+GGG | + | chr7_1:80853396-80853415 | None:intergenic | 20.0% |
| !!! | AAAGGTATTTATTTAAGAGT+TGG | + | chr7_1:80853397-80853416 | None:intergenic | 20.0% |
| !!! | TGTTTTGATTTTCAATATAG+AGG | - | chr7_1:80853677-80853696 | Msa1042710:intron | 20.0% |
| !! | TTATTGCATTATTCATCATA+GGG | + | chr7_1:80853756-80853775 | None:intergenic | 20.0% |
| !! | TTTATTGCATTATTCATCAT+AGG | + | chr7_1:80853757-80853776 | None:intergenic | 20.0% |
| !!! | AAAATTGAATTTGGGTTTTT+TGG | - | chr7_1:80853775-80853794 | Msa1042710:CDS | 20.0% |
| !! | CCCAATTTATAAATACTAAT+TGG | - | chr7_1:80854045-80854064 | Msa1042710:intron | 20.0% |
| !! | TAAAAAACACATAAATGTCT+GGG | + | chr7_1:80854760-80854779 | None:intergenic | 20.0% |
| !! | AACATAACTAGATCAAATTT+AGG | - | chr7_1:80854866-80854885 | Msa1042710:intron | 20.0% |
| !! | ATATTATTTGGTTGAATGAA+TGG | - | chr7_1:80855356-80855375 | Msa1042710:five_prime_UTR | 20.0% |
| ! | TTCCTTAATATTGAGTTTGA+AGG | - | chr7_1:80851669-80851688 | Msa1042710:three_prime_UTR | 25.0% |
| !! | AAGACTTGTGTATTTGAAAT+GGG | + | chr7_1:80852067-80852086 | None:intergenic | 25.0% |
| ! | AAAGACTTGTGTATTTGAAA+TGG | + | chr7_1:80852068-80852087 | None:intergenic | 25.0% |
| ! | TACATAATGTAAATCTGAAG+TGG | - | chr7_1:80852129-80852148 | Msa1042710:intron | 25.0% |
| ! | ATTATAACCTTCTATAGGTA+AGG | - | chr7_1:80852397-80852416 | Msa1042710:intron | 25.0% |
| !!! | CTCTTAATTTTAACCACATT+TGG | - | chr7_1:80852504-80852523 | Msa1042710:intron | 25.0% |
| ! | AGCCTACAAAATAAATAATG+AGG | + | chr7_1:80852539-80852558 | None:intergenic | 25.0% |
| ! | AAATCAACATAGGAAATCTA+TGG | + | chr7_1:80852572-80852591 | None:intergenic | 25.0% |
| ! | CATTGAGAAAAAATCAACAT+AGG | + | chr7_1:80852582-80852601 | None:intergenic | 25.0% |
| !! | TTTAAAATTCTAGGTATCTC+TGG | - | chr7_1:80852656-80852675 | Msa1042710:intron | 25.0% |
| ! | GGAGTTATCATAAAAAATTC+GGG | + | chr7_1:80852838-80852857 | None:intergenic | 25.0% |
| ! | CGGAGTTATCATAAAAAATT+CGG | + | chr7_1:80852839-80852858 | None:intergenic | 25.0% |
| !!! | AATTTTAGAAGTGAATGTTC+TGG | - | chr7_1:80853181-80853200 | Msa1042710:intron | 25.0% |
| ! | AAAAATAAACAAATATGCCC+GGG | + | chr7_1:80853327-80853346 | None:intergenic | 25.0% |
| !! | GTTATAATTGAACTACCTTT+TGG | - | chr7_1:80853562-80853581 | Msa1042710:intron | 25.0% |
| ! | AATAACAAAAGGTTACCAAA+AGG | + | chr7_1:80853580-80853599 | None:intergenic | 25.0% |
| ! | AAGAGAAAAGATCTACAAAT+TGG | + | chr7_1:80853614-80853633 | None:intergenic | 25.0% |
| ! | TTTGGTAAAATTGAAAGTTG+AGG | - | chr7_1:80853793-80853812 | Msa1042710:CDS | 25.0% |
| ! | TATTTAACCAATTCATGTGA+AGG | - | chr7_1:80854145-80854164 | Msa1042710:intron | 25.0% |
| ! | ATATATACCTTCACATGAAT+TGG | + | chr7_1:80854155-80854174 | None:intergenic | 25.0% |
| !!! | TCACAAATATAGAGTACTTT+TGG | - | chr7_1:80854357-80854376 | Msa1042710:intron | 25.0% |
| ! | TATAAAATATAGTTACAGGG+TGG | + | chr7_1:80854494-80854513 | None:intergenic | 25.0% |
| ! | CTAAAAAACACATAAATGTC+TGG | + | chr7_1:80854761-80854780 | None:intergenic | 25.0% |
| !!! | CAGACATTTATGTGTTTTTT+AGG | - | chr7_1:80854759-80854778 | Msa1042710:intron | 25.0% |
| !!! | TTTATGTGTTTTTTAGGACT+AGG | - | chr7_1:80854765-80854784 | Msa1042710:intron | 25.0% |
| ! | TTGATCTAGTTATGTTAAAC+TGG | + | chr7_1:80854862-80854881 | None:intergenic | 25.0% |
| !!! | TCATGTATTTGATTTGATGA+CGG | - | chr7_1:80854925-80854944 | Msa1042710:intron | 25.0% |
| !! | TAGTTATAGCAGAACATTTT+TGG | - | chr7_1:80854952-80854971 | Msa1042710:intron | 25.0% |
| !! | AGTTATAGCAGAACATTTTT+GGG | - | chr7_1:80854953-80854972 | Msa1042710:intron | 25.0% |
| GTGAAAATTTGTATGAGAGT+TGG | + | chr7_1:80851123-80851142 | None:intergenic | 30.0% | |
| TACTCGTAATTGGATCAAAT+TGG | - | chr7_1:80851256-80851275 | Msa1042710:three_prime_UTR | 30.0% | |
| !!! | TTTGATTTTGCGGTTTTGAA+CGG | - | chr7_1:80851462-80851481 | Msa1042710:three_prime_UTR | 30.0% |
| ! | TTTGTTGATTGAGTTTGGTT+AGG | - | chr7_1:80851542-80851561 | Msa1042710:intron | 30.0% |
| !! | TCGTTGATTTCGAATGAATT+TGG | - | chr7_1:80851630-80851649 | Msa1042710:three_prime_UTR | 30.0% |
| ATTGAAGTTGCTAACATTCT+AGG | - | chr7_1:80851753-80851772 | Msa1042710:intron | 30.0% | |
| TTTGTGTTAAACAGAGAAAG+AGG | - | chr7_1:80851806-80851825 | Msa1042710:CDS | 30.0% | |
| GTTAGTAAGAGATACAATCA+AGG | + | chr7_1:80852018-80852037 | None:intergenic | 30.0% | |
| TCATACTGTAGTATACATTG+TGG | - | chr7_1:80852040-80852059 | Msa1042710:intron | 30.0% | |
| TAGAATGCATTTAACGTTCA+TGG | - | chr7_1:80852102-80852121 | Msa1042710:intron | 30.0% | |
| ! | AGATACTAAGTTGGATTCTT+AGG | - | chr7_1:80852163-80852182 | Msa1042710:intron | 30.0% |
| GATGTTCAGTTGCATTTAAA+GGG | + | chr7_1:80852367-80852386 | None:intergenic | 30.0% | |
| AGATGTTCAGTTGCATTTAA+AGG | + | chr7_1:80852368-80852387 | None:intergenic | 30.0% | |
| TAAATGCAACTGAACATCTA+AGG | - | chr7_1:80852369-80852388 | Msa1042710:intron | 30.0% | |
| TAATCTTCCTTACCTATAGA+AGG | + | chr7_1:80852407-80852426 | None:intergenic | 30.0% | |
| TCTGTAAGCTGTTATTATAC+AGG | - | chr7_1:80852793-80852812 | Msa1042710:intron | 30.0% | |
| CTGTAAGCTGTTATTATACA+GGG | - | chr7_1:80852794-80852813 | Msa1042710:intron | 30.0% | |
| ! | TTTTTATGATAACTCCGTTG+TGG | - | chr7_1:80852842-80852861 | Msa1042710:intron | 30.0% |
| AATACGAGTATTATCCACAA+CGG | + | chr7_1:80852859-80852878 | None:intergenic | 30.0% | |
| ATTAATCCAATGCTGAAAAG+TGG | - | chr7_1:80852931-80852950 | Msa1042710:intron | 30.0% | |
| TAGACATAAACTTCCATTTC+TGG | + | chr7_1:80853075-80853094 | None:intergenic | 30.0% | |
| ! | CTGCGATTAAATTTGAAACT+AGG | + | chr7_1:80853217-80853236 | None:intergenic | 30.0% |
| AGAACATTCACTGTTATTCT+AGG | + | chr7_1:80853300-80853319 | None:intergenic | 30.0% | |
| TAGAATAACAGTGAATGTTC+TGG | - | chr7_1:80853299-80853318 | Msa1042710:intron | 30.0% | |
| ! | CACAAGTTTGACTAGTTAAA+AGG | + | chr7_1:80853415-80853434 | None:intergenic | 30.0% |
| AATAGAATTCTTGTGCAAGA+AGG | - | chr7_1:80853937-80853956 | Msa1042710:intron | 30.0% | |
| TTGTTGGCATAAAGGAAATA+CGG | + | chr7_1:80854282-80854301 | None:intergenic | 30.0% | |
| TATTTCCTTTATGCCAACAA+TGG | - | chr7_1:80854282-80854301 | Msa1042710:intron | 30.0% | |
| AATTTCCATTGTTGGCATAA+AGG | + | chr7_1:80854290-80854309 | None:intergenic | 30.0% | |
| ATTTAGGCAATTTCCATTGT+TGG | + | chr7_1:80854298-80854317 | None:intergenic | 30.0% | |
| !! | GAGATAGCTCTAGAAAAATA+GGG | + | chr7_1:80854431-80854450 | None:intergenic | 30.0% |
| !! | AGAGATAGCTCTAGAAAAAT+AGG | + | chr7_1:80854432-80854451 | None:intergenic | 30.0% |
| CAATGAAGCTACTGTAAAAA+AGG | - | chr7_1:80854540-80854559 | Msa1042710:intron | 30.0% | |
| ! | ATTTTCTATATGCACCGTTA+CGG | - | chr7_1:80854591-80854610 | Msa1042710:intron | 30.0% |
| AAAATCATAAGCAAACCAAG+AGG | + | chr7_1:80854649-80854668 | None:intergenic | 30.0% | |
| ! | TTGCTTATGATTTTCCTTAC+AGG | - | chr7_1:80854655-80854674 | Msa1042710:intron | 30.0% |
| GAATGTTACTAAATGCAAGA+AGG | - | chr7_1:80854985-80855004 | Msa1042710:intron | 30.0% | |
| TTTCTTATGTGGAGAGAAAT+TGG | - | chr7_1:80855178-80855197 | Msa1042710:intron | 30.0% | |
| ATCCTTGATATCAAGAGTTA+AGG | + | chr7_1:80855262-80855281 | None:intergenic | 30.0% | |
| ! | ATCGATTTCGGAATGGATAA+GGG | + | chr7_1:80851150-80851169 | None:intergenic | 35.0% |
| ! | AATCGATTTCGGAATGGATA+AGG | + | chr7_1:80851151-80851170 | None:intergenic | 35.0% |
| !! | ACGAGCTAGATTTGATTTTG+CGG | - | chr7_1:80851452-80851471 | Msa1042710:three_prime_UTR | 35.0% |
| ATTGAGTTTGGTTAGGAGAA+AGG | - | chr7_1:80851549-80851568 | Msa1042710:intron | 35.0% | |
| TTGAGTTTGGTTAGGAGAAA+GGG | - | chr7_1:80851550-80851569 | Msa1042710:intron | 35.0% | |
| CGCCTTCAAACTCAATATTA+AGG | + | chr7_1:80851674-80851693 | None:intergenic | 35.0% | |
| !! | TGTACATTTTCAAGCTTGGA+TGG | + | chr7_1:80851888-80851907 | None:intergenic | 35.0% |
| !! | CAGATGTACATTTTCAAGCT+TGG | + | chr7_1:80851892-80851911 | None:intergenic | 35.0% |
| CAAGCTTGAAAATGTACATC+TGG | - | chr7_1:80851890-80851909 | Msa1042710:intron | 35.0% | |
| ! | ATTAAAGCGTCTCCAATATC+AGG | + | chr7_1:80852299-80852318 | None:intergenic | 35.0% |
| ! | TCAATTGGTGATAGAACTTG+TGG | + | chr7_1:80852329-80852348 | None:intergenic | 35.0% |
| GTAAGGAAGATTACATTCAC+TGG | - | chr7_1:80852414-80852433 | Msa1042710:intron | 35.0% | |
| GAGGAAACAAATACCAAATG+TGG | + | chr7_1:80852520-80852539 | None:intergenic | 35.0% | |
| ATTTCCTACAAGAACTGCTA+GGG | + | chr7_1:80853049-80853068 | None:intergenic | 35.0% | |
| TGTAGGAAATCTACCAGAAA+TGG | - | chr7_1:80853059-80853078 | Msa1042710:intron | 35.0% | |
| GGAAGTTTATGTCTATGTGT+TGG | - | chr7_1:80853080-80853099 | Msa1042710:intron | 35.0% | |
| ! | TATGTGTTGGTATCAATGTG+AGG | - | chr7_1:80853093-80853112 | Msa1042710:intron | 35.0% |
| ! | ATGTGTTGGTATCAATGTGA+GGG | - | chr7_1:80853094-80853113 | Msa1042710:intron | 35.0% |
| ! | AAATTTGAAACTAGGACGTG+CGG | + | chr7_1:80853209-80853228 | None:intergenic | 35.0% |
| TATTTAAGAGTTGGGCTGAT+TGG | + | chr7_1:80853388-80853407 | None:intergenic | 35.0% | |
| CATTATGTAGCATCTTCAGT+TGG | - | chr7_1:80853450-80853469 | Msa1042710:intron | 35.0% | |
| GGATTGAATGTGTAGATATG+TGG | - | chr7_1:80853698-80853717 | Msa1042710:intron | 35.0% | |
| TGAATGTGTAGATATGTGGT+TGG | - | chr7_1:80853702-80853721 | Msa1042710:intron | 35.0% | |
| GAATGTGTAGATATGTGGTT+GGG | - | chr7_1:80853703-80853722 | Msa1042710:intron | 35.0% | |
| ! | TGTGAATTTAGGATTCTCTC+AGG | - | chr7_1:80853823-80853842 | Msa1042710:intron | 35.0% |
| AAACAGTCAAACAGAGTTTG+GGG | + | chr7_1:80854014-80854033 | None:intergenic | 35.0% | |
| CAAACAGTCAAACAGAGTTT+GGG | + | chr7_1:80854015-80854034 | None:intergenic | 35.0% | |
| ACAAACAGTCAAACAGAGTT+TGG | + | chr7_1:80854016-80854035 | None:intergenic | 35.0% | |
| ACTGTTCAGAGTATGAAAGT+TGG | - | chr7_1:80854202-80854221 | Msa1042710:CDS | 35.0% | |
| ! | ATGGTGATGCAATGCAATTT+AGG | + | chr7_1:80854314-80854333 | None:intergenic | 35.0% |
| CACATACTGAGTGAGAAAAA+TGG | + | chr7_1:80854333-80854352 | None:intergenic | 35.0% | |
| ! | TTTTCTATATGCACCGTTAC+GGG | - | chr7_1:80854592-80854611 | Msa1042710:intron | 35.0% |
| ! | CTTATGATTTTCCTTACAGG+TGG | - | chr7_1:80854658-80854677 | Msa1042710:intron | 35.0% |
| TGATTTAGCATCGTGAATCA+AGG | + | chr7_1:80854687-80854706 | None:intergenic | 35.0% | |
| GATTCACGATGCTAAATCAA+AGG | - | chr7_1:80854688-80854707 | Msa1042710:intron | 35.0% | |
| GACTGGTAGAATAGAAAAGA+TGG | + | chr7_1:80854718-80854737 | None:intergenic | 35.0% | |
| AAAACACATAAATGTCTGGG+AGG | + | chr7_1:80854757-80854776 | None:intergenic | 35.0% | |
| !!! | GAACATTTTTGGGTCACATT+TGG | - | chr7_1:80854963-80854982 | Msa1042710:intron | 35.0% |
| ATGCAAGAAGGTAAGAACAA+TGG | - | chr7_1:80854997-80855016 | Msa1042710:intron | 35.0% | |
| TGCAAGAAGGTAAGAACAAT+GGG | - | chr7_1:80854998-80855017 | Msa1042710:intron | 35.0% | |
| ! | TGCACAAAATTCTCACGTTT+TGG | - | chr7_1:80855047-80855066 | Msa1042710:intron | 35.0% |
| !! | GAGAAATTGGTGTTATGTTG+TGG | - | chr7_1:80855191-80855210 | Msa1042710:CDS | 35.0% |
| ATGCCAATTCAATCAGTGTA+GGG | + | chr7_1:80855226-80855245 | None:intergenic | 35.0% | |
| AATGCCAATTCAATCAGTGT+AGG | + | chr7_1:80855227-80855246 | None:intergenic | 35.0% | |
| ! | TACACTGATTGAATTGGCAT+TGG | - | chr7_1:80855226-80855245 | Msa1042710:CDS | 35.0% |
| TCAAGAGTTAAGGTCAAATG+AGG | + | chr7_1:80855252-80855271 | None:intergenic | 35.0% | |
| GACCTTAACTCTTGATATCA+AGG | - | chr7_1:80855257-80855276 | Msa1042710:CDS | 35.0% | |
| TGTATGAGAGTTGGATTGTG+TGG | + | chr7_1:80851114-80851133 | None:intergenic | 40.0% | |
| ! | TTTGGGGTGAGAATCGATTT+CGG | + | chr7_1:80851162-80851181 | None:intergenic | 40.0% |
| ! | AGACGACCTGGAATTGATTT+GGG | + | chr7_1:80851179-80851198 | None:intergenic | 40.0% |
| !! | ATTTGGGTGCTACTCGTAAT+TGG | - | chr7_1:80851246-80851265 | Msa1042710:three_prime_UTR | 40.0% |
| !!! | TTTTGCGGTTTTGAACGGTT+TGG | - | chr7_1:80851467-80851486 | Msa1042710:three_prime_UTR | 40.0% |
| TCGTCCATTGTCTATGTATG+TGG | - | chr7_1:80851711-80851730 | Msa1042710:intron | 40.0% | |
| TCCATTGTCTATGTATGTGG+TGG | - | chr7_1:80851714-80851733 | Msa1042710:intron | 40.0% | |
| ACCACCACATACATAGACAA+TGG | + | chr7_1:80851718-80851737 | None:intergenic | 40.0% | |
| GAGGAAGAGAAAGCTTCTTT+CGG | - | chr7_1:80851825-80851844 | Msa1042710:intron | 40.0% | |
| AGAAAGCTTCTTTCGGTGAT+TGG | - | chr7_1:80851832-80851851 | Msa1042710:intron | 40.0% | |
| CTGTCGAAGAGATACTAAGT+TGG | - | chr7_1:80852154-80852173 | Msa1042710:intron | 40.0% | |
| ! | GGTGTTGTGAATGTGGTTAT+GGG | - | chr7_1:80852266-80852285 | Msa1042710:CDS | 40.0% |
| !! | GATTACATTCACTGGCTCAA+CGG | - | chr7_1:80852422-80852441 | Msa1042710:intron | 40.0% |
| GGCTGTTGGAAAGAAATTGA+TGG | - | chr7_1:80852443-80852462 | Msa1042710:intron | 40.0% | |
| ! | GTTGGAAAGAAATTGATGGC+AGG | - | chr7_1:80852447-80852466 | Msa1042710:intron | 40.0% |
| !! | TTCTAGGTATCTCTGGAACT+TGG | - | chr7_1:80852663-80852682 | Msa1042710:intron | 40.0% |
| GCATCGTCAAAAACTATGCA+TGG | + | chr7_1:80852699-80852718 | None:intergenic | 40.0% | |
| CAATGCTGAAAAGTGGATGA+GGG | - | chr7_1:80852938-80852957 | Msa1042710:intron | 40.0% | |
| ! | CTCCATGTTTTTCTTCTGCA+AGG | - | chr7_1:80852998-80853017 | Msa1042710:intron | 40.0% |
| GTCCTTGCAGAAGAAAAACA+TGG | + | chr7_1:80853003-80853022 | None:intergenic | 40.0% | |
| TTTCCTACAAGAACTGCTAG+GGG | + | chr7_1:80853048-80853067 | None:intergenic | 40.0% | |
| GATTTCCTACAAGAACTGCT+AGG | + | chr7_1:80853050-80853069 | None:intergenic | 40.0% | |
| !! | ATTGGTGTTAGCTTGTTTGC+TGG | - | chr7_1:80853136-80853155 | Msa1042710:intron | 40.0% |
| !! | TTGGTGTTAGCTTGTTTGCT+GGG | - | chr7_1:80853137-80853156 | Msa1042710:intron | 40.0% |
| TCAAATTTAATCGCAGCTGC+TGG | - | chr7_1:80853221-80853240 | Msa1042710:intron | 40.0% | |
| CTGATTGGCACTGTTATTCT+AGG | + | chr7_1:80853373-80853392 | None:intergenic | 40.0% | |
| GAGGTGCATGTTGTGAATTT+AGG | - | chr7_1:80853812-80853831 | Msa1042710:CDS | 40.0% | |
| TACTAGTTGACCAAAGCAGA+AGG | + | chr7_1:80853849-80853868 | None:intergenic | 40.0% | |
| CACATGTTTGTCCGCTATTA+CGG | + | chr7_1:80853909-80853928 | None:intergenic | 40.0% | |
| ! | AACAGTATCGAGCAATGCAT+TGG | + | chr7_1:80854188-80854207 | None:intergenic | 40.0% |
| CAGAGTATGAAAGTTGGAGA+TGG | - | chr7_1:80854208-80854227 | Msa1042710:CDS | 40.0% | |
| !!! | GTTGGAGATGGTTTTAGTGA+AGG | - | chr7_1:80854220-80854239 | Msa1042710:intron | 40.0% |
| !! | TTTTAGTGAAGGTGTAGCTC+AGG | - | chr7_1:80854231-80854250 | Msa1042710:intron | 40.0% |
| TTTCTATATGCACCGTTACG+GGG | - | chr7_1:80854593-80854612 | Msa1042710:intron | 40.0% | |
| ! | TATAAGTTTCCACGAGTTGG+AGG | + | chr7_1:80854624-80854643 | None:intergenic | 40.0% |
| GCATATAAGTTTCCACGAGT+TGG | + | chr7_1:80854627-80854646 | None:intergenic | 40.0% | |
| GTGGAAACTTATATGCCTCT+TGG | - | chr7_1:80854631-80854650 | Msa1042710:intron | 40.0% | |
| AATCAAGGATTCCACCTGTA+AGG | + | chr7_1:80854672-80854691 | None:intergenic | 40.0% | |
| GATGAAATGGAGAATCAGAC+TGG | + | chr7_1:80854735-80854754 | None:intergenic | 40.0% | |
| AAATGTCTGGGAGGATGAAA+TGG | + | chr7_1:80854748-80854767 | None:intergenic | 40.0% | |
| TTCTCTGCCTTACCAACAAA+AGG | + | chr7_1:80854793-80854812 | None:intergenic | 40.0% | |
| TAAGGCAGAGAAGTTGAAAG+AGG | - | chr7_1:80854801-80854820 | Msa1042710:intron | 40.0% | |
| AAGAAGGTAAGAACAATGGG+AGG | - | chr7_1:80855001-80855020 | Msa1042710:intron | 40.0% | |
| AGAAGGTAAGAACAATGGGA+GGG | - | chr7_1:80855002-80855021 | Msa1042710:intron | 40.0% | |
| !!! | AATTCTCACGTTTTGGCTTC+AGG | - | chr7_1:80855054-80855073 | Msa1042710:intron | 40.0% |
| !!! | ATTCTCACGTTTTGGCTTCA+GGG | - | chr7_1:80855055-80855074 | Msa1042710:intron | 40.0% |
| !! | CGCGTGTTTGTTTTCTTATG+TGG | - | chr7_1:80855167-80855186 | Msa1042710:intron | 40.0% |
| ! | CAACCCTACACTGATTGAAT+TGG | - | chr7_1:80855220-80855239 | Msa1042710:CDS | 40.0% |
| ACATTACAACAGCTGACACA+GGG | + | chr7_1:80855323-80855342 | None:intergenic | 40.0% | |
| ! | GGTGAGAATCGATTTCGGAA+TGG | + | chr7_1:80851157-80851176 | None:intergenic | 45.0% |
| TCTCACCCCAAATCAATTCC+AGG | - | chr7_1:80851170-80851189 | Msa1042710:three_prime_UTR | 45.0% | |
| !! | GACGACCTGGAATTGATTTG+GGG | + | chr7_1:80851178-80851197 | None:intergenic | 45.0% |
| GAGACGACCTGGAATTGATT+TGG | + | chr7_1:80851180-80851199 | None:intergenic | 45.0% | |
| ! | ATCTTGAGTTTGAGACGACC+TGG | + | chr7_1:80851191-80851210 | None:intergenic | 45.0% |
| AATCGCACTTCCCTTCGATT+TGG | - | chr7_1:80851229-80851248 | Msa1042710:three_prime_UTR | 45.0% | |
| ATCGCACTTCCCTTCGATTT+GGG | - | chr7_1:80851230-80851249 | Msa1042710:three_prime_UTR | 45.0% | |
| AGAGAGAGGGAATTACGAGT+AGG | + | chr7_1:80851319-80851338 | None:intergenic | 45.0% | |
| ! | TGTATGTGGTGGTGCTTCAT+AGG | - | chr7_1:80851725-80851744 | Msa1042710:intron | 45.0% |
| ! | ACATCTGGAGCTTACTTGTG+AGG | - | chr7_1:80851905-80851924 | Msa1042710:intron | 45.0% |
| !! | GATGTAGGGTGTTGTGAATG+TGG | - | chr7_1:80852259-80852278 | Msa1042710:CDS | 45.0% |
| ! | GGGTGTTGTGAATGTGGTTA+TGG | - | chr7_1:80852265-80852284 | Msa1042710:CDS | 45.0% |
| ATGGGACATGCTCCTGATAT+TGG | - | chr7_1:80852284-80852303 | Msa1042710:CDS | 45.0% | |
| !! | TAGGTATCTCTGGAACTTGG+CGG | - | chr7_1:80852666-80852685 | Msa1042710:intron | 45.0% |
| ! | AGTTTTTGACGATGCTGACC+TGG | - | chr7_1:80852704-80852723 | Msa1042710:intron | 45.0% |
| TTCCTTTCACTGCAACATCC+AGG | + | chr7_1:80852725-80852744 | None:intergenic | 45.0% | |
| !! | CCTCATCCACTTTTCAGCAT+TGG | + | chr7_1:80852940-80852959 | None:intergenic | 45.0% |
| CCAATGCTGAAAAGTGGATG+AGG | - | chr7_1:80852937-80852956 | Msa1042710:intron | 45.0% | |
| AAACCCCTAGCAGTTCTTGT+AGG | - | chr7_1:80853042-80853061 | Msa1042710:intron | 45.0% | |
| !! | ACAGTGAATGTTCTGGTTCC+CGG | - | chr7_1:80853306-80853325 | Msa1042710:intron | 45.0% |
| TGGTTGGGACAATTCAGCAT+GGG | - | chr7_1:80853718-80853737 | Msa1042710:intron | 45.0% | |
| GCAGCAAAGTTCCGTAATAG+CGG | - | chr7_1:80853895-80853914 | Msa1042710:intron | 45.0% | |
| AGTCAAACAGAGTTTGGGGA+TGG | + | chr7_1:80854010-80854029 | None:intergenic | 45.0% | |
| ! | TAGGACTAGGCTCCTTTTGT+TGG | - | chr7_1:80854778-80854797 | Msa1042710:intron | 45.0% |
| ! | CTAGGCTCCTTTTGTTGGTA+AGG | - | chr7_1:80854783-80854802 | Msa1042710:intron | 45.0% |
| AGTTGAAAGAGGAGAGTGAC+AGG | - | chr7_1:80854812-80854831 | Msa1042710:intron | 45.0% | |
| !!! | ACGTTTTGGCTTCAGGGAAT+AGG | - | chr7_1:80855061-80855080 | Msa1042710:intron | 45.0% |
| !!! | CGTTTTGGCTTCAGGGAATA+GGG | - | chr7_1:80855062-80855081 | Msa1042710:intron | 45.0% |
| CACATTACAACAGCTGACAC+AGG | + | chr7_1:80855324-80855343 | None:intergenic | 45.0% | |
| !!! | ATATAAAAATTATGATATTT+TGG | - | chr7_1:80851931-80851950 | Msa1042710:intron | 5.0% |
| AGTGCGATTGAGTTCAGGGA+AGG | + | chr7_1:80851218-80851237 | None:intergenic | 50.0% | |
| ! | GGGAAGTGCGATTGAGTTCA+GGG | + | chr7_1:80851222-80851241 | None:intergenic | 50.0% |
| ! | AGGGAAGTGCGATTGAGTTC+AGG | + | chr7_1:80851223-80851242 | None:intergenic | 50.0% |
| CGAGTAGCACCCAAATCGAA+GGG | + | chr7_1:80851242-80851261 | None:intergenic | 50.0% | |
| ACGAGTAGCACCCAAATCGA+AGG | + | chr7_1:80851243-80851262 | None:intergenic | 50.0% | |
| !! | CTCTTTGTTGTTCCCGTCGT+CGG | - | chr7_1:80851291-80851310 | Msa1042710:three_prime_UTR | 50.0% |
| ! | GATGGCAGGTTTTGCTGAGA+TGG | - | chr7_1:80852461-80852480 | Msa1042710:intron | 50.0% |
| GACCTGGATGTTGCAGTGAA+AGG | - | chr7_1:80852720-80852739 | Msa1042710:intron | 50.0% | |
| !!! | CAGCTGCTGGTTTTGTCTGA+GGG | - | chr7_1:80853234-80853253 | Msa1042710:intron | 50.0% |
| !!! | AGCTGCTGGTTTTGTCTGAG+GGG | - | chr7_1:80853235-80853254 | Msa1042710:intron | 50.0% |
| !! | CAGTGAATGTTCTGGTTCCC+GGG | - | chr7_1:80853307-80853326 | Msa1042710:intron | 50.0% |
| GTGGTTGGGACAATTCAGCA+TGG | - | chr7_1:80853717-80853736 | Msa1042710:intron | 50.0% | |
| TTCTCTCAGGCCTTCTGCTT+TGG | - | chr7_1:80853836-80853855 | Msa1042710:intron | 50.0% | |
| ! | AGTGAAGGTGTAGCTCAGGT+AGG | - | chr7_1:80854235-80854254 | Msa1042710:intron | 50.0% |
| TTGGAGGAGAATCCCCGTAA+CGG | + | chr7_1:80854608-80854627 | None:intergenic | 50.0% | |
| GCAAGACACCAGCTCTTGTT+TGG | + | chr7_1:80855030-80855049 | None:intergenic | 50.0% | |
| TGGCTTCAGGGAATAGGGAT+AGG | - | chr7_1:80855067-80855086 | Msa1042710:intron | 50.0% | |
| GCGATTGAGTTCAGGGAAGG+AGG | + | chr7_1:80851215-80851234 | None:intergenic | 55.0% | |
| !! | TTACGAGTAGGTGCCGACGA+CGG | + | chr7_1:80851307-80851326 | None:intergenic | 55.0% |
| !! | TTCACTGGCTCAACGGCTGT+TGG | - | chr7_1:80852429-80852448 | Msa1042710:intron | 55.0% |
| ! | AGCTTGTTTGCTGGGCTTGC+TGG | - | chr7_1:80853145-80853164 | Msa1042710:intron | 55.0% |
| ! | GCTTGTTTGCTGGGCTTGCT+GGG | - | chr7_1:80853146-80853165 | Msa1042710:intron | 55.0% |
| !!! | GCAGCTGCTGGTTTTGTCTG+AGG | - | chr7_1:80853233-80853252 | Msa1042710:intron | 55.0% |
| TTGCTGCAAGCTGCACACAC+AGG | + | chr7_1:80853882-80853901 | None:intergenic | 55.0% | |
| !! | GGAGGGTACCAAACAAGAGC+TGG | - | chr7_1:80855019-80855038 | Msa1042710:intron | 55.0% |
| !! | TACGAGTAGGTGCCGACGAC+GGG | + | chr7_1:80851306-80851325 | None:intergenic | 60.0% |
| !! | TTTGCTGGGCTTGCTGGGCT+AGG | - | chr7_1:80853151-80853170 | Msa1042710:intron | 60.0% |
| GGGGATTCTCCTCCAACTCG+TGG | - | chr7_1:80854612-80854631 | Msa1042710:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 80851111 | 80855392 | 80851111 | ID=Msa1042710;Name=Msa1042710 |
| chr7_1 | mRNA | 80851111 | 80855392 | 80851111 | ID=Msa1042710-mRNA-1;Parent=Msa1042710;Name=Msa1042710-mRNA-1;_AED=0.30;_eAED=0.30;_QI=98|0.87|1|1|0.75|0.77|9|530|160 |
| chr7_1 | exon | 80851111 | 80851539 | 80851111 | ID=Msa1042710-mRNA-1:exon:22064;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80851616 | 80851722 | 80851616 | ID=Msa1042710-mRNA-1:exon:22063;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80851794 | 80851826 | 80851794 | ID=Msa1042710-mRNA-1:exon:22062;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80851942 | 80851974 | 80851942 | ID=Msa1042710-mRNA-1:exon:22061;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80852251 | 80852336 | 80852251 | ID=Msa1042710-mRNA-1:exon:22060;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80852545 | 80852611 | 80852545 | ID=Msa1042710-mRNA-1:exon:22059;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80853757 | 80853834 | 80853757 | ID=Msa1042710-mRNA-1:exon:22058;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80854172 | 80854237 | 80854172 | ID=Msa1042710-mRNA-1:exon:22057;Parent=Msa1042710-mRNA-1 |
| chr7_1 | exon | 80855181 | 80855392 | 80855181 | ID=Msa1042710-mRNA-1:exon:22056;Parent=Msa1042710-mRNA-1 |
| chr7_1 | five_prime_UTR | 80855295 | 80855392 | 80855295 | ID=Msa1042710-mRNA-1:five_prime_utr;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80855181 | 80855294 | 80855181 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80854172 | 80854237 | 80854172 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80853757 | 80853834 | 80853757 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80852545 | 80852611 | 80852545 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80852251 | 80852336 | 80852251 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80851942 | 80851974 | 80851942 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80851794 | 80851826 | 80851794 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | CDS | 80851717 | 80851722 | 80851717 | ID=Msa1042710-mRNA-1:cds;Parent=Msa1042710-mRNA-1 |
| chr7_1 | three_prime_UTR | 80851616 | 80851716 | 80851616 | ID=Msa1042710-mRNA-1:three_prime_utr;Parent=Msa1042710-mRNA-1 |
| chr7_1 | three_prime_UTR | 80851111 | 80851539 | 80851111 | ID=Msa1042710-mRNA-1:three_prime_utr;Parent=Msa1042710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
