Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523120 | XP_003603764.2 | 91.667 | 264 | 21 | 1 | 1 | 264 | 1 | 263 | 3.45e-92 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523120 | B7FL43 | 91.667 | 264 | 21 | 1 | 1 | 264 | 1 | 263 | 1.65e-92 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003780 | Msa0523120 | 0.843760 | 1.149446e-58 | -8.615850e-47 |
| Msa0016670 | Msa0523120 | 0.801971 | 6.998158e-49 | -8.615850e-47 |
| Msa0027230 | Msa0523120 | 0.801013 | 1.099807e-48 | -8.615850e-47 |
| Msa0027260 | Msa0523120 | 0.819898 | 9.117024e-53 | -8.615850e-47 |
| Msa0029270 | Msa0523120 | 0.829095 | 6.235700e-55 | -8.615850e-47 |
| Msa0032090 | Msa0523120 | 0.868691 | 5.411105e-66 | -8.615850e-47 |
| Msa0032430 | Msa0523120 | 0.861761 | 8.175569e-64 | -8.615850e-47 |
| Msa0032920 | Msa0523120 | -0.801716 | 7.894763e-49 | -8.615850e-47 |
| Msa0040690 | Msa0523120 | 0.842927 | 1.917157e-58 | -8.615850e-47 |
| Msa0074030 | Msa0523120 | 0.818421 | 1.977590e-52 | -8.615850e-47 |
| Msa0074320 | Msa0523120 | 0.818585 | 1.815003e-52 | -8.615850e-47 |
| Msa0075220 | Msa0523120 | 0.805959 | 1.037529e-49 | -8.615850e-47 |
| Msa0079380 | Msa0523120 | 0.847525 | 1.094140e-59 | -8.615850e-47 |
| Msa0094470 | Msa0523120 | 0.812569 | 3.968445e-51 | -8.615850e-47 |
| Msa0122970 | Msa0523120 | 0.803387 | 3.571306e-49 | -8.615850e-47 |
| Msa0124060 | Msa0523120 | 0.801766 | 7.713615e-49 | -8.615850e-47 |
| Msa0127050 | Msa0523120 | 0.825035 | 5.836462e-54 | -8.615850e-47 |
| Msa0128860 | Msa0523120 | 0.805236 | 1.471869e-49 | -8.615850e-47 |
| Msa0144370 | Msa0523120 | 0.808988 | 2.363113e-50 | -8.615850e-47 |
| Msa0146340 | Msa0523120 | 0.814726 | 1.330562e-51 | -8.615850e-47 |
| Msa0168500 | Msa0523120 | 0.806976 | 6.331686e-50 | -8.615850e-47 |
| Msa0169310 | Msa0523120 | 0.818704 | 1.706175e-52 | -8.615850e-47 |
| Msa0172070 | Msa0523120 | 0.863556 | 2.288635e-64 | -8.615850e-47 |
| Msa0174730 | Msa0523120 | 0.805836 | 1.101275e-49 | -8.615850e-47 |
| Msa0187690 | Msa0523120 | 0.820004 | 8.623899e-53 | -8.615850e-47 |
| Msa0187930 | Msa0523120 | 0.805797 | 1.122058e-49 | -8.615850e-47 |
| Msa0194540 | Msa0523120 | 0.809756 | 1.616366e-50 | -8.615850e-47 |
| Msa0220720 | Msa0523120 | 0.800063 | 1.718059e-48 | -8.615850e-47 |
| Msa0225740 | Msa0523120 | 0.806454 | 8.163900e-50 | -8.615850e-47 |
| Msa0385300 | Msa0523120 | 0.969489 | 3.382711e-130 | -8.615850e-47 |
| Msa0385580 | Msa0523120 | 0.813728 | 2.210422e-51 | -8.615850e-47 |
| Msa0393280 | Msa0523120 | 0.802786 | 4.756539e-49 | -8.615850e-47 |
| Msa0395820 | Msa0523120 | 0.816465 | 5.453998e-52 | -8.615850e-47 |
| Msa0402650 | Msa0523120 | 0.815741 | 7.915151e-52 | -8.615850e-47 |
| Msa0449210 | Msa0523120 | 0.802695 | 4.966028e-49 | -8.615850e-47 |
| Msa0479430 | Msa0523120 | 0.901777 | 1.901494e-78 | -8.615850e-47 |
| Msa0244780 | Msa0523120 | 0.808451 | 3.077034e-50 | -8.615850e-47 |
| Msa0255090 | Msa0523120 | 0.807302 | 5.400604e-50 | -8.615850e-47 |
| Msa0259380 | Msa0523120 | 0.807406 | 5.134322e-50 | -8.615850e-47 |
| Msa0268130 | Msa0523120 | 0.817242 | 3.650104e-52 | -8.615850e-47 |
| Msa0272490 | Msa0523120 | 0.810434 | 1.154844e-50 | -8.615850e-47 |
| Msa0289580 | Msa0523120 | 0.801920 | 7.169635e-49 | -8.615850e-47 |
| Msa0289610 | Msa0523120 | 0.810529 | 1.101681e-50 | -8.615850e-47 |
| Msa0292400 | Msa0523120 | 0.820457 | 6.790424e-53 | -8.615850e-47 |
| Msa0298990 | Msa0523120 | 0.818198 | 2.221699e-52 | -8.615850e-47 |
| Msa0312700 | Msa0523120 | 0.806959 | 6.385387e-50 | -8.615850e-47 |
| Msa0327300 | Msa0523120 | 0.815101 | 1.098489e-51 | -8.615850e-47 |
| Msa0327330 | Msa0523120 | 0.832199 | 1.083435e-55 | -8.615850e-47 |
| Msa0523120 | Msa0526540 | 0.815564 | 8.664450e-52 | -8.615850e-47 |
| Msa0523120 | Msa0532070 | 0.837380 | 5.377693e-57 | -8.615850e-47 |
| Msa0523120 | Msa0554920 | 0.814896 | 1.220024e-51 | -8.615850e-47 |
| Msa0523120 | Msa0569200 | 0.828568 | 8.364705e-55 | -8.615850e-47 |
| Msa0523120 | Msa0576940 | 0.820018 | 8.560181e-53 | -8.615850e-47 |
| Msa0523120 | Msa0608500 | 0.809853 | 1.540737e-50 | -8.615850e-47 |
| Msa0523120 | Msa0615440 | 0.830136 | 3.481144e-55 | -8.615850e-47 |
| Msa0523120 | Msa0643560 | 0.813428 | 2.572917e-51 | -8.615850e-47 |
| Msa0523120 | Msa0649020 | 0.826601 | 2.480984e-54 | -8.615850e-47 |
| Msa0523120 | Msa0649050 | 0.822719 | 2.037704e-53 | -8.615850e-47 |
| Msa0523120 | Msa0650020 | 0.804395 | 2.204787e-49 | -8.615850e-47 |
| Msa0523120 | Msa0677290 | 0.801274 | 9.727325e-49 | -8.615850e-47 |
| Msa0523120 | Msa0691980 | 0.802965 | 4.367691e-49 | -8.615850e-47 |
| Msa0523120 | Msa0698490 | 0.831808 | 1.352907e-55 | -8.615850e-47 |
| Msa0523120 | Msa0698660 | 0.834696 | 2.581074e-56 | -8.615850e-47 |
| Msa0523120 | Msa0763830 | 0.808516 | 2.979964e-50 | -8.615850e-47 |
| Msa0523120 | Msa0808270 | 0.807646 | 4.566685e-50 | -8.615850e-47 |
| Msa0523120 | Msa0876800 | 0.820804 | 5.651549e-53 | -8.615850e-47 |
| Msa0523120 | Msa0892120 | 0.806011 | 1.011860e-49 | -8.615850e-47 |
| Msa0523120 | Msa0902760 | 0.809571 | 1.771637e-50 | -8.615850e-47 |
| Msa0523120 | Msa1006840 | 0.825099 | 5.638200e-54 | -8.615850e-47 |
| Msa0523120 | Msa1013400 | 0.816934 | 4.280366e-52 | -8.615850e-47 |
| Msa0523120 | Msa1019260 | 0.804930 | 1.704875e-49 | -8.615850e-47 |
| Msa0523120 | Msa1043690 | 0.856922 | 2.318745e-62 | -8.615850e-47 |
| Msa0523120 | Msa1081150 | 0.841407 | 4.842580e-58 | -8.615850e-47 |
| Msa0523120 | Msa1081980 | 0.802519 | 5.399800e-49 | -8.615850e-47 |
| Msa0523120 | Msa1093530 | 0.808726 | 2.688131e-50 | -8.615850e-47 |
| Msa0523120 | Msa1104140 | 0.857124 | 2.020489e-62 | -8.615850e-47 |
| Msa0523120 | Msa1104210 | 0.816498 | 5.362260e-52 | -8.615850e-47 |
| Msa0523120 | Msa1106700 | 0.823326 | 1.471522e-53 | -8.615850e-47 |
| Msa0523120 | Msa1126510 | 0.804134 | 2.499372e-49 | -8.615850e-47 |
| Msa0523120 | Msa1135890 | 0.803390 | 3.566596e-49 | -8.615850e-47 |
| Msa0523120 | Msa1143650 | 0.800699 | 1.275309e-48 | -8.615850e-47 |
| Msa0523120 | Msa1166860 | 0.810832 | 9.474488e-51 | -8.615850e-47 |
| Msa0523120 | Msa1170670 | 0.812821 | 3.495032e-51 | -8.615850e-47 |
| Msa0523120 | Msa1201650 | 0.814578 | 1.434724e-51 | -8.615850e-47 |
| Msa0523120 | Msa1209460 | 0.828255 | 9.950127e-55 | -8.615850e-47 |
| Msa0523120 | Msa1220280 | 0.808761 | 2.642727e-50 | -8.615850e-47 |
| Msa0523120 | Msa1225700 | 0.811815 | 5.796988e-51 | -8.615850e-47 |
| Msa0523120 | Msa1254610 | 0.805060 | 1.601408e-49 | -8.615850e-47 |
| Msa0523120 | Msa1265890 | 0.808589 | 2.875261e-50 | -8.615850e-47 |
| Msa0523120 | Msa1330410 | 0.819790 | 9.650588e-53 | -8.615850e-47 |
| Msa0523120 | Msa1358250 | 0.801906 | 7.218906e-49 | -8.615850e-47 |
| Msa0523120 | Msa1363330 | 0.818241 | 2.172317e-52 | -8.615850e-47 |
| Msa0523120 | Msa1374120 | 0.861783 | 8.047154e-64 | -8.615850e-47 |
| Msa0523120 | Msa1379760 | 0.805681 | 1.186958e-49 | -8.615850e-47 |
| Msa0523120 | Msa1382560 | 0.800202 | 1.609774e-48 | -8.615850e-47 |
| Msa0523120 | Msa1382620 | 0.848140 | 7.407824e-60 | -8.615850e-47 |
| Msa0523120 | Msa1386600 | 0.818892 | 1.546140e-52 | -8.615850e-47 |
| Msa0523120 | Msa1394290 | 0.833135 | 6.344596e-56 | -8.615850e-47 |
| Msa0523120 | Msa1405930 | 0.808926 | 2.435619e-50 | -8.615850e-47 |
| Msa0523120 | Msa1418090 | 0.800367 | 1.490189e-48 | -8.615850e-47 |
| Msa0523120 | Msa1432700 | 0.823569 | 1.290767e-53 | -8.615850e-47 |
| Msa0523120 | Msa1448690 | 0.815996 | 6.942588e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523120 | MtrunA17_Chr3g0142711 | 91.667 | 264 | 21 | 1 | 1 | 264 | 1 | 263 | 3.18e-96 | 283 |
| Msa0523120 | MtrunA17_Chr3g0140151 | 51.961 | 102 | 47 | 1 | 117 | 218 | 97 | 196 | 1.62e-27 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523120 | AT1G19990.1 | 43.750 | 272 | 116 | 10 | 2 | 261 | 3 | 249 | 8.22e-37 | 131 |
| Msa0523120 | AT5G11600.2 | 55.814 | 86 | 38 | 0 | 106 | 191 | 108 | 193 | 1.69e-26 | 103 |
| Msa0523120 | AT5G11600.1 | 55.814 | 86 | 38 | 0 | 106 | 191 | 108 | 193 | 1.69e-26 | 103 |
Find 65 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATAATTGACGAATTAA+AGG | 0.232622 | 3_4:+76463102 | None:intergenic |
| ACTTTCTTTGCCACCTCTTT+AGG | 0.245967 | 3_4:+76463564 | None:intergenic |
| CAACGGTAAACCCCTTTCTA+AGG | 0.258341 | 3_4:-76466261 | Msa0523120:CDS |
| TTTCTTAATTGTAACAGATT+TGG | 0.302366 | 3_4:+76463461 | None:intergenic |
| ACAGCAGTTACAGACTTAAC+AGG | 0.336791 | 3_4:+76463495 | None:intergenic |
| TTTGTGAACAATCGATTCTA+AGG | 0.355684 | 3_4:+76466365 | None:intergenic |
| TGCTTTGATGTGGAGTTTGT+TGG | 0.359320 | 3_4:+76463399 | None:intergenic |
| ACGGAAGAATTTGGGGTAGC+TGG | 0.368565 | 3_4:+76463432 | None:intergenic |
| AACTGCAGGTTGATGGAATC+AGG | 0.375812 | 3_4:-76463594 | Msa0523120:intron |
| ATAATAACATAAATTGCATT+TGG | 0.387140 | 3_4:-76463015 | Msa0523120:three_prime_UTR |
| TTGGTGACACAAAACTTGTA+AGG | 0.394895 | 3_4:-76463213 | Msa0523120:three_prime_UTR |
| ATTTGTGCCATTTCGCTAGT+TGG | 0.401961 | 3_4:+76465711 | None:intergenic |
| CTAGCGAAATGGCACAAATC+TGG | 0.411971 | 3_4:-76465707 | Msa0523120:intron |
| GTGGCACGAGGAATGGGTTC+AGG | 0.420548 | 3_4:+76466206 | None:intergenic |
| CTGGGGCAAAAGCATAAATC+TGG | 0.420706 | 3_4:+76462953 | None:intergenic |
| CTTCTCGTTCCAAAGTTAAG+AGG | 0.423874 | 3_4:-76466178 | Msa0523120:CDS |
| TGATTGCAACTGCAGGTTGA+TGG | 0.428702 | 3_4:-76463601 | Msa0523120:intron |
| TCAGATTTGTGCTTCTTGGT+TGG | 0.428762 | 3_4:+76463357 | None:intergenic |
| AAAGAAGAAGGTAAAGAAAG+AGG | 0.432786 | 3_4:-76465954 | Msa0523120:CDS |
| CTTGAGTTCCCTCTTAACTT+TGG | 0.435585 | 3_4:+76466169 | None:intergenic |
| AGCTGAAGTGGCACGAGGAA+TGG | 0.440315 | 3_4:+76466199 | None:intergenic |
| GTCTCGTAGAAAACCCTAGA+AGG | 0.445303 | 3_4:+76465750 | None:intergenic |
| ATAAATTGCATTTGGCAGAA+AGG | 0.449679 | 3_4:-76463007 | Msa0523120:three_prime_UTR |
| GGTGAAGATGAACAAGGTTT+GGG | 0.454900 | 3_4:+76466404 | None:intergenic |
| GAAGGTTAAGAAAGTAAAGA+AGG | 0.462009 | 3_4:-76465909 | Msa0523120:CDS |
| AGGTGAAGATGAACAAGGTT+TGG | 0.463475 | 3_4:+76466403 | None:intergenic |
| GAAGGTAAAGAAAGAGGAAG+AGG | 0.464209 | 3_4:-76465948 | Msa0523120:CDS |
| GCTGAAGTGGCACGAGGAAT+GGG | 0.464474 | 3_4:+76466200 | None:intergenic |
| CGGAAGAATTTGGGGTAGCT+GGG | 0.468663 | 3_4:+76463433 | None:intergenic |
| ACAAATTCCAACTAGCGAAA+TGG | 0.472854 | 3_4:-76465718 | Msa0523120:CDS |
| GACATAAGCGATTCTGAAGA+AGG | 0.482635 | 3_4:-76466439 | Msa0523120:five_prime_UTR |
| TTAGAAAGGGGTTTACCGTT+GGG | 0.482681 | 3_4:+76466263 | None:intergenic |
| GTGTCACCAACAACAAATGC+CGG | 0.491011 | 3_4:+76463226 | None:intergenic |
| TTTGTCATCGTCGTCTTCGT+CGG | 0.494023 | 3_4:+76466130 | None:intergenic |
| CTTAGAAAGGGGTTTACCGT+TGG | 0.503604 | 3_4:+76466262 | None:intergenic |
| GGTGGATCACGTTTCTGTCC+AGG | 0.503762 | 3_4:+76465875 | None:intergenic |
| ATCAGGCTTGCTTCCTAAAG+AGG | 0.510477 | 3_4:-76463577 | Msa0523120:CDS |
| ATTGTTATGCAAACCTCTGC+AGG | 0.514578 | 3_4:+76465854 | None:intergenic |
| TGTCACCAACAACAAATGCC+GGG | 0.520299 | 3_4:+76463227 | None:intergenic |
| TGTGCTGTGTTAGGTTGTGA+AGG | 0.525327 | 3_4:-76465990 | Msa0523120:intron |
| ATTCTAAGGTTCAATGTGGA+TGG | 0.542258 | 3_4:+76466379 | None:intergenic |
| AAGAAGGTTTATGATTTACC+TGG | 0.546770 | 3_4:-76465893 | Msa0523120:CDS |
| AAAGAAAGCTCTGCAGCAGA+AGG | 0.552066 | 3_4:-76463526 | Msa0523120:CDS |
| AACGGTAAACCCCTTTCTAA+GGG | 0.555197 | 3_4:-76466260 | Msa0523120:CDS |
| GGAGTTTGTCTGCTTTGATG+TGG | 0.556824 | 3_4:+76463389 | None:intergenic |
| TGGTGACACAAAACTTGTAA+GGG | 0.558331 | 3_4:-76463212 | Msa0523120:three_prime_UTR |
| CTTCTTGGTTGGCTTCGATG+TGG | 0.562372 | 3_4:+76463368 | None:intergenic |
| ACGAATTAAAGGTCTACAGC+AGG | 0.562539 | 3_4:+76463113 | None:intergenic |
| TTCTCGTTCCAAAGTTAAGA+GGG | 0.573394 | 3_4:-76466177 | Msa0523120:CDS |
| TAAGGTTCAATGTGGATGGA+AGG | 0.579955 | 3_4:+76466383 | None:intergenic |
| ACAGGTTTCGAATCTTCAGA+AGG | 0.581427 | 3_4:+76466338 | None:intergenic |
| CAAAGTTAAGAGGGAACTCA+AGG | 0.601249 | 3_4:-76466168 | Msa0523120:CDS |
| TTTGGAACGAGAAGCTGAAG+TGG | 0.604596 | 3_4:+76466187 | None:intergenic |
| GTCACCAACAACAAATGCCG+GGG | 0.615591 | 3_4:+76463228 | None:intergenic |
| GGTTGTTGTTACAGAAACGA+AGG | 0.621147 | 3_4:-76465927 | Msa0523120:CDS |
| AAACTTGTAAGGGGCACATG+AGG | 0.627146 | 3_4:-76463202 | Msa0523120:three_prime_UTR |
| GAAACGTGATCCACCTGCAG+AGG | 0.633728 | 3_4:-76465867 | Msa0523120:intron |
| CGAGAAGCTGAAGTGGCACG+AGG | 0.634997 | 3_4:+76466194 | None:intergenic |
| ATCTGAAAATTCGAGCTCTG+AGG | 0.636255 | 3_4:-76463340 | Msa0523120:CDS |
| AGGCTTGCTTCCTAAAGAGG+TGG | 0.651439 | 3_4:-76463574 | Msa0523120:CDS |
| GTTATGCAAACCTCTGCAGG+TGG | 0.653027 | 3_4:+76465857 | None:intergenic |
| GGTGACACAAAACTTGTAAG+GGG | 0.653765 | 3_4:-76463211 | Msa0523120:three_prime_UTR |
| ATCGATTCTAAGGTTCAATG+TGG | 0.658585 | 3_4:+76466375 | None:intergenic |
| ATGGAAGGTGAAGATGAACA+AGG | 0.690504 | 3_4:+76466398 | None:intergenic |
| TCACCAACAACAAATGCCGG+GGG | 0.698115 | 3_4:+76463229 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATTATATACAGTTTA+AGG | - | chr3_4:76464659-76464678 | Msa0523120:intron | 10.0% |
| !!! | TTTTTTTTTACTTTTCTTTT+GGG | - | chr3_4:76464847-76464866 | Msa0523120:intron | 10.0% |
| !!! | CTTTTTTTTTACTTTTCTTT+TGG | - | chr3_4:76464846-76464865 | Msa0523120:intron | 15.0% |
| !!! | TTTTTTTTACTTTTCTTTTG+GGG | - | chr3_4:76464848-76464867 | Msa0523120:intron | 15.0% |
| !!! | ATTACATTCTTTTAGATATT+TGG | + | chr3_4:76465697-76465716 | None:intergenic | 15.0% |
| !! | ATCCTAATATTTAAAAATGT+TGG | - | chr3_4:76466375-76466394 | Msa0523120:five_prime_UTR | 15.0% |
| !!! | TACCAACATTTTTAAATATT+AGG | + | chr3_4:76466380-76466399 | None:intergenic | 15.0% |
| !! | ATAATAACATAAATTGCATT+TGG | - | chr3_4:76466410-76466429 | Msa0523120:five_prime_UTR | 15.0% |
| !!! | TTTTTTTTCTCTCTTGTTTT+CGG | + | chr3_4:76462966-76462985 | None:intergenic | 20.0% |
| !!! | CTATTTTAGAAATGTATGTT+CGG | - | chr3_4:76463397-76463416 | Msa0523120:CDS | 20.0% |
| !! | AATTGCAATTCATCATATTT+AGG | - | chr3_4:76463789-76463808 | Msa0523120:intron | 20.0% |
| !! | ATTGCAATTCATCATATTTA+GGG | - | chr3_4:76463790-76463809 | Msa0523120:intron | 20.0% |
| !! | ATTAAGATGTTTATCCAAAT+AGG | - | chr3_4:76464034-76464053 | Msa0523120:intron | 20.0% |
| !! | AAAATTGTTAAAGTCCTATT+TGG | + | chr3_4:76464051-76464070 | None:intergenic | 20.0% |
| !!! | AATAGGACTTTAACAATTTT+AGG | - | chr3_4:76464051-76464070 | Msa0523120:intron | 20.0% |
| !!! | ACCAATTTAAAATGATATGA+GGG | + | chr3_4:76465476-76465495 | None:intergenic | 20.0% |
| !!! | AACCAATTTAAAATGATATG+AGG | + | chr3_4:76465477-76465496 | None:intergenic | 20.0% |
| !! | TTTCTTAATTGTAACAGATT+TGG | + | chr3_4:76465967-76465986 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTCTCTTGTTTTC+GGG | + | chr3_4:76462965-76462984 | None:intergenic | 25.0% |
| ! | AACATAAAAACGAACTGAAA+AGG | + | chr3_4:76463620-76463639 | None:intergenic | 25.0% |
| ! | AGCTACATTCATAAATTACA+TGG | + | chr3_4:76463905-76463924 | None:intergenic | 25.0% |
| ! | AATGTAGCTTATAGCTTATA+CGG | - | chr3_4:76463916-76463935 | Msa0523120:intron | 25.0% |
| !!! | ACTTTAACAATTTTAGGAGT+TGG | - | chr3_4:76464057-76464076 | Msa0523120:intron | 25.0% |
| ! | TAAGTTTAATTGCTAGACTT+TGG | - | chr3_4:76464082-76464101 | Msa0523120:intron | 25.0% |
| ! | GCAATTTAATATATTTCCAG+GGG | + | chr3_4:76464592-76464611 | None:intergenic | 25.0% |
| ! | CGCAATTTAATATATTTCCA+GGG | + | chr3_4:76464593-76464612 | None:intergenic | 25.0% |
| ! | ATATAATATATAACCCTGTG+AGG | + | chr3_4:76464651-76464670 | None:intergenic | 25.0% |
| !! | ATGTGTAATGACTTGTATTT+AGG | - | chr3_4:76464685-76464704 | Msa0523120:intron | 25.0% |
| ! | CAAATCAAATATAGACAGTA+AGG | + | chr3_4:76464988-76465007 | None:intergenic | 25.0% |
| !! | GTTAAGTTGTTTATATCCTT+TGG | - | chr3_4:76465063-76465082 | Msa0523120:intron | 25.0% |
| ! | GTTTATATCCTTTGGATTAA+CGG | - | chr3_4:76465071-76465090 | Msa0523120:intron | 25.0% |
| !!! | TTTTGTTGTTTTCTTGTCTT+AGG | - | chr3_4:76465097-76465116 | Msa0523120:intron | 25.0% |
| !!! | GTTTGATTTGTTAACTATGA+AGG | - | chr3_4:76465210-76465229 | Msa0523120:intron | 25.0% |
| ! | TTGAAACATAAGACAAGTAT+AGG | - | chr3_4:76465280-76465299 | Msa0523120:intron | 25.0% |
| !!! | TGAGCTTTGTTATTTGATTT+TGG | - | chr3_4:76465313-76465332 | Msa0523120:intron | 25.0% |
| !!! | GAGCTTTGTTATTTGATTTT+GGG | - | chr3_4:76465314-76465333 | Msa0523120:intron | 25.0% |
| !!! | AGCTTTGTTATTTGATTTTG+GGG | - | chr3_4:76465315-76465334 | Msa0523120:intron | 25.0% |
| !! | CCAATTTAAAATGATATGAG+GGG | + | chr3_4:76465475-76465494 | None:intergenic | 25.0% |
| !!! | AGGTTGTCTTGTTTAAATAA+GGG | + | chr3_4:76465605-76465624 | None:intergenic | 25.0% |
| !! | TCTTTTTAACGGAAGAATTT+GGG | + | chr3_4:76466004-76466023 | None:intergenic | 25.0% |
| !! | TTCTTTTTAACGGAAGAATT+TGG | + | chr3_4:76466005-76466024 | None:intergenic | 25.0% |
| ! | AACAAAAAAGAAGAGAAAAG+TGG | - | chr3_4:76466139-76466158 | Msa0523120:CDS | 25.0% |
| ! | TTGCATAATTGACGAATTAA+AGG | + | chr3_4:76466326-76466345 | None:intergenic | 25.0% |
| ! | ATTCCTCTCCAAAAAAATTA+GGG | + | chr3_4:76466357-76466376 | None:intergenic | 25.0% |
| ! | TTTGTGAACAATCGATTCTA+AGG | + | chr3_4:76463063-76463082 | None:intergenic | 30.0% |
| !! | TTGGATATCTTTTTGGAGAT+AGG | + | chr3_4:76463321-76463340 | None:intergenic | 30.0% |
| !!! | CTTGGTTTTGGATATCTTTT+TGG | + | chr3_4:76463328-76463347 | None:intergenic | 30.0% |
| CAAAAAGATATCCAAAACCA+AGG | - | chr3_4:76463326-76463345 | Msa0523120:CDS | 30.0% | |
| ! | AGAATTTCGATTTTGTACCT+TGG | + | chr3_4:76463346-76463365 | None:intergenic | 30.0% |
| AGAAGTGAAGAAAAAGAAGA+AGG | - | chr3_4:76463459-76463478 | Msa0523120:CDS | 30.0% | |
| AAAGAAGAAGGTAAAGAAAG+AGG | - | chr3_4:76463471-76463490 | Msa0523120:CDS | 30.0% | |
| GAAGGTTAAGAAAGTAAAGA+AGG | - | chr3_4:76463516-76463535 | Msa0523120:CDS | 30.0% | |
| AAGAAGGTTTATGATTTACC+TGG | - | chr3_4:76463532-76463551 | Msa0523120:CDS | 30.0% | |
| !!! | TTTTTTAGAGAGATCCTTCT+AGG | - | chr3_4:76463661-76463680 | Msa0523120:intron | 30.0% |
| !! | TTTTTAGAGAGATCCTTCTA+GGG | - | chr3_4:76463662-76463681 | Msa0523120:intron | 30.0% |
| AACAGAAACATAAGCAGAAT+AGG | + | chr3_4:76463758-76463777 | None:intergenic | 30.0% | |
| ! | CAATTCATCATATTTAGGGT+CGG | - | chr3_4:76463794-76463813 | Msa0523120:intron | 30.0% |
| TAAATTACATGGAGAGCTTA+TGG | + | chr3_4:76463894-76463913 | None:intergenic | 30.0% | |
| CACTTCATAATTCACATTCA+TGG | + | chr3_4:76464130-76464149 | None:intergenic | 30.0% | |
| TACTTGTGAATTCGATTAAG+AGG | - | chr3_4:76464206-76464225 | Msa0523120:intron | 30.0% | |
| AAAGTGCATTTGAATGGAAA+GGG | + | chr3_4:76464438-76464457 | None:intergenic | 30.0% | |
| TTGTACAAAGTGCATTTGAA+TGG | + | chr3_4:76464444-76464463 | None:intergenic | 30.0% | |
| !! | AAAAGTACTCTTTGAGTCTA+AGG | + | chr3_4:76464542-76464561 | None:intergenic | 30.0% |
| GCGCAATTTAATATATTTCC+AGG | + | chr3_4:76464594-76464613 | None:intergenic | 30.0% | |
| ! | ATGCTATTATTTTCCTCACA+GGG | - | chr3_4:76464635-76464654 | Msa0523120:intron | 30.0% |
| TAAAACCAGAAGCCAATTTA+AGG | - | chr3_4:76464708-76464727 | Msa0523120:intron | 30.0% | |
| AATCACTTCTGTCCTTAAAT+TGG | + | chr3_4:76464723-76464742 | None:intergenic | 30.0% | |
| AGAATTTACACAAACACAAG+GGG | + | chr3_4:76464750-76464769 | None:intergenic | 30.0% | |
| GAGAATTTACACAAACACAA+GGG | + | chr3_4:76464751-76464770 | None:intergenic | 30.0% | |
| AGAGAATTTACACAAACACA+AGG | + | chr3_4:76464752-76464771 | None:intergenic | 30.0% | |
| GTGTAAATTCTCTCAAATGA+TGG | - | chr3_4:76464759-76464778 | Msa0523120:intron | 30.0% | |
| CAAAATAACCGTTAATCCAA+AGG | + | chr3_4:76465082-76465101 | None:intergenic | 30.0% | |
| !! | TCTTAGGTCAGAGTTATTTT+AGG | - | chr3_4:76465113-76465132 | Msa0523120:intron | 30.0% |
| TAACAAATCAAACACCTGTT+AGG | + | chr3_4:76465203-76465222 | None:intergenic | 30.0% | |
| ! | AGGTGGAGATTTTTATGTTT+TGG | + | chr3_4:76465380-76465399 | None:intergenic | 30.0% |
| ! | TTTAAAATGATATGAGGGGA+TGG | + | chr3_4:76465471-76465490 | None:intergenic | 30.0% |
| ! | CCCCTCATATCATTTTAAAT+TGG | - | chr3_4:76465472-76465491 | Msa0523120:intron | 30.0% |
| ATGCTCGTATTATAGTCTAA+TGG | - | chr3_4:76465573-76465592 | Msa0523120:intron | 30.0% | |
| !! | CAGGTTGTCTTGTTTAAATA+AGG | + | chr3_4:76465606-76465625 | None:intergenic | 30.0% |
| GAAATGTGTATCATCAAAAC+TGG | - | chr3_4:76465717-76465736 | Msa0523120:CDS | 30.0% | |
| !!! | ATAGAGCGTAGAAGATTTTT+TGG | - | chr3_4:76465792-76465811 | Msa0523120:intron | 30.0% |
| ! | CTTTTTAACGGAAGAATTTG+GGG | + | chr3_4:76466003-76466022 | None:intergenic | 30.0% |
| !!! | GTTTGTTGGCTTCTTTTTAA+CGG | + | chr3_4:76466015-76466034 | None:intergenic | 30.0% |
| ! | ATTTTCAGATTTGTGCTTCT+TGG | + | chr3_4:76466075-76466094 | None:intergenic | 30.0% |
| !! | GATGATTCTGATTTTGACAT+TGG | - | chr3_4:76466110-76466129 | Msa0523120:CDS | 30.0% |
| !!! | ACAATCCACCCTAATTTTTT+TGG | - | chr3_4:76466346-76466365 | Msa0523120:exon | 30.0% |
| GATTCCTCTCCAAAAAAATT+AGG | + | chr3_4:76466358-76466377 | None:intergenic | 30.0% | |
| ATAAATTGCATTTGGCAGAA+AGG | - | chr3_4:76466418-76466437 | Msa0523120:five_prime_UTR | 30.0% | |
| !! | ATTCTAAGGTTCAATGTGGA+TGG | + | chr3_4:76463049-76463068 | None:intergenic | 35.0% |
| !! | ATCGATTCTAAGGTTCAATG+TGG | + | chr3_4:76463053-76463072 | None:intergenic | 35.0% |
| !!! | TTGTCGTCTTGTTTTTTCAC+AGG | + | chr3_4:76463108-76463127 | None:intergenic | 35.0% |
| !!! | AGTTTTGAACCCTTAGAAAG+GGG | + | chr3_4:76463177-76463196 | None:intergenic | 35.0% |
| !!! | GAGTTTTGAACCCTTAGAAA+GGG | + | chr3_4:76463178-76463197 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGAACCCTTAGAA+AGG | + | chr3_4:76463179-76463198 | None:intergenic | 35.0% |
| TTCTCGTTCCAAAGTTAAGA+GGG | - | chr3_4:76463248-76463267 | Msa0523120:three_prime_UTR | 35.0% | |
| ! | TCGATTTTGTACCTTGGTTT+TGG | + | chr3_4:76463340-76463359 | None:intergenic | 35.0% |
| !! | TTAGAGTATTGTGCTGTGTT+AGG | - | chr3_4:76463426-76463445 | Msa0523120:CDS | 35.0% |
| ACAAATTCCAACTAGCGAAA+TGG | - | chr3_4:76463707-76463726 | Msa0523120:intron | 35.0% | |
| !!! | TTGTGACTTTTGAGACTGTT+TGG | - | chr3_4:76463848-76463867 | Msa0523120:intron | 35.0% |
| AATTGTCTTCCATTCACAGT+TGG | + | chr3_4:76464255-76464274 | None:intergenic | 35.0% | |
| ACTGATAAAATGAGACCCTA+AGG | + | chr3_4:76464351-76464370 | None:intergenic | 35.0% | |
| CAAAGTGCATTTGAATGGAA+AGG | + | chr3_4:76464439-76464458 | None:intergenic | 35.0% | |
| GGCTCACATTCAAACATAAA+GGG | + | chr3_4:76464521-76464540 | None:intergenic | 35.0% | |
| AGGCTCACATTCAAACATAA+AGG | + | chr3_4:76464522-76464541 | None:intergenic | 35.0% | |
| ! | CATGCTATTATTTTCCTCAC+AGG | - | chr3_4:76464634-76464653 | Msa0523120:intron | 35.0% |
| GAGGTTTAATCATGCTGTTA+CGG | - | chr3_4:76464811-76464830 | Msa0523120:intron | 35.0% | |
| GTGTATGATTATCTACGAGT+TGG | + | chr3_4:76464893-76464912 | None:intergenic | 35.0% | |
| ACTCGTAGATAATCATACAC+CGG | - | chr3_4:76464893-76464912 | Msa0523120:intron | 35.0% | |
| AACAAGCGAACAAATGCATA+AGG | + | chr3_4:76464965-76464984 | None:intergenic | 35.0% | |
| AAAGAGTGATGTCAGATCTA+GGG | + | chr3_4:76465029-76465048 | None:intergenic | 35.0% | |
| CATGGAGAATACACAGAAAA+AGG | + | chr3_4:76465400-76465419 | None:intergenic | 35.0% | |
| TAAATTGGTTGTGCTGTACA+TGG | - | chr3_4:76465487-76465506 | Msa0523120:intron | 35.0% | |
| ACAATACAATGCCAGTAACT+GGG | + | chr3_4:76465550-76465569 | None:intergenic | 35.0% | |
| AACAATACAATGCCAGTAAC+TGG | + | chr3_4:76465551-76465570 | None:intergenic | 35.0% | |
| CTACCAGACAAGATAAGAAA+AGG | + | chr3_4:76465654-76465673 | None:intergenic | 35.0% | |
| TTCTTATCTTGTCTGGTAGA+AGG | - | chr3_4:76465655-76465674 | Msa0523120:intron | 35.0% | |
| GTAGAAGGAGTAAAAGCTAT+CGG | - | chr3_4:76465670-76465689 | Msa0523120:intron | 35.0% | |
| !!! | TTTTGCAATGTTTTTTCCCC+CGG | - | chr3_4:76466180-76466199 | Msa0523120:CDS | 35.0% |
| ! | TTGGTGACACAAAACTTGTA+AGG | - | chr3_4:76466212-76466231 | Msa0523120:CDS | 35.0% |
| TGGTGACACAAAACTTGTAA+GGG | - | chr3_4:76466213-76466232 | Msa0523120:CDS | 35.0% | |
| ! | GACATAAGCGATTCTGAAGA+AGG | - | chr3_4:76462986-76463005 | Msa0523120:three_prime_UTR | 40.0% |
| GGTGAAGATGAACAAGGTTT+GGG | + | chr3_4:76463024-76463043 | None:intergenic | 40.0% | |
| AGGTGAAGATGAACAAGGTT+TGG | + | chr3_4:76463025-76463044 | None:intergenic | 40.0% | |
| ATGGAAGGTGAAGATGAACA+AGG | + | chr3_4:76463030-76463049 | None:intergenic | 40.0% | |
| TAAGGTTCAATGTGGATGGA+AGG | + | chr3_4:76463045-76463064 | None:intergenic | 40.0% | |
| ACAGGTTTCGAATCTTCAGA+AGG | + | chr3_4:76463090-76463109 | None:intergenic | 40.0% | |
| AAAAAAGCCGCAAAACCCAA+CGG | - | chr3_4:76463147-76463166 | Msa0523120:three_prime_UTR | 40.0% | |
| TTAGAAAGGGGTTTACCGTT+GGG | + | chr3_4:76463165-76463184 | None:intergenic | 40.0% | |
| AACGGTAAACCCCTTTCTAA+GGG | - | chr3_4:76463165-76463184 | Msa0523120:three_prime_UTR | 40.0% | |
| CTTCTCGTTCCAAAGTTAAG+AGG | - | chr3_4:76463247-76463266 | Msa0523120:three_prime_UTR | 40.0% | |
| CTTGAGTTCCCTCTTAACTT+TGG | + | chr3_4:76463259-76463278 | None:intergenic | 40.0% | |
| CAAAGTTAAGAGGGAACTCA+AGG | - | chr3_4:76463257-76463276 | Msa0523120:three_prime_UTR | 40.0% | |
| GAAGGTAAAGAAAGAGGAAG+AGG | - | chr3_4:76463477-76463496 | Msa0523120:CDS | 40.0% | |
| ! | GGTTGTTGTTACAGAAACGA+AGG | - | chr3_4:76463498-76463517 | Msa0523120:CDS | 40.0% |
| ATTGTTATGCAAACCTCTGC+AGG | + | chr3_4:76463574-76463593 | None:intergenic | 40.0% | |
| !! | ATTTGTGCCATTTCGCTAGT+TGG | + | chr3_4:76463717-76463736 | None:intergenic | 40.0% |
| CAAATCTGGTGAGTTCTCAA+CGG | - | chr3_4:76463732-76463751 | Msa0523120:intron | 40.0% | |
| ! | TGGTGATAGTGTTCTTGCAA+GGG | + | chr3_4:76464110-76464129 | None:intergenic | 40.0% |
| ! | ATGGTGATAGTGTTCTTGCA+AGG | + | chr3_4:76464111-76464130 | None:intergenic | 40.0% |
| AATGACATGCCAACTGTGAA+TGG | - | chr3_4:76464243-76464262 | Msa0523120:intron | 40.0% | |
| TTTGTTCCACGACACTTGTT+TGG | - | chr3_4:76464296-76464315 | Msa0523120:intron | 40.0% | |
| TTCAAACCTCCAAATGCCTT+AGG | - | chr3_4:76464332-76464351 | Msa0523120:intron | 40.0% | |
| TCAAACCTCCAAATGCCTTA+GGG | - | chr3_4:76464333-76464352 | Msa0523120:intron | 40.0% | |
| ! | AAATGAGACCCTAAGGCATT+TGG | + | chr3_4:76464344-76464363 | None:intergenic | 40.0% |
| AGTGAGCTTAATTCCCTGTA+CGG | - | chr3_4:76464368-76464387 | Msa0523120:intron | 40.0% | |
| AACCAATTCTACACCGTACA+GGG | + | chr3_4:76464384-76464403 | None:intergenic | 40.0% | |
| AAACCAATTCTACACCGTAC+AGG | + | chr3_4:76464385-76464404 | None:intergenic | 40.0% | |
| ! | GGTTTTGCTGATGTGTACAA+AGG | - | chr3_4:76464400-76464419 | Msa0523120:intron | 40.0% |
| TAATATATTTCCAGGGGCCT+GGG | + | chr3_4:76464586-76464605 | None:intergenic | 40.0% | |
| TTAATATATTTCCAGGGGCC+TGG | + | chr3_4:76464587-76464606 | None:intergenic | 40.0% | |
| ! | TCTGTCCTTAAATTGGCTTC+TGG | + | chr3_4:76464716-76464735 | None:intergenic | 40.0% |
| CTCTCAAATGATGGTTGTGA+TGG | - | chr3_4:76464768-76464787 | Msa0523120:intron | 40.0% | |
| !!! | CCTCGCATAGTTTTGTTTTC+AGG | + | chr3_4:76464795-76464814 | None:intergenic | 40.0% |
| CCTGAAAACAAAACTATGCG+AGG | - | chr3_4:76464792-76464811 | Msa0523120:intron | 40.0% | |
| ! | TTATCTACGAGTTGGAATGC+TGG | + | chr3_4:76464885-76464904 | None:intergenic | 40.0% |
| AAATGCATAAGGCCTGATAG+TGG | + | chr3_4:76464954-76464973 | None:intergenic | 40.0% | |
| CAAAGAGTGATGTCAGATCT+AGG | + | chr3_4:76465030-76465049 | None:intergenic | 40.0% | |
| GTTAGGTAATTGCAACTGCA+AGG | + | chr3_4:76465186-76465205 | None:intergenic | 40.0% | |
| TGCAGTTGCAATTACCTAAC+AGG | - | chr3_4:76465186-76465205 | Msa0523120:intron | 40.0% | |
| GGAGAATACACAGAAAAAGG+TGG | + | chr3_4:76465397-76465416 | None:intergenic | 40.0% | |
| TATGAGGGGATGGAATAACA+GGG | + | chr3_4:76465461-76465480 | None:intergenic | 40.0% | |
| ATATGAGGGGATGGAATAAC+AGG | + | chr3_4:76465462-76465481 | None:intergenic | 40.0% | |
| AGGAAAATTCAATCTGCAGC+AGG | + | chr3_4:76465625-76465644 | None:intergenic | 40.0% | |
| AAGATAAGAAAAGGCGGGAA+AGG | + | chr3_4:76465645-76465664 | None:intergenic | 40.0% | |
| CAGACAAGATAAGAAAAGGC+GGG | + | chr3_4:76465650-76465669 | None:intergenic | 40.0% | |
| CCAGACAAGATAAGAAAAGG+CGG | + | chr3_4:76465651-76465670 | None:intergenic | 40.0% | |
| ACTTTCTTTGCCACCTCTTT+AGG | + | chr3_4:76465864-76465883 | None:intergenic | 40.0% | |
| ACAGCAGTTACAGACTTAAC+AGG | + | chr3_4:76465933-76465952 | None:intergenic | 40.0% | |
| TGCTTTGATGTGGAGTTTGT+TGG | + | chr3_4:76466029-76466048 | None:intergenic | 40.0% | |
| TCAGATTTGTGCTTCTTGGT+TGG | + | chr3_4:76466071-76466090 | None:intergenic | 40.0% | |
| ATCTGAAAATTCGAGCTCTG+AGG | - | chr3_4:76466085-76466104 | Msa0523120:intron | 40.0% | |
| GGTGACACAAAACTTGTAAG+GGG | - | chr3_4:76466214-76466233 | Msa0523120:CDS | 40.0% | |
| ACGAATTAAAGGTCTACAGC+AGG | + | chr3_4:76466315-76466334 | None:intergenic | 40.0% | |
| CCTCTCCAAAAAAATTAGGG+TGG | + | chr3_4:76466354-76466373 | None:intergenic | 40.0% | |
| !!! | CCACCCTAATTTTTTTGGAG+AGG | - | chr3_4:76466351-76466370 | Msa0523120:exon | 40.0% |
| CTTAGAAAGGGGTTTACCGT+TGG | + | chr3_4:76463166-76463185 | None:intergenic | 45.0% | |
| CAACGGTAAACCCCTTTCTA+AGG | - | chr3_4:76463164-76463183 | Msa0523120:three_prime_UTR | 45.0% | |
| ! | TTTGGAACGAGAAGCTGAAG+TGG | + | chr3_4:76463241-76463260 | None:intergenic | 45.0% |
| TTTGTCATCGTCGTCTTCGT+CGG | + | chr3_4:76463298-76463317 | None:intergenic | 45.0% | |
| ! | TGTGCTGTGTTAGGTTGTGA+AGG | - | chr3_4:76463435-76463454 | Msa0523120:CDS | 45.0% |
| GTCTCGTAGAAAACCCTAGA+AGG | + | chr3_4:76463678-76463697 | None:intergenic | 45.0% | |
| CTAGCGAAATGGCACAAATC+TGG | - | chr3_4:76463718-76463737 | Msa0523120:intron | 45.0% | |
| GTTTCTCAGTCTCTTCTGAG+TGG | + | chr3_4:76464173-76464192 | None:intergenic | 45.0% | |
| ! | TACAGTCCAAACAAGTGTCG+TGG | + | chr3_4:76464305-76464324 | None:intergenic | 45.0% |
| TTCCCTGTACGGTGTAGAAT+TGG | - | chr3_4:76464379-76464398 | Msa0523120:intron | 45.0% | |
| TAGAACCGCTAGGAACTACA+GGG | + | chr3_4:76464919-76464938 | None:intergenic | 45.0% | |
| TTAGAACCGCTAGGAACTAC+AGG | + | chr3_4:76464920-76464939 | None:intergenic | 45.0% | |
| ! | GCATGCAATTTAGAACCGCT+AGG | + | chr3_4:76464929-76464948 | None:intergenic | 45.0% |
| AATTGCATGCCACCACTATC+AGG | - | chr3_4:76464939-76464958 | Msa0523120:intron | 45.0% | |
| GGGAAGAGAGACAAGAAAAG+AGG | + | chr3_4:76465440-76465459 | None:intergenic | 45.0% | |
| ATGAGGGGATGGAATAACAG+GGG | + | chr3_4:76465460-76465479 | None:intergenic | 45.0% | |
| AGTTGTCGTAACCCAGTTAC+TGG | - | chr3_4:76465536-76465555 | Msa0523120:intron | 45.0% | |
| ! | CCGCCTTTTCTTATCTTGTC+TGG | - | chr3_4:76465648-76465667 | Msa0523120:intron | 45.0% |
| ! | TGATTGCAACTGCAGGTTGA+TGG | - | chr3_4:76465824-76465843 | Msa0523120:intron | 45.0% |
| !! | AACTGCAGGTTGATGGAATC+AGG | - | chr3_4:76465831-76465850 | Msa0523120:intron | 45.0% |
| ! | ATCAGGCTTGCTTCCTAAAG+AGG | - | chr3_4:76465848-76465867 | Msa0523120:intron | 45.0% |
| AAAGAAAGCTCTGCAGCAGA+AGG | - | chr3_4:76465899-76465918 | Msa0523120:CDS | 45.0% | |
| GGAGTTTGTCTGCTTTGATG+TGG | + | chr3_4:76466039-76466058 | None:intergenic | 45.0% | |
| TGTCACCAACAACAAATGCC+GGG | + | chr3_4:76466201-76466220 | None:intergenic | 45.0% | |
| GTGTCACCAACAACAAATGC+CGG | + | chr3_4:76466202-76466221 | None:intergenic | 45.0% | |
| ! | AAACTTGTAAGGGGCACATG+AGG | - | chr3_4:76466223-76466242 | Msa0523120:CDS | 45.0% |
| !! | ATAAAAAAAAAAAAAAAACT+AGG | + | chr3_4:76463373-76463392 | None:intergenic | 5.0% |
| !!! | CTCTCTTGTTTTCGGGACTC+CGG | + | chr3_4:76462958-76462977 | None:intergenic | 50.0% |
| ! | GGGTTTACCGTTGGGTTTTG+CGG | + | chr3_4:76463157-76463176 | None:intergenic | 50.0% |
| GTTATGCAAACCTCTGCAGG+TGG | + | chr3_4:76463571-76463590 | None:intergenic | 50.0% | |
| ! | TGAGACCCTAAGGCATTTGG+AGG | + | chr3_4:76464341-76464360 | None:intergenic | 50.0% |
| TATAACACCAAGCCTAGCCC+AGG | - | chr3_4:76464566-76464585 | Msa0523120:intron | 50.0% | |
| !! | TGCATAAGGCCTGATAGTGG+TGG | + | chr3_4:76464951-76464970 | None:intergenic | 50.0% |
| TCTCCATGACCTTTACCCCA+AGG | - | chr3_4:76465412-76465431 | Msa0523120:intron | 50.0% | |
| !! | ACAAGAAAAGAGGCGCCTTG+GGG | + | chr3_4:76465430-76465449 | None:intergenic | 50.0% |
| !! | GACAAGAAAAGAGGCGCCTT+GGG | + | chr3_4:76465431-76465450 | None:intergenic | 50.0% |
| !! | AGACAAGAAAAGAGGCGCCT+TGG | + | chr3_4:76465432-76465451 | None:intergenic | 50.0% |
| ! | GCGTTACTGATTGCAACTGC+AGG | - | chr3_4:76465817-76465836 | Msa0523120:intron | 50.0% |
| ! | AGGCTTGCTTCCTAAAGAGG+TGG | - | chr3_4:76465851-76465870 | Msa0523120:intron | 50.0% |
| ! | CGGAAGAATTTGGGGTAGCT+GGG | + | chr3_4:76465995-76466014 | None:intergenic | 50.0% |
| ! | ACGGAAGAATTTGGGGTAGC+TGG | + | chr3_4:76465996-76466015 | None:intergenic | 50.0% |
| !! | CTTCTTGGTTGGCTTCGATG+TGG | + | chr3_4:76466060-76466079 | None:intergenic | 50.0% |
| !! | TTTCCCCCGGCATTTGTTGT+TGG | - | chr3_4:76466193-76466212 | Msa0523120:CDS | 50.0% |
| TCACCAACAACAAATGCCGG+GGG | + | chr3_4:76466199-76466218 | None:intergenic | 50.0% | |
| GTCACCAACAACAAATGCCG+GGG | + | chr3_4:76466200-76466219 | None:intergenic | 50.0% | |
| GCTGAAGTGGCACGAGGAAT+GGG | + | chr3_4:76463228-76463247 | None:intergenic | 55.0% | |
| AGCTGAAGTGGCACGAGGAA+TGG | + | chr3_4:76463229-76463248 | None:intergenic | 55.0% | |
| GGTGGATCACGTTTCTGTCC+AGG | + | chr3_4:76463553-76463572 | None:intergenic | 55.0% | |
| GAAACGTGATCCACCTGCAG+AGG | - | chr3_4:76463558-76463577 | Msa0523120:CDS | 55.0% | |
| !! | AAAGAGGCGCCTTGGGGTAA+AGG | + | chr3_4:76465424-76465443 | None:intergenic | 55.0% |
| ! | GTGGCACGAGGAATGGGTTC+AGG | + | chr3_4:76463222-76463241 | None:intergenic | 60.0% |
| CGAGAAGCTGAAGTGGCACG+AGG | + | chr3_4:76463234-76463253 | None:intergenic | 60.0% | |
| TATTTCCAGGGGCCTGGGCT+AGG | + | chr3_4:76464581-76464600 | None:intergenic | 60.0% | |
| ACCGGCCCTGTAGTTCCTAG+CGG | - | chr3_4:76464911-76464930 | Msa0523120:intron | 60.0% | |
| ACCGCTAGGAACTACAGGGC+CGG | + | chr3_4:76464915-76464934 | None:intergenic | 60.0% | |
| GCGCCTTGGGGTAAAGGTCA+TGG | + | chr3_4:76465418-76465437 | None:intergenic | 60.0% | |
| ! | CCAGGGGCCTGGGCTAGGCT+TGG | + | chr3_4:76464576-76464595 | None:intergenic | 75.0% |
| CCAAGCCTAGCCCAGGCCCC+TGG | - | chr3_4:76464573-76464592 | Msa0523120:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 76462955 | 76466492 | 76462955 | ID=Msa0523120;Name=Msa0523120 |
| chr3_4 | mRNA | 76462955 | 76466492 | 76462955 | ID=Msa0523120-mRNA-1;Parent=Msa0523120;Name=Msa0523120-mRNA-1;_AED=0.05;_eAED=0.05;_QI=129|1|1|1|1|1|4|326|264 |
| chr3_4 | exon | 76462955 | 76463608 | 76462955 | ID=Msa0523120-mRNA-1:exon:22165;Parent=Msa0523120-mRNA-1 |
| chr3_4 | exon | 76465708 | 76465778 | 76465708 | ID=Msa0523120-mRNA-1:exon:22164;Parent=Msa0523120-mRNA-1 |
| chr3_4 | exon | 76465868 | 76465999 | 76465868 | ID=Msa0523120-mRNA-1:exon:22163;Parent=Msa0523120-mRNA-1 |
| chr3_4 | exon | 76466100 | 76466492 | 76466100 | ID=Msa0523120-mRNA-1:exon:22162;Parent=Msa0523120-mRNA-1 |
| chr3_4 | five_prime_UTR | 76466364 | 76466492 | 76466364 | ID=Msa0523120-mRNA-1:five_prime_utr;Parent=Msa0523120-mRNA-1 |
| chr3_4 | CDS | 76466100 | 76466363 | 76466100 | ID=Msa0523120-mRNA-1:cds;Parent=Msa0523120-mRNA-1 |
| chr3_4 | CDS | 76465868 | 76465999 | 76465868 | ID=Msa0523120-mRNA-1:cds;Parent=Msa0523120-mRNA-1 |
| chr3_4 | CDS | 76465708 | 76465778 | 76465708 | ID=Msa0523120-mRNA-1:cds;Parent=Msa0523120-mRNA-1 |
| chr3_4 | CDS | 76463281 | 76463608 | 76463281 | ID=Msa0523120-mRNA-1:cds;Parent=Msa0523120-mRNA-1 |
| chr3_4 | three_prime_UTR | 76462955 | 76463280 | 76462955 | ID=Msa0523120-mRNA-1:three_prime_utr;Parent=Msa0523120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
