AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1442020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442020 MtrunA17_Chr3g0133251 96.324 544 14 3 1 541 1 541 0.0 1065
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442020 AT5G49970.1 74.012 481 122 2 61 541 53 530 0.0 761
Msa1442020 AT5G49970.2 73.913 414 96 2 75 488 65 466 0.0 646

Find 144 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTGTAGATATTCCTTC+TGG 0.185585 tig0029609:-13169 Msa1442020:CDS
CATGAACATTACCTGATTAA+TGG 0.185780 tig0029609:+12716 None:intergenic
AACTTCTTTGCACAGAATTT+TGG 0.186628 tig0029609:+12933 None:intergenic
CGTAATAATCATAATCAAAT+TGG 0.195978 tig0029609:-13211 Msa1442020:CDS
CGTGTTCTTGATTGCCTTGT+TGG 0.221302 tig0029609:+14800 None:intergenic
ATGAACATTACCTGATTAAT+GGG 0.239677 tig0029609:+12717 None:intergenic
TTTAAAATTGTTAAGAAAGT+TGG 0.244134 tig0029609:-14850 Msa1442020:five_prime_UTR
ATTACCCGCAGTTCCGTAAA+TGG 0.255310 tig0029609:-12399 Msa1442020:intron
TACGAAAAGAAATAAATCTT+TGG 0.292429 tig0029609:+13230 None:intergenic
TCATTGATGGTACATTTATA+TGG 0.297221 tig0029609:-14713 Msa1442020:CDS
ACTCATCACACTGAATTATC+AGG 0.310827 tig0029609:+8471 None:intergenic
GACTGAGTCGGAATCGAAAT+TGG 0.312666 tig0029609:+14415 None:intergenic
CACATGGATGTTCCAGGATA+TGG 0.314269 tig0029609:+12834 None:intergenic
TCACGGATCGTATTGCTAAA+AGG 0.325277 tig0029609:-11535 Msa1442020:CDS
TCACTTTGGTTATAAGCCTT+TGG 0.327823 tig0029609:-13838 Msa1442020:CDS
GAACAAAAGTACCTCATATA+TGG 0.332646 tig0029609:+14192 None:intergenic
ATGTTTGGATTCTCATTTCA+TGG 0.338142 tig0029609:-13568 Msa1442020:intron
ACGCATCATCAAACCATTTA+CGG 0.338547 tig0029609:+12386 None:intergenic
ACCTGGTCTTCAAGAAATTC+TGG 0.347595 tig0029609:+12750 None:intergenic
TTAAAATTGTTAAGAAAGTT+GGG 0.349337 tig0029609:-14849 Msa1442020:five_prime_UTR
CAACAGCTTCTTGTTGTTTG+AGG 0.350405 tig0029609:+14387 None:intergenic
CGTTTCAGGGTATTCTTCTC+AGG 0.360589 tig0029609:-14490 Msa1442020:intron
AAATTCTGTGCAAAGAAGTT+TGG 0.367242 tig0029609:-12930 Msa1442020:CDS
AACCCAGCATATAGAGGCTT+GGG 0.375181 tig0029609:+13795 None:intergenic
ATTCTAGTAGATGCCATGTT+TGG 0.376534 tig0029609:-13583 Msa1442020:CDS
CAATCAAGAACACGCGATTC+TGG 0.377899 tig0029609:-14791 Msa1442020:five_prime_UTR
GTTGACAAGGCCATAGCATT+TGG 0.383761 tig0029609:+12343 None:intergenic
TGGATATGTACCAACATATC+AGG 0.404323 tig0029609:+13103 None:intergenic
TTTGAGGAGGCTTTCCAATT+CGG 0.407800 tig0029609:+12808 None:intergenic
AAATCATCAAAGGGAGGCCT+TGG 0.412331 tig0029609:+13256 None:intergenic
TAACAATGGTGGTGATGGTC+TGG 0.413619 tig0029609:-13880 Msa1442020:CDS
CACAAACTATGAAAGTCAAA+AGG 0.420524 tig0029609:-11389 Msa1442020:CDS
CACCATTTCTAAGCAGAATC+AGG 0.421178 tig0029609:+8258 None:intergenic
AGAAATCTCGCTTGCATGAC+AGG 0.429134 tig0029609:-9089 Msa1442020:intron
GAAACTCTCATGGGTCCTCT+TGG 0.431182 tig0029609:-14356 Msa1442020:CDS
GTAGAAAATGATCGAATTGT+AGG 0.431980 tig0029609:+14467 None:intergenic
TACTAGAATGTCAAAGTCCT+TGG 0.435535 tig0029609:+13597 None:intergenic
GGAGGCAGACCCCATTAATC+AGG 0.438428 tig0029609:-12727 Msa1442020:intron
CTAAAAGGCTTTGACAAGGA+TGG 0.439667 tig0029609:-11520 Msa1442020:CDS
GAATTGGTAATGTTGTTGTA+TGG 0.442552 tig0029609:+14659 None:intergenic
ATTGTCGATCCCTTTCTTGT+CGG 0.451134 tig0029609:-13644 Msa1442020:CDS
CGGACACACATGGATGTTCC+AGG 0.453352 tig0029609:+12828 None:intergenic
TACGGAGAAGAATTGAAGAA+AGG 0.456141 tig0029609:+14580 None:intergenic
ACATCCATGTGTGTCCGAAT+TGG 0.458514 tig0029609:-12822 Msa1442020:CDS
ACGGAGAAGAATTGAAGAAA+GGG 0.459666 tig0029609:+14581 None:intergenic
TCTCTGTAGATATTCCTTCT+GGG 0.460526 tig0029609:-13168 Msa1442020:CDS
TGAAGAGATGCGTTCATTGA+TGG 0.462899 tig0029609:-14726 Msa1442020:exon
GATTGAGATTGCAGTTCCAT+TGG 0.463149 tig0029609:-8373 Msa1442020:three_prime_UTR
ATGAATGAGTGATAGTGAAT+TGG 0.474514 tig0029609:+14643 None:intergenic
ATTTGTTGACGGATAAGAAA+AGG 0.478197 tig0029609:-14823 Msa1442020:five_prime_UTR
CTTATACTTCCACCATATCC+TGG 0.480379 tig0029609:-12846 Msa1442020:CDS
CTTCAGCGTCGACCAACTCA+TGG 0.481760 tig0029609:-14333 Msa1442020:intron
GACCTGATTCTGCTTAGAAA+TGG 0.485110 tig0029609:-8260 Msa1442020:three_prime_UTR
CGTCCTAGAGGTAGTCAGAT+TGG 0.485609 tig0029609:-9534 Msa1442020:CDS
GCTTATAACCAAAGTGATGC+AGG 0.486106 tig0029609:+13844 None:intergenic
TTTCAATTTCAGGAATTGGC+TGG 0.487134 tig0029609:-14232 Msa1442020:intron
TACGTTCCCCATGAGATAGA+TGG 0.495915 tig0029609:-8526 Msa1442020:CDS
TTGGGATGGTTTAAACCGAC+AGG 0.496012 tig0029609:-11323 Msa1442020:intron
TTCTGTGCAAAGAAGTTTGG+CGG 0.497061 tig0029609:-12927 Msa1442020:CDS
AAGTTGGGTAAATTTGTTGA+CGG 0.501052 tig0029609:-14834 Msa1442020:five_prime_UTR
TAGAGAAATAATAATAATTG+TGG 0.502102 tig0029609:+14618 None:intergenic
AGATCTTCCACCGACAAGAA+AGG 0.505249 tig0029609:+13634 None:intergenic
TTCTGGGTGGCATGTTGAAG+AGG 0.505414 tig0029609:-13152 Msa1442020:CDS
GTTGAAGAGGGAGATGTTGA+TGG 0.505649 tig0029609:-13139 Msa1442020:CDS
GCCCGTCACCTGCATCACTT+TGG 0.506219 tig0029609:-13852 Msa1442020:CDS
AGGAATTAAACCTGATATGT+TGG 0.509098 tig0029609:-13113 Msa1442020:intron
TAACCCAGCATATAGAGGCT+TGG 0.510047 tig0029609:+13794 None:intergenic
CGTCGCTACTTCCATATATG+AGG 0.510638 tig0029609:-14203 Msa1442020:intron
ATATCTACAGAGACTATAAC+CGG 0.511564 tig0029609:+13178 None:intergenic
ATATGCTGGGTTAGTTACTC+AGG 0.512302 tig0029609:-13784 Msa1442020:intron
TAATGGGGTCTGCCTCCACC+TGG 0.513228 tig0029609:+12733 None:intergenic
GTCGATCCCTTTCTTGTCGG+TGG 0.513702 tig0029609:-13641 Msa1442020:CDS
CTAATTGTCCAGGTTCTCCA+AGG 0.520404 tig0029609:-13273 Msa1442020:intron
CCTGGTAACAATGGTGGTGA+TGG 0.521724 tig0029609:-13885 Msa1442020:CDS
GAGGGAGATGTTGATGGCAC+AGG 0.521926 tig0029609:-13133 Msa1442020:CDS
TTGTCAACTGTAGGAAAGGA+TGG 0.523925 tig0029609:-12328 Msa1442020:CDS
GATCTTCCACCGACAAGAAA+GGG 0.524841 tig0029609:+13635 None:intergenic
ACCAAAGTGATGCAGGTGAC+GGG 0.525452 tig0029609:+13851 None:intergenic
TCCAGAATTTCTTGAAGACC+AGG 0.526116 tig0029609:-12751 Msa1442020:CDS
GTAACTAACCCAGCATATAG+AGG 0.527504 tig0029609:+13789 None:intergenic
GACTACCTCTAGGACGGCTA+TGG 0.527753 tig0029609:+9541 None:intergenic
CTTTGGATCAAATCATCAAA+GGG 0.528514 tig0029609:+13247 None:intergenic
AATTGGTAATGTTGTTGTAT+GGG 0.528760 tig0029609:+14660 None:intergenic
AACCAAAGTGATGCAGGTGA+CGG 0.533269 tig0029609:+13850 None:intergenic
GCTATGGAAGGTTGAGCGGT+TGG 0.534952 tig0029609:-8497 Msa1442020:CDS
GTTCTTACTATATGTGGTCC+TGG 0.535808 tig0029609:-13903 Msa1442020:CDS
CCATCACCACCATTGTTACC+AGG 0.540694 tig0029609:+13885 None:intergenic
ACAAACTATGAAAGTCAAAA+GGG 0.541347 tig0029609:-11388 Msa1442020:CDS
TGAGATTGATGAAACTCTCA+TGG 0.542247 tig0029609:-14366 Msa1442020:CDS
CATTAGAGTTCTGTAGTGAC+TGG 0.545490 tig0029609:-9419 Msa1442020:intron
AGTCGTGTTCTTACTATATG+TGG 0.545920 tig0029609:-13909 Msa1442020:CDS
GGCCTTGTCAACTGTAGGAA+AGG 0.550230 tig0029609:-12332 Msa1442020:CDS
CTTTCCAATTCGGACACACA+TGG 0.551115 tig0029609:+12818 None:intergenic
AATGCGTTGCATTATTCCAA+TGG 0.551836 tig0029609:+8357 None:intergenic
TGCGTTGGCTGCGAGTTTGA+AGG 0.554483 tig0029609:-12368 Msa1442020:CDS
TGGAGCAATAGTCAGCAAGC+AGG 0.559556 tig0029609:-9514 Msa1442020:intron
AGAATTAACAAACCATGAGT+TGG 0.560420 tig0029609:+14321 None:intergenic
CTCATCACACTGAATTATCA+GGG 0.561810 tig0029609:+8472 None:intergenic
CGGATAAGAAAAGGCCAACA+AGG 0.562450 tig0029609:-14814 Msa1442020:five_prime_UTR
ATCCTTTCCTACAGTTGACA+AGG 0.563043 tig0029609:+12330 None:intergenic
AGAGCTGAAATATCGATTTG+AGG 0.565098 tig0029609:+12792 None:intergenic
CAATGGTGGTGATGGTCTGG+TGG 0.565708 tig0029609:-13877 Msa1442020:CDS
GAGAAGAATTGAAGAAAGGG+AGG 0.568457 tig0029609:+14584 None:intergenic
TCACGAGCAGTACAAAGAGC+TGG 0.573144 tig0029609:-9384 Msa1442020:CDS
AGAGTTCTGTAGTGACTGGT+AGG 0.575728 tig0029609:-9415 Msa1442020:CDS
CGCTTTGGGTAACAGACCAA+AGG 0.576679 tig0029609:+13822 None:intergenic
ATTGGTAATGTTGTTGTATG+GGG 0.580281 tig0029609:+14661 None:intergenic
GTGTGATGAGTTTACCCCAC+CGG 0.580702 tig0029609:-8459 Msa1442020:three_prime_UTR
TTTGAAGGAACCAAATGCTA+TGG 0.581375 tig0029609:-12353 Msa1442020:CDS
TCTTTGGATCAAATCATCAA+AGG 0.584306 tig0029609:+13246 None:intergenic
CAACTGGCTGCAGCTCATCA+CGG 0.584760 tig0029609:-11552 Msa1442020:intron
ATTTCTTGAAGACCAGGTGG+AGG 0.597398 tig0029609:-12745 Msa1442020:CDS
TAAATGGTTTGATGATGCGT+TGG 0.600021 tig0029609:-12383 Msa1442020:CDS
TTTAGATGAAGAAGTGATTG+TGG 0.600966 tig0029609:+14445 None:intergenic
GCTCCAATCTGACTACCTCT+AGG 0.601768 tig0029609:+9531 None:intergenic
AAGTCCTTGGAGAAATCTGA+TGG 0.606006 tig0029609:+13610 None:intergenic
TCTGGGTGGCATGTTGAAGA+GGG 0.609291 tig0029609:-13151 Msa1442020:CDS
TGTTCAGAAAGTTTCTGATG+AGG 0.615330 tig0029609:-9580 Msa1442020:CDS
ATGGATGTTCCAGGATATGG+TGG 0.617263 tig0029609:+12837 None:intergenic
TCTTCAACATGCCACCCAGA+AGG 0.618781 tig0029609:+13154 None:intergenic
AGAACACGACTATACTCGCC+CGG 0.624532 tig0029609:+13921 None:intergenic
ACCCAGCATATAGAGGCTTG+GGG 0.628100 tig0029609:+13796 None:intergenic
GCTATGGCCTTGTCAACTGT+AGG 0.630441 tig0029609:-12337 Msa1442020:CDS
GTCGGAATCGAAATTGGACA+TGG 0.635523 tig0029609:+14421 None:intergenic
GCTGAAATATCGATTTGAGG+AGG 0.636380 tig0029609:+12795 None:intergenic
CAATCTGACTACCTCTAGGA+CGG 0.639748 tig0029609:+9535 None:intergenic
TTTGAGGTAAGTGACTGAGT+CGG 0.651593 tig0029609:+14403 None:intergenic
AAAAGCTATGGAAGGTTGAG+CGG 0.651670 tig0029609:-8501 Msa1442020:CDS
ATTGCTAAAAGGCTTTGACA+AGG 0.653672 tig0029609:-11524 Msa1442020:CDS
TTGACAAGGATGGATTTGTG+TGG 0.659196 tig0029609:-11510 Msa1442020:intron
CTGGTAGTAAAATTGAAGTG+TGG 0.660046 tig0029609:-14772 Msa1442020:five_prime_UTR
GCTTAGAAATGGTGAGTATG+CGG 0.660258 tig0029609:-8249 Msa1442020:three_prime_UTR
TCTACCATCAGATTTCTCCA+AGG 0.661275 tig0029609:-13614 Msa1442020:CDS
AGAATTTCTTGAAGACCAGG+TGG 0.663417 tig0029609:-12748 Msa1442020:CDS
CCCAGCATATAGAGGCTTGG+GGG 0.666571 tig0029609:+13797 None:intergenic
CTGTAGATATTCCTTCTGGG+TGG 0.670404 tig0029609:-13165 Msa1442020:CDS
ATGAAATGAGAATCCAAACA+TGG 0.678723 tig0029609:+13570 None:intergenic
ATATGTGGTCCTGGTAACAA+TGG 0.681572 tig0029609:-13894 Msa1442020:CDS
TGGATCAAATCATCAAAGGG+AGG 0.684546 tig0029609:+13250 None:intergenic
TGGTCGACGCTGAAGCCAAG+AGG 0.686919 tig0029609:+14341 None:intergenic
TATTTCCATAGCCGTCCTAG+AGG 0.687448 tig0029609:-9546 Msa1442020:CDS
GAGATTGATGAAACTCTCAT+GGG 0.695408 tig0029609:-14365 Msa1442020:CDS
TGAACATTACCTGATTAATG+GGG 0.704539 tig0029609:+12718 None:intergenic
TGTGGTCCTGGTAACAATGG+TGG 0.732229 tig0029609:-13891 Msa1442020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAATGAAGAA+AGG + tig0029609:8838-8857 None:intergenic 10.0%
!! TTATTTGTTTATTTAAACAT+TGG - tig0029609:10054-10073 Msa1442020:intron 10.0%
!!! TTTTATTAAAAAAGAAGTTT+CGG - tig0029609:12433-12452 Msa1442020:intron 10.0%
!!! AATCTTAATATTTTTAATAG+AGG + tig0029609:12505-12524 None:intergenic 10.0%
!! TCTATTAAAAATATTAAGAT+TGG - tig0029609:12504-12523 Msa1442020:intron 10.0%
!!! AAAAAACAATTTTATGTATT+CGG + tig0029609:12622-12641 None:intergenic 10.0%
!!! AATCAACTAAATATTTTTTT+TGG + tig0029609:13321-13340 None:intergenic 10.0%
!!! TGATTATTTAAAACTTTTTT+TGG - tig0029609:14411-14430 Msa1442020:CDS 10.0%
!!! TTTAAAATTGTTAAGAAAGT+TGG - tig0029609:8266-8285 Msa1442020:three_prime_UTR 15.0%
!! TTAAAATTGTTAAGAAAGTT+GGG - tig0029609:8267-8286 Msa1442020:three_prime_UTR 15.0%
!! TAGAGAAATAATAATAATTG+TGG + tig0029609:8501-8520 None:intergenic 15.0%
!! TCATGATTGAATTATATTAA+CGG + tig0029609:9137-9156 None:intergenic 15.0%
!! AAAGAAAAGAAAGAAAAAAA+TGG + tig0029609:9397-9416 None:intergenic 15.0%
!! CAATTATAAAATAACTAATC+AGG + tig0029609:10943-10962 None:intergenic 15.0%
!!! CTGATTAGTTATTTTATAAT+TGG - tig0029609:10941-10960 Msa1442020:intron 15.0%
!! ATTTAATGTTAGAATTTCTT+TGG - tig0029609:11645-11664 Msa1442020:intron 15.0%
!! AGTTGCAAATAATAATAATA+TGG + tig0029609:13207-13226 None:intergenic 15.0%
!!! TTTTATTGCTTTTTTTTTCT+AGG - tig0029609:13497-13516 Msa1442020:intron 15.0%
!!! ATGACAATTTTTACTTTAAA+AGG - tig0029609:14251-14270 Msa1442020:intron 15.0%
!!! AAAAGTTTTAAATAATCATG+AGG + tig0029609:14409-14428 None:intergenic 15.0%
!!! AACTGAATTGATTTAATTAG+AGG + tig0029609:8585-8604 None:intergenic 20.0%
!! AAAAAAAAATGAAGAAAGGT+TGG + tig0029609:8834-8853 None:intergenic 20.0%
!! AAAACTAACAAACAAAGTAT+CGG + tig0029609:9010-9029 None:intergenic 20.0%
!!! TATAAAAATGGATTTGGATT+TGG + tig0029609:9682-9701 None:intergenic 20.0%
!! TACGAAAAGAAATAAATCTT+TGG + tig0029609:9889-9908 None:intergenic 20.0%
!! CGTAATAATCATAATCAAAT+TGG - tig0029609:9905-9924 Msa1442020:intron 20.0%
!! TAGTCATGTAAAGAAATTAT+AGG - tig0029609:11024-11043 Msa1442020:intron 20.0%
!! AGTCATGTAAAGAAATTATA+GGG - tig0029609:11025-11044 Msa1442020:intron 20.0%
!!! ATATGGCTTTTAAAATATTC+TGG + tig0029609:11159-11178 None:intergenic 20.0%
!!! TGTTTTTATTAGTTGTATGA+TGG - tig0029609:11250-11269 Msa1442020:intron 20.0%
!!! GTTTTTATTAGTTGTATGAT+GGG - tig0029609:11251-11270 Msa1442020:intron 20.0%
!! ATGCATATATTTAATTACAC+AGG + tig0029609:11320-11339 None:intergenic 20.0%
!! AATATTACACATATTATGGT+GGG + tig0029609:11519-11538 None:intergenic 20.0%
!! ATTTCTTTGGCAATATTATT+AGG - tig0029609:11658-11677 Msa1442020:intron 20.0%
!!! ATGCATCAATTCTTTTTTAT+TGG - tig0029609:11774-11793 Msa1442020:intron 20.0%
!!! TGCATCAATTCTTTTTTATT+GGG - tig0029609:11775-11794 Msa1442020:intron 20.0%
!! AATATGTCTTTCTATGTATT+AGG + tig0029609:12391-12410 None:intergenic 20.0%
!!! TATTTTTAATAGAGGTGATA+AGG + tig0029609:12497-12516 None:intergenic 20.0%
!!! TGCAATTTTTATTTAATCTG+TGG - tig0029609:12696-12715 Msa1442020:intron 20.0%
!! GAAATAAAAGATACTACATA+AGG + tig0029609:12812-12831 None:intergenic 20.0%
!! AAACTTTCAATTTCTTAAAG+TGG - tig0029609:12871-12890 Msa1442020:CDS 20.0%
!! GCAAATAATAATAATATGGA+TGG + tig0029609:13203-13222 None:intergenic 20.0%
!! ATTAGTATTACTTCCTAAAA+AGG - tig0029609:13265-13284 Msa1442020:intron 20.0%
!! TGTTTAATTAACTGAATATG+CGG + tig0029609:14297-14316 None:intergenic 20.0%
!! AGTTAATTAAACAAGTAGAA+GGG - tig0029609:14304-14323 Msa1442020:intron 20.0%
!!! TTTTAAATAATCATGAGGTA+AGG + tig0029609:14404-14423 None:intergenic 20.0%
!!! ATATCAATCAGAAATTTTCA+AGG + tig0029609:14541-14560 None:intergenic 20.0%
!! TCATTGATGGTACATTTATA+TGG - tig0029609:8403-8422 Msa1442020:three_prime_UTR 25.0%
!!! AATTGGTAATGTTGTTGTAT+GGG + tig0029609:8459-8478 None:intergenic 25.0%
! AGTAAGAGAGAAATTAGTTA+CGG + tig0029609:8557-8576 None:intergenic 25.0%
!! ATATTTACTAGTTTCGTTTC+AGG - tig0029609:8612-8631 Msa1442020:intron 25.0%
!! TATTTACTAGTTTCGTTTCA+GGG - tig0029609:8613-8632 Msa1442020:intron 25.0%
!!! GATACTTTGTTTGTTAGTTT+TGG - tig0029609:9009-9028 Msa1442020:intron 25.0%
! AATTATATTAACGGCCTATT+TGG + tig0029609:9128-9147 None:intergenic 25.0%
! AATCATGAAAGTTTCTTGAA+TGG - tig0029609:9149-9168 Msa1442020:CDS 25.0%
!!! TTGAATGGTTTTTGTTTTAC+AGG - tig0029609:9164-9183 Msa1442020:CDS 25.0%
! AAAGAAAGAAAAAAATGGCA+AGG + tig0029609:9392-9411 None:intergenic 25.0%
! GAGAATGAAATAGATATACA+AGG + tig0029609:9606-9625 None:intergenic 25.0%
!! CCAAAGTATAAAAATGGATT+TGG + tig0029609:9688-9707 None:intergenic 25.0%
!!! CCAAATCCATTTTTATACTT+TGG - tig0029609:9685-9704 Msa1442020:intron 25.0%
! CAAACTCCAAAGTATAAAAA+TGG + tig0029609:9694-9713 None:intergenic 25.0%
!!! CATTTTTATACTTTGGAGTT+TGG - tig0029609:9692-9711 Msa1442020:intron 25.0%
!!! TTGTTATTTTCTAATTGTCC+AGG - tig0029609:9833-9852 Msa1442020:intron 25.0%
! ATAGTTGAACGAAATATCTT+AGG + tig0029609:10096-10115 None:intergenic 25.0%
! CAAAGAGATCTACAAAAATT+CGG + tig0029609:10157-10176 None:intergenic 25.0%
! ATGAACATTACCTGATTAAT+GGG + tig0029609:10402-10421 None:intergenic 25.0%
!!! TCAAGTATTTTTGAGTACTA+TGG - tig0029609:10650-10669 Msa1442020:intron 25.0%
!!! TTTGAGTACTATGGTTTTAA+CGG - tig0029609:10659-10678 Msa1442020:intron 25.0%
! GGTATTTAACAAAATAACAG+AGG + tig0029609:10830-10849 None:intergenic 25.0%
! GTCATGTAAAGAAATTATAG+GGG - tig0029609:11026-11045 Msa1442020:intron 25.0%
! ATATGCATTTAGAGAAATTG+TGG - tig0029609:11332-11351 Msa1442020:CDS 25.0%
! TATGCATTTAGAGAAATTGT+GGG - tig0029609:11333-11352 Msa1442020:CDS 25.0%
! TCGAATTCAATCACATAATT+AGG + tig0029609:11473-11492 None:intergenic 25.0%
! CAATATTACACATATTATGG+TGG + tig0029609:11520-11539 None:intergenic 25.0%
! CACCATAATATGTGTAATAT+TGG - tig0029609:11518-11537 Msa1442020:CDS 25.0%
! GTCCAATATTACACATATTA+TGG + tig0029609:11523-11542 None:intergenic 25.0%
!! GAAGTACATTAATTTGGAAA+TGG + tig0029609:11545-11564 None:intergenic 25.0%
! ACAAACTATGAAAGTCAAAA+GGG - tig0029609:11728-11747 Msa1442020:intron 25.0%
! TAAAAAAGAATTGATGCATG+TGG + tig0029609:11773-11792 None:intergenic 25.0%
!!! TCAATTCTTTTTTATTGGGA+TGG - tig0029609:11779-11798 Msa1442020:intron 25.0%
! AACAAATCAATCTGAAGATA+TGG + tig0029609:11844-11863 None:intergenic 25.0%
! TTGTTTGTAAATAGATCAGT+TGG - tig0029609:11859-11878 Msa1442020:intron 25.0%
!!! CATGGTACTTGATATTTTAA+TGG + tig0029609:12112-12131 None:intergenic 25.0%
! TTAGAAATGAGGTTGTAAAT+AGG - tig0029609:12184-12203 Msa1442020:intron 25.0%
! TAAATAGGAGAATAGAATTG+AGG - tig0029609:12199-12218 Msa1442020:intron 25.0%
! AACAGAAAAATGAGAAGAAT+AGG + tig0029609:12332-12351 None:intergenic 25.0%
!! TTTTTCTTTCTCTTGTATTC+TGG - tig0029609:12358-12377 Msa1442020:CDS 25.0%
! ATACATAGAAAGACATATTC+TGG - tig0029609:12392-12411 Msa1442020:intron 25.0%
!!! AAATATTAAGATTGGCCTTT+TGG - tig0029609:12512-12531 Msa1442020:intron 25.0%
!!! AATATTAAGATTGGCCTTTT+GGG - tig0029609:12513-12532 Msa1442020:intron 25.0%
!!! TTTTTATTTAATCTGTGGTG+AGG - tig0029609:12701-12720 Msa1442020:intron 25.0%
!!! TTTTATTTAATCTGTGGTGA+GGG - tig0029609:12702-12721 Msa1442020:intron 25.0%
! GTTAAGTGAAAATGTATAAC+TGG - tig0029609:12724-12743 Msa1442020:intron 25.0%
! AAGATACTACATAAGGATTA+AGG + tig0029609:12805-12824 None:intergenic 25.0%
!! ATTTTGCACAAAACCTTTTT+AGG + tig0029609:13281-13300 None:intergenic 25.0%
! AAAAGGTAGAATGAGATTAT+TGG + tig0029609:13885-13904 None:intergenic 25.0%
!! TTCTACCTTTTGTTAAATCA+AGG - tig0029609:13894-13913 Msa1442020:CDS 25.0%
!! CACCAAATCTTTTTGAATTT+TGG - tig0029609:13997-14016 Msa1442020:intron 25.0%
! TGCCAAAATTCAAAAAGATT+TGG + tig0029609:14002-14021 None:intergenic 25.0%
!!! AATCTTTTTGAATTTTGGCA+AGG - tig0029609:14002-14021 Msa1442020:intron 25.0%
! AACAAACAAGCTATCATAAA+CGG + tig0029609:14064-14083 None:intergenic 25.0%
! TTTAATTAACTGAATATGCG+GGG + tig0029609:14295-14314 None:intergenic 25.0%
! GTTTAATTAACTGAATATGC+GGG + tig0029609:14296-14315 None:intergenic 25.0%
! CAGTTAATTAAACAAGTAGA+AGG - tig0029609:14303-14322 Msa1442020:intron 25.0%
! GTTAATTAAACAAGTAGAAG+GGG - tig0029609:14305-14324 Msa1442020:intron 25.0%
! TTAATTAAACAAGTAGAAGG+GGG - tig0029609:14306-14325 Msa1442020:intron 25.0%
! AACATTAAGAAAGACTAATG+GGG + tig0029609:14378-14397 None:intergenic 25.0%
! CAACATTAAGAAAGACTAAT+GGG + tig0029609:14379-14398 None:intergenic 25.0%
!!! ATTTCAAATGTTCTAAGGAA+AGG + tig0029609:14463-14482 None:intergenic 25.0%
!! ACATTTGAAATCCTAGTTAA+TGG - tig0029609:14472-14491 Msa1442020:CDS 25.0%
!! AAGTTGGGTAAATTTGTTGA+CGG - tig0029609:8282-8301 Msa1442020:three_prime_UTR 30.0%
! ATTTGTTGACGGATAAGAAA+AGG - tig0029609:8293-8312 Msa1442020:three_prime_UTR 30.0%
!! ATTGGTAATGTTGTTGTATG+GGG + tig0029609:8458-8477 None:intergenic 30.0%
!! GAATTGGTAATGTTGTTGTA+TGG + tig0029609:8460-8479 None:intergenic 30.0%
! ATGAATGAGTGATAGTGAAT+TGG + tig0029609:8476-8495 None:intergenic 30.0%
GTAGAAAATGATCGAATTGT+AGG + tig0029609:8652-8671 None:intergenic 30.0%
TTTAGATGAAGAAGTGATTG+TGG + tig0029609:8674-8693 None:intergenic 30.0%
AGAATTAACAAACCATGAGT+TGG + tig0029609:8798-8817 None:intergenic 30.0%
! CTCTTTCCATTTTCAATTTC+AGG - tig0029609:8874-8893 Msa1442020:intron 30.0%
CCAATTCCTGAAATTGAAAA+TGG + tig0029609:8883-8902 None:intergenic 30.0%
! CCATTTTCAATTTCAGGAAT+TGG - tig0029609:8880-8899 Msa1442020:intron 30.0%
!! GAACAAAAGTACCTCATATA+TGG + tig0029609:8927-8946 None:intergenic 30.0%
!!! GTTTGTTAGTTTTGGAGTAT+CGG - tig0029609:9017-9036 Msa1442020:intron 30.0%
!!! TTTGTTAGTTTTGGAGTATC+GGG - tig0029609:9018-9037 Msa1442020:intron 30.0%
TCAAATGAGACAATCCAAAT+AGG - tig0029609:9111-9130 Msa1442020:CDS 30.0%
! TGTTTTACAGGTTTACAAAC+CGG - tig0029609:9176-9195 Msa1442020:intron 30.0%
AAAAAATGGCAAGGTGATAT+AGG + tig0029609:9383-9402 None:intergenic 30.0%
! CTTTTCTTTTAATGAGTAGC+TGG - tig0029609:9408-9427 Msa1442020:CDS 30.0%
ATGAAATGAGAATCCAAACA+TGG + tig0029609:9549-9568 None:intergenic 30.0%
ATGTTTGGATTCTCATTTCA+TGG - tig0029609:9548-9567 Msa1442020:CDS 30.0%
CTATGTTCATAATTGTAACC+AGG + tig0029609:9644-9663 None:intergenic 30.0%
CTTTGGATCAAATCATCAAA+GGG + tig0029609:9872-9891 None:intergenic 30.0%
TCTTTGGATCAAATCATCAA+AGG + tig0029609:9873-9892 None:intergenic 30.0%
ATATCTACAGAGACTATAAC+CGG + tig0029609:9941-9960 None:intergenic 30.0%
AGGAATTAAACCTGATATGT+TGG - tig0029609:10003-10022 Msa1442020:intron 30.0%
CAAAAATTCGGTATATCAGT+GGG + tig0029609:10145-10164 None:intergenic 30.0%
ACAAAAATTCGGTATATCAG+TGG + tig0029609:10146-10165 None:intergenic 30.0%
! AACTTCTTTGCACAGAATTT+TGG + tig0029609:10186-10205 None:intergenic 30.0%
AAATTCTGTGCAAAGAAGTT+TGG - tig0029609:10186-10205 Msa1442020:intron 30.0%
! TTATACTTTTCAGCAATAGC+AGG + tig0029609:10249-10268 None:intergenic 30.0%
TGAACATTACCTGATTAATG+GGG + tig0029609:10401-10420 None:intergenic 30.0%
CATGAACATTACCTGATTAA+TGG + tig0029609:10403-10422 None:intergenic 30.0%
!!! TCAAGTATTTTTGAGTGCTA+TGG - tig0029609:10514-10533 Msa1442020:intron 30.0%
GTATAGTGATAGATCACTAT+TGG - tig0029609:10877-10896 Msa1442020:intron 30.0%
! GATCACTATTGGTGTATTTT+AGG - tig0029609:10888-10907 Msa1442020:intron 30.0%
!! AGATAGTTATGTTTTTGCTG+TGG - tig0029609:10969-10988 Msa1442020:intron 30.0%
GACACACAATTAGGAAAATA+TGG + tig0029609:11176-11195 None:intergenic 30.0%
GGTAGTTATTTGAGTGATTA+TGG - tig0029609:11288-11307 Msa1442020:intron 30.0%
ATGCATTTAGAGAAATTGTG+GGG - tig0029609:11334-11353 Msa1442020:CDS 30.0%
!! AACAATGAAGGTTGATGTTA+GGG - tig0029609:11388-11407 Msa1442020:CDS 30.0%
CCAGTTGAAGTACATTAATT+TGG + tig0029609:11551-11570 None:intergenic 30.0%
CCAAATTAATGTACTTCAAC+TGG - tig0029609:11548-11567 Msa1442020:intron 30.0%
CTGTACAAAACAATTACAGT+AGG + tig0029609:11704-11723 None:intergenic 30.0%
!! CTACTGTAATTGTTTTGTAC+AGG - tig0029609:11702-11721 Msa1442020:intron 30.0%
CACAAACTATGAAAGTCAAA+AGG - tig0029609:11727-11746 Msa1442020:intron 30.0%
! GGCATTAATTTTTCATGCAA+AGG - tig0029609:11880-11899 Msa1442020:intron 30.0%
! TATCCTAGGAAAGTACATTA+TGG + tig0029609:11947-11966 None:intergenic 30.0%
TTATCCTCGATTTATATCCT+AGG + tig0029609:11961-11980 None:intergenic 30.0%
! TTAGTGGTTAGTTAGAAATG+AGG - tig0029609:12173-12192 Msa1442020:intron 30.0%
AAAGACATATTCTGGTATTG+TGG - tig0029609:12400-12419 Msa1442020:intron 30.0%
AAGACATATTCTGGTATTGT+GGG - tig0029609:12401-12420 Msa1442020:intron 30.0%
! ATGACCTTTAACTTAATCCA+TGG - tig0029609:12467-12486 Msa1442020:intron 30.0%
! TGACCTTTAACTTAATCCAT+GGG - tig0029609:12468-12487 Msa1442020:intron 30.0%
ATCTTAGAAAAATGCCCAAA+AGG + tig0029609:12530-12549 None:intergenic 30.0%
!!! TTGGGCATTTTTCTAAGATT+CGG - tig0029609:12531-12550 Msa1442020:intron 30.0%
!!! CATTTTTCTAAGATTCGGTT+GGG - tig0029609:12536-12555 Msa1442020:intron 30.0%
!!! ATTTTTCTAAGATTCGGTTG+GGG - tig0029609:12537-12556 Msa1442020:intron 30.0%
ATGCAACGAAATAATAAACC+CGG - tig0029609:12775-12794 Msa1442020:CDS 30.0%
AACACACACTTTCTTCTATT+GGG + tig0029609:12936-12955 None:intergenic 30.0%
TAACACACACTTTCTTCTAT+TGG + tig0029609:12937-12956 None:intergenic 30.0%
!!! CATTTGCTGACTTGTTTTAT+TGG - tig0029609:13139-13158 Msa1442020:CDS 30.0%
!!! TTTTTTTTTCTAGGTACGTG+TGG - tig0029609:13506-13525 Msa1442020:intron 30.0%
TGGAACAAAAATATGCTGAT+GGG - tig0029609:13752-13771 Msa1442020:intron 30.0%
GCTTTCCTTGATTTAACAAA+AGG + tig0029609:13902-13921 None:intergenic 30.0%
TTCTGCAAGCAGAAAATATA+TGG + tig0029609:13935-13954 None:intergenic 30.0%
ACAAACAAGCTATCATAAAC+GGG + tig0029609:14063-14082 None:intergenic 30.0%
CATATATAGATCAACTTTGC+TGG + tig0029609:14203-14222 None:intergenic 30.0%
GCAACATTAAGAAAGACTAA+TGG + tig0029609:14380-14399 None:intergenic 30.0%
CTAGGATTTCAAATGTTCTA+AGG + tig0029609:14468-14487 None:intergenic 30.0%
TGAAATCCTAGTTAATGGAA+AGG - tig0029609:14477-14496 Msa1442020:CDS 30.0%
TATATGCATGTCTAATTGAC+AGG - tig0029609:14561-14580 Msa1442020:intron 30.0%
!!! TTTTTTCCATCTATCTCATG+GGG + tig0029609:14599-14618 None:intergenic 30.0%
!!! CTTTTTTCCATCTATCTCAT+GGG + tig0029609:14600-14619 None:intergenic 30.0%
AGATAGATGGAAAAAAGCTA+TGG - tig0029609:14603-14622 Msa1442020:CDS 30.0%
!! ATACAATTTTGACGTGTTTC+CGG + tig0029609:14679-14698 None:intergenic 30.0%
CTGGTAGTAAAATTGAAGTG+TGG - tig0029609:8344-8363 Msa1442020:three_prime_UTR 35.0%
ACGGAGAAGAATTGAAGAAA+GGG + tig0029609:8538-8557 None:intergenic 35.0%
TACGGAGAAGAATTGAAGAA+AGG + tig0029609:8539-8558 None:intergenic 35.0%
TGAGATTGATGAAACTCTCA+TGG - tig0029609:8750-8769 Msa1442020:intron 35.0%
GAGATTGATGAAACTCTCAT+GGG - tig0029609:8751-8770 Msa1442020:intron 35.0%
TTTCAATTTCAGGAATTGGC+TGG - tig0029609:8884-8903 Msa1442020:intron 35.0%
! GTTTTACAGGTTTACAAACC+GGG - tig0029609:9177-9196 Msa1442020:intron 35.0%
AGTCGTGTTCTTACTATATG+TGG - tig0029609:9207-9226 Msa1442020:intron 35.0%
TCACTTTGGTTATAAGCCTT+TGG - tig0029609:9278-9297 Msa1442020:intron 35.0%
TACTAGAATGTCAAAGTCCT+TGG + tig0029609:9522-9541 None:intergenic 35.0%
ATTCTAGTAGATGCCATGTT+TGG - tig0029609:9533-9552 Msa1442020:CDS 35.0%
GTAACCAGGATTCATAACAT+TGG + tig0029609:9630-9649 None:intergenic 35.0%
! GTTTTGTCTGTTATCAACAC+AGG - tig0029609:9747-9766 Msa1442020:intron 35.0%
TCAAATTGGCCAAAAAAGAC+CGG - tig0029609:9919-9938 Msa1442020:intron 35.0%
!!! AGACTATAACCGGTCTTTTT+TGG + tig0029609:9931-9950 None:intergenic 35.0%
TCTCTGTAGATATTCCTTCT+GGG - tig0029609:9948-9967 Msa1442020:intron 35.0%
TGGATATGTACCAACATATC+AGG + tig0029609:10016-10035 None:intergenic 35.0%
TGATATGTTGGTACATATCC+AGG - tig0029609:10015-10034 Msa1442020:intron 35.0%
GATATGTTGGTACATATCCA+GGG - tig0029609:10016-10035 Msa1442020:intron 35.0%
AATGAAACAGATATATGCCC+TGG + tig0029609:10036-10055 None:intergenic 35.0%
CAAATCTACCTCCTAAAAAG+TGG + tig0029609:10221-10240 None:intergenic 35.0%
!! AGAGCTGAAATATCGATTTG+AGG + tig0029609:10327-10346 None:intergenic 35.0%
CAAGTCATTAACTACCAACA+GGG + tig0029609:10468-10487 None:intergenic 35.0%
TCAAGTCATTAACTACCAAC+AGG + tig0029609:10469-10488 None:intergenic 35.0%
!!! TGAGTGCTATGGTTTTAATC+AGG - tig0029609:10525-10544 Msa1442020:intron 35.0%
CAAGTCATTATCTACCAACA+GGG + tig0029609:10604-10623 None:intergenic 35.0%
TCAAGTCATTATCTACCAAC+AGG + tig0029609:10605-10624 None:intergenic 35.0%
ACGCATCATCAAACCATTTA+CGG + tig0029609:10733-10752 None:intergenic 35.0%
!! TAAATGGTTTGATGATGCGT+TGG - tig0029609:10733-10752 Msa1442020:intron 35.0%
TTTGAAGGAACCAAATGCTA+TGG - tig0029609:10763-10782 Msa1442020:intron 35.0%
AATAACAGAGGCTGATCTTA+CGG + tig0029609:10818-10837 None:intergenic 35.0%
CTAGTGATCTTGAAGACAAA+AGG + tig0029609:10851-10870 None:intergenic 35.0%
! CTTTTGTCTTCAAGATCACT+AGG - tig0029609:10849-10868 Msa1442020:intron 35.0%
CAATAACAAACCAGATCACA+AGG + tig0029609:11110-11129 None:intergenic 35.0%
TAATTAGACCTTGCTAGACT+GGG + tig0029609:11228-11247 None:intergenic 35.0%
ATAATTAGACCTTGCTAGAC+TGG + tig0029609:11229-11248 None:intergenic 35.0%
!! TTGTATGATGGGCATGTATT+TGG - tig0029609:11262-11281 Msa1442020:intron 35.0%
TGCATTTAGAGAAATTGTGG+GGG - tig0029609:11335-11354 Msa1442020:CDS 35.0%
!! GAACAATGAAGGTTGATGTT+AGG - tig0029609:11387-11406 Msa1442020:CDS 35.0%
!! ACAATGAAGGTTGATGTTAG+GGG - tig0029609:11389-11408 Msa1442020:CDS 35.0%
! ATTGCTAAAAGGCTTTGACA+AGG - tig0029609:11592-11611 Msa1442020:intron 35.0%
TGAAATCAATAGTCACCTGT+CGG + tig0029609:11811-11830 None:intergenic 35.0%
ATGCCATAATGTACTTTCCT+AGG - tig0029609:11941-11960 Msa1442020:intron 35.0%
CTTTCCTAGGATATAAATCG+AGG - tig0029609:11954-11973 Msa1442020:intron 35.0%
GAAGAGAATGTTCAAGATTG+TGG - tig0029609:12008-12027 Msa1442020:intron 35.0%
TTCTCTCAGATGATGTAACT+TGG - tig0029609:12040-12059 Msa1442020:intron 35.0%
TCTCTCAGATGATGTAACTT+GGG - tig0029609:12041-12060 Msa1442020:intron 35.0%
AGATGATGTAACTTGGGATT+TGG - tig0029609:12047-12066 Msa1442020:intron 35.0%
GCATTCTTGTATCACTTGTT+TGG + tig0029609:12147-12166 None:intergenic 35.0%
TAGGAGAATAGAATTGAGGT+AGG - tig0029609:12203-12222 Msa1442020:intron 35.0%
AGGAGAATAGAATTGAGGTA+GGG - tig0029609:12204-12223 Msa1442020:intron 35.0%
TGATAAAATACCACACACCT+AGG + tig0029609:12281-12300 None:intergenic 35.0%
GTCTTTCTATGTATTAGGAC+TGG + tig0029609:12386-12405 None:intergenic 35.0%
! GACCTTTAACTTAATCCATG+GGG - tig0029609:12469-12488 Msa1442020:intron 35.0%
! TTCCCCATGGATTAAGTTAA+AGG + tig0029609:12474-12493 None:intergenic 35.0%
!!! GCATTTTTCTAAGATTCGGT+TGG - tig0029609:12535-12554 Msa1442020:intron 35.0%
ACATAAGGATTAAGGTCAAC+CGG + tig0029609:12797-12816 None:intergenic 35.0%
TCTTAAAGTGGAATAGAGCT+TGG - tig0029609:12883-12902 Msa1442020:CDS 35.0%
ACACTTTCTTCTATTGGGTA+TGG + tig0029609:12931-12950 None:intergenic 35.0%
AGCTAGATGACCTATATCTT+AGG - tig0029609:13030-13049 Msa1442020:intron 35.0%
ACATGCACTTGATTTCATCT+TGG + tig0029609:13077-13096 None:intergenic 35.0%
!!! TATGTCACTTTGCTTTTCAG+AGG - tig0029609:13405-13424 Msa1442020:intron 35.0%
GTGAATCAACACTAAATTGC+TGG + tig0029609:13476-13495 None:intergenic 35.0%
TGTTCAGAAAGTTTCTGATG+AGG - tig0029609:13536-13555 Msa1442020:intron 35.0%
CTGGAACAAAAATATGCTGA+TGG - tig0029609:13751-13770 Msa1442020:intron 35.0%
! TGATTAGCTCTTGTTGCATT+TGG - tig0029609:13859-13878 Msa1442020:CDS 35.0%
TGATCCCTAAACCTAAAAAC+TGG - tig0029609:13958-13977 Msa1442020:intron 35.0%
GATCCCTAAACCTAAAAACT+GGG - tig0029609:13959-13978 Msa1442020:intron 35.0%
ATCCCTAAACCTAAAAACTG+GGG - tig0029609:13960-13979 Msa1442020:intron 35.0%
AAACAAGCTATCATAAACGG+GGG + tig0029609:14061-14080 None:intergenic 35.0%
CAAACAAGCTATCATAAACG+GGG + tig0029609:14062-14081 None:intergenic 35.0%
! CATTTTTCGCTACACAGTTT+AGG - tig0029609:14157-14176 Msa1442020:intron 35.0%
GTTACTCCTTTCCATTAACT+AGG + tig0029609:14486-14505 None:intergenic 35.0%
AAGGAAAATTTACCTCACAC+GGG + tig0029609:14522-14541 None:intergenic 35.0%
CAAGGAAAATTTACCTCACA+CGG + tig0029609:14523-14542 None:intergenic 35.0%
!!! GCTTTTTTCCATCTATCTCA+TGG + tig0029609:14601-14620 None:intergenic 35.0%
AGATGGAAAAAAGCTATGGA+AGG - tig0029609:14607-14626 Msa1442020:CDS 35.0%
CTCATCACACTGAATTATCA+GGG + tig0029609:14647-14666 None:intergenic 35.0%
ACTCATCACACTGAATTATC+AGG + tig0029609:14648-14667 None:intergenic 35.0%
AATGCGTTGCATTATTCCAA+TGG + tig0029609:14762-14781 None:intergenic 35.0%
TGAAGAGATGCGTTCATTGA+TGG - tig0029609:8390-8409 Msa1442020:three_prime_UTR 40.0%
GAGAAGAATTGAAGAAAGGG+AGG + tig0029609:8535-8554 None:intergenic 40.0%
! TTTGAGGTAAGTGACTGAGT+CGG + tig0029609:8716-8735 None:intergenic 40.0%
!! CAACAGCTTCTTGTTGTTTG+AGG + tig0029609:8732-8751 None:intergenic 40.0%
!! ACACGTATCACGGAAGTATT+TGG + tig0029609:8975-8994 None:intergenic 40.0%
TGTGACATTGACACGTATCA+CGG + tig0029609:8985-9004 None:intergenic 40.0%
!! AGTATCGGGCTTTTTAGAGA+TGG - tig0029609:9032-9051 Msa1442020:intron 40.0%
AGCAAGCAATTGTGAAAGAG+TGG + tig0029609:9076-9095 None:intergenic 40.0%
GTTCTTACTATATGTGGTCC+TGG - tig0029609:9213-9232 Msa1442020:intron 40.0%
ATATGTGGTCCTGGTAACAA+TGG - tig0029609:9222-9241 Msa1442020:intron 40.0%
GCTTATAACCAAAGTGATGC+AGG + tig0029609:9275-9294 None:intergenic 40.0%
GTAACTAACCCAGCATATAG+AGG + tig0029609:9330-9349 None:intergenic 40.0%
!! ATATGCTGGGTTAGTTACTC+AGG - tig0029609:9332-9351 Msa1442020:intron 40.0%
ATTGTCGATCCCTTTCTTGT+CGG - tig0029609:9472-9491 Msa1442020:intron 40.0%
TCTACCATCAGATTTCTCCA+AGG - tig0029609:9502-9521 Msa1442020:intron 40.0%
AAGTCCTTGGAGAAATCTGA+TGG + tig0029609:9509-9528 None:intergenic 40.0%
CTCACCAATGTTATGAATCC+TGG - tig0029609:9623-9642 Msa1442020:intron 40.0%
TGGATCAAATCATCAAAGGG+AGG + tig0029609:9869-9888 None:intergenic 40.0%
GTCTCTGTAGATATTCCTTC+TGG - tig0029609:9947-9966 Msa1442020:intron 40.0%
TTCTGTGCAAAGAAGTTTGG+CGG - tig0029609:10189-10208 Msa1442020:intron 40.0%
TACCTCCTAAAAAGTGGTGA+GGG + tig0029609:10215-10234 None:intergenic 40.0%
! ACTTTTCAGCAATAGCAGGT+GGG + tig0029609:10245-10264 None:intergenic 40.0%
! TACTTTTCAGCAATAGCAGG+TGG + tig0029609:10246-10265 None:intergenic 40.0%
CTTATACTTCCACCATATCC+TGG - tig0029609:10270-10289 Msa1442020:intron 40.0%
TTTGAGGAGGCTTTCCAATT+CGG + tig0029609:10311-10330 None:intergenic 40.0%
!! GCTGAAATATCGATTTGAGG+AGG + tig0029609:10324-10343 None:intergenic 40.0%
TCCAGAATTTCTTGAAGACC+AGG - tig0029609:10365-10384 Msa1442020:intron 40.0%
! ACCTGGTCTTCAAGAAATTC+TGG + tig0029609:10369-10388 None:intergenic 40.0%
AGAATTTCTTGAAGACCAGG+TGG - tig0029609:10368-10387 Msa1442020:intron 40.0%
ATTAACTACCAACAGGGAAG+AGG + tig0029609:10462-10481 None:intergenic 40.0%
ATTATCTACCAACAGGGAAG+AGG + tig0029609:10598-10617 None:intergenic 40.0%
TCAAACCATTTACGGAACTG+CGG + tig0029609:10725-10744 None:intergenic 40.0%
ATCCTTTCCTACAGTTGACA+AGG + tig0029609:10789-10808 None:intergenic 40.0%
TTGTCAACTGTAGGAAAGGA+TGG - tig0029609:10788-10807 Msa1442020:intron 40.0%
CTAATCAGGTCTACTAGACT+AGG + tig0029609:10929-10948 None:intergenic 40.0%
GTTTGTGTAGTCTTTGAACG+AGG - tig0029609:11064-11083 Msa1442020:intron 40.0%
AATAGCGCAGACACACAATT+AGG + tig0029609:11185-11204 None:intergenic 40.0%
TAATTGTGTGTCTGCGCTAT+TGG - tig0029609:11184-11203 Msa1442020:intron 40.0%
GTGCTGTGTTTGAACAATGA+AGG - tig0029609:11376-11395 Msa1442020:CDS 40.0%
CAATAATACACCAGCACACA+GGG + tig0029609:11419-11438 None:intergenic 40.0%
ACAATAATACACCAGCACAC+AGG + tig0029609:11420-11439 None:intergenic 40.0%
TCACGGATCGTATTGCTAAA+AGG - tig0029609:11581-11600 Msa1442020:intron 40.0%
! CTAAAAGGCTTTGACAAGGA+TGG - tig0029609:11596-11615 Msa1442020:intron 40.0%
! TTGACAAGGATGGATTTGTG+TGG - tig0029609:11606-11625 Msa1442020:intron 40.0%
TCTTGTATCACTTGTTTGGC+TGG + tig0029609:12143-12162 None:intergenic 40.0%
ACAAGAATGCTCTCTGTTAG+TGG - tig0029609:12157-12176 Msa1442020:intron 40.0%
AGAATAGAATTGAGGTAGGG+CGG - tig0029609:12207-12226 Msa1442020:intron 40.0%
! ACTGGTTCCTTGAATTACCT+AGG - tig0029609:12261-12280 Msa1442020:intron 40.0%
GTTACCAAATCAAGACCTTC+AGG + tig0029609:12564-12583 None:intergenic 40.0%
CATAAGGATTAAGGTCAACC+GGG + tig0029609:12796-12815 None:intergenic 40.0%
GACCTATATCTTAGGACAAC+TGG - tig0029609:13038-13057 Msa1442020:intron 40.0%
TGCCAGTTGTCCTAAGATAT+AGG + tig0029609:13043-13062 None:intergenic 40.0%
TTATTGTGACCTCACAAAGC+TGG - tig0029609:13342-13361 Msa1442020:intron 40.0%
! TTACATTAGCCAGCTTTGTG+AGG + tig0029609:13354-13373 None:intergenic 40.0%
!!! TTTTTTCTAGGTACGTGTGG+AGG - tig0029609:13509-13528 Msa1442020:intron 40.0%
! TTTTTCTAGGTACGTGTGGA+GGG - tig0029609:13510-13529 Msa1442020:intron 40.0%
CATTAGAGTTCTGTAGTGAC+TGG - tig0029609:13697-13716 Msa1442020:intron 40.0%
!!! CTCCCCAGTTTTTAGGTTTA+GGG + tig0029609:13965-13984 None:intergenic 40.0%
GTTGTCATACACACACAGTT+TGG + tig0029609:14118-14137 None:intergenic 40.0%
GTGTGTGTATGACAACTTAC+AGG - tig0029609:14122-14141 Msa1442020:intron 40.0%
!!! AGTCTGACAGGGAACTTTTT+TGG + tig0029609:14337-14356 None:intergenic 40.0%
GATGTAGCAAAAGTCTGACA+GGG + tig0029609:14348-14367 None:intergenic 40.0%
AGATGTAGCAAAAGTCTGAC+AGG + tig0029609:14349-14368 None:intergenic 40.0%
TCACACGGGTAAACAACAAA+AGG + tig0029609:14508-14527 None:intergenic 40.0%
!!! TTTTGTTGTTTACCCGTGTG+AGG - tig0029609:14507-14526 Msa1442020:intron 40.0%
AAAAGCTATGGAAGGTTGAG+CGG - tig0029609:14615-14634 Msa1442020:CDS 40.0%
!! AATTTTGACGTGTTTCCGGT+GGG + tig0029609:14675-14694 None:intergenic 40.0%
GATTGAGATTGCAGTTCCAT+TGG - tig0029609:14743-14762 Msa1442020:five_prime_UTR 40.0%
GACCTGATTCTGCTTAGAAA+TGG - tig0029609:14856-14875 Msa1442020:five_prime_UTR 40.0%
CACCATTTCTAAGCAGAATC+AGG + tig0029609:14861-14880 None:intergenic 40.0%
GCTTAGAAATGGTGAGTATG+CGG - tig0029609:14867-14886 Msa1442020:five_prime_UTR 40.0%
CGGATAAGAAAAGGCCAACA+AGG - tig0029609:8302-8321 Msa1442020:three_prime_UTR 45.0%
CGTGTTCTTGATTGCCTTGT+TGG + tig0029609:8319-8338 None:intergenic 45.0%
CAATCAAGAACACGCGATTC+TGG - tig0029609:8325-8344 Msa1442020:three_prime_UTR 45.0%
! CGTTTCAGGGTATTCTTCTC+AGG - tig0029609:8626-8645 Msa1442020:intron 45.0%
GTCGGAATCGAAATTGGACA+TGG + tig0029609:8698-8717 None:intergenic 45.0%
GACTGAGTCGGAATCGAAAT+TGG + tig0029609:8704-8723 None:intergenic 45.0%
CGTCGCTACTTCCATATATG+AGG - tig0029609:8913-8932 Msa1442020:intron 45.0%
!! TAACAATGGTGGTGATGGTC+TGG - tig0029609:9236-9255 Msa1442020:intron 45.0%
AACCAAAGTGATGCAGGTGA+CGG + tig0029609:9269-9288 None:intergenic 45.0%
AACCCAGCATATAGAGGCTT+GGG + tig0029609:9324-9343 None:intergenic 45.0%
TAACCCAGCATATAGAGGCT+TGG + tig0029609:9325-9344 None:intergenic 45.0%
GATCTTCCACCGACAAGAAA+GGG + tig0029609:9484-9503 None:intergenic 45.0%
AGATCTTCCACCGACAAGAA+AGG + tig0029609:9485-9504 None:intergenic 45.0%
CTAATTGTCCAGGTTCTCCA+AGG - tig0029609:9843-9862 Msa1442020:intron 45.0%
AAATCATCAAAGGGAGGCCT+TGG + tig0029609:9863-9882 None:intergenic 45.0%
CTGTAGATATTCCTTCTGGG+TGG - tig0029609:9951-9970 Msa1442020:intron 45.0%
GTTGAAGAGGGAGATGTTGA+TGG - tig0029609:9977-9996 Msa1442020:intron 45.0%
!! CTTTGCACAGAATTTTGGCG+CGG + tig0029609:10181-10200 None:intergenic 45.0%
CTACCTCCTAAAAAGTGGTG+AGG + tig0029609:10216-10235 None:intergenic 45.0%
ATGGATGTTCCAGGATATGG+TGG + tig0029609:10282-10301 None:intergenic 45.0%
CACATGGATGTTCCAGGATA+TGG + tig0029609:10285-10304 None:intergenic 45.0%
ACATCCATGTGTGTCCGAAT+TGG - tig0029609:10294-10313 Msa1442020:intron 45.0%
CTTTCCAATTCGGACACACA+TGG + tig0029609:10301-10320 None:intergenic 45.0%
ATTTCTTGAAGACCAGGTGG+AGG - tig0029609:10371-10390 Msa1442020:intron 45.0%
ATTACCCGCAGTTCCGTAAA+TGG - tig0029609:10717-10736 Msa1442020:intron 45.0%
CAAACCATTTACGGAACTGC+GGG + tig0029609:10724-10743 None:intergenic 45.0%
GTTGACAAGGCCATAGCATT+TGG + tig0029609:10776-10795 None:intergenic 45.0%
TGAACGAGGAAACTCCTTGT+AGG - tig0029609:11078-11097 Msa1442020:intron 45.0%
GAACGAGGAAACTCCTTGTA+GGG - tig0029609:11079-11098 Msa1442020:intron 45.0%
AACGAGGAAACTCCTTGTAG+GGG - tig0029609:11080-11099 Msa1442020:intron 45.0%
TAGTTGTACCCAGTCTAGCA+AGG - tig0029609:11217-11236 Msa1442020:intron 45.0%
! TGATGGGCATGTATTTGGTG+CGG - tig0029609:11267-11286 Msa1442020:intron 45.0%
TTGGGATGGTTTAAACCGAC+AGG - tig0029609:11793-11812 Msa1442020:intron 45.0%
!! AGGAGTATTGTGTCTTCTCC+AGG - tig0029609:11900-11919 Msa1442020:intron 45.0%
!! GGAGTATTGTGTCTTCTCCA+GGG - tig0029609:11901-11920 Msa1442020:intron 45.0%
GTTTGGCTGGACATATCTCA+TGG + tig0029609:12130-12149 None:intergenic 45.0%
CCACACACCTAGGTAATTCA+AGG + tig0029609:12271-12290 None:intergenic 45.0%
CCTTGAATTACCTAGGTGTG+TGG - tig0029609:12268-12287 Msa1442020:intron 45.0%
! TTTTCTAGGTACGTGTGGAG+GGG - tig0029609:13511-13530 Msa1442020:intron 45.0%
TATTTCCATAGCCGTCCTAG+AGG - tig0029609:13570-13589 Msa1442020:CDS 45.0%
! CAATCTGACTACCTCTAGGA+CGG + tig0029609:13584-13603 None:intergenic 45.0%
AGAGTTCTGTAGTGACTGGT+AGG - tig0029609:13701-13720 Msa1442020:intron 45.0%
TCTTCTTCTGTTACTCCCCT+TGG - tig0029609:13819-13838 Msa1442020:CDS 45.0%
TAATCAGATGTCCGAAGTCC+AGG + tig0029609:13845-13864 None:intergenic 45.0%
!!! CCTCCCCAGTTTTTAGGTTT+AGG + tig0029609:13966-13985 None:intergenic 45.0%
CCTAAACCTAAAAACTGGGG+AGG - tig0029609:13963-13982 Msa1442020:intron 45.0%
! CTGTATCCTCCCCAGTTTTT+AGG + tig0029609:13972-13991 None:intergenic 45.0%
CTAAAAACTGGGGAGGATAC+AGG - tig0029609:13970-13989 Msa1442020:intron 45.0%
AGAAATCTCGCTTGCATGAC+AGG - tig0029609:14027-14046 Msa1442020:intron 45.0%
TACGTTCCCCATGAGATAGA+TGG - tig0029609:14590-14609 Msa1442020:CDS 45.0%
!! ATTTTGACGTGTTTCCGGTG+GGG + tig0029609:14674-14693 None:intergenic 45.0%
!! CAATTTTGACGTGTTTCCGG+TGG + tig0029609:14676-14695 None:intergenic 45.0%
GAAACTCTCATGGGTCCTCT+TGG - tig0029609:8760-8779 Msa1442020:intron 50.0%
AGAACACGACTATACTCGCC+CGG + tig0029609:9198-9217 None:intergenic 50.0%
TGTGGTCCTGGTAACAATGG+TGG - tig0029609:9225-9244 Msa1442020:intron 50.0%
CCATCACCACCATTGTTACC+AGG + tig0029609:9234-9253 None:intergenic 50.0%
! CCTGGTAACAATGGTGGTGA+TGG - tig0029609:9231-9250 Msa1442020:intron 50.0%
ACCAAAGTGATGCAGGTGAC+GGG + tig0029609:9268-9287 None:intergenic 50.0%
! CGCTTTGGGTAACAGACCAA+AGG + tig0029609:9297-9316 None:intergenic 50.0%
ACCCAGCATATAGAGGCTTG+GGG + tig0029609:9323-9342 None:intergenic 50.0%
TCTTCAACATGCCACCCAGA+AGG + tig0029609:9965-9984 None:intergenic 50.0%
TTCTGGGTGGCATGTTGAAG+AGG - tig0029609:9964-9983 Msa1442020:intron 50.0%
TCTGGGTGGCATGTTGAAGA+GGG - tig0029609:9965-9984 Msa1442020:intron 50.0%
CTACCAACAGGGAAGAGGAA+GGG + tig0029609:10457-10476 None:intergenic 50.0%
ACTACCAACAGGGAAGAGGA+AGG + tig0029609:10458-10477 None:intergenic 50.0%
CTACCAACAGGGAAGAGGAA+GGG + tig0029609:10457-10476 None:intergenic 50.0%
TCTACCAACAGGGAAGAGGA+AGG + tig0029609:10594-10613 None:intergenic 50.0%
!! GCTATGGCCTTGTCAACTGT+AGG - tig0029609:10779-10798 Msa1442020:intron 50.0%
! GGCCTTGTCAACTGTAGGAA+AGG - tig0029609:10784-10803 Msa1442020:intron 50.0%
CAGGTCTACTAGACTAGGTC+TGG + tig0029609:10924-10943 None:intergenic 50.0%
ACGAGGAAACTCCTTGTAGG+GGG - tig0029609:11081-11100 Msa1442020:intron 50.0%
!! TGTGGGGGTGTCTCTTCTTA+CGG - tig0029609:11350-11369 Msa1442020:CDS 50.0%
GTCTTCTCCAGGGAAGCTAA+TGG - tig0029609:11911-11930 Msa1442020:intron 50.0%
TGCAGCAAGCTGCACATATG+AGG + tig0029609:12088-12107 None:intergenic 50.0%
AGAGGTGATAAGGTTCCCCA+TGG + tig0029609:12487-12506 None:intergenic 50.0%
GGGTCCTGAAGGTCTTGATT+TGG - tig0029609:12557-12576 Msa1442020:intron 50.0%
CGTCCTAGAGGTAGTCAGAT+TGG - tig0029609:13582-13601 Msa1442020:CDS 50.0%
GCTCCAATCTGACTACCTCT+AGG + tig0029609:13588-13607 None:intergenic 50.0%
TGGAGCAATAGTCAGCAAGC+AGG - tig0029609:13602-13621 Msa1442020:CDS 50.0%
TCACGAGCAGTACAAAGAGC+TGG - tig0029609:13732-13751 Msa1442020:intron 50.0%
AATCTCGCTTGCATGACAGG+TGG - tig0029609:14030-14049 Msa1442020:intron 50.0%
GTGTGATGAGTTTACCCCAC+CGG - tig0029609:14657-14676 Msa1442020:CDS 50.0%
!! CTTCAGCGTCGACCAACTCA+TGG - tig0029609:8783-8802 Msa1442020:intron 55.0%
!! CAATGGTGGTGATGGTCTGG+TGG - tig0029609:9239-9258 Msa1442020:intron 55.0%
ACCCCCAAGCCTCTATATGC+TGG - tig0029609:9318-9337 Msa1442020:intron 55.0%
CCCAGCATATAGAGGCTTGG+GGG + tig0029609:9322-9341 None:intergenic 55.0%
CCCCCAAGCCTCTATATGCT+GGG - tig0029609:9319-9338 Msa1442020:intron 55.0%
GTCGATCCCTTTCTTGTCGG+TGG - tig0029609:9475-9494 Msa1442020:intron 55.0%
!! GAGGGAGATGTTGATGGCAC+AGG - tig0029609:9983-10002 Msa1442020:intron 55.0%
!!! GGCCCTCACCACTTTTTAGG+AGG - tig0029609:10210-10229 Msa1442020:intron 55.0%
CGGACACACATGGATGTTCC+AGG + tig0029609:10291-10310 None:intergenic 55.0%
GGAGGCAGACCCCATTAATC+AGG - tig0029609:10389-10408 Msa1442020:intron 55.0%
TTGCCCTTCCTCTTCCCTGT+TGG - tig0029609:10451-10470 Msa1442020:intron 55.0%
TTGCCCTTCCTCTTCCCTGT+TGG - tig0029609:10451-10470 Msa1442020:intron 55.0%
!! TGCGTTGGCTGCGAGTTTGA+AGG - tig0029609:10748-10767 Msa1442020:intron 55.0%
CGAGGAAACTCCTTGTAGGG+GGG - tig0029609:11082-11101 Msa1442020:intron 55.0%
TCACAAGGTTCCCCCCTACA+AGG + tig0029609:11095-11114 None:intergenic 55.0%
TAGGGGGGAACCTTGTGATC+TGG - tig0029609:11097-11116 Msa1442020:intron 55.0%
TAGGGGTAAACCCTGTGTGC+TGG - tig0029609:11406-11425 Msa1442020:intron 55.0%
CAACTGGCTGCAGCTCATCA+CGG - tig0029609:11564-11583 Msa1442020:intron 55.0%
! GCTGTGACCATTAGCTTCCC+TGG + tig0029609:11921-11940 None:intergenic 55.0%
! AGATTCGGTTGGGGTCCTGA+AGG - tig0029609:12546-12565 Msa1442020:intron 55.0%
GTGCTAGCAACACACTCTCG+TGG + tig0029609:12974-12993 None:intergenic 55.0%
!! GACTACCTCTAGGACGGCTA+TGG + tig0029609:13578-13597 None:intergenic 55.0%
TTCTGTTACTCCCCTTGGCC+TGG - tig0029609:13824-13843 Msa1442020:CDS 55.0%
ATGTCCGAAGTCCAGGCCAA+GGG + tig0029609:13838-13857 None:intergenic 55.0%
GCTATGGAAGGTTGAGCGGT+TGG - tig0029609:14619-14638 Msa1442020:CDS 55.0%
TGGTCGACGCTGAAGCCAAG+AGG + tig0029609:8778-8797 None:intergenic 60.0%
GCCCGTCACCTGCATCACTT+TGG - tig0029609:9264-9283 Msa1442020:intron 60.0%
! GAGGCTTGGGGGTACGCTTT+GGG + tig0029609:9311-9330 None:intergenic 60.0%
! AGAGGCTTGGGGGTACGCTT+TGG + tig0029609:9312-9331 None:intergenic 60.0%
AAGGGAGGCCTTGGAGAACC+TGG + tig0029609:9854-9873 None:intergenic 60.0%
!!! GGCGGCCCTCACCACTTTTT+AGG - tig0029609:10207-10226 Msa1442020:intron 60.0%
TAATGGGGTCTGCCTCCACC+TGG + tig0029609:10386-10405 None:intergenic 60.0%
ACTCCCCTTGGCCTGGACTT+CGG - tig0029609:13831-13850 Msa1442020:CDS 60.0%
TGTCCGAAGTCCAGGCCAAG+GGG + tig0029609:13837-13856 None:intergenic 60.0%
GATGTCCGAAGTCCAGGCCA+AGG + tig0029609:13839-13858 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0029609 gene 8248 14890 8248 ID=Msa1442020;Name=Msa1442020
tig0029609 mRNA 8248 14890 8248 ID=Msa1442020-mRNA-1;Parent=Msa1442020;Name=Msa1442020-mRNA-1;_AED=0.16;_eAED=0.16;_QI=149|1|1|1|0.92|0.92|14|241|541
tig0029609 exon 8248 8555 8248 ID=Msa1442020-mRNA-1:exon:13183;Parent=Msa1442020-mRNA-1
tig0029609 exon 9090 9185 9090 ID=Msa1442020-mRNA-1:exon:13182;Parent=Msa1442020-mRNA-1
tig0029609 exon 9365 9435 9365 ID=Msa1442020-mRNA-1:exon:13181;Parent=Msa1442020-mRNA-1
tig0029609 exon 9515 9619 9515 ID=Msa1442020-mRNA-1:exon:13180;Parent=Msa1442020-mRNA-1
tig0029609 exon 11324 11414 11324 ID=Msa1442020-mRNA-1:exon:13179;Parent=Msa1442020-mRNA-1
tig0029609 exon 11511 11561 11511 ID=Msa1442020-mRNA-1:exon:13178;Parent=Msa1442020-mRNA-1
tig0029609 exon 12322 12410 12322 ID=Msa1442020-mRNA-1:exon:13177;Parent=Msa1442020-mRNA-1
tig0029609 exon 12728 12970 12728 ID=Msa1442020-mRNA-1:exon:13176;Parent=Msa1442020-mRNA-1
tig0029609 exon 13114 13283 13114 ID=Msa1442020-mRNA-1:exon:13175;Parent=Msa1442020-mRNA-1
tig0029609 exon 13569 13674 13569 ID=Msa1442020-mRNA-1:exon:13174;Parent=Msa1442020-mRNA-1
tig0029609 exon 13785 13952 13785 ID=Msa1442020-mRNA-1:exon:13173;Parent=Msa1442020-mRNA-1
tig0029609 exon 14204 14242 14204 ID=Msa1442020-mRNA-1:exon:13172;Parent=Msa1442020-mRNA-1
tig0029609 exon 14334 14504 14334 ID=Msa1442020-mRNA-1:exon:13171;Parent=Msa1442020-mRNA-1
tig0029609 exon 14583 14890 14583 ID=Msa1442020-mRNA-1:exon:13170;Parent=Msa1442020-mRNA-1
tig0029609 five_prime_UTR 14742 14890 14742 ID=Msa1442020-mRNA-1:five_prime_utr;Parent=Msa1442020-mRNA-1
tig0029609 CDS 14583 14741 14583 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 14334 14504 14334 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 14204 14242 14204 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 13785 13952 13785 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 13569 13674 13569 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 13114 13283 13114 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 12728 12970 12728 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 12322 12410 12322 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 11511 11561 11511 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 11324 11414 11324 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 9515 9619 9515 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 9365 9435 9365 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 9090 9185 9090 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 CDS 8489 8555 8489 ID=Msa1442020-mRNA-1:cds;Parent=Msa1442020-mRNA-1
tig0029609 three_prime_UTR 8248 8488 8248 ID=Msa1442020-mRNA-1:three_prime_utr;Parent=Msa1442020-mRNA-1
Gene Sequence

>Msa1442020

ATGCGTTCATTGATGGTACATTTATATGGAAGAAGAAGAAGAAGCATGATATTGACATCCCCATACAACAACATTACCAATTCACTATCACTCATTCATAACCACAATTATTATTATTTCTCTACTAATCACAAACCTCCCTTTCTTCAATTCTTCTCCGGTATTCTTCTCAGGCCTACAATTCGATCATTTTCTACCACAATCACTTCTTCATCTAAAACCATGTCCAATTTCGATTCCGACTCAGTCACTTACCTCAAACAACAAGAAGCTGTTGAGATTGATGAAACTCTCATGGGTCCTCTTGGCTTCAGCGTCGACCAACTCATGGAATTGGCTGGTTTGAGCGTCGCTACTTCCATATATGAGGTTTACAAACCGGGCGAGTATAGTCGTGTTCTTACTATATGTGGTCCTGGTAACAATGGTGGTGATGGTCTGGTGGCTGCCCGTCACCTGCATCACTTTGGTTATAAGCCTTTGGTCTGTTACCCAAAGCGTACCCCCAAGCCTCTATATGCTGGGTTAGTTACTCAGCTTGAAGCATTGTCGATCCCTTTCTTGTCGGTGGAAGATCTACCATCAGATTTCTCCAAGGACTTTGACATTCTAGTAGATGCCATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCCTTTGATGATTTGATCCAAAGATTTATTTCTTTTCGTAATAATCATAATCAAATTGGCCAAAAAAGACCGGTTATAGTCTCTGTAGATATTCCTTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGCACAGGAATTAAACCTGATATGTTGATCTCTTTGACCGCGCCAAAATTCTGTGCAAAGAAGTTTGGCGGCCCTCACCACTTTTTAGGAGGTAGATTTGTCCCACCTGCTATTGCTGAAAAGTATAAGCTTATACTTCCACCATATCCTGGAACATCCATGTGTGTCCGAATTGGAAAGCCTCCTCAAATCGATATTTCAGCTCTACGAGAGAACTATATCTCTCCAGAATTTCTTGAAGACCAGGTGGAGGCAGACCCCATTAATCAGTTCCGTAAATGGTTTGATGATGCGTTGGCTGCGAGTTTGAAGGAACCAAATGCTATGGCCTTGTCAACTGTAGGAAAGGATGGAAAACCCTCATCACGGATCGTATTGCTAAAAGGCTTTGACAAGGATGGATTTGTGTGGTTCACAAACTATGAAAGTCAAAAGGGACGTGCGTTATCTGAAAATCCACATGCATCAATTCTTTTTTATTGGGATGGTTTAAACCGACAGGTACGTGTGGAGGGGTATGTTCAGAAAGTTTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGTCCTAGAGGTAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTTCTGTAGTGACTGGTAGGCATGTTCTTCACGAGCAGTACAAAGAGCTGGAACAAAAATATGCTGATGGAAGTGTGATCCCTAAACCTAAAAACTGGGGAGGATACAGGCTAACACCAAATCTTTTTGAATTTTGGCAAGGACAGAAATCTCGCTTGCATGACAGGTTGCAATACGTTCCCCATGAGATAGATGGAAAAAAGCTATGGAAGGTTGAGCGGTTGGCTCCCTGA

Protein sequence

>Msa1442020

MRSLMVHLYGRRRRSMILTSPYNNITNSLSLIHNHNYYYFSTNHKPPFLQFFSGILLRPTIRSFSTTITSSSKTMSNFDSDSVTYLKQQEAVEIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPGEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPLVCYPKRTPKPLYAGLVTQLEALSIPFLSVEDLPSDFSKDFDILVDAMFGFSFHGSPRPPFDDLIQRFISFRNNHNQIGQKRPVIVSVDIPSGWHVEEGDVDGTGIKPDMLISLTAPKFCAKKFGGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPQIDISALRENYISPEFLEDQVEADPINQFRKWFDDALAASLKEPNAMALSTVGKDGKPSSRIVLLKGFDKDGFVWFTNYESQKGRALSENPHASILFYWDGLNRQVRVEGYVQKVSDEESEQYFHSRPRGSQIGAIVSKQSSVVTGRHVLHEQYKELEQKYADGSVIPKPKNWGGYRLTPNLFEFWQGQKSRLHDRLQYVPHEIDGKKLWKVERLAP*