Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719610 | XP_003612737.2 | 97.232 | 289 | 8 | 0 | 26 | 314 | 1 | 289 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719610 | sp|Q9LUJ5|EBP2_ARATH | 65.529 | 293 | 86 | 6 | 27 | 315 | 12 | 293 | 9.91e-125 | 361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719610 | G7KAW7 | 97.232 | 289 | 8 | 0 | 26 | 314 | 1 | 289 | 0.0 | 566 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa0719610 | 0.802225 | 6.205563e-49 | -8.615850e-47 |
| Msa0010490 | Msa0719610 | 0.831503 | 1.608535e-55 | -8.615850e-47 |
| Msa0010500 | Msa0719610 | 0.808454 | 3.073383e-50 | -8.615850e-47 |
| Msa0011960 | Msa0719610 | 0.823712 | 1.195043e-53 | -8.615850e-47 |
| Msa0019390 | Msa0719610 | 0.893865 | 4.220363e-75 | -8.615850e-47 |
| Msa0021220 | Msa0719610 | 0.866760 | 2.253276e-65 | -8.615850e-47 |
| Msa0029260 | Msa0719610 | 0.818946 | 1.503036e-52 | -8.615850e-47 |
| Msa0030200 | Msa0719610 | 0.809515 | 1.821345e-50 | -8.615850e-47 |
| Msa0033950 | Msa0719610 | 0.810608 | 1.059086e-50 | -8.615850e-47 |
| Msa0034030 | Msa0719610 | 0.815729 | 7.964548e-52 | -8.615850e-47 |
| Msa0037770 | Msa0719610 | 0.863094 | 3.181872e-64 | -8.615850e-47 |
| Msa0043660 | Msa0719610 | 0.855490 | 6.092923e-62 | -8.615850e-47 |
| Msa0047160 | Msa0719610 | 0.855879 | 4.691750e-62 | -8.615850e-47 |
| Msa0048550 | Msa0719610 | 0.812693 | 3.728969e-51 | -8.615850e-47 |
| Msa0050090 | Msa0719610 | 0.814174 | 1.761681e-51 | -8.615850e-47 |
| Msa0054440 | Msa0719610 | 0.815952 | 7.100370e-52 | -8.615850e-47 |
| Msa0059040 | Msa0719610 | 0.836332 | 9.957398e-57 | -8.615850e-47 |
| Msa0059110 | Msa0719610 | 0.825948 | 3.548957e-54 | -8.615850e-47 |
| Msa0059950 | Msa0719610 | 0.815636 | 8.352543e-52 | -8.615850e-47 |
| Msa0067630 | Msa0719610 | 0.815810 | 7.639535e-52 | -8.615850e-47 |
| Msa0070700 | Msa0719610 | 0.807266 | 5.496652e-50 | -8.615850e-47 |
| Msa0075500 | Msa0719610 | 0.813102 | 3.032853e-51 | -8.615850e-47 |
| Msa0076780 | Msa0719610 | 0.830791 | 2.406633e-55 | -8.615850e-47 |
| Msa0077900 | Msa0719610 | 0.802797 | 4.730535e-49 | -8.615850e-47 |
| Msa0079820 | Msa0719610 | 0.809638 | 1.713793e-50 | -8.615850e-47 |
| Msa0091560 | Msa0719610 | 0.848837 | 4.750093e-60 | -8.615850e-47 |
| Msa0094470 | Msa0719610 | 0.829977 | 3.805009e-55 | -8.615850e-47 |
| Msa0105620 | Msa0719610 | 0.834840 | 2.374254e-56 | -8.615850e-47 |
| Msa0115130 | Msa0719610 | 0.852737 | 3.794297e-61 | -8.615850e-47 |
| Msa0115400 | Msa0719610 | 0.807399 | 5.151320e-50 | -8.615850e-47 |
| Msa0118590 | Msa0719610 | 0.810247 | 1.267203e-50 | -8.615850e-47 |
| Msa0118710 | Msa0719610 | 0.816561 | 5.191130e-52 | -8.615850e-47 |
| Msa0605000 | Msa0719610 | 0.872706 | 2.588497e-67 | -8.615850e-47 |
| Msa0618930 | Msa0719610 | 0.819217 | 1.304511e-52 | -8.615850e-47 |
| Msa0627380 | Msa0719610 | 0.804489 | 2.108395e-49 | -8.615850e-47 |
| Msa0634890 | Msa0719610 | 0.804627 | 1.972669e-49 | -8.615850e-47 |
| Msa0648780 | Msa0719610 | 0.878376 | 2.952697e-69 | -8.615850e-47 |
| Msa0660850 | Msa0719610 | 0.813130 | 2.991199e-51 | -8.615850e-47 |
| Msa0665100 | Msa0719610 | 0.806658 | 7.393327e-50 | -8.615850e-47 |
| Msa0685140 | Msa0719610 | 0.867354 | 1.455417e-65 | -8.615850e-47 |
| Msa0689260 | Msa0719610 | 0.828510 | 8.637148e-55 | -8.615850e-47 |
| Msa0689440 | Msa0719610 | 0.819844 | 9.381428e-53 | -8.615850e-47 |
| Msa0691290 | Msa0719610 | 0.816895 | 4.368410e-52 | -8.615850e-47 |
| Msa0698800 | Msa0719610 | 0.818520 | 1.878199e-52 | -8.615850e-47 |
| Msa0702370 | Msa0719610 | 0.809021 | 2.324140e-50 | -8.615850e-47 |
| Msa0709040 | Msa0719610 | 0.808043 | 3.758700e-50 | -8.615850e-47 |
| Msa0709730 | Msa0719610 | 0.806947 | 6.420937e-50 | -8.615850e-47 |
| Msa0711780 | Msa0719610 | 0.821505 | 3.895509e-53 | -8.615850e-47 |
| Msa0715650 | Msa0719610 | 0.829082 | 6.279691e-55 | -8.615850e-47 |
| Msa0719420 | Msa0719610 | 0.866759 | 2.254904e-65 | -8.615850e-47 |
| Msa0719610 | Msa0745740 | 0.820685 | 6.018695e-53 | -8.615850e-47 |
| Msa0719610 | Msa0753140 | 0.829843 | 4.103652e-55 | -8.615850e-47 |
| Msa0719610 | Msa0757940 | 0.811001 | 8.707195e-51 | -8.615850e-47 |
| Msa0719610 | Msa0763330 | 0.956753 | 1.399562e-114 | -8.615850e-47 |
| Msa0719610 | Msa0769590 | 0.814849 | 1.249374e-51 | -8.615850e-47 |
| Msa0719610 | Msa0772480 | 0.852510 | 4.403577e-61 | -8.615850e-47 |
| Msa0719610 | Msa0789680 | 0.868031 | 8.833005e-66 | -8.615850e-47 |
| Msa0719610 | Msa0794670 | 0.810933 | 9.009265e-51 | -8.615850e-47 |
| Msa0719610 | Msa0795820 | 0.832586 | 8.685377e-56 | -8.615850e-47 |
| Msa0719610 | Msa0796210 | 0.800608 | 1.330644e-48 | -8.615850e-47 |
| Msa0719610 | Msa0798440 | 0.851348 | 9.409568e-61 | -8.615850e-47 |
| Msa0719610 | Msa0799260 | 0.818848 | 1.582319e-52 | -8.615850e-47 |
| Msa0719610 | Msa0799310 | 0.816685 | 4.867655e-52 | -8.615850e-47 |
| Msa0719610 | Msa0800370 | 0.828312 | 9.644169e-55 | -8.615850e-47 |
| Msa0719610 | Msa0802410 | 0.861107 | 1.294133e-63 | -8.615850e-47 |
| Msa0719610 | Msa0806880 | 0.838773 | 2.356550e-57 | -8.615850e-47 |
| Msa0719610 | Msa0830040 | 0.859876 | 3.053507e-63 | -8.615850e-47 |
| Msa0719610 | Msa0830540 | 0.870726 | 1.173790e-66 | -8.615850e-47 |
| Msa0719610 | Msa0859180 | 0.854538 | 1.151566e-61 | -8.615850e-47 |
| Msa0719610 | Msa0859320 | 0.811870 | 5.638121e-51 | -8.615850e-47 |
| Msa0719610 | Msa0867120 | 0.849978 | 2.284385e-60 | -8.615850e-47 |
| Msa0719610 | Msa0869130 | 0.850717 | 1.417155e-60 | -8.615850e-47 |
| Msa0719610 | Msa0879540 | 0.802085 | 6.633190e-49 | -8.615850e-47 |
| Msa0719610 | Msa0880730 | 0.876648 | 1.181584e-68 | -8.615850e-47 |
| Msa0719610 | Msa0887250 | 0.818183 | 2.238428e-52 | -8.615850e-47 |
| Msa0719610 | Msa0913240 | 0.842201 | 2.987883e-58 | -8.615850e-47 |
| Msa0719610 | Msa0925770 | 0.851493 | 8.561493e-61 | -8.615850e-47 |
| Msa0719610 | Msa0933300 | 0.839440 | 1.583047e-57 | -8.615850e-47 |
| Msa0719610 | Msa0945440 | 0.862086 | 6.500949e-64 | -8.615850e-47 |
| Msa0719610 | Msa0966010 | 0.818352 | 2.050419e-52 | -8.615850e-47 |
| Msa0719610 | Msa0970530 | 0.852664 | 3.980728e-61 | -8.615850e-47 |
| Msa0719610 | Msa0970600 | 0.849658 | 2.806602e-60 | -8.615850e-47 |
| Msa0719610 | Msa0987370 | 0.829298 | 5.567495e-55 | -8.615850e-47 |
| Msa0719610 | Msa0989540 | 0.848545 | 5.723506e-60 | -8.615850e-47 |
| Msa0719610 | Msa1006840 | 0.805293 | 1.431389e-49 | -8.615850e-47 |
| Msa0719610 | Msa1072710 | 0.845303 | 4.417072e-59 | -8.615850e-47 |
| Msa0719610 | Msa1077030 | 0.811836 | 5.736142e-51 | -8.615850e-47 |
| Msa0719610 | Msa1083560 | 0.813124 | 2.999997e-51 | -8.615850e-47 |
| Msa0719610 | Msa1088290 | 0.827624 | 1.411723e-54 | -8.615850e-47 |
| Msa0719610 | Msa1089320 | 0.805046 | 1.612246e-49 | -8.615850e-47 |
| Msa0719610 | Msa1105510 | 0.830158 | 3.437760e-55 | -8.615850e-47 |
| Msa0719610 | Msa1123770 | 0.815999 | 6.932328e-52 | -8.615850e-47 |
| Msa0719610 | Msa1126830 | 0.828705 | 7.751242e-55 | -8.615850e-47 |
| Msa0719610 | Msa1126850 | 0.800743 | 1.249067e-48 | -8.615850e-47 |
| Msa0719610 | Msa1128570 | 0.816106 | 6.560685e-52 | -8.615850e-47 |
| Msa0719610 | Msa1132660 | 0.817675 | 2.915366e-52 | -8.615850e-47 |
| Msa0719610 | Msa1135890 | 0.805916 | 1.059717e-49 | -8.615850e-47 |
| Msa0719610 | Msa1137700 | 0.805066 | 1.597114e-49 | -8.615850e-47 |
| Msa0719610 | Msa1144040 | 0.810652 | 1.036036e-50 | -8.615850e-47 |
| Msa0719610 | Msa1153060 | 0.851248 | 1.004560e-60 | -8.615850e-47 |
| Msa0719610 | Msa1160590 | 0.847128 | 1.406627e-59 | -8.615850e-47 |
| Msa0719610 | Msa1165780 | 0.853771 | 1.917386e-61 | -8.615850e-47 |
| Msa0719610 | Msa1169910 | 0.806340 | 8.626741e-50 | -8.615850e-47 |
| Msa0719610 | Msa1181250 | 0.804410 | 2.189722e-49 | -8.615850e-47 |
| Msa0719610 | Msa1181330 | 0.804072 | 2.574549e-49 | -8.615850e-47 |
| Msa0719610 | Msa1197320 | 0.822037 | 2.935348e-53 | -8.615850e-47 |
| Msa0719610 | Msa1209200 | 0.878221 | 3.347016e-69 | -8.615850e-47 |
| Msa0719610 | Msa1209260 | 0.890411 | 1.009251e-73 | -8.615850e-47 |
| Msa0719610 | Msa1209760 | 0.823001 | 1.751553e-53 | -8.615850e-47 |
| Msa0719610 | Msa1217580 | 0.800525 | 1.383593e-48 | -8.615850e-47 |
| Msa0719610 | Msa1218500 | 0.883050 | 6.227898e-71 | -8.615850e-47 |
| Msa0719610 | Msa1224810 | 0.807040 | 6.137044e-50 | -8.615850e-47 |
| Msa0719610 | Msa1250790 | 0.820452 | 6.808688e-53 | -8.615850e-47 |
| Msa0719610 | Msa1259060 | 0.809846 | 1.546002e-50 | -8.615850e-47 |
| Msa0719610 | Msa1265630 | 0.857760 | 1.310312e-62 | -8.615850e-47 |
| Msa0719610 | Msa1275680 | 0.820915 | 5.330167e-53 | -8.615850e-47 |
| Msa0719610 | Msa1302380 | 0.844104 | 9.296421e-59 | -8.615850e-47 |
| Msa0719610 | Msa1307180 | 0.811453 | 6.947025e-51 | -8.615850e-47 |
| Msa0719610 | Msa1316360 | 0.824895 | 6.300488e-54 | -8.615850e-47 |
| Msa0719610 | Msa1331710 | 0.832186 | 1.091385e-55 | -8.615850e-47 |
| Msa0719610 | Msa1332590 | 0.863741 | 2.004584e-64 | -8.615850e-47 |
| Msa0719610 | Msa1336560 | 0.823296 | 1.494806e-53 | -8.615850e-47 |
| Msa0719610 | Msa1351540 | 0.860128 | 2.563876e-63 | -8.615850e-47 |
| Msa0719610 | Msa1355700 | 0.813383 | 2.631734e-51 | -8.615850e-47 |
| Msa0719610 | Msa1356400 | 0.812280 | 4.590851e-51 | -8.615850e-47 |
| Msa0719610 | Msa1358250 | 0.827738 | 1.325409e-54 | -8.615850e-47 |
| Msa0719610 | Msa1359970 | 0.804082 | 2.562552e-49 | -8.615850e-47 |
| Msa0719610 | Msa1362090 | 0.853342 | 2.545269e-61 | -8.615850e-47 |
| Msa0719610 | Msa1364210 | 0.804433 | 2.165233e-49 | -8.615850e-47 |
| Msa0719610 | Msa1381480 | 0.806631 | 7.489929e-50 | -8.615850e-47 |
| Msa0719610 | Msa1384190 | 0.805198 | 1.498982e-49 | -8.615850e-47 |
| Msa0719610 | Msa1385720 | 0.814234 | 1.708816e-51 | -8.615850e-47 |
| Msa0719610 | Msa1392780 | 0.800956 | 1.130064e-48 | -8.615850e-47 |
| Msa0719610 | Msa1394290 | 0.828900 | 6.951157e-55 | -8.615850e-47 |
| Msa0719610 | Msa1395730 | 0.804950 | 1.689318e-49 | -8.615850e-47 |
| Msa0719610 | Msa1400220 | 0.815036 | 1.135706e-51 | -8.615850e-47 |
| Msa0719610 | Msa1400580 | 0.820112 | 8.144817e-53 | -8.615850e-47 |
| Msa0719610 | Msa1413500 | 0.839272 | 1.750269e-57 | -8.615850e-47 |
| Msa0719610 | Msa1419870 | 0.860790 | 1.616013e-63 | -8.615850e-47 |
| Msa0719610 | Msa1426370 | 0.801234 | 9.912786e-49 | -8.615850e-47 |
| Msa0719610 | Msa1434090 | 0.821342 | 4.249724e-53 | -8.615850e-47 |
| Msa0719610 | Msa1436520 | 0.857772 | 1.299664e-62 | -8.615850e-47 |
| Msa0719610 | Msa1457920 | 0.845664 | 3.526104e-59 | -8.615850e-47 |
| Msa0719610 | Msa1458210 | 0.829126 | 6.126508e-55 | -8.615850e-47 |
| Msa0719610 | Msa1458810 | 0.830366 | 3.058552e-55 | -8.615850e-47 |
| Msa0126840 | Msa0719610 | 0.804970 | 1.673009e-49 | -8.615850e-47 |
| Msa0127020 | Msa0719610 | 0.815485 | 9.025459e-52 | -8.615850e-47 |
| Msa0128050 | Msa0719610 | 0.823652 | 1.234581e-53 | -8.615850e-47 |
| Msa0137550 | Msa0719610 | 0.837883 | 3.995456e-57 | -8.615850e-47 |
| Msa0141660 | Msa0719610 | 0.834222 | 3.395989e-56 | -8.615850e-47 |
| Msa0144370 | Msa0719610 | 0.815603 | 8.495907e-52 | -8.615850e-47 |
| Msa0146770 | Msa0719610 | 0.868538 | 6.061225e-66 | -8.615850e-47 |
| Msa0149440 | Msa0719610 | 0.814904 | 1.214521e-51 | -8.615850e-47 |
| Msa0158000 | Msa0719610 | 0.814721 | 1.334017e-51 | -8.615850e-47 |
| Msa0159170 | Msa0719610 | 0.848332 | 6.556076e-60 | -8.615850e-47 |
| Msa0165660 | Msa0719610 | 0.810142 | 1.335066e-50 | -8.615850e-47 |
| Msa0168230 | Msa0719610 | 0.820168 | 7.909766e-53 | -8.615850e-47 |
| Msa0169280 | Msa0719610 | 0.813427 | 2.574095e-51 | -8.615850e-47 |
| Msa0169300 | Msa0719610 | 0.816848 | 4.475880e-52 | -8.615850e-47 |
| Msa0189300 | Msa0719610 | 0.868330 | 7.073123e-66 | -8.615850e-47 |
| Msa0202410 | Msa0719610 | 0.811034 | 8.566115e-51 | -8.615850e-47 |
| Msa0221030 | Msa0719610 | 0.802021 | 6.835139e-49 | -8.615850e-47 |
| Msa0228120 | Msa0719610 | 0.814142 | 1.791012e-51 | -8.615850e-47 |
| Msa0228170 | Msa0719610 | 0.817294 | 3.552583e-52 | -8.615850e-47 |
| Msa0229170 | Msa0719610 | 0.808244 | 3.406002e-50 | -8.615850e-47 |
| Msa0231100 | Msa0719610 | 0.821643 | 3.621124e-53 | -8.615850e-47 |
| Msa0231660 | Msa0719610 | 0.864629 | 1.059938e-64 | -8.615850e-47 |
| Msa0387910 | Msa0719610 | 0.805581 | 1.246104e-49 | -8.615850e-47 |
| Msa0388700 | Msa0719610 | 0.842773 | 2.107222e-58 | -8.615850e-47 |
| Msa0393940 | Msa0719610 | 0.812370 | 4.386208e-51 | -8.615850e-47 |
| Msa0397540 | Msa0719610 | 0.804075 | 2.570277e-49 | -8.615850e-47 |
| Msa0398810 | Msa0719610 | 0.814136 | 1.796044e-51 | -8.615850e-47 |
| Msa0403500 | Msa0719610 | 0.863361 | 2.629471e-64 | -8.615850e-47 |
| Msa0409090 | Msa0719610 | 0.837211 | 5.941869e-57 | -8.615850e-47 |
| Msa0427580 | Msa0719610 | 0.801345 | 9.408225e-49 | -8.615850e-47 |
| Msa0430060 | Msa0719610 | 0.800049 | 1.729456e-48 | -8.615850e-47 |
| Msa0430150 | Msa0719610 | 0.802716 | 4.915298e-49 | -8.615850e-47 |
| Msa0437020 | Msa0719610 | 0.824973 | 6.038718e-54 | -8.615850e-47 |
| Msa0446050 | Msa0719610 | 0.811636 | 6.341928e-51 | -8.615850e-47 |
| Msa0467220 | Msa0719610 | 0.828629 | 8.084233e-55 | -8.615850e-47 |
| Msa0481030 | Msa0719610 | 0.836124 | 1.124490e-56 | -8.615850e-47 |
| Msa0481280 | Msa0719610 | 0.808327 | 3.269912e-50 | -8.615850e-47 |
| Msa0482130 | Msa0719610 | 0.866977 | 1.920388e-65 | -8.615850e-47 |
| Msa0245430 | Msa0719610 | 0.803665 | 3.128135e-49 | -8.615850e-47 |
| Msa0262480 | Msa0719610 | 0.804943 | 1.694446e-49 | -8.615850e-47 |
| Msa0275360 | Msa0719610 | 0.800374 | 1.485247e-48 | -8.615850e-47 |
| Msa0296050 | Msa0719610 | -0.808759 | 2.644272e-50 | -8.615850e-47 |
| Msa0300350 | Msa0719610 | 0.828600 | 8.215594e-55 | -8.615850e-47 |
| Msa0309750 | Msa0719610 | 0.809725 | 1.641807e-50 | -8.615850e-47 |
| Msa0325590 | Msa0719610 | 0.850380 | 1.762847e-60 | -8.615850e-47 |
| Msa0345390 | Msa0719610 | 0.803457 | 3.454893e-49 | -8.615850e-47 |
| Msa0351990 | Msa0719610 | 0.813833 | 2.094862e-51 | -8.615850e-47 |
| Msa0357900 | Msa0719610 | 0.825396 | 4.796336e-54 | -8.615850e-47 |
| Msa0489410 | Msa0719610 | 0.847193 | 1.350094e-59 | -8.615850e-47 |
| Msa0493410 | Msa0719610 | 0.810929 | 9.025959e-51 | -8.615850e-47 |
| Msa0500470 | Msa0719610 | 0.835229 | 1.895285e-56 | -8.615850e-47 |
| Msa0502090 | Msa0719610 | 0.816626 | 5.018662e-52 | -8.615850e-47 |
| Msa0542090 | Msa0719610 | 0.859195 | 4.891418e-63 | -8.615850e-47 |
| Msa0542130 | Msa0719610 | 0.863190 | 2.970151e-64 | -8.615850e-47 |
| Msa0550540 | Msa0719610 | 0.806932 | 6.469541e-50 | -8.615850e-47 |
| Msa0550570 | Msa0719610 | 0.803680 | 3.106185e-49 | -8.615850e-47 |
| Msa0554290 | Msa0719610 | 0.877095 | 8.268470e-69 | -8.615850e-47 |
| Msa0566100 | Msa0719610 | 0.824280 | 8.792512e-54 | -8.615850e-47 |
| Msa0573140 | Msa0719610 | 0.823030 | 1.724476e-53 | -8.615850e-47 |
| Msa0581110 | Msa0719610 | 0.828171 | 1.042966e-54 | -8.615850e-47 |
| Msa0581280 | Msa0719610 | 0.899736 | 1.474094e-77 | -8.615850e-47 |
| Msa0601150 | Msa0719610 | 0.818182 | 2.240365e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719610 | MtrunA17_Chr5g0410311 | 97.232 | 289 | 8 | 0 | 26 | 314 | 1 | 289 | 0.0 | 566 |
| Msa0719610 | MtrunA17_Chr8g0371671 | 84.536 | 291 | 41 | 3 | 26 | 315 | 1 | 288 | 1.12e-150 | 424 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719610 | AT3G22660.1 | 65.529 | 293 | 86 | 6 | 27 | 315 | 12 | 293 | 1.01e-125 | 361 |
Find 86 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGCCTCCAAAACCAAATT+TGG | 0.189093 | 5_1:+15009703 | None:intergenic |
| GCTGAAACAACTAATGATTT+TGG | 0.204488 | 5_1:-15009656 | Msa0719610:CDS |
| GATACTAAGAATGCCAAATT+TGG | 0.209577 | 5_1:-15009716 | Msa0719610:CDS |
| GTTAAGTTGATAAACTTTAT+TGG | 0.245084 | 5_1:-15009476 | Msa0719610:three_prime_UTR |
| CAACTTAACATGATCTAAAT+AGG | 0.260023 | 5_1:+15009490 | None:intergenic |
| AAGAATGCCAAATTTGGTTT+TGG | 0.274042 | 5_1:-15009710 | Msa0719610:CDS |
| GGTTAACAAAGCATCAAAAT+TGG | 0.291153 | 5_1:+15009427 | None:intergenic |
| ATGGAGGTGCCTTTGATTAA+TGG | 0.295822 | 5_1:-15010457 | Msa0719610:CDS |
| TCAAAGCTCAAAGACTTATC+TGG | 0.326167 | 5_1:+15009857 | None:intergenic |
| TCATTCAAATCCCATATAAA+AGG | 0.342842 | 5_1:+15012374 | None:intergenic |
| AGAAAGGGCCAAGCAGAAAA+AGG | 0.351345 | 5_1:-15009951 | Msa0719610:CDS |
| ATCTACAATCGTACCTTCAA+TGG | 0.357382 | 5_1:+15012319 | None:intergenic |
| TCAGTTTCACCGTCAATCAT+TGG | 0.370634 | 5_1:+15010430 | None:intergenic |
| TCTGCTTCTTCGATCCCTTC+CGG | 0.371874 | 5_1:+15009684 | None:intergenic |
| GAGCAGTAAACGTAACAAAT+TGG | 0.372381 | 5_1:+15009406 | None:intergenic |
| TGCTTCCAATCCACATTCTC+AGG | 0.372391 | 5_1:+15010280 | None:intergenic |
| TGACGGTGAAACTGAAGATT+TGG | 0.372926 | 5_1:-15010422 | Msa0719610:CDS |
| TTCAGTAAGGGTTCTGCTGC+TGG | 0.381325 | 5_1:-15009629 | Msa0719610:CDS |
| TTACCTCCTGACCGATCTCC+TGG | 0.396701 | 5_1:+15009785 | None:intergenic |
| AGACAATCTCTTTGCTTCCC+TGG | 0.401049 | 5_1:+15010000 | None:intergenic |
| AGATAAGTCTTTGAGCTTTG+AGG | 0.404345 | 5_1:-15009855 | Msa0719610:CDS |
| CTGAAGAGAGAAGAAAGGCC+AGG | 0.422247 | 5_1:-15010018 | Msa0719610:CDS |
| CTCTCCATTGATATTGATCA+AGG | 0.429280 | 5_1:-15010253 | Msa0719610:CDS |
| GTCGTTGTTGATCCCATTGA+AGG | 0.447767 | 5_1:-15012332 | Msa0719610:intron |
| TCTTCTGAATCTGATTCAAA+TGG | 0.456186 | 5_1:+15010385 | None:intergenic |
| AGTCACAGAAATTGAAAGAA+AGG | 0.458750 | 5_1:-15009967 | Msa0719610:CDS |
| AATGCGGCTATGGCACAATC+TGG | 0.459141 | 5_1:-15009544 | Msa0719610:three_prime_UTR |
| TAGTCAGCAGGTCTCAAGAA+AGG | 0.478435 | 5_1:+15010124 | None:intergenic |
| CGTGTCATGGAATGCGGCTA+TGG | 0.478909 | 5_1:-15009554 | Msa0719610:three_prime_UTR |
| CTTTGAGAAGCTTGAGTCGA+TGG | 0.481104 | 5_1:-15010152 | Msa0719610:CDS |
| TGCTGACTATTACGCAGAAA+TGG | 0.488469 | 5_1:-15010110 | Msa0719610:CDS |
| TCTACAATCGTACCTTCAAT+GGG | 0.490646 | 5_1:+15012320 | None:intergenic |
| CTCCCCTTGATCAATATCAA+TGG | 0.492911 | 5_1:+15010249 | None:intergenic |
| CCGATCTCCTGGAGATACTC+CGG | 0.494759 | 5_1:+15009796 | None:intergenic |
| AGGAGATCGGTCAGGAGGTA+AGG | 0.497659 | 5_1:-15009783 | Msa0719610:CDS |
| AGTCTTTGAGCTTTGAGGAT+GGG | 0.501140 | 5_1:-15009850 | Msa0719610:CDS |
| AGTCAGCAGGTCTCAAGAAA+GGG | 0.501463 | 5_1:+15010125 | None:intergenic |
| GGGAGATAGCCACATGGAAA+AGG | 0.502899 | 5_1:-15010083 | Msa0719610:CDS |
| CATAAGCTGGCCTGAGAATG+TGG | 0.503617 | 5_1:-15010290 | Msa0719610:CDS |
| GTCACAGAAATTGAAAGAAA+GGG | 0.504083 | 5_1:-15009966 | Msa0719610:CDS |
| GCAAAGCAAGCTATGGGAAA+GGG | 0.507585 | 5_1:-15009761 | Msa0719610:CDS |
| ATTAGATGAGAAGCGGAAGA+TGG | 0.510158 | 5_1:-15010047 | Msa0719610:CDS |
| GGCATTGGAGGGAACTAGAC+AGG | 0.514311 | 5_1:-15010176 | Msa0719610:CDS |
| AGGTAAGGCAAAGCAAGCTA+TGG | 0.517763 | 5_1:-15009768 | Msa0719610:CDS |
| TTTGAGAAGCTTGAGTCGAT+GGG | 0.525398 | 5_1:-15010151 | Msa0719610:CDS |
| GGAGGCTGAAGAGAGAAGAA+AGG | 0.530598 | 5_1:-15010023 | Msa0719610:CDS |
| TTTCTCACAAAGGCGTGTCA+TGG | 0.534530 | 5_1:-15009567 | Msa0719610:three_prime_UTR |
| CAAAGACTTATCTGGAGCAT+CGG | 0.536868 | 5_1:+15009865 | None:intergenic |
| ATATGGGATTTGAATGAAGT+CGG | 0.538746 | 5_1:-15012368 | Msa0719610:CDS |
| AGATGAGAAGCGGAAGATGG+AGG | 0.539024 | 5_1:-15010044 | Msa0719610:CDS |
| GATGCTATATTAGATAAACT+TGG | 0.546950 | 5_1:-15010316 | Msa0719610:CDS |
| AGCAAAGAGATTGTCTAAAG+AGG | 0.557828 | 5_1:-15009993 | Msa0719610:CDS |
| AAGAGGCCCGGAGTATCTCC+AGG | 0.558097 | 5_1:-15009803 | Msa0719610:CDS |
| CTCCATTGATATTGATCAAG+GGG | 0.559298 | 5_1:-15010251 | Msa0719610:CDS |
| GTATCTCCAGGAGATCGGTC+AGG | 0.562327 | 5_1:-15009791 | Msa0719610:CDS |
| CGATCTCCTGGAGATACTCC+GGG | 0.563080 | 5_1:+15009797 | None:intergenic |
| AGTAGATGTGAACGATGACT+TGG | 0.565329 | 5_1:-15010224 | Msa0719610:CDS |
| ATTTCTGCGTAATAGTCAGC+AGG | 0.568461 | 5_1:+15010112 | None:intergenic |
| TGTCTCTACTAACACAGGCT+TGG | 0.570044 | 5_1:+15009349 | None:intergenic |
| ATAAACTTGGAGACATAAGC+TGG | 0.571619 | 5_1:-15010303 | Msa0719610:CDS |
| TGAAACTGAAGATTTGGATG+AGG | 0.572001 | 5_1:-15010416 | Msa0719610:CDS |
| CCGGAGTATCTCCAGGAGAT+CGG | 0.576336 | 5_1:-15009796 | Msa0719610:CDS |
| AAGTCTTTGAGCTTTGAGGA+TGG | 0.577328 | 5_1:-15009851 | Msa0719610:CDS |
| TGAAGAGAGAAGAAAGGCCA+GGG | 0.579670 | 5_1:-15010017 | Msa0719610:CDS |
| CATCGACTCAAGCTTCTCAA+AGG | 0.582387 | 5_1:+15010153 | None:intergenic |
| GGCAAAGCAAGCTATGGGAA+AGG | 0.584114 | 5_1:-15009762 | Msa0719610:CDS |
| ATTGGATCACCATTAATCAA+AGG | 0.591452 | 5_1:+15010448 | None:intergenic |
| TCTCCATTGATATTGATCAA+GGG | 0.594778 | 5_1:-15010252 | Msa0719610:CDS |
| AATGGTGATCCAATGATTGA+CGG | 0.595326 | 5_1:-15010439 | Msa0719610:CDS |
| GGTAAGGCAAAGCAAGCTAT+GGG | 0.598074 | 5_1:-15009767 | Msa0719610:CDS |
| GGAAGCAGAGACAACAGAGT+GGG | 0.599709 | 5_1:-15009901 | Msa0719610:CDS |
| ACATTGAATCTGTTAAGAAG+TGG | 0.600860 | 5_1:-15009925 | Msa0719610:CDS |
| TGAGAAGCGGAAGATGGAGG+AGG | 0.603783 | 5_1:-15010041 | Msa0719610:CDS |
| TTGAATCTGTTAAGAAGTGG+AGG | 0.608378 | 5_1:-15009922 | Msa0719610:CDS |
| CTATTACGCAGAAATGGTGA+AGG | 0.608653 | 5_1:-15010104 | Msa0719610:CDS |
| GTCGGCTATTAGATGAGAAG+CGG | 0.609331 | 5_1:-15010054 | Msa0719610:CDS |
| GCTGGCCTGAGAATGTGGAT+TGG | 0.611875 | 5_1:-15010285 | Msa0719610:CDS |
| ACATGGAAAAGGTGAAAAGT+CGG | 0.619320 | 5_1:-15010072 | Msa0719610:CDS |
| CAACAGAGTGGGTTTGCTGA+CGG | 0.625190 | 5_1:-15009890 | Msa0719610:CDS |
| CAAAGGCGTGTCATGGAATG+CGG | 0.630244 | 5_1:-15009560 | Msa0719610:three_prime_UTR |
| AGATATGTCTCTACTAACAC+AGG | 0.644101 | 5_1:+15009344 | None:intergenic |
| AGGAAGCAGAGACAACAGAG+TGG | 0.651328 | 5_1:-15009902 | Msa0719610:CDS |
| CATTGATATTGATCAAGGGG+AGG | 0.657330 | 5_1:-15010248 | Msa0719610:CDS |
| TCTCCAGGAGATCGGTCAGG+AGG | 0.664692 | 5_1:-15009788 | Msa0719610:CDS |
| TATTACGCAGAAATGGTGAA+GGG | 0.681147 | 5_1:-15010103 | Msa0719610:CDS |
| GGTGAAGGGAGATAGCCACA+TGG | 0.757517 | 5_1:-15010089 | Msa0719610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGAGTTTTTTTTTTTTTT+TGG | + | chr5_1:15009928-15009947 | None:intergenic | 10.0% |
| !!! | ATTTGTACTATATTTTTAGA+TGG | - | chr5_1:15009503-15009522 | Msa0719610:three_prime_UTR | 15.0% |
| !!! | TATAGAATATTTTTACCATT+TGG | + | chr5_1:15009794-15009813 | None:intergenic | 15.0% |
| !! | AAAAAATGTTCAACTAAAAT+AGG | + | chr5_1:15009960-15009979 | None:intergenic | 15.0% |
| !!! | AAATTTTTTTAGGGTTTAAA+GGG | + | chr5_1:15010276-15010295 | None:intergenic | 15.0% |
| !!! | AATCAGTTGAAATTTTTTTA+GGG | + | chr5_1:15010285-15010304 | None:intergenic | 15.0% |
| !!! | TTTCAATTTTTCCAAATTAT+TGG | + | chr5_1:15010698-15010717 | None:intergenic | 15.0% |
| !! | ATATGACATCATTTGTATTA+AGG | + | chr5_1:15009616-15009635 | None:intergenic | 20.0% |
| !! | TCATAAAAACTCAAAATTAG+AGG | - | chr5_1:15009863-15009882 | Msa0719610:CDS | 20.0% |
| !! | TGCAAATTGTTAAATCAAAA+TGG | + | chr5_1:15009903-15009922 | None:intergenic | 20.0% |
| !!! | AGGTGAAATGAATTTTTTTT+AGG | - | chr5_1:15010065-15010084 | Msa0719610:CDS | 20.0% |
| !!! | GGTGAAATGAATTTTTTTTA+GGG | - | chr5_1:15010066-15010085 | Msa0719610:CDS | 20.0% |
| !!! | GTGAAATGAATTTTTTTTAG+GGG | - | chr5_1:15010067-15010086 | Msa0719610:CDS | 20.0% |
| !!! | GAAATTTTTTTAGGGTTTAA+AGG | + | chr5_1:15010277-15010296 | None:intergenic | 20.0% |
| !!! | GAATCAGTTGAAATTTTTTT+AGG | + | chr5_1:15010286-15010305 | None:intergenic | 20.0% |
| !! | GTTTCTTAGTTGAAAATATT+GGG | - | chr5_1:15010479-15010498 | Msa0719610:intron | 20.0% |
| !!! | TCACTGTTATTTATTTCAAT+TGG | - | chr5_1:15010522-15010541 | Msa0719610:intron | 20.0% |
| !!! | CACTGTTATTTATTTCAATT+GGG | - | chr5_1:15010523-15010542 | Msa0719610:intron | 20.0% |
| !!! | TTTCAATTGGGTTTTTTTAT+TGG | - | chr5_1:15010535-15010554 | Msa0719610:intron | 20.0% |
| !! | ATTATTTATGTTACTAGAGA+CGG | - | chr5_1:15010641-15010660 | Msa0719610:intron | 20.0% |
| !! | AATTAACACAAATGATTGAA+GGG | + | chr5_1:15010983-15011002 | None:intergenic | 20.0% |
| !!! | TGATATTTTTATAGATCAGA+TGG | - | chr5_1:15011251-15011270 | Msa0719610:intron | 20.0% |
| !!! | AGAATTTTAATCAAATCTGT+AGG | - | chr5_1:15012206-15012225 | Msa0719610:intron | 20.0% |
| !!! | GTTAAGTTGATAAACTTTAT+TGG | - | chr5_1:15012251-15012270 | Msa0719610:intron | 20.0% |
| ! | TCATTCAAATCCCATATAAA+AGG | + | chr5_1:15009356-15009375 | None:intergenic | 25.0% |
| ! | GTCTTTGTTGAATATAAGTA+AGG | - | chr5_1:15009561-15009580 | Msa0719610:three_prime_UTR | 25.0% |
| !! | TTTTCGTGAAATGAAAGTTT+AGG | - | chr5_1:15010045-15010064 | Msa0719610:CDS | 25.0% |
| ! | TGACAAAAACAAAACATAAG+AGG | - | chr5_1:15010182-15010201 | Msa0719610:CDS | 25.0% |
| ! | AGGAAAATAAAGGTTTAGAA+AGG | + | chr5_1:15010341-15010360 | None:intergenic | 25.0% |
| !!! | GTTTTTTGTTTGTTCTGAAT+AGG | - | chr5_1:15010457-15010476 | Msa0719610:CDS | 25.0% |
| ! | GGTTTCTTAGTTGAAAATAT+TGG | - | chr5_1:15010478-15010497 | Msa0719610:intron | 25.0% |
| ! | TTATTTATGTTACTAGAGAC+GGG | - | chr5_1:15010642-15010661 | Msa0719610:intron | 25.0% |
| ! | CAATTAACACAAATGATTGA+AGG | + | chr5_1:15010984-15011003 | None:intergenic | 25.0% |
| ! | AGAAAAGTAAAAACATCAGA+GGG | + | chr5_1:15011144-15011163 | None:intergenic | 25.0% |
| !!! | TATTTTTATAGATCAGATGG+AGG | - | chr5_1:15011254-15011273 | Msa0719610:intron | 25.0% |
| ! | GATGCTATATTAGATAAACT+TGG | - | chr5_1:15011411-15011430 | Msa0719610:intron | 25.0% |
| !! | TTAGTATCTCTTTTCTTTTG+CGG | + | chr5_1:15011999-15012018 | None:intergenic | 25.0% |
| ! | CAACTTAACATGATCTAAAT+AGG | + | chr5_1:15012240-15012259 | None:intergenic | 25.0% |
| ATATGGGATTTGAATGAAGT+CGG | - | chr5_1:15009359-15009378 | Msa0719610:three_prime_UTR | 30.0% | |
| ! | CATAGAGTCATTGATGATAT+GGG | + | chr5_1:15009689-15009708 | None:intergenic | 30.0% |
| ! | ACATAGAGTCATTGATGATA+TGG | + | chr5_1:15009690-15009709 | None:intergenic | 30.0% |
| ACACCTAAACATGATTGTTT+GGG | + | chr5_1:15009726-15009745 | None:intergenic | 30.0% | |
| ! | CTTATGTTTTCTTGTCCAAA+TGG | - | chr5_1:15009776-15009795 | Msa0719610:CDS | 30.0% |
| !! | CTAGTAAAGTTTGATTTTGC+AGG | - | chr5_1:15010126-15010145 | Msa0719610:CDS | 30.0% |
| ! | TTTCTCTCTTTGACTGTTTT+GGG | + | chr5_1:15010152-15010171 | None:intergenic | 30.0% |
| ! | TTTTCTCTCTTTGACTGTTT+TGG | + | chr5_1:15010153-15010172 | None:intergenic | 30.0% |
| AAACAAAACATAAGAGGACT+CGG | - | chr5_1:15010188-15010207 | Msa0719610:CDS | 30.0% | |
| !!! | TTTTTTTAGGGTTTAAAGGG+AGG | + | chr5_1:15010273-15010292 | None:intergenic | 30.0% |
| AGAATTAACGCGAAAATACA+TGG | + | chr5_1:15010370-15010389 | None:intergenic | 30.0% | |
| GATGAACTTGTGATATTGTT+TGG | - | chr5_1:15010613-15010632 | Msa0719610:intron | 30.0% | |
| TGACTAAATAAACCATTGTG+TGG | + | chr5_1:15011056-15011075 | None:intergenic | 30.0% | |
| GAAAAGTAAAAACATCAGAG+GGG | + | chr5_1:15011143-15011162 | None:intergenic | 30.0% | |
| CAGAAAAGTAAAAACATCAG+AGG | + | chr5_1:15011145-15011164 | None:intergenic | 30.0% | |
| GTTTATCCTGTAAAATAACG+AGG | - | chr5_1:15011164-15011183 | Msa0719610:intron | 30.0% | |
| !! | GATTTTCCTCGTTATTTTAC+AGG | + | chr5_1:15011173-15011192 | None:intergenic | 30.0% |
| ! | TTTTGTATGCTAGATTGCAT+TGG | - | chr5_1:15011197-15011216 | Msa0719610:intron | 30.0% |
| ATTGGATCACCATTAATCAA+AGG | + | chr5_1:15011282-15011301 | None:intergenic | 30.0% | |
| TCTTCTGAATCTGATTCAAA+TGG | + | chr5_1:15011345-15011364 | None:intergenic | 30.0% | |
| !!! | TTATTCACTGCAGTTTTAGA+TGG | + | chr5_1:15011387-15011406 | None:intergenic | 30.0% |
| TCTCCATTGATATTGATCAA+GGG | - | chr5_1:15011475-15011494 | Msa0719610:intron | 30.0% | |
| AGTCACAGAAATTGAAAGAA+AGG | - | chr5_1:15011760-15011779 | Msa0719610:intron | 30.0% | |
| GTCACAGAAATTGAAAGAAA+GGG | - | chr5_1:15011761-15011780 | Msa0719610:intron | 30.0% | |
| ACATTGAATCTGTTAAGAAG+TGG | - | chr5_1:15011802-15011821 | Msa0719610:intron | 30.0% | |
| GATACTAAGAATGCCAAATT+TGG | - | chr5_1:15012011-15012030 | Msa0719610:intron | 30.0% | |
| !! | AAGAATGCCAAATTTGGTTT+TGG | - | chr5_1:15012017-15012036 | Msa0719610:intron | 30.0% |
| ! | GCTGAAACAACTAATGATTT+TGG | - | chr5_1:15012071-15012090 | Msa0719610:intron | 30.0% |
| ! | GAAACAACTAATGATTTTGG+CGG | - | chr5_1:15012074-15012093 | Msa0719610:intron | 30.0% |
| !! | AAACAACTAATGATTTTGGC+GGG | - | chr5_1:15012075-15012094 | Msa0719610:intron | 30.0% |
| !!! | CTTGTTTTGTTTTCTCACAA+AGG | - | chr5_1:15012150-15012169 | Msa0719610:intron | 30.0% |
| ! | GGTTAACAAAGCATCAAAAT+TGG | + | chr5_1:15012303-15012322 | None:intergenic | 30.0% |
| TCTACAATCGTACCTTCAAT+GGG | + | chr5_1:15009410-15009429 | None:intergenic | 35.0% | |
| ATCTACAATCGTACCTTCAA+TGG | + | chr5_1:15009411-15009430 | None:intergenic | 35.0% | |
| CGATTGTAGATAAAGATTCC+TGG | - | chr5_1:15009420-15009439 | Msa0719610:three_prime_UTR | 35.0% | |
| GACACCTAAACATGATTGTT+TGG | + | chr5_1:15009727-15009746 | None:intergenic | 35.0% | |
| AATCATGTTTAGGTGTCCAA+AGG | - | chr5_1:15009730-15009749 | Msa0719610:CDS | 35.0% | |
| ATCATGTTTAGGTGTCCAAA+GGG | - | chr5_1:15009731-15009750 | Msa0719610:CDS | 35.0% | |
| AACAAAACATAAGAGGACTC+GGG | - | chr5_1:15010189-15010208 | Msa0719610:CDS | 35.0% | |
| ! | AACTTTTCCAACGTAGAACA+CGG | - | chr5_1:15010310-15010329 | Msa0719610:CDS | 35.0% |
| ! | ATGGCGGAAAAGGAAAATAA+AGG | + | chr5_1:15010351-15010370 | None:intergenic | 35.0% |
| ATTAACGCGAAAATACATGG+CGG | + | chr5_1:15010367-15010386 | None:intergenic | 35.0% | |
| ! | GGAAAGTGTATTATGTTTCG+AGG | - | chr5_1:15010663-15010682 | Msa0719610:intron | 35.0% |
| !! | TTTTCGACGAAGATTAGTCA+TGG | - | chr5_1:15010936-15010955 | Msa0719610:intron | 35.0% |
| ! | TTTCGACGAAGATTAGTCAT+GGG | - | chr5_1:15010937-15010956 | Msa0719610:intron | 35.0% |
| AATGGTGATCCAATGATTGA+CGG | - | chr5_1:15011288-15011307 | Msa0719610:intron | 35.0% | |
| TGAAACTGAAGATTTGGATG+AGG | - | chr5_1:15011311-15011330 | Msa0719610:intron | 35.0% | |
| ATAAACTTGGAGACATAAGC+TGG | - | chr5_1:15011424-15011443 | Msa0719610:intron | 35.0% | |
| CTCTCCATTGATATTGATCA+AGG | - | chr5_1:15011474-15011493 | Msa0719610:intron | 35.0% | |
| CTCCATTGATATTGATCAAG+GGG | - | chr5_1:15011476-15011495 | Msa0719610:intron | 35.0% | |
| TATTACGCAGAAATGGTGAA+GGG | - | chr5_1:15011624-15011643 | Msa0719610:intron | 35.0% | |
| ACATGGAAAAGGTGAAAAGT+CGG | - | chr5_1:15011655-15011674 | Msa0719610:intron | 35.0% | |
| AGCAAAGAGATTGTCTAAAG+AGG | - | chr5_1:15011734-15011753 | Msa0719610:intron | 35.0% | |
| ! | AATGTCATCCTTTTTCTGCT+TGG | + | chr5_1:15011787-15011806 | None:intergenic | 35.0% |
| TTGAATCTGTTAAGAAGTGG+AGG | - | chr5_1:15011805-15011824 | Msa0719610:intron | 35.0% | |
| TCAAAGCTCAAAGACTTATC+TGG | + | chr5_1:15011873-15011892 | None:intergenic | 35.0% | |
| AGATAAGTCTTTGAGCTTTG+AGG | - | chr5_1:15011872-15011891 | Msa0719610:intron | 35.0% | |
| TCGAGAGATCAAAGAAAAAG+AGG | - | chr5_1:15011907-15011926 | Msa0719610:intron | 35.0% | |
| !!! | AATGCCAAATTTGGTTTTGG+AGG | - | chr5_1:15012020-15012039 | Msa0719610:intron | 35.0% |
| GAGCAGTAAACGTAACAAAT+TGG | + | chr5_1:15012324-15012343 | None:intergenic | 35.0% | |
| ! | ACAAGACATAACAAGGTACC+AGG | + | chr5_1:15009441-15009460 | None:intergenic | 40.0% |
| TCGCACTACAAGACATAACA+AGG | + | chr5_1:15009448-15009467 | None:intergenic | 40.0% | |
| TATGTCTTGTAGTGCGACTT+TGG | - | chr5_1:15009451-15009470 | Msa0719610:three_prime_UTR | 40.0% | |
| GCGTGATTTGATCGTTGTAT+GGG | - | chr5_1:15009525-15009544 | Msa0719610:three_prime_UTR | 40.0% | |
| AATGACTCTATGTTGCGTAG+AGG | - | chr5_1:15009697-15009716 | Msa0719610:CDS | 40.0% | |
| ACGCCCAAACAATCATGTTT+AGG | - | chr5_1:15009720-15009739 | Msa0719610:CDS | 40.0% | |
| GTTTAAAGGGAGGTTTAAGG+AGG | + | chr5_1:15010263-15010282 | None:intergenic | 40.0% | |
| AGGGTTTAAAGGGAGGTTTA+AGG | + | chr5_1:15010266-15010285 | None:intergenic | 40.0% | |
| ! | GTATTATGTTTCGAGGTGCT+AGG | - | chr5_1:15010670-15010689 | Msa0719610:intron | 40.0% |
| GGTGCTAGGTTCCAATAATT+TGG | - | chr5_1:15010684-15010703 | Msa0719610:intron | 40.0% | |
| TTTCATTGATCCGAGTGTAC+TGG | - | chr5_1:15010829-15010848 | Msa0719610:intron | 40.0% | |
| AACAAGGAGACCTTGCTTAA+GGG | + | chr5_1:15010863-15010882 | None:intergenic | 40.0% | |
| ! | TCCTTGTTGATGGGAAAATG+TGG | - | chr5_1:15010875-15010894 | Msa0719610:intron | 40.0% |
| ! | ACCACATTTTCCCATCAACA+AGG | + | chr5_1:15010879-15010898 | None:intergenic | 40.0% |
| ! | TGTTGATGGGAAAATGTGGT+TGG | - | chr5_1:15010879-15010898 | Msa0719610:intron | 40.0% |
| ! | GTTGATGGGAAAATGTGGTT+GGG | - | chr5_1:15010880-15010899 | Msa0719610:intron | 40.0% |
| CTAATCTTCGTCGAAAAACC+TGG | + | chr5_1:15010933-15010952 | None:intergenic | 40.0% | |
| !! | ATGGAGGTGCCTTTGATTAA+TGG | - | chr5_1:15011270-15011289 | Msa0719610:intron | 40.0% |
| TCAGTTTCACCGTCAATCAT+TGG | + | chr5_1:15011300-15011319 | None:intergenic | 40.0% | |
| TGACGGTGAAACTGAAGATT+TGG | - | chr5_1:15011305-15011324 | Msa0719610:intron | 40.0% | |
| CTCCCCTTGATCAATATCAA+TGG | + | chr5_1:15011481-15011500 | None:intergenic | 40.0% | |
| CATTGATATTGATCAAGGGG+AGG | - | chr5_1:15011479-15011498 | Msa0719610:intron | 40.0% | |
| AGTAGATGTGAACGATGACT+TGG | - | chr5_1:15011503-15011522 | Msa0719610:intron | 40.0% | |
| ! | TGAGCTATCATTTTACACGC+AGG | - | chr5_1:15011530-15011549 | Msa0719610:intron | 40.0% |
| ! | ATCATTTTACACGCAGGCAT+TGG | - | chr5_1:15011536-15011555 | Msa0719610:intron | 40.0% |
| TTTGAGAAGCTTGAGTCGAT+GGG | - | chr5_1:15011576-15011595 | Msa0719610:intron | 40.0% | |
| ATTTCTGCGTAATAGTCAGC+AGG | + | chr5_1:15011618-15011637 | None:intergenic | 40.0% | |
| ! | TGCTGACTATTACGCAGAAA+TGG | - | chr5_1:15011617-15011636 | Msa0719610:intron | 40.0% |
| CTATTACGCAGAAATGGTGA+AGG | - | chr5_1:15011623-15011642 | Msa0719610:intron | 40.0% | |
| ! | GACTTTTCACCTTTTCCATG+TGG | + | chr5_1:15011656-15011675 | None:intergenic | 40.0% |
| ATTAGATGAGAAGCGGAAGA+TGG | - | chr5_1:15011680-15011699 | Msa0719610:intron | 40.0% | |
| ! | CAAAGACTTATCTGGAGCAT+CGG | + | chr5_1:15011865-15011884 | None:intergenic | 40.0% |
| !! | AAGTCTTTGAGCTTTGAGGA+TGG | - | chr5_1:15011876-15011895 | Msa0719610:intron | 40.0% |
| !! | AGTCTTTGAGCTTTGAGGAT+GGG | - | chr5_1:15011877-15011896 | Msa0719610:intron | 40.0% |
| AGATCAAAGAAAAAGAGGCC+CGG | - | chr5_1:15011912-15011931 | Msa0719610:intron | 40.0% | |
| GTCGTTGTTGATCCCATTGA+AGG | - | chr5_1:15009395-15009414 | Msa0719610:three_prime_UTR | 45.0% | |
| GGCGTGATTTGATCGTTGTA+TGG | - | chr5_1:15009524-15009543 | Msa0719610:three_prime_UTR | 45.0% | |
| CACTACACGTCATCAGTTGA+AGG | + | chr5_1:15009653-15009672 | None:intergenic | 45.0% | |
| AATGTCTCGTTGTCACCCTT+TGG | + | chr5_1:15009749-15009768 | None:intergenic | 45.0% | |
| ! | AGGGGTGTGTGAGCATTTAA+AGG | - | chr5_1:15010085-15010104 | Msa0719610:CDS | 45.0% |
| GGGGTGTGTGAGCATTTAAA+GGG | - | chr5_1:15010086-15010105 | Msa0719610:CDS | 45.0% | |
| GGGTGTGTGAGCATTTAAAG+GGG | - | chr5_1:15010087-15010106 | Msa0719610:CDS | 45.0% | |
| ! | GCGAAAATACATGGCGGAAA+AGG | + | chr5_1:15010361-15010380 | None:intergenic | 45.0% |
| CAACAAGGAGACCTTGCTTA+AGG | + | chr5_1:15010864-15010883 | None:intergenic | 45.0% | |
| AAGCAAGGTCTCCTTGTTGA+TGG | - | chr5_1:15010865-15010884 | Msa0719610:intron | 45.0% | |
| AGCAAGGTCTCCTTGTTGAT+GGG | - | chr5_1:15010866-15010885 | Msa0719610:intron | 45.0% | |
| ATGGGAAAATGTGGTTGGGA+GGG | - | chr5_1:15010884-15010903 | Msa0719610:intron | 45.0% | |
| ! | AGATTAGTCATGGGCAATGC+CGG | - | chr5_1:15010946-15010965 | Msa0719610:intron | 45.0% |
| TTGAAGGGACTAATCTCCAC+CGG | + | chr5_1:15010968-15010987 | None:intergenic | 45.0% | |
| TGTGCTCTGTATCCACACAA+TGG | - | chr5_1:15011041-15011060 | Msa0719610:intron | 45.0% | |
| ACAGCTAGTAGGTGGAGAAA+AGG | + | chr5_1:15011110-15011129 | None:intergenic | 45.0% | |
| ! | TTTTCTCCACCTACTAGCTG+TGG | - | chr5_1:15011109-15011128 | Msa0719610:intron | 45.0% |
| AAGATTCCACAGCTAGTAGG+TGG | + | chr5_1:15011118-15011137 | None:intergenic | 45.0% | |
| GAGAAGATTCCACAGCTAGT+AGG | + | chr5_1:15011121-15011140 | None:intergenic | 45.0% | |
| TGCTTCCAATCCACATTCTC+AGG | + | chr5_1:15011450-15011469 | None:intergenic | 45.0% | |
| !!! | ATTTTACACGCAGGCATTGG+AGG | - | chr5_1:15011539-15011558 | Msa0719610:intron | 45.0% |
| !!! | TTTTACACGCAGGCATTGGA+GGG | - | chr5_1:15011540-15011559 | Msa0719610:intron | 45.0% |
| !! | CATCGACTCAAGCTTCTCAA+AGG | + | chr5_1:15011577-15011596 | None:intergenic | 45.0% |
| ! | CTTTGAGAAGCTTGAGTCGA+TGG | - | chr5_1:15011575-15011594 | Msa0719610:intron | 45.0% |
| AGTCAGCAGGTCTCAAGAAA+GGG | + | chr5_1:15011605-15011624 | None:intergenic | 45.0% | |
| TAGTCAGCAGGTCTCAAGAA+AGG | + | chr5_1:15011606-15011625 | None:intergenic | 45.0% | |
| GTCGGCTATTAGATGAGAAG+CGG | - | chr5_1:15011673-15011692 | Msa0719610:intron | 45.0% | |
| TGAAGAGAGAAGAAAGGCCA+GGG | - | chr5_1:15011710-15011729 | Msa0719610:intron | 45.0% | |
| AGACAATCTCTTTGCTTCCC+TGG | + | chr5_1:15011730-15011749 | None:intergenic | 45.0% | |
| AGAAAGGGCCAAGCAGAAAA+AGG | - | chr5_1:15011776-15011795 | Msa0719610:intron | 45.0% | |
| AGGTAAGGCAAAGCAAGCTA+TGG | - | chr5_1:15011959-15011978 | Msa0719610:intron | 45.0% | |
| GGTAAGGCAAAGCAAGCTAT+GGG | - | chr5_1:15011960-15011979 | Msa0719610:intron | 45.0% | |
| GCAAAGCAAGCTATGGGAAA+GGG | - | chr5_1:15011966-15011985 | Msa0719610:intron | 45.0% | |
| !!! | CCAAATTTGGTTTTGGAGGC+CGG | - | chr5_1:15012024-15012043 | Msa0719610:intron | 45.0% |
| !!! | TGATTTTGGCGGGTTCAGTA+AGG | - | chr5_1:15012085-15012104 | Msa0719610:intron | 45.0% |
| !!! | GATTTTGGCGGGTTCAGTAA+GGG | - | chr5_1:15012086-15012105 | Msa0719610:intron | 45.0% |
| ! | TTTCTCACAAAGGCGTGTCA+TGG | - | chr5_1:15012160-15012179 | Msa0719610:intron | 45.0% |
| TGTCTCTACTAACACAGGCT+TGG | + | chr5_1:15012381-15012400 | None:intergenic | 45.0% | |
| GCTGGAACAGACAACGTTTG+TGG | + | chr5_1:15010236-15010255 | None:intergenic | 50.0% | |
| GGATCTGAGTCCAGTACACT+CGG | + | chr5_1:15010842-15010861 | None:intergenic | 50.0% | |
| GGACTCAGATCCCTTAAGCA+AGG | - | chr5_1:15010850-15010869 | Msa0719610:intron | 50.0% | |
| GATGGGAAAATGTGGTTGGG+AGG | - | chr5_1:15010883-15010902 | Msa0719610:intron | 50.0% | |
| TGGGAAAATGTGGTTGGGAG+GGG | - | chr5_1:15010885-15010904 | Msa0719610:intron | 50.0% | |
| ! | TCCACTATAGGTGGTTAGCC+AGG | - | chr5_1:15010912-15010931 | Msa0719610:intron | 50.0% |
| ACCTGGCTAACCACCTATAG+TGG | + | chr5_1:15010916-15010935 | None:intergenic | 50.0% | |
| ! | CATAAGCTGGCCTGAGAATG+TGG | - | chr5_1:15011437-15011456 | Msa0719610:intron | 50.0% |
| GGGAGATAGCCACATGGAAA+AGG | - | chr5_1:15011644-15011663 | Msa0719610:intron | 50.0% | |
| AGATGAGAAGCGGAAGATGG+AGG | - | chr5_1:15011683-15011702 | Msa0719610:intron | 50.0% | |
| GGAGGCTGAAGAGAGAAGAA+AGG | - | chr5_1:15011704-15011723 | Msa0719610:intron | 50.0% | |
| CTGAAGAGAGAAGAAAGGCC+AGG | - | chr5_1:15011709-15011728 | Msa0719610:intron | 50.0% | |
| AGGAAGCAGAGACAACAGAG+TGG | - | chr5_1:15011825-15011844 | Msa0719610:intron | 50.0% | |
| GGAAGCAGAGACAACAGAGT+GGG | - | chr5_1:15011826-15011845 | Msa0719610:intron | 50.0% | |
| !! | CAACAGAGTGGGTTTGCTGA+CGG | - | chr5_1:15011837-15011856 | Msa0719610:intron | 50.0% |
| GGCAAAGCAAGCTATGGGAA+AGG | - | chr5_1:15011965-15011984 | Msa0719610:intron | 50.0% | |
| CCGGCCTCCAAAACCAAATT+TGG | + | chr5_1:15012027-15012046 | None:intergenic | 50.0% | |
| !!! | ATTTGGTTTTGGAGGCCGGA+AGG | - | chr5_1:15012028-15012047 | Msa0719610:intron | 50.0% |
| !!! | TTTGGTTTTGGAGGCCGGAA+GGG | - | chr5_1:15012029-15012048 | Msa0719610:intron | 50.0% |
| TCTGCTTCTTCGATCCCTTC+CGG | + | chr5_1:15012046-15012065 | None:intergenic | 50.0% | |
| TTCAGTAAGGGTTCTGCTGC+TGG | - | chr5_1:15012098-15012117 | Msa0719610:intron | 50.0% | |
| ! | CAAAGGCGTGTCATGGAATG+CGG | - | chr5_1:15012167-15012186 | Msa0719610:intron | 50.0% |
| AATGCGGCTATGGCACAATC+TGG | - | chr5_1:15012183-15012202 | Msa0719610:intron | 50.0% | |
| GAGGTTTAAGGAGGCAGAGC+TGG | + | chr5_1:15010254-15010273 | None:intergenic | 55.0% | |
| GGACTCACCGTGTTCTACGT+TGG | + | chr5_1:15010320-15010339 | None:intergenic | 55.0% | |
| AGGGGACAGTCCACTATAGG+TGG | - | chr5_1:15010903-15010922 | Msa0719610:intron | 55.0% | |
| TTAGTCATGGGCAATGCCGG+TGG | - | chr5_1:15010949-15010968 | Msa0719610:intron | 55.0% | |
| ! | GCTGGCCTGAGAATGTGGAT+TGG | - | chr5_1:15011442-15011461 | Msa0719610:intron | 55.0% |
| ! | GGCATTGGAGGGAACTAGAC+AGG | - | chr5_1:15011551-15011570 | Msa0719610:intron | 55.0% |
| GGTGAAGGGAGATAGCCACA+TGG | - | chr5_1:15011638-15011657 | Msa0719610:intron | 55.0% | |
| TGAGAAGCGGAAGATGGAGG+AGG | - | chr5_1:15011686-15011705 | Msa0719610:intron | 55.0% | |
| CGATCTCCTGGAGATACTCC+GGG | + | chr5_1:15011933-15011952 | None:intergenic | 55.0% | |
| CCGATCTCCTGGAGATACTC+CGG | + | chr5_1:15011934-15011953 | None:intergenic | 55.0% | |
| ! | CCGGAGTATCTCCAGGAGAT+CGG | - | chr5_1:15011931-15011950 | Msa0719610:intron | 55.0% |
| GTATCTCCAGGAGATCGGTC+AGG | - | chr5_1:15011936-15011955 | Msa0719610:intron | 55.0% | |
| TTACCTCCTGACCGATCTCC+TGG | + | chr5_1:15011945-15011964 | None:intergenic | 55.0% | |
| AGGAGATCGGTCAGGAGGTA+AGG | - | chr5_1:15011944-15011963 | Msa0719610:intron | 55.0% | |
| CGTGTCATGGAATGCGGCTA+TGG | - | chr5_1:15012173-15012192 | Msa0719610:intron | 55.0% | |
| GGGAGGGGACAGTCCACTAT+AGG | - | chr5_1:15010900-15010919 | Msa0719610:intron | 60.0% | |
| ! | AAGAGGCCCGGAGTATCTCC+AGG | - | chr5_1:15011924-15011943 | Msa0719610:intron | 60.0% |
| TCTCCAGGAGATCGGTCAGG+AGG | - | chr5_1:15011939-15011958 | Msa0719610:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 15009347 | 15012402 | 15009347 | ID=Msa0719610;Name=Msa0719610 |
| chr5_1 | mRNA | 15009347 | 15012402 | 15009347 | ID=Msa0719610-mRNA-1;Parent=Msa0719610;Name=Msa0719610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0.5|0.5|1|1|2|260|315 |
| chr5_1 | exon | 15009347 | 15010484 | 15009347 | ID=Msa0719610-mRNA-1:exon:5842;Parent=Msa0719610-mRNA-1 |
| chr5_1 | exon | 15012333 | 15012402 | 15012333 | ID=Msa0719610-mRNA-1:exon:5841;Parent=Msa0719610-mRNA-1 |
| chr5_1 | CDS | 15012333 | 15012402 | 15012333 | ID=Msa0719610-mRNA-1:cds;Parent=Msa0719610-mRNA-1 |
| chr5_1 | CDS | 15009607 | 15010484 | 15009607 | ID=Msa0719610-mRNA-1:cds;Parent=Msa0719610-mRNA-1 |
| chr5_1 | three_prime_UTR | 15009347 | 15009606 | 15009347 | ID=Msa0719610-mRNA-1:three_prime_utr;Parent=Msa0719610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
