Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0958220 | sp|Q8GYY0|1A112_ARATH | 60.279 | 501 | 189 | 3 | 31 | 527 | 1 | 495 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0958220 | A0A072UBT9 | 96.629 | 534 | 11 | 4 | 1 | 529 | 1 | 532 | 0.0 | 1049 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0958220 | 0.808285 | 3.337966e-50 | -8.615850e-47 |
| Msa0079320 | Msa0958220 | 0.813020 | 3.162159e-51 | -8.615850e-47 |
| Msa0091300 | Msa0958220 | 0.801812 | 7.546703e-49 | -8.615850e-47 |
| Msa0099090 | Msa0958220 | 0.836517 | 8.931867e-57 | -8.615850e-47 |
| Msa0617470 | Msa0958220 | 0.800431 | 1.445614e-48 | -8.615850e-47 |
| Msa0700250 | Msa0958220 | 0.802328 | 5.909907e-49 | -8.615850e-47 |
| Msa0159240 | Msa0958220 | 0.806365 | 8.523428e-50 | -8.615850e-47 |
| Msa0169330 | Msa0958220 | 0.800130 | 1.664628e-48 | -8.615850e-47 |
| Msa0172110 | Msa0958220 | 0.800545 | 1.370739e-48 | -8.615850e-47 |
| Msa0186400 | Msa0958220 | 0.809727 | 1.640511e-50 | -8.615850e-47 |
| Msa0194750 | Msa0958220 | 0.805531 | 1.276241e-49 | -8.615850e-47 |
| Msa0385850 | Msa0958220 | 0.802416 | 5.667892e-49 | -8.615850e-47 |
| Msa0483090 | Msa0958220 | 0.802542 | 5.339050e-49 | -8.615850e-47 |
| Msa0523420 | Msa0958220 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa0526490 | Msa0958220 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0548160 | Msa0958220 | 0.803782 | 2.958267e-49 | -8.615850e-47 |
| Msa0602320 | Msa0958220 | 0.805156 | 1.529591e-49 | -8.615850e-47 |
| Msa0919790 | Msa0958220 | 0.803260 | 3.794434e-49 | -8.615850e-47 |
| Msa0958220 | Msa1093190 | 0.805960 | 1.037010e-49 | -8.615850e-47 |
| Msa0958220 | Msa1147600 | 0.816184 | 6.303269e-52 | -8.615850e-47 |
| Msa0958220 | Msa1320660 | 0.806342 | 8.617723e-50 | -8.615850e-47 |
| Msa0958220 | Msa1392570 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
| Msa0958220 | Msa1442020 | 0.803054 | 4.186812e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0958220 | MtrunA17_Chr6g0475681 | 96.629 | 534 | 11 | 4 | 1 | 529 | 1 | 532 | 0.0 | 1049 |
| Msa0958220 | MtrunA17_Chr5g0398431 | 53.521 | 497 | 225 | 4 | 31 | 524 | 1 | 494 | 0.0 | 554 |
| Msa0958220 | MtrunA17_Chr4g0054371 | 45.327 | 428 | 219 | 6 | 116 | 529 | 16 | 442 | 6.95e-142 | 417 |
| Msa0958220 | MtrunA17_Chr6g0488041 | 44.471 | 425 | 230 | 3 | 102 | 522 | 12 | 434 | 8.14e-142 | 416 |
| Msa0958220 | MtrunA17_Chr8g0389311 | 44.340 | 424 | 224 | 4 | 100 | 519 | 8 | 423 | 9.59e-139 | 408 |
| Msa0958220 | MtrunA17_Chr8g0389321 | 44.340 | 424 | 224 | 4 | 100 | 519 | 8 | 423 | 9.59e-139 | 408 |
| Msa0958220 | MtrunA17_Chr3g0135251 | 44.988 | 429 | 227 | 3 | 104 | 524 | 2 | 429 | 1.65e-137 | 406 |
| Msa0958220 | MtrunA17_Chr5g0400831 | 44.153 | 419 | 221 | 6 | 116 | 522 | 16 | 433 | 1.15e-136 | 404 |
| Msa0958220 | MtrunA17_Chr8g0387481 | 41.647 | 425 | 241 | 3 | 104 | 522 | 12 | 435 | 7.58e-131 | 389 |
| Msa0958220 | MtrunA17_Chr8g0348351 | 41.531 | 431 | 248 | 2 | 95 | 522 | 2 | 431 | 4.62e-128 | 382 |
| Msa0958220 | MtrunA17_Chr7g0248681 | 41.135 | 423 | 244 | 3 | 104 | 522 | 11 | 432 | 5.81e-124 | 372 |
| Msa0958220 | MtrunA17_Chr5g0412871 | 24.611 | 386 | 238 | 13 | 173 | 520 | 93 | 463 | 1.21e-20 | 95.1 |
| Msa0958220 | MtrunA17_Chr8g0345201 | 20.994 | 362 | 256 | 13 | 183 | 518 | 154 | 511 | 1.11e-12 | 70.5 |
| Msa0958220 | MtrunA17_Chr8g0382671 | 21.726 | 336 | 239 | 10 | 166 | 490 | 115 | 437 | 3.86e-12 | 68.6 |
| Msa0958220 | MtrunA17_Chr2g0324801 | 25.448 | 279 | 165 | 9 | 183 | 439 | 46 | 303 | 9.58e-12 | 67.0 |
| Msa0958220 | MtrunA17_Chr7g0267911 | 20.541 | 370 | 263 | 12 | 166 | 522 | 113 | 464 | 3.57e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0958220 | AT5G51690.1 | 60.279 | 501 | 189 | 3 | 31 | 527 | 1 | 495 | 0.0 | 636 |
| Msa0958220 | AT1G62960.1 | 52.799 | 536 | 211 | 8 | 29 | 529 | 29 | 557 | 0.0 | 558 |
| Msa0958220 | AT5G51690.2 | 61.081 | 370 | 141 | 1 | 161 | 527 | 3 | 372 | 6.04e-174 | 495 |
| Msa0958220 | AT4G37770.1 | 46.838 | 427 | 219 | 3 | 104 | 523 | 4 | 429 | 2.94e-144 | 423 |
| Msa0958220 | AT2G22810.1 | 45.057 | 435 | 230 | 4 | 102 | 528 | 2 | 435 | 5.27e-141 | 415 |
| Msa0958220 | AT3G49700.1 | 46.065 | 432 | 225 | 3 | 103 | 527 | 3 | 433 | 1.44e-139 | 411 |
| Msa0958220 | AT5G65800.1 | 44.952 | 416 | 221 | 3 | 116 | 524 | 16 | 430 | 1.03e-135 | 402 |
| Msa0958220 | AT4G26200.1 | 43.902 | 451 | 233 | 6 | 81 | 523 | 4 | 442 | 3.22e-135 | 399 |
| Msa0958220 | AT4G08040.1 | 44.068 | 413 | 226 | 3 | 116 | 524 | 14 | 425 | 8.83e-134 | 396 |
| Msa0958220 | AT4G11280.1 | 42.619 | 420 | 236 | 3 | 104 | 519 | 15 | 433 | 1.77e-130 | 389 |
| Msa0958220 | AT1G01480.1 | 41.299 | 431 | 245 | 4 | 104 | 527 | 12 | 441 | 1.02e-124 | 374 |
| Msa0958220 | AT3G61510.1 | 39.352 | 432 | 254 | 4 | 95 | 522 | 2 | 429 | 4.60e-122 | 367 |
| Msa0958220 | AT1G01480.2 | 41.194 | 335 | 190 | 3 | 200 | 527 | 1 | 335 | 3.05e-96 | 298 |
| Msa0958220 | AT1G70580.4 | 25.995 | 377 | 244 | 15 | 173 | 520 | 93 | 463 | 3.85e-21 | 97.1 |
| Msa0958220 | AT1G70580.2 | 25.995 | 377 | 244 | 15 | 173 | 520 | 93 | 463 | 3.85e-21 | 97.1 |
| Msa0958220 | AT1G70580.3 | 25.995 | 377 | 244 | 15 | 173 | 520 | 93 | 463 | 3.85e-21 | 97.1 |
| Msa0958220 | AT1G70580.1 | 25.995 | 377 | 244 | 15 | 173 | 520 | 93 | 463 | 3.85e-21 | 97.1 |
| Msa0958220 | AT1G23310.1 | 25.199 | 377 | 247 | 14 | 173 | 520 | 93 | 463 | 4.37e-21 | 96.7 |
| Msa0958220 | AT1G23310.2 | 24.855 | 346 | 227 | 12 | 173 | 490 | 93 | 433 | 1.51e-19 | 91.7 |
| Msa0958220 | AT1G72330.1 | 22.000 | 350 | 225 | 13 | 211 | 524 | 196 | 533 | 1.35e-16 | 83.2 |
| Msa0958220 | AT1G17290.1 | 21.693 | 378 | 246 | 13 | 183 | 524 | 173 | 536 | 9.33e-16 | 80.5 |
| Msa0958220 | AT1G72330.2 | 28.402 | 169 | 105 | 6 | 211 | 374 | 196 | 353 | 1.01e-15 | 79.7 |
| Msa0958220 | AT1G72330.3 | 21.488 | 363 | 224 | 13 | 211 | 524 | 196 | 546 | 3.81e-15 | 78.6 |
| Msa0958220 | AT5G36160.1 | 27.941 | 204 | 116 | 6 | 183 | 376 | 80 | 262 | 7.29e-13 | 70.9 |
| Msa0958220 | AT2G22250.3 | 21.579 | 380 | 257 | 13 | 167 | 528 | 116 | 472 | 1.50e-12 | 70.1 |
| Msa0958220 | AT2G22250.2 | 21.579 | 380 | 257 | 13 | 167 | 528 | 116 | 472 | 1.50e-12 | 70.1 |
| Msa0958220 | AT2G22250.1 | 21.579 | 380 | 257 | 13 | 167 | 528 | 69 | 425 | 1.59e-12 | 70.1 |
Find 133 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAGGACGACGTCGTTTA+AGG | 0.204925 | 6_3:-71795720 | None:intergenic |
| GATATCAATTTGAGTATAAA+TGG | 0.236641 | 6_3:+71797582 | Msa0958220:CDS |
| AGAAGACTGAAAAGCATTTC+TGG | 0.240255 | 6_3:-71800581 | None:intergenic |
| AGAAAGGAGAACTTGAATTA+TGG | 0.243969 | 6_3:+71801059 | Msa0958220:CDS |
| AGAAAGTAGAAGAGTGATAA+AGG | 0.247026 | 6_3:-71795688 | None:intergenic |
| TTCACACAACAAAACTGTTT+TGG | 0.255365 | 6_3:+71800796 | Msa0958220:CDS |
| TCAAAAGACCTTTCGATTGC+TGG | 0.288659 | 6_3:+71800752 | Msa0958220:CDS |
| AGCACACTTGATTCCTAGTT+TGG | 0.291076 | 6_3:-71800975 | None:intergenic |
| TTGTGTGGTGCAGTTGAGTT+TGG | 0.314151 | 6_3:+71797503 | Msa0958220:intron |
| TTCCGATAAACGATTCATTC+AGG | 0.315188 | 6_3:+71800889 | Msa0958220:CDS |
| AAGAAGAAGGTGGTTGAGAT+TGG | 0.316071 | 6_3:-71795570 | None:intergenic |
| GTCGATTACCCTGGATAATA+AGG | 0.320746 | 6_3:-71800125 | None:intergenic |
| AGAATTTGACCCGTCAAATA+TGG | 0.338798 | 6_3:+71800019 | Msa0958220:CDS |
| CCTCTTCAAGCCGTAGTTCA+AGG | 0.345242 | 6_3:+71795634 | Msa0958220:CDS |
| GCGCCTTATCAATCATTTCA+TGG | 0.351831 | 6_3:+71797609 | Msa0958220:CDS |
| TCCAGGAGTTATGTTTATCT+TGG | 0.353666 | 6_3:-71801101 | None:intergenic |
| TTCCTGAATGAATCGTTTAT+CGG | 0.368687 | 6_3:-71800891 | None:intergenic |
| GAAAGGAGAACTTGAATTAT+GGG | 0.372458 | 6_3:+71801060 | Msa0958220:CDS |
| AACGATAGTATCTCAATTGC+AGG | 0.378929 | 6_3:-71800062 | None:intergenic |
| GAAAGTAGAAGAGTGATAAA+GGG | 0.384830 | 6_3:-71795687 | None:intergenic |
| AGTTCTCCTTTCTCGCTATA+AGG | 0.388101 | 6_3:-71801049 | None:intergenic |
| AAAACAAACACACACTCATT+TGG | 0.390361 | 6_3:+71795367 | None:intergenic |
| AAATCCCTCTAGTTATTGAT+AGG | 0.392176 | 6_3:+71801188 | Msa0958220:CDS |
| AGAAGAAGGTGGTTGAGATT+GGG | 0.407137 | 6_3:-71795569 | None:intergenic |
| CTCTAGTTATTGATAGGATT+CGG | 0.409149 | 6_3:+71801194 | Msa0958220:CDS |
| GCACCCGTCTTATTCTATTT+CGG | 0.410492 | 6_3:-71800928 | None:intergenic |
| CATGTTAAGTTTAATCCTCA+TGG | 0.411093 | 6_3:+71795922 | Msa0958220:CDS |
| CTTGACTAAATGCTTGTTCA+AGG | 0.411999 | 6_3:-71800484 | None:intergenic |
| GTCCCTACACCTTATTATCC+AGG | 0.416731 | 6_3:+71800116 | Msa0958220:CDS |
| AGGAAAGGAGGAGAAGAAGA+AGG | 0.421695 | 6_3:-71795434 | None:intergenic |
| ATTGCTGACGAAGTATTTGC+AGG | 0.422387 | 6_3:+71800635 | Msa0958220:CDS |
| GGAAGAAGCGTAGGAGAAGA+AGG | 0.426362 | 6_3:-71795760 | None:intergenic |
| GATGATTCTCTTTATTATGT+TGG | 0.428695 | 6_3:+71795871 | Msa0958220:CDS |
| AGGAACGATGAGTTTCATTC+CGG | 0.428810 | 6_3:-71795614 | None:intergenic |
| ATCAGACCTTATAGCGAGAA+AGG | 0.438192 | 6_3:+71801043 | Msa0958220:CDS |
| AATGAGTGAGTGAGAGAGAA+AGG | 0.448306 | 6_3:-71795464 | None:intergenic |
| TCATCCTCTCCCTCTCGAAC+CGG | 0.457560 | 6_3:+71795595 | Msa0958220:CDS |
| TTGGGTTTGGTTCATTGACC+CGG | 0.458544 | 6_3:-71795521 | None:intergenic |
| CAGCGCCGGTATGTTCTGTT+GGG | 0.459303 | 6_3:+71801003 | Msa0958220:CDS |
| AATCCATGAAATGATTGATA+AGG | 0.464480 | 6_3:-71797612 | None:intergenic |
| ATGCAATGGCAAGCCGATCC+AGG | 0.473529 | 6_3:-71801118 | None:intergenic |
| ACGGGTGCACGATGAGTTTG+TGG | 0.475034 | 6_3:+71800943 | Msa0958220:CDS |
| GAACTTGGAGGGATCAATGA+TGG | 0.475995 | 6_3:+71797551 | Msa0958220:CDS |
| CCGTCTTATTCTATTTCGGT+TGG | 0.485045 | 6_3:-71800924 | None:intergenic |
| GGTGTCAGAATATTGCCAAC+AGG | 0.485404 | 6_3:-71800560 | None:intergenic |
| GGATTAAACTTAACATGATA+AGG | 0.486687 | 6_3:-71795916 | None:intergenic |
| GATTGGTATGGTGTGGTTGA+AGG | 0.487037 | 6_3:-71795488 | None:intergenic |
| TCAGTACTTCGACAGTGAAC+AGG | 0.488659 | 6_3:-71800437 | None:intergenic |
| ATATTGCCAACAGGATTTGA+AGG | 0.489937 | 6_3:-71800551 | None:intergenic |
| GTATTGTTATTATTATTCTC+AGG | 0.491598 | 6_3:-71795736 | None:intergenic |
| CATTCCGGTTCGAGAGGGAG+AGG | 0.492695 | 6_3:-71795599 | None:intergenic |
| GCCAAGATAAACATAACTCC+TGG | 0.492908 | 6_3:+71801100 | Msa0958220:CDS |
| GGAAAGGAGGAGAAGAAGAA+GGG | 0.495338 | 6_3:-71795433 | None:intergenic |
| AAAGGAAAGGAAAGGAAAGG+AGG | 0.496057 | 6_3:-71795446 | None:intergenic |
| ACCGTTACGACCTTGAACTA+CGG | 0.501531 | 6_3:-71795644 | None:intergenic |
| AACAAGTGTGATGGTGATGA+TGG | 0.502662 | 6_3:-71795403 | None:intergenic |
| GAGAAAGGAAAGGAAAGGAA+AGG | 0.506794 | 6_3:-71795449 | None:intergenic |
| AAGAAGCGTAGGAGAAGAAG+GGG | 0.509079 | 6_3:-71795758 | None:intergenic |
| AGGGACGTAAGATGGCGTCC+AGG | 0.510730 | 6_3:+71800401 | Msa0958220:intron |
| GATGTTAGTACCATATTTGA+CGG | 0.511266 | 6_3:-71800029 | None:intergenic |
| GAAGAACGAGGAAGAAGCGT+AGG | 0.511504 | 6_3:-71795769 | None:intergenic |
| TCAAATATGGTACTAACATC+GGG | 0.513697 | 6_3:+71800032 | Msa0958220:CDS |
| ATTGGTATGGTGTGGTTGAA+GGG | 0.514418 | 6_3:-71795487 | None:intergenic |
| ATGTTAAGTTTAATCCTCAT+GGG | 0.515359 | 6_3:+71795923 | Msa0958220:CDS |
| GTTTGGATTTGATTGAGAAA+TGG | 0.516654 | 6_3:+71797520 | Msa0958220:CDS |
| GAAATGGTTGGTGAAGAACT+TGG | 0.517138 | 6_3:+71797536 | Msa0958220:CDS |
| AACTTGGAGGGATCAATGAT+GGG | 0.518854 | 6_3:+71797552 | Msa0958220:CDS |
| TGAGATACTATCGTTCTGCT+TGG | 0.519831 | 6_3:+71800070 | Msa0958220:CDS |
| CCTCATGGGATTATTCAGCT+TGG | 0.520803 | 6_3:+71795937 | Msa0958220:CDS |
| CGTTCGAATTTATCCTCTCG+TGG | 0.523500 | 6_3:+71795796 | Msa0958220:CDS |
| GTGGATTGTTTAACCAAACT+AGG | 0.523731 | 6_3:+71800962 | Msa0958220:CDS |
| GTATTTGCAGGCTCCACGTA+CGG | 0.524369 | 6_3:+71800647 | Msa0958220:CDS |
| GGAGAGGATGAAGAAGAAGA+AGG | 0.538233 | 6_3:-71795583 | None:intergenic |
| GCTTTGACAGGGACGTAAGA+TGG | 0.539978 | 6_3:+71800393 | Msa0958220:intron |
| TCGATTGCTGGATTTAGAGT+CGG | 0.540691 | 6_3:+71800764 | Msa0958220:CDS |
| TTTAGTGGATTGGTATGGTG+TGG | 0.546076 | 6_3:-71795495 | None:intergenic |
| ACCATCCTGGTTCTATGCAA+TGG | 0.546338 | 6_3:-71801132 | None:intergenic |
| GCTTGGTTTGTCTGATAACA+AGG | 0.548963 | 6_3:+71795954 | Msa0958220:CDS |
| GATAATAAGGTGTAGGGACA+AGG | 0.549163 | 6_3:-71800112 | None:intergenic |
| TGAGAGAGAAAGGAAAGGAA+AGG | 0.553080 | 6_3:-71795454 | None:intergenic |
| CTCTAAATCCAGCAATCGAA+AGG | 0.554066 | 6_3:-71800760 | None:intergenic |
| GAGTTTCATTCCGGTTCGAG+AGG | 0.556125 | 6_3:-71795605 | None:intergenic |
| TATTGCCAACAGGATTTGAA+GGG | 0.556392 | 6_3:-71800550 | None:intergenic |
| TGGGTTTGGTTCATTGACCC+GGG | 0.556997 | 6_3:-71795520 | None:intergenic |
| GAAGAAGCGTAGGAGAAGAA+GGG | 0.557441 | 6_3:-71795759 | None:intergenic |
| AAGGAGGAGAAGAAGAAGGG+AGG | 0.559626 | 6_3:-71795430 | None:intergenic |
| GTCAAATATGGTACTAACAT+CGG | 0.563753 | 6_3:+71800031 | Msa0958220:CDS |
| ACAGGTATTAAGTCTATCCC+TGG | 0.566102 | 6_3:-71800419 | None:intergenic |
| TCCCTACACCTTATTATCCA+GGG | 0.567075 | 6_3:+71800117 | Msa0958220:CDS |
| GGATTTGATTGAGAAATGGT+TGG | 0.569337 | 6_3:+71797524 | Msa0958220:CDS |
| AGTGTGATGGTGATGATGGA+TGG | 0.569574 | 6_3:-71795399 | None:intergenic |
| AAGTGTGCTAAGAGCAGCGC+CGG | 0.573828 | 6_3:+71800989 | Msa0958220:CDS |
| GAAGTAACTAACCTCTGTGT+TGG | 0.575820 | 6_3:-71800860 | None:intergenic |
| GCCATTGCATAGAACCAGGA+TGG | 0.576139 | 6_3:+71801131 | Msa0958220:CDS |
| ATATTCTGAATCGAGAACTT+CGG | 0.576552 | 6_3:-71800693 | None:intergenic |
| TTCTGTTGGGCTGATATGAG+TGG | 0.577234 | 6_3:+71801016 | Msa0958220:CDS |
| ATGTTAGTACCATATTTGAC+GGG | 0.579929 | 6_3:-71800028 | None:intergenic |
| AAACTCCTCGCTTCCGTACG+TGG | 0.582162 | 6_3:-71800660 | None:intergenic |
| ATGGTTGGTGAAGAACTTGG+AGG | 0.582724 | 6_3:+71797539 | Msa0958220:CDS |
| ACCCTGGATAATAAGGTGTA+GGG | 0.583042 | 6_3:-71800118 | None:intergenic |
| CGAATCCTATCAATAACTAG+AGG | 0.584201 | 6_3:-71801193 | None:intergenic |
| TCGTTCTGCTTGGCAGACCA+TGG | 0.585867 | 6_3:+71800080 | Msa0958220:CDS |
| AGCCGCGTTCATATAGTGTA+CGG | 0.586505 | 6_3:+71800725 | Msa0958220:CDS |
| AAACGAGGAGTCAAAGTTCG+CGG | 0.587306 | 6_3:+71800512 | Msa0958220:CDS |
| TACCCTGGATAATAAGGTGT+AGG | 0.592046 | 6_3:-71800119 | None:intergenic |
| CAACCGAAATAGAATAAGAC+GGG | 0.592241 | 6_3:+71800925 | Msa0958220:CDS |
| GTGAGTGAGAGAGAAAGGAA+AGG | 0.595183 | 6_3:-71795459 | None:intergenic |
| AAACAAATACGAAACCATCC+TGG | 0.595378 | 6_3:-71801145 | None:intergenic |
| GAGGATGAAGAAGAAGAAGG+TGG | 0.595831 | 6_3:-71795580 | None:intergenic |
| GGGACGTAAGATGGCGTCCA+GGG | 0.596829 | 6_3:+71800402 | Msa0958220:intron |
| TTGACTAAATGCTTGTTCAA+GGG | 0.597175 | 6_3:-71800483 | None:intergenic |
| GATAAACATAACTCCTGGAT+CGG | 0.599407 | 6_3:+71801105 | Msa0958220:CDS |
| TCGAACCCTTCAAATCCTGT+TGG | 0.599882 | 6_3:+71800545 | Msa0958220:CDS |
| GGACAAGGAATGCATTTCCA+TGG | 0.601989 | 6_3:-71800097 | None:intergenic |
| GGAGGAAGAAACAAGTGTGA+TGG | 0.605618 | 6_3:-71795412 | None:intergenic |
| AGTTTCATTCCGGTTCGAGA+GGG | 0.606450 | 6_3:-71795604 | None:intergenic |
| GCTTGCCATTGCATAGAACC+AGG | 0.608825 | 6_3:+71801127 | Msa0958220:CDS |
| GCCGTAGTTCAAGGTCGTAA+CGG | 0.611520 | 6_3:+71795643 | Msa0958220:CDS |
| TTTATGCATCAGGTTATGGG+AGG | 0.621158 | 6_3:+71799990 | Msa0958220:CDS |
| AGGCTCCACGTACGGAAGCG+AGG | 0.623216 | 6_3:+71800655 | Msa0958220:CDS |
| CCTTGAACTACGGCTTGAAG+AGG | 0.628674 | 6_3:-71795634 | None:intergenic |
| CCAACCGAAATAGAATAAGA+CGG | 0.633080 | 6_3:+71800924 | Msa0958220:CDS |
| TGGTTGGTGAAGAACTTGGA+GGG | 0.633885 | 6_3:+71797540 | Msa0958220:CDS |
| ATCAGCCCAACAGAACATAC+CGG | 0.634233 | 6_3:-71801008 | None:intergenic |
| GAATCCTATCAATAACTAGA+GGG | 0.646614 | 6_3:-71801192 | None:intergenic |
| TTTAGTCAAGCAAGAAAACG+AGG | 0.661177 | 6_3:+71800497 | Msa0958220:CDS |
| ACTTGGAGGGATCAATGATG+GGG | 0.673771 | 6_3:+71797553 | Msa0958220:CDS |
| ATAAAGGGATTAAACTACCG+AGG | 0.687862 | 6_3:-71795672 | None:intergenic |
| CCAAGCTGAATAATCCCATG+AGG | 0.701633 | 6_3:-71795937 | None:intergenic |
| ACTCGAAATAGAGCCACGAG+AGG | 0.726731 | 6_3:-71795809 | None:intergenic |
| GGCCGTACACTATATGAACG+CGG | 0.742883 | 6_3:-71800727 | None:intergenic |
| TTCGAACGAGAAGAAGAACG+AGG | 0.751950 | 6_3:-71795781 | None:intergenic |
| CTATATCTGCACCAACACAG+AGG | 0.756871 | 6_3:+71800849 | Msa0958220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTTTAAAAAAATGT+TGG | + | chr6_3:71796059-71796078 | Msa0958220:intron | 10.0% |
| !!! | TTTTTGTTTTGTTTTAATTT+TGG | + | chr6_3:71797470-71797489 | Msa0958220:intron | 10.0% |
| !!! | TTTTGTTTTGTTTTAATTTT+GGG | + | chr6_3:71797471-71797490 | Msa0958220:intron | 10.0% |
| !!! | TTTAAGATGAATAATTTTAT+AGG | + | chr6_3:71798886-71798905 | Msa0958220:intron | 10.0% |
| !! | AAGATAAGTTTATATTTAAA+TGG | + | chr6_3:71799629-71799648 | Msa0958220:intron | 10.0% |
| !! | ATGTATAAAAACTATTTATA+AGG | + | chr6_3:71800279-71800298 | Msa0958220:intron | 10.0% |
| !!! | TGTTTTTTAATGATTGTTTT+CGG | + | chr6_3:71796015-71796034 | Msa0958220:intron | 15.0% |
| !!! | AAAAACACTTTGAAATATTT+TGG | - | chr6_3:71796340-71796359 | None:intergenic | 15.0% |
| !! | AAATTGTAAATGACTAAATT+CGG | - | chr6_3:71796608-71796627 | None:intergenic | 15.0% |
| !! | AAAATATCAACAACAAATTT+GGG | - | chr6_3:71796656-71796675 | None:intergenic | 15.0% |
| !! | TGTTATCATTAAATATTAAG+TGG | + | chr6_3:71798574-71798593 | Msa0958220:intron | 15.0% |
| !!! | TGATGATGATTTTTAAATTT+TGG | + | chr6_3:71798767-71798786 | Msa0958220:intron | 15.0% |
| !!! | GTATTGTTATTATTATTCTC+AGG | - | chr6_3:71795739-71795758 | None:intergenic | 20.0% |
| !! | AAAAACACGTTGAAATATTT+CGG | - | chr6_3:71796140-71796159 | None:intergenic | 20.0% |
| !! | AATTCATATTGTCATAAACA+CGG | - | chr6_3:71796176-71796195 | None:intergenic | 20.0% |
| !!! | TTTAGTCATTTACAATTTTC+TGG | + | chr6_3:71796610-71796629 | Msa0958220:intron | 20.0% |
| !!! | TTAGTCATTTACAATTTTCT+GGG | + | chr6_3:71796611-71796630 | Msa0958220:intron | 20.0% |
| !! | GAAAATATCAACAACAAATT+TGG | - | chr6_3:71796657-71796676 | None:intergenic | 20.0% |
| !!! | TTGTTGATATTTTCATAATG+AGG | + | chr6_3:71796663-71796682 | Msa0958220:intron | 20.0% |
| !!! | TCTGTTTTGTTTTATTAGAA+TGG | + | chr6_3:71796697-71796716 | Msa0958220:intron | 20.0% |
| !!! | TTTTGTTTTATTAGAATGGA+GGG | + | chr6_3:71796701-71796720 | Msa0958220:intron | 20.0% |
| !!! | ATTTTATGTTAAGCCTAAAT+TGG | + | chr6_3:71797368-71797387 | Msa0958220:intron | 20.0% |
| !!! | TTTTATGTTAAGCCTAAATT+GGG | + | chr6_3:71797369-71797388 | Msa0958220:intron | 20.0% |
| !! | GATATCAATTTGAGTATAAA+TGG | + | chr6_3:71797582-71797601 | Msa0958220:CDS | 20.0% |
| !! | ACAATATTAGAAAAAGAGTT+GGG | + | chr6_3:71797959-71797978 | Msa0958220:intron | 20.0% |
| !!! | TTTAACCTTTAGTTTTTTCT+AGG | - | chr6_3:71798120-71798139 | None:intergenic | 20.0% |
| !!! | AACTAAAGGTTAAAGTATTA+AGG | + | chr6_3:71798126-71798145 | Msa0958220:intron | 20.0% |
| !! | TAGAGATTAATGAGTTATAT+AGG | + | chr6_3:71798152-71798171 | Msa0958220:intron | 20.0% |
| !! | AGAGATTAATGAGTTATATA+GGG | + | chr6_3:71798153-71798172 | Msa0958220:intron | 20.0% |
| !! | TGATATATCATTGAACATTA+TGG | + | chr6_3:71798179-71798198 | Msa0958220:intron | 20.0% |
| !! | AATAAAATGTTGTCAAATAG+CGG | - | chr6_3:71798402-71798421 | None:intergenic | 20.0% |
| !! | TTATTCTAAATAGTGTATCA+CGG | + | chr6_3:71798417-71798436 | Msa0958220:intron | 20.0% |
| !!! | TAACTAAACTGCTTATTTTA+AGG | + | chr6_3:71798485-71798504 | Msa0958220:intron | 20.0% |
| !! | ACAAAATTGCTAAAACTTAT+GGG | - | chr6_3:71798671-71798690 | None:intergenic | 20.0% |
| !! | TACAAAATTGCTAAAACTTA+TGG | - | chr6_3:71798672-71798691 | None:intergenic | 20.0% |
| !! | TAATTAAAATTAAGCACAAG+AGG | - | chr6_3:71798725-71798744 | None:intergenic | 20.0% |
| !! | AATTATTCATCTTAAACTTC+TGG | - | chr6_3:71798882-71798901 | None:intergenic | 20.0% |
| !! | GAAAATATGGATATTATTAG+AGG | - | chr6_3:71798937-71798956 | None:intergenic | 20.0% |
| !!! | GAACTCTAAAATTAAAATGT+CGG | - | chr6_3:71799350-71799369 | None:intergenic | 20.0% |
| !!! | TTAATTTTGTTACAACTGAT+GGG | + | chr6_3:71799396-71799415 | Msa0958220:intron | 20.0% |
| !! | AATCAAATTAGATAGAAAGT+TGG | + | chr6_3:71799446-71799465 | Msa0958220:intron | 20.0% |
| !! | TGATACATAATAAGACATTA+TGG | + | chr6_3:71799775-71799794 | Msa0958220:intron | 20.0% |
| !!! | TGAATTTTGTTGATTTAGTT+AGG | + | chr6_3:71799899-71799918 | Msa0958220:intron | 20.0% |
| !!! | TTAAACTATTGATTCCTATT+TGG | + | chr6_3:71800157-71800176 | Msa0958220:intron | 20.0% |
| !!! | TAAACTATTGATTCCTATTT+GGG | + | chr6_3:71800158-71800177 | Msa0958220:intron | 20.0% |
| ! | GATGATTCTCTTTATTATGT+TGG | + | chr6_3:71795871-71795890 | Msa0958220:CDS | 25.0% |
| ! | GGATTAAACTTAACATGATA+AGG | - | chr6_3:71795919-71795938 | None:intergenic | 25.0% |
| ! | ATGTTAAGTTTAATCCTCAT+GGG | + | chr6_3:71795923-71795942 | Msa0958220:CDS | 25.0% |
| !! | GAAATATTTCAACGTGTTTT+TGG | + | chr6_3:71796139-71796158 | Msa0958220:intron | 25.0% |
| !!! | ATATTTCAAAGTGTTTTTCG+AGG | + | chr6_3:71796342-71796361 | Msa0958220:intron | 25.0% |
| ! | AAATGTTTATGTTGTTGCAT+AGG | + | chr6_3:71796420-71796439 | Msa0958220:intron | 25.0% |
| ! | AATGTTTATGTTGTTGCATA+GGG | + | chr6_3:71796421-71796440 | Msa0958220:intron | 25.0% |
| ! | AAATGTTTATGTTGTTGCAT+AGG | + | chr6_3:71796420-71796439 | Msa0958220:intron | 25.0% |
| ! | AATGTTTATGTTGTTGCATA+GGG | + | chr6_3:71796421-71796440 | Msa0958220:intron | 25.0% |
| !! | TAGTCATTTACAATTTTCTG+GGG | + | chr6_3:71796612-71796631 | Msa0958220:intron | 25.0% |
| !!! | GTTTTGTTTTATTAGAATGG+AGG | + | chr6_3:71796700-71796719 | Msa0958220:intron | 25.0% |
| ! | NNNNNNCCAGTATGAAAATG+TGG | + | chr6_3:71796830-71796849 | Msa0958220:intron | 25.0% |
| !! | ATAAAACCACATTTTCATAC+TGG | - | chr6_3:71796839-71796858 | None:intergenic | 25.0% |
| !! | TTTTATCTTTGAGTGTCTAA+GGG | + | chr6_3:71796853-71796872 | Msa0958220:intron | 25.0% |
| !! | TTTTGAATAAAGACCCAAAT+TGG | + | chr6_3:71797179-71797198 | Msa0958220:intron | 25.0% |
| ! | AAAATTGTAAGCACCAATTT+GGG | - | chr6_3:71797195-71797214 | None:intergenic | 25.0% |
| ! | AAAAATTGTAAGCACCAATT+TGG | - | chr6_3:71797196-71797215 | None:intergenic | 25.0% |
| ! | TTATTATACCGAAGACAAAT+TGG | + | chr6_3:71797269-71797288 | Msa0958220:intron | 25.0% |
| ! | TGTCATGACATGAATTAATT+TGG | + | chr6_3:71797340-71797359 | Msa0958220:intron | 25.0% |
| ! | ACAAGAGTAAATACACAATT+TGG | - | chr6_3:71797416-71797435 | None:intergenic | 25.0% |
| !!! | ACTCTTGTCTTTTACTTTTA+TGG | + | chr6_3:71797428-71797447 | Msa0958220:intron | 25.0% |
| !!! | CTCTTGTCTTTTACTTTTAT+GGG | + | chr6_3:71797429-71797448 | Msa0958220:intron | 25.0% |
| ! | AATCCATGAAATGATTGATA+AGG | - | chr6_3:71797615-71797634 | None:intergenic | 25.0% |
| ! | ATTTATAATTCTATCACGTC+TGG | - | chr6_3:71797938-71797957 | None:intergenic | 25.0% |
| ! | GACAATATTAGAAAAAGAGT+TGG | + | chr6_3:71797958-71797977 | Msa0958220:intron | 25.0% |
| ! | CAATATTAGAAAAAGAGTTG+GGG | + | chr6_3:71797960-71797979 | Msa0958220:intron | 25.0% |
| ! | TATATCATTGAACATTATGG+TGG | + | chr6_3:71798182-71798201 | Msa0958220:intron | 25.0% |
| ! | ATCAACAACACTTAAATAAG+TGG | - | chr6_3:71798312-71798331 | None:intergenic | 25.0% |
| !! | TATTTAAGTGTTGTTGATCT+TGG | + | chr6_3:71798314-71798333 | Msa0958220:intron | 25.0% |
| !!! | TGTGTTGATATTTAGCTTTT+AGG | + | chr6_3:71798527-71798546 | Msa0958220:intron | 25.0% |
| ! | TTATAGGATTTCTAACATTC+TGG | + | chr6_3:71798902-71798921 | Msa0958220:intron | 25.0% |
| ! | CAACTATGTATAGGAAAATA+TGG | - | chr6_3:71798950-71798969 | None:intergenic | 25.0% |
| ! | ACTTTGTACTAAATAGTGTA+CGG | + | chr6_3:71799046-71799065 | Msa0958220:intron | 25.0% |
| !! | GTTAATTTTGTTACAACTGA+TGG | + | chr6_3:71799395-71799414 | Msa0958220:intron | 25.0% |
| !! | TAATTTTGTTACAACTGATG+GGG | + | chr6_3:71799397-71799416 | Msa0958220:intron | 25.0% |
| ! | TTAACAGACAAACAAAACAA+CGG | - | chr6_3:71799930-71799949 | None:intergenic | 25.0% |
| ! | TTTGTTTGTCTGTTAAACTT+TGG | + | chr6_3:71799934-71799953 | Msa0958220:intron | 25.0% |
| ! | AGATCAAATAAAACCCAAAT+AGG | - | chr6_3:71800174-71800193 | None:intergenic | 25.0% |
| ! | CATTTCTCTTAAAAGAAGTT+AGG | + | chr6_3:71800207-71800226 | Msa0958220:intron | 25.0% |
| !!! | TGAAAATCTGCTCATTTTTT+TGG | - | chr6_3:71800828-71800847 | None:intergenic | 25.0% |
| GAAAGTAGAAGAGTGATAAA+GGG | - | chr6_3:71795690-71795709 | None:intergenic | 30.0% | |
| AGAAAGTAGAAGAGTGATAA+AGG | - | chr6_3:71795691-71795710 | None:intergenic | 30.0% | |
| CATGTTAAGTTTAATCCTCA+TGG | + | chr6_3:71795922-71795941 | Msa0958220:CDS | 30.0% | |
| !!! | ATATTTCAACGTGTTTTTGG+AGG | + | chr6_3:71796142-71796161 | Msa0958220:intron | 30.0% |
| TCATAGAGTGGAAAAAGTAA+CGG | - | chr6_3:71796285-71796304 | None:intergenic | 30.0% | |
| ! | GAGGTTTTTACAGTGTATTT+AGG | + | chr6_3:71796361-71796380 | Msa0958220:intron | 30.0% |
| ! | GTTTTATCTTTGAGTGTCTA+AGG | + | chr6_3:71796852-71796871 | Msa0958220:intron | 30.0% |
| TTTATCTTTGAGTGTCTAAG+GGG | + | chr6_3:71796854-71796873 | Msa0958220:intron | 30.0% | |
| AAAATTGTGAGGGATCAAAA+TGG | + | chr6_3:71797138-71797157 | Msa0958220:intron | 30.0% | |
| AAATTGTGAGGGATCAAAAT+GGG | + | chr6_3:71797139-71797158 | Msa0958220:intron | 30.0% | |
| GTTTGGATTTGATTGAGAAA+TGG | + | chr6_3:71797520-71797539 | Msa0958220:CDS | 30.0% | |
| GTTATACAAAAATGTTGCTC+AGG | + | chr6_3:71797713-71797732 | Msa0958220:intron | 30.0% | |
| TTATCATACAGCTGTAAAAC+CGG | + | chr6_3:71797751-71797770 | Msa0958220:intron | 30.0% | |
| TAAAACCGGTAATGTTGTAT+GGG | + | chr6_3:71797765-71797784 | Msa0958220:intron | 30.0% | |
| !!! | CACTTATTTTACTCTCATGT+TGG | - | chr6_3:71797883-71797902 | None:intergenic | 30.0% |
| TACCTGTAGATTCTGTAATA+AGG | + | chr6_3:71798046-71798065 | Msa0958220:intron | 30.0% | |
| AATAAGGAGAGTAGATAAGA+TGG | + | chr6_3:71798062-71798081 | Msa0958220:intron | 30.0% | |
| GAAGACCTAGAAAAAACTAA+AGG | + | chr6_3:71798112-71798131 | Msa0958220:intron | 30.0% | |
| ! | TGCATTGTATTTTGCTTAGA+GGG | + | chr6_3:71798261-71798280 | Msa0958220:intron | 30.0% |
| CTTCTGGTATAACTGATTAA+AGG | - | chr6_3:71798866-71798885 | None:intergenic | 30.0% | |
| ATATAACCTTGTTAGCTGAA+TGG | + | chr6_3:71799158-71799177 | Msa0958220:intron | 30.0% | |
| TAAAAACCATTCAGCTAACA+AGG | - | chr6_3:71799167-71799186 | None:intergenic | 30.0% | |
| ! | AATTTTGTTACAACTGATGG+GGG | + | chr6_3:71799398-71799417 | Msa0958220:intron | 30.0% |
| ACACAAAACAAGTTAGCATT+AGG | + | chr6_3:71799423-71799442 | Msa0958220:intron | 30.0% | |
| ACAAGTCATTCTTGAAAAGA+TGG | + | chr6_3:71799473-71799492 | Msa0958220:intron | 30.0% | |
| AGTTCAATAGTTAGAGAAAG+AGG | + | chr6_3:71799575-71799594 | Msa0958220:intron | 30.0% | |
| ! | ATCTAACCTATAGTTTTCCA+TGG | - | chr6_3:71799605-71799624 | None:intergenic | 30.0% |
| TTGTCAAATAGCTACTATTG+TGG | + | chr6_3:71799698-71799717 | Msa0958220:intron | 30.0% | |
| TGTCTAATGATCACAGAAAA+TGG | - | chr6_3:71799755-71799774 | None:intergenic | 30.0% | |
| ! | AGATTTTATGCATCAGGTTA+TGG | + | chr6_3:71799986-71800005 | Msa0958220:CDS | 30.0% |
| ! | GATTTTATGCATCAGGTTAT+GGG | + | chr6_3:71799987-71800006 | Msa0958220:CDS | 30.0% |
| ATGTTAGTACCATATTTGAC+GGG | - | chr6_3:71800031-71800050 | None:intergenic | 30.0% | |
| GATGTTAGTACCATATTTGA+CGG | - | chr6_3:71800032-71800051 | None:intergenic | 30.0% | |
| GTCAAATATGGTACTAACAT+CGG | + | chr6_3:71800031-71800050 | Msa0958220:CDS | 30.0% | |
| TCAAATATGGTACTAACATC+GGG | + | chr6_3:71800032-71800051 | Msa0958220:CDS | 30.0% | |
| TTGACTAAATGCTTGTTCAA+GGG | - | chr6_3:71800486-71800505 | None:intergenic | 30.0% | |
| ATATTCTGAATCGAGAACTT+CGG | - | chr6_3:71800696-71800715 | None:intergenic | 30.0% | |
| ! | TTCACACAACAAAACTGTTT+TGG | + | chr6_3:71800796-71800815 | Msa0958220:CDS | 30.0% |
| TTCCTGAATGAATCGTTTAT+CGG | - | chr6_3:71800894-71800913 | None:intergenic | 30.0% | |
| AGAAAGGAGAACTTGAATTA+TGG | + | chr6_3:71801059-71801078 | Msa0958220:CDS | 30.0% | |
| GAAAGGAGAACTTGAATTAT+GGG | + | chr6_3:71801060-71801079 | Msa0958220:CDS | 30.0% | |
| ! | TTTTACAACTATATCGTACG+AGG | + | chr6_3:71801165-71801184 | Msa0958220:CDS | 30.0% |
| AAATCCCTCTAGTTATTGAT+AGG | + | chr6_3:71801188-71801207 | Msa0958220:CDS | 30.0% | |
| GAATCCTATCAATAACTAGA+GGG | - | chr6_3:71801195-71801214 | None:intergenic | 30.0% | |
| CTCTAGTTATTGATAGGATT+CGG | + | chr6_3:71801194-71801213 | Msa0958220:CDS | 30.0% | |
| ATACCAATCCACTAAAAACC+CGG | + | chr6_3:71795502-71795521 | Msa0958220:five_prime_UTR | 35.0% | |
| !!! | GTTGAGATTGGGTTTTTTTG+GGG | - | chr6_3:71795561-71795580 | None:intergenic | 35.0% |
| !!! | GGTTGAGATTGGGTTTTTTT+GGG | - | chr6_3:71795562-71795581 | None:intergenic | 35.0% |
| !!! | TGGTTGAGATTGGGTTTTTT+TGG | - | chr6_3:71795563-71795582 | None:intergenic | 35.0% |
| ATAAAGGGATTAAACTACCG+AGG | - | chr6_3:71795675-71795694 | None:intergenic | 35.0% | |
| ! | GTATTATCGATAACTTGTCG+AGG | + | chr6_3:71796942-71796961 | Msa0958220:intron | 35.0% |
| TACAAACGATCTCTAAGTGT+AGG | + | chr6_3:71797109-71797128 | Msa0958220:intron | 35.0% | |
| GTGAGATACCAATTTGTCTT+CGG | - | chr6_3:71797280-71797299 | None:intergenic | 35.0% | |
| ! | ATTTTCTCGCAACCCAATTT+AGG | - | chr6_3:71797384-71797403 | None:intergenic | 35.0% |
| !!! | TTTGGGTTTTTGTTGTTGTG+TGG | + | chr6_3:71797488-71797507 | Msa0958220:intron | 35.0% |
| GGATTTGATTGAGAAATGGT+TGG | + | chr6_3:71797524-71797543 | Msa0958220:CDS | 35.0% | |
| GTAAAACCGGTAATGTTGTA+TGG | + | chr6_3:71797764-71797783 | Msa0958220:intron | 35.0% | |
| TTTGTCCCATACAACATTAC+CGG | - | chr6_3:71797773-71797792 | None:intergenic | 35.0% | |
| CGATAGTAAAATAAGCGTAG+AGG | + | chr6_3:71797817-71797836 | Msa0958220:intron | 35.0% | |
| TAGAGATGAAAATGTTGCGT+TGG | + | chr6_3:71797903-71797922 | Msa0958220:intron | 35.0% | |
| AGCACCTATAGTACAAAAGA+CGG | + | chr6_3:71797984-71798003 | Msa0958220:intron | 35.0% | |
| ! | TCTACCGTCTTTTGTACTAT+AGG | - | chr6_3:71797991-71798010 | None:intergenic | 35.0% |
| CTCCTTATTACAGAATCTAC+AGG | - | chr6_3:71798051-71798070 | None:intergenic | 35.0% | |
| AGTCAAATCACTATAGGCAA+AGG | + | chr6_3:71798090-71798109 | Msa0958220:intron | 35.0% | |
| ! | CTGCATTGTATTTTGCTTAG+AGG | + | chr6_3:71798260-71798279 | Msa0958220:intron | 35.0% |
| AAGGTTAAACCACTAATGTG+TGG | - | chr6_3:71798372-71798391 | None:intergenic | 35.0% | |
| CACAATGAGAATAGGTGTTA+TGG | + | chr6_3:71798619-71798638 | Msa0958220:intron | 35.0% | |
| TTTGGAGAATTGAAGTGTGA+AGG | + | chr6_3:71798785-71798804 | Msa0958220:intron | 35.0% | |
| TTGGAGAATTGAAGTGTGAA+GGG | + | chr6_3:71798786-71798805 | Msa0958220:intron | 35.0% | |
| CACGATTCACAACTATGTAT+AGG | - | chr6_3:71798959-71798978 | None:intergenic | 35.0% | |
| CTATACATAGTTGTGAATCG+TGG | + | chr6_3:71798957-71798976 | Msa0958220:intron | 35.0% | |
| AATAGCGACTATAGCACTAT+AGG | - | chr6_3:71799019-71799038 | None:intergenic | 35.0% | |
| TTGTACTAAATAGTGTACGG+CGG | + | chr6_3:71799049-71799068 | Msa0958220:intron | 35.0% | |
| TGTTGTCAAATAGTGGCTAT+AGG | - | chr6_3:71799106-71799125 | None:intergenic | 35.0% | |
| !! | ACTAGCATTGGCTCAAATAT+GGG | - | chr6_3:71799134-71799153 | None:intergenic | 35.0% |
| !! | AACTAGCATTGGCTCAAATA+TGG | - | chr6_3:71799135-71799154 | None:intergenic | 35.0% |
| GGTTATATCTCAACTAGCAT+TGG | - | chr6_3:71799146-71799165 | None:intergenic | 35.0% | |
| !! | GGTTTGTTGCATCAAGATAA+AGG | - | chr6_3:71799329-71799348 | None:intergenic | 35.0% |
| CACTATTAAGGTAGACTAGA+TGG | + | chr6_3:71799547-71799566 | Msa0958220:intron | 35.0% | |
| ! | AAACCTTTTCGCACTAGATA+GGG | - | chr6_3:71799811-71799830 | None:intergenic | 35.0% |
| ! | AAAACCTTTTCGCACTAGAT+AGG | - | chr6_3:71799812-71799831 | None:intergenic | 35.0% |
| ! | TAGTGCGAAAAGGTTTTTGA+CGG | + | chr6_3:71799815-71799834 | Msa0958220:intron | 35.0% |
| !!! | GTTGTTTGCTATGATTTTGC+AGG | + | chr6_3:71799956-71799975 | Msa0958220:intron | 35.0% |
| AGAATTTGACCCGTCAAATA+TGG | + | chr6_3:71800019-71800038 | Msa0958220:CDS | 35.0% | |
| AACGATAGTATCTCAATTGC+AGG | - | chr6_3:71800065-71800084 | None:intergenic | 35.0% | |
| TTATTATCCAGGGTAATCGA+CGG | + | chr6_3:71800127-71800146 | Msa0958220:intron | 35.0% | |
| CTTGACTAAATGCTTGTTCA+AGG | - | chr6_3:71800487-71800506 | None:intergenic | 35.0% | |
| TTTAGTCAAGCAAGAAAACG+AGG | + | chr6_3:71800497-71800516 | Msa0958220:CDS | 35.0% | |
| TATTGCCAACAGGATTTGAA+GGG | - | chr6_3:71800553-71800572 | None:intergenic | 35.0% | |
| ATATTGCCAACAGGATTTGA+AGG | - | chr6_3:71800554-71800573 | None:intergenic | 35.0% | |
| !! | AGAAGACTGAAAAGCATTTC+TGG | - | chr6_3:71800584-71800603 | None:intergenic | 35.0% |
| ! | CAATCGAAAGGTCTTTTGAT+AGG | - | chr6_3:71800751-71800770 | None:intergenic | 35.0% |
| TTCCGATAAACGATTCATTC+AGG | + | chr6_3:71800889-71800908 | Msa0958220:CDS | 35.0% | |
| CCAACCGAAATAGAATAAGA+CGG | + | chr6_3:71800924-71800943 | Msa0958220:CDS | 35.0% | |
| CAACCGAAATAGAATAAGAC+GGG | + | chr6_3:71800925-71800944 | Msa0958220:CDS | 35.0% | |
| ! | GTGGATTGTTTAACCAAACT+AGG | + | chr6_3:71800962-71800981 | Msa0958220:CDS | 35.0% |
| TCCAGGAGTTATGTTTATCT+TGG | - | chr6_3:71801104-71801123 | None:intergenic | 35.0% | |
| GATAAACATAACTCCTGGAT+CGG | + | chr6_3:71801105-71801124 | Msa0958220:CDS | 35.0% | |
| AAACAAATACGAAACCATCC+TGG | - | chr6_3:71801148-71801167 | None:intergenic | 35.0% | |
| CGAATCCTATCAATAACTAG+AGG | - | chr6_3:71801196-71801215 | None:intergenic | 35.0% | |
| ! | AACAAGTGTGATGGTGATGA+TGG | - | chr6_3:71795406-71795425 | None:intergenic | 40.0% |
| AAAGGAAAGGAAAGGAAAGG+AGG | - | chr6_3:71795449-71795468 | None:intergenic | 40.0% | |
| GAGAAAGGAAAGGAAAGGAA+AGG | - | chr6_3:71795452-71795471 | None:intergenic | 40.0% | |
| TGAGAGAGAAAGGAAAGGAA+AGG | - | chr6_3:71795457-71795476 | None:intergenic | 40.0% | |
| AATGAGTGAGTGAGAGAGAA+AGG | - | chr6_3:71795467-71795486 | None:intergenic | 40.0% | |
| ATTGGTATGGTGTGGTTGAA+GGG | - | chr6_3:71795490-71795509 | None:intergenic | 40.0% | |
| !! | TTTAGTGGATTGGTATGGTG+TGG | - | chr6_3:71795498-71795517 | None:intergenic | 40.0% |
| !!! | GGGTTTTTAGTGGATTGGTA+TGG | - | chr6_3:71795503-71795522 | None:intergenic | 40.0% |
| TACCAATCCACTAAAAACCC+GGG | + | chr6_3:71795503-71795522 | Msa0958220:five_prime_UTR | 40.0% | |
| !!! | TGGTGGGTTTTTTTTGGGTT+TGG | - | chr6_3:71795537-71795556 | None:intergenic | 40.0% |
| !!! | AGATTGGGTTTTTTTGGGGT+TGG | - | chr6_3:71795557-71795576 | None:intergenic | 40.0% |
| AGAAGAAGGTGGTTGAGATT+GGG | - | chr6_3:71795572-71795591 | None:intergenic | 40.0% | |
| AAGAAGAAGGTGGTTGAGAT+TGG | - | chr6_3:71795573-71795592 | None:intergenic | 40.0% | |
| AGGAACGATGAGTTTCATTC+CGG | - | chr6_3:71795617-71795636 | None:intergenic | 40.0% | |
| !! | GCTTGGTTTGTCTGATAACA+AGG | + | chr6_3:71795954-71795973 | Msa0958220:CDS | 40.0% |
| ! | AGTTTCTCGCGTGTCTTATT+TGG | + | chr6_3:71796104-71796123 | Msa0958220:intron | 40.0% |
| GTAGTTCACTCTATGCAGTT+CGG | - | chr6_3:71796206-71796225 | None:intergenic | 40.0% | |
| TGCATAGAGTGAACTACACA+GGG | + | chr6_3:71796209-71796228 | Msa0958220:intron | 40.0% | |
| ! | AGTTTCTTGCGCGTCTTATT+TGG | + | chr6_3:71796304-71796323 | Msa0958220:intron | 40.0% |
| AGAGTGCACGAGAAATTCAT+AGG | + | chr6_3:71796531-71796550 | Msa0958220:intron | 40.0% | |
| GAGTGCACGAGAAATTCATA+GGG | + | chr6_3:71796532-71796551 | Msa0958220:intron | 40.0% | |
| ! | TCTAAGGGGTTTGTTTGGAT+TGG | + | chr6_3:71796868-71796887 | Msa0958220:intron | 40.0% |
| TAGGCGTGAGAAAATTGTGA+GGG | + | chr6_3:71797128-71797147 | Msa0958220:intron | 40.0% | |
| !! | CAGAAAGACTGATTTGTTGC+TGG | + | chr6_3:71797309-71797328 | Msa0958220:intron | 40.0% |
| !! | GAAATGGTTGGTGAAGAACT+TGG | + | chr6_3:71797536-71797555 | Msa0958220:CDS | 40.0% |
| AACTTGGAGGGATCAATGAT+GGG | + | chr6_3:71797552-71797571 | Msa0958220:CDS | 40.0% | |
| GCGCCTTATCAATCATTTCA+TGG | + | chr6_3:71797609-71797628 | Msa0958220:CDS | 40.0% | |
| AAAAATGTTGCTCAGGCTGA+AGG | + | chr6_3:71797720-71797739 | Msa0958220:intron | 40.0% | |
| AAAATGTTGCTCAGGCTGAA+GGG | + | chr6_3:71797721-71797740 | Msa0958220:intron | 40.0% | |
| TGTTGTATGGGACAAAGTGT+TGG | + | chr6_3:71797777-71797796 | Msa0958220:intron | 40.0% | |
| GATGAAAATGTTGCGTTGGA+TGG | + | chr6_3:71797907-71797926 | Msa0958220:intron | 40.0% | |
| AGACGGTAGAAACTTTGCTT+AGG | + | chr6_3:71798001-71798020 | Msa0958220:intron | 40.0% | |
| GAAACTTTGCTTAGGTGGTT+TGG | + | chr6_3:71798009-71798028 | Msa0958220:intron | 40.0% | |
| GAGAGCAGTCAAATCACTAT+AGG | + | chr6_3:71798084-71798103 | Msa0958220:intron | 40.0% | |
| CTTATCTCACTAAGTGAGGT+CGG | - | chr6_3:71798224-71798243 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+AGG | - | chr6_3:71798228-71798247 | None:intergenic | 40.0% |
| TCACTTAGTGAGATAAGGCT+TGG | + | chr6_3:71798227-71798246 | Msa0958220:intron | 40.0% | |
| CAAATTGCACCACACATTAG+TGG | + | chr6_3:71798360-71798379 | Msa0958220:intron | 40.0% | |
| GTGTGTAGCACAATGAGAAT+AGG | + | chr6_3:71798611-71798630 | Msa0958220:intron | 40.0% | |
| GAATCGTGGAAAATAGCGAT+TGG | + | chr6_3:71798971-71798990 | Msa0958220:intron | 40.0% | |
| ! | GTTCTTTGTTGTCTTCGTAC+AGG | + | chr6_3:71799366-71799385 | Msa0958220:intron | 40.0% |
| !! | GACTCGTAGAAGCACTATTA+AGG | + | chr6_3:71799535-71799554 | Msa0958220:intron | 40.0% |
| TTAGAGAAAGAGGAAGACCA+TGG | + | chr6_3:71799585-71799604 | Msa0958220:intron | 40.0% | |
| GGAAGACCATGGAAAACTAT+AGG | + | chr6_3:71799596-71799615 | Msa0958220:intron | 40.0% | |
| ! | GTTGGCAGATTTTATGCATC+AGG | + | chr6_3:71799980-71799999 | Msa0958220:CDS | 40.0% |
| TTTATGCATCAGGTTATGGG+AGG | + | chr6_3:71799990-71800009 | Msa0958220:CDS | 40.0% | |
| TGAGATACTATCGTTCTGCT+TGG | + | chr6_3:71800070-71800089 | Msa0958220:CDS | 40.0% | |
| GATAATAAGGTGTAGGGACA+AGG | - | chr6_3:71800115-71800134 | None:intergenic | 40.0% | |
| TCCCTACACCTTATTATCCA+GGG | + | chr6_3:71800117-71800136 | Msa0958220:CDS | 40.0% | |
| ACCCTGGATAATAAGGTGTA+GGG | - | chr6_3:71800121-71800140 | None:intergenic | 40.0% | |
| TACCCTGGATAATAAGGTGT+AGG | - | chr6_3:71800122-71800141 | None:intergenic | 40.0% | |
| GTCGATTACCCTGGATAATA+AGG | - | chr6_3:71800128-71800147 | None:intergenic | 40.0% | |
| ! | AGTGATTATGCAGCTTTGAC+AGG | + | chr6_3:71800381-71800400 | Msa0958220:intron | 40.0% |
| ! | GTGATTATGCAGCTTTGACA+GGG | + | chr6_3:71800382-71800401 | Msa0958220:intron | 40.0% |
| ACAGGTATTAAGTCTATCCC+TGG | - | chr6_3:71800422-71800441 | None:intergenic | 40.0% | |
| ! | ATTGCTGACGAAGTATTTGC+AGG | + | chr6_3:71800635-71800654 | Msa0958220:CDS | 40.0% |
| TCAAAAGACCTTTCGATTGC+TGG | + | chr6_3:71800752-71800771 | Msa0958220:CDS | 40.0% | |
| CTCTAAATCCAGCAATCGAA+AGG | - | chr6_3:71800763-71800782 | None:intergenic | 40.0% | |
| ! | TCGATTGCTGGATTTAGAGT+CGG | + | chr6_3:71800764-71800783 | Msa0958220:CDS | 40.0% |
| GAAGTAACTAACCTCTGTGT+TGG | - | chr6_3:71800863-71800882 | None:intergenic | 40.0% | |
| ! | CCGTCTTATTCTATTTCGGT+TGG | - | chr6_3:71800927-71800946 | None:intergenic | 40.0% |
| ! | GCACCCGTCTTATTCTATTT+CGG | - | chr6_3:71800931-71800950 | None:intergenic | 40.0% |
| AGCACACTTGATTCCTAGTT+TGG | - | chr6_3:71800978-71800997 | None:intergenic | 40.0% | |
| ATCAGACCTTATAGCGAGAA+AGG | + | chr6_3:71801043-71801062 | Msa0958220:CDS | 40.0% | |
| AGTTCTCCTTTCTCGCTATA+AGG | - | chr6_3:71801052-71801071 | None:intergenic | 40.0% | |
| GCCAAGATAAACATAACTCC+TGG | + | chr6_3:71801100-71801119 | Msa0958220:CDS | 40.0% | |
| !! | AGTGTGATGGTGATGATGGA+TGG | - | chr6_3:71795402-71795421 | None:intergenic | 45.0% |
| GGAGGAAGAAACAAGTGTGA+TGG | - | chr6_3:71795415-71795434 | None:intergenic | 45.0% | |
| GGAAAGGAGGAGAAGAAGAA+GGG | - | chr6_3:71795436-71795455 | None:intergenic | 45.0% | |
| AGGAAAGGAGGAGAAGAAGA+AGG | - | chr6_3:71795437-71795456 | None:intergenic | 45.0% | |
| GTGAGTGAGAGAGAAAGGAA+AGG | - | chr6_3:71795462-71795481 | None:intergenic | 45.0% | |
| GATTGGTATGGTGTGGTTGA+AGG | - | chr6_3:71795491-71795510 | None:intergenic | 45.0% | |
| !! | TCATTGACCCGGGTTTTTAG+TGG | - | chr6_3:71795513-71795532 | None:intergenic | 45.0% |
| ! | TTGGGTTTGGTTCATTGACC+CGG | - | chr6_3:71795524-71795543 | None:intergenic | 45.0% |
| !!! | GGGGTTGGTGGGTTTTTTTT+GGG | - | chr6_3:71795542-71795561 | None:intergenic | 45.0% |
| !!! | TGGGGTTGGTGGGTTTTTTT+TGG | - | chr6_3:71795543-71795562 | None:intergenic | 45.0% |
| !!! | TGGGTTTTTTTGGGGTTGGT+GGG | - | chr6_3:71795553-71795572 | None:intergenic | 45.0% |
| !!! | TTGGGTTTTTTTGGGGTTGG+TGG | - | chr6_3:71795554-71795573 | None:intergenic | 45.0% |
| GAGGATGAAGAAGAAGAAGG+TGG | - | chr6_3:71795583-71795602 | None:intergenic | 45.0% | |
| GGAGAGGATGAAGAAGAAGA+AGG | - | chr6_3:71795586-71795605 | None:intergenic | 45.0% | |
| ! | AGTTTCATTCCGGTTCGAGA+GGG | - | chr6_3:71795607-71795626 | None:intergenic | 45.0% |
| ACCGTTACGACCTTGAACTA+CGG | - | chr6_3:71795647-71795666 | None:intergenic | 45.0% | |
| ! | AAGAAGCGTAGGAGAAGAAG+GGG | - | chr6_3:71795761-71795780 | None:intergenic | 45.0% |
| ! | GAAGAAGCGTAGGAGAAGAA+GGG | - | chr6_3:71795762-71795781 | None:intergenic | 45.0% |
| TTCGAACGAGAAGAAGAACG+AGG | - | chr6_3:71795784-71795803 | None:intergenic | 45.0% | |
| CGTTCGAATTTATCCTCTCG+TGG | + | chr6_3:71795796-71795815 | Msa0958220:CDS | 45.0% | |
| CCAAGCTGAATAATCCCATG+AGG | - | chr6_3:71795940-71795959 | None:intergenic | 45.0% | |
| CCTCATGGGATTATTCAGCT+TGG | + | chr6_3:71795937-71795956 | Msa0958220:CDS | 45.0% | |
| AGACACGCGAGAAACTCATT+CGG | - | chr6_3:71796100-71796119 | None:intergenic | 45.0% | |
| CTGCATAGAGTGAACTACAC+AGG | + | chr6_3:71796208-71796227 | Msa0958220:intron | 45.0% | |
| TTTAGGTGCACGAGAAACAC+AGG | + | chr6_3:71796378-71796397 | Msa0958220:intron | 45.0% | |
| TTAGGTGCACGAGAAACACA+GGG | + | chr6_3:71796379-71796398 | Msa0958220:intron | 45.0% | |
| TGAATTTCTCGTGCACTCTG+TGG | - | chr6_3:71796530-71796549 | None:intergenic | 45.0% | |
| ! | GAGTGTCTAAGGGGTTTGTT+TGG | + | chr6_3:71796863-71796882 | Msa0958220:intron | 45.0% |
| GTAGGCGTGAGAAAATTGTG+AGG | + | chr6_3:71797127-71797146 | Msa0958220:intron | 45.0% | |
| GGGTTGCGAGAAAATTGTGA+CGG | + | chr6_3:71797389-71797408 | Msa0958220:intron | 45.0% | |
| TTGTGTGGTGCAGTTGAGTT+TGG | + | chr6_3:71797503-71797522 | Msa0958220:intron | 45.0% | |
| !! | ATGGTTGGTGAAGAACTTGG+AGG | + | chr6_3:71797539-71797558 | Msa0958220:CDS | 45.0% |
| !! | TGGTTGGTGAAGAACTTGGA+GGG | + | chr6_3:71797540-71797559 | Msa0958220:CDS | 45.0% |
| GAACTTGGAGGGATCAATGA+TGG | + | chr6_3:71797551-71797570 | Msa0958220:CDS | 45.0% | |
| ACTTGGAGGGATCAATGATG+GGG | + | chr6_3:71797553-71797572 | Msa0958220:CDS | 45.0% | |
| !! | GTATGGGACAAAGTGTTGGT+CGG | + | chr6_3:71797781-71797800 | Msa0958220:intron | 45.0% |
| !! | TATGGGACAAAGTGTTGGTC+GGG | + | chr6_3:71797782-71797801 | Msa0958220:intron | 45.0% |
| ! | GATGTTGCATTGGAGAGTGT+TGG | + | chr6_3:71797846-71797865 | Msa0958220:intron | 45.0% |
| !! | TTGCATTGGAGAGTGTTGGT+CGG | + | chr6_3:71797850-71797869 | Msa0958220:intron | 45.0% |
| CGGTAGAAACTTTGCTTAGG+TGG | + | chr6_3:71798004-71798023 | Msa0958220:intron | 45.0% | |
| CGACCTCACTTAGTGAGATA+AGG | + | chr6_3:71798222-71798241 | Msa0958220:intron | 45.0% | |
| TAGAGGGAATGCATGTGTTG+TGG | + | chr6_3:71798277-71798296 | Msa0958220:intron | 45.0% | |
| ! | GTGTTGTTGATCTTGGATCG+CGG | + | chr6_3:71798321-71798340 | Msa0958220:intron | 45.0% |
| GTCAAATAGCGGTTAGAGCA+AGG | - | chr6_3:71798391-71798410 | None:intergenic | 45.0% | |
| GGAGCAGTGTTGTCAAATAG+TGG | - | chr6_3:71799113-71799132 | None:intergenic | 45.0% | |
| GTTGTCTTCGTACAGGAAAC+AGG | + | chr6_3:71799373-71799392 | Msa0958220:intron | 45.0% | |
| AAACCACCCAAGACAAGACT+CGG | - | chr6_3:71799499-71799518 | None:intergenic | 45.0% | |
| !!! | TTGGGTGGTTTTGACATCTG+TGG | + | chr6_3:71799508-71799527 | Msa0958220:intron | 45.0% |
| !!! | TGGGTGGTTTTGACATCTGT+GGG | + | chr6_3:71799509-71799528 | Msa0958220:intron | 45.0% |
| GCTATAGCGCATCGAACATT+AGG | - | chr6_3:71799655-71799674 | None:intergenic | 45.0% | |
| TGACCCTATCTAGTGCGAAA+AGG | + | chr6_3:71799805-71799824 | Msa0958220:intron | 45.0% | |
| ! | TGCGAAAAGGTTTTTGACGG+TGG | + | chr6_3:71799818-71799837 | Msa0958220:intron | 45.0% |
| ! | TGCTATGATTTTGCAGGCGT+TGG | + | chr6_3:71799962-71799981 | Msa0958220:intron | 45.0% |
| GGACAAGGAATGCATTTCCA+TGG | - | chr6_3:71800100-71800119 | None:intergenic | 45.0% | |
| GTCCCTACACCTTATTATCC+AGG | + | chr6_3:71800116-71800135 | Msa0958220:CDS | 45.0% | |
| TCAGTACTTCGACAGTGAAC+AGG | - | chr6_3:71800440-71800459 | None:intergenic | 45.0% | |
| AAACGAGGAGTCAAAGTTCG+CGG | + | chr6_3:71800512-71800531 | Msa0958220:CDS | 45.0% | |
| TCGAACCCTTCAAATCCTGT+TGG | + | chr6_3:71800545-71800564 | Msa0958220:CDS | 45.0% | |
| GGTGTCAGAATATTGCCAAC+AGG | - | chr6_3:71800563-71800582 | None:intergenic | 45.0% | |
| AGCCGCGTTCATATAGTGTA+CGG | + | chr6_3:71800725-71800744 | Msa0958220:CDS | 45.0% | |
| CTATATCTGCACCAACACAG+AGG | + | chr6_3:71800849-71800868 | Msa0958220:CDS | 45.0% | |
| ATCAGCCCAACAGAACATAC+CGG | - | chr6_3:71801011-71801030 | None:intergenic | 45.0% | |
| TTCTGTTGGGCTGATATGAG+TGG | + | chr6_3:71801016-71801035 | Msa0958220:CDS | 45.0% | |
| !! | ACCATCCTGGTTCTATGCAA+TGG | - | chr6_3:71801135-71801154 | None:intergenic | 45.0% |
| !!! | CTTAATTTTAATTATTATTA+CGG | + | chr6_3:71798731-71798750 | Msa0958220:intron | 5.0% |
| !! | TAAAAATATCTTAATTAAAA+AGG | + | chr6_3:71800244-71800263 | Msa0958220:intron | 5.0% |
| !!! | TTTAAAATATTTTTTATAGA+AGG | - | chr6_3:71800348-71800367 | None:intergenic | 5.0% |
| AAGGAGGAGAAGAAGAAGGG+AGG | - | chr6_3:71795433-71795452 | None:intergenic | 50.0% | |
| !!! | GACCCGGGTTTTTAGTGGAT+TGG | - | chr6_3:71795508-71795527 | None:intergenic | 50.0% |
| ! | TGGGTTTGGTTCATTGACCC+GGG | - | chr6_3:71795523-71795542 | None:intergenic | 50.0% |
| ! | GAGTTTCATTCCGGTTCGAG+AGG | - | chr6_3:71795608-71795627 | None:intergenic | 50.0% |
| CCTTGAACTACGGCTTGAAG+AGG | - | chr6_3:71795637-71795656 | None:intergenic | 50.0% | |
| CCTCTTCAAGCCGTAGTTCA+AGG | + | chr6_3:71795634-71795653 | Msa0958220:CDS | 50.0% | |
| GCCGTAGTTCAAGGTCGTAA+CGG | + | chr6_3:71795643-71795662 | Msa0958220:CDS | 50.0% | |
| ! | GGTCGTAACGGTTTTCTCCT+CGG | + | chr6_3:71795655-71795674 | Msa0958220:CDS | 50.0% |
| TCTCAGGACGACGTCGTTTA+AGG | - | chr6_3:71795723-71795742 | None:intergenic | 50.0% | |
| ! | GGAAGAAGCGTAGGAGAAGA+AGG | - | chr6_3:71795763-71795782 | None:intergenic | 50.0% |
| ! | GAAGAACGAGGAAGAAGCGT+AGG | - | chr6_3:71795772-71795791 | None:intergenic | 50.0% |
| ACTCGAAATAGAGCCACGAG+AGG | - | chr6_3:71795812-71795831 | None:intergenic | 50.0% | |
| ACGCGAGAAACTCATTCGGT+GGG | - | chr6_3:71796096-71796115 | None:intergenic | 50.0% | |
| CGCGCAAGAAACTCATAGAG+TGG | - | chr6_3:71796297-71796316 | None:intergenic | 50.0% | |
| AGGGTGCACGAGAAACTCAT+AGG | + | chr6_3:71796454-71796473 | Msa0958220:intron | 50.0% | |
| GGGTGCACGAGAAACTCATA+GGG | + | chr6_3:71796455-71796474 | Msa0958220:intron | 50.0% | |
| GAGGAGATGCGATGTTGCAT+TGG | + | chr6_3:71797836-71797855 | Msa0958220:intron | 50.0% | |
| AGAGTGCAGACCACATCACT+TGG | + | chr6_3:71798825-71798844 | Msa0958220:intron | 50.0% | |
| CAGACCACATCACTTGGTCA+TGG | + | chr6_3:71798831-71798850 | Msa0958220:intron | 50.0% | |
| GTCTCCATGACCAAGTGATG+TGG | - | chr6_3:71798838-71798857 | None:intergenic | 50.0% | |
| ! | AAGATGGCCGAGTCTTGTCT+TGG | + | chr6_3:71799489-71799508 | Msa0958220:intron | 50.0% |
| ! | AGATGGCCGAGTCTTGTCTT+GGG | + | chr6_3:71799490-71799509 | Msa0958220:intron | 50.0% |
| !!! | GGGTGGTTTTGACATCTGTG+GGG | + | chr6_3:71799510-71799529 | Msa0958220:intron | 50.0% |
| GCTTTGACAGGGACGTAAGA+TGG | + | chr6_3:71800393-71800412 | Msa0958220:intron | 50.0% | |
| GTATTTGCAGGCTCCACGTA+CGG | + | chr6_3:71800647-71800666 | Msa0958220:CDS | 50.0% | |
| GGCCGTACACTATATGAACG+CGG | - | chr6_3:71800730-71800749 | None:intergenic | 50.0% | |
| GCTTGCCATTGCATAGAACC+AGG | + | chr6_3:71801127-71801146 | Msa0958220:CDS | 50.0% | |
| GCCATTGCATAGAACCAGGA+TGG | + | chr6_3:71801131-71801150 | Msa0958220:CDS | 50.0% | |
| TCATCCTCTCCCTCTCGAAC+CGG | + | chr6_3:71795595-71795614 | Msa0958220:CDS | 55.0% | |
| CACGCGAGAAACTCATTCGG+TGG | - | chr6_3:71796097-71796116 | None:intergenic | 55.0% | |
| AGGGCGCACGAGAAACTGAT+AGG | + | chr6_3:71796228-71796247 | Msa0958220:intron | 55.0% | |
| GGGCGCACGAGAAACTGATA+GGG | + | chr6_3:71796229-71796248 | Msa0958220:intron | 55.0% | |
| TTGCATAGGGTGAGCTGCAC+AGG | + | chr6_3:71796434-71796453 | Msa0958220:intron | 55.0% | |
| TGCATAGGGTGAGCTGCACA+GGG | + | chr6_3:71796435-71796454 | Msa0958220:intron | 55.0% | |
| ACTAAGTGAGGTCGGCTACG+TGG | - | chr6_3:71798216-71798235 | None:intergenic | 55.0% | |
| TCGTTCTGCTTGGCAGACCA+TGG | + | chr6_3:71800080-71800099 | Msa0958220:CDS | 55.0% | |
| !! | GAAAGTGCCGTCGATTACCC+TGG | - | chr6_3:71800137-71800156 | None:intergenic | 55.0% |
| AAACTCCTCGCTTCCGTACG+TGG | - | chr6_3:71800663-71800682 | None:intergenic | 55.0% | |
| ACGGGTGCACGATGAGTTTG+TGG | + | chr6_3:71800943-71800962 | Msa0958220:CDS | 55.0% | |
| AAGTGTGCTAAGAGCAGCGC+CGG | + | chr6_3:71800989-71801008 | Msa0958220:CDS | 55.0% | |
| !! | CAGCGCCGGTATGTTCTGTT+GGG | + | chr6_3:71801003-71801022 | Msa0958220:CDS | 55.0% |
| ATGCAATGGCAAGCCGATCC+AGG | - | chr6_3:71801121-71801140 | None:intergenic | 55.0% | |
| ! | CATTCCGGTTCGAGAGGGAG+AGG | - | chr6_3:71795602-71795621 | None:intergenic | 60.0% |
| ! | TGGCCGAGTCTTGTCTTGGG+TGG | + | chr6_3:71799493-71799512 | Msa0958220:intron | 60.0% |
| AGGGACGTAAGATGGCGTCC+AGG | + | chr6_3:71800401-71800420 | Msa0958220:intron | 60.0% | |
| GGGACGTAAGATGGCGTCCA+GGG | + | chr6_3:71800402-71800421 | Msa0958220:intron | 60.0% | |
| !! | GCAGCGCCGGTATGTTCTGT+TGG | + | chr6_3:71801002-71801021 | Msa0958220:CDS | 60.0% |
| AGGCTCCACGTACGGAAGCG+AGG | + | chr6_3:71800655-71800674 | Msa0958220:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 71795369 | 71801249 | 71795369 | ID=Msa0958220;Name=Msa0958220 |
| chr6_3 | mRNA | 71795369 | 71801249 | 71795369 | ID=Msa0958220-mRNA-1;Parent=Msa0958220;Name=Msa0958220-mRNA-1;_AED=0.03;_eAED=0.03;_QI=160|0.66|0.75|1|1|1|4|0|529 |
| chr6_3 | exon | 71795369 | 71795975 | 71795369 | ID=Msa0958220-mRNA-1:exon:13043;Parent=Msa0958220-mRNA-1 |
| chr6_3 | exon | 71797516 | 71797650 | 71797516 | ID=Msa0958220-mRNA-1:exon:13044;Parent=Msa0958220-mRNA-1 |
| chr6_3 | exon | 71799978 | 71800138 | 71799978 | ID=Msa0958220-mRNA-1:exon:13045;Parent=Msa0958220-mRNA-1 |
| chr6_3 | exon | 71800403 | 71801249 | 71800403 | ID=Msa0958220-mRNA-1:exon:13046;Parent=Msa0958220-mRNA-1 |
| chr6_3 | five_prime_UTR | 71795369 | 71795528 | 71795369 | ID=Msa0958220-mRNA-1:five_prime_utr;Parent=Msa0958220-mRNA-1 |
| chr6_3 | CDS | 71795529 | 71795975 | 71795529 | ID=Msa0958220-mRNA-1:cds;Parent=Msa0958220-mRNA-1 |
| chr6_3 | CDS | 71797516 | 71797650 | 71797516 | ID=Msa0958220-mRNA-1:cds;Parent=Msa0958220-mRNA-1 |
| chr6_3 | CDS | 71799978 | 71800138 | 71799978 | ID=Msa0958220-mRNA-1:cds;Parent=Msa0958220-mRNA-1 |
| chr6_3 | CDS | 71800403 | 71801249 | 71800403 | ID=Msa0958220-mRNA-1:cds;Parent=Msa0958220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
