AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0172110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172110 MtrunA17_Chr1g0190301 97.938 388 8 0 1 388 1 388 0.0 776
Msa0172110 MtrunA17_Chr7g0274471 54.415 419 134 11 8 385 37 439 8.52e-129 377
Msa0172110 MtrunA17_Chr7g0261911 44.656 421 177 11 21 388 72 489 7.48e-95 292
Msa0172110 MtrunA17_Chr7g0258551 58.955 134 54 1 174 307 211 343 3.57e-51 176
Msa0172110 MtrunA17_Chr1g0175091 55.488 164 59 5 166 329 253 402 3.94e-50 174
Msa0172110 MtrunA17_Chr2g0291021 55.921 152 63 2 175 322 49 200 5.29e-47 163
Msa0172110 MtrunA17_Chr7g0254981 52.903 155 70 2 174 325 49 203 1.14e-44 155
Msa0172110 MtrunA17_Chr6g0461641 45.026 191 64 5 171 327 38 221 1.36e-40 148
Msa0172110 MtrunA17_Chr2g0321461 43.558 163 72 2 161 303 31 193 1.32e-36 137
Msa0172110 MtrunA17_Chr5g0409731 42.857 182 81 5 168 326 18 199 1.92e-34 129
Msa0172110 MtrunA17_Chr5g0417521 40.625 160 77 3 171 314 11 168 4.24e-34 129
Msa0172110 MtrunA17_Chr8g0356501 42.759 145 74 2 165 303 27 168 6.45e-34 129
Msa0172110 MtrunA17_Chr1g0175071 46.479 142 75 1 165 306 167 307 8.34e-34 128
Msa0172110 MtrunA17_Chr4g0042451 41.176 170 78 4 171 325 13 175 1.12e-33 128
Msa0172110 MtrunA17_Chr2g0310011 45.985 137 71 2 165 298 25 161 2.13e-32 124
Msa0172110 MtrunA17_Chr7g0242521 40.373 161 91 3 175 331 13 172 1.43e-30 117
Msa0172110 MtrunA17_Chr2g0290991 41.781 146 73 3 167 300 31 176 1.62e-28 113
Msa0172110 MtrunA17_Chr1g0197171 40.559 143 76 2 167 300 36 178 2.79e-28 112
Msa0172110 MtrunA17_Chr1g0175081 55.263 76 33 1 164 239 12 86 8.30e-24 94.7
Msa0172110 MtrunA17_Chr7g0258531 42.636 129 71 2 174 300 212 339 5.21e-23 99.0
Msa0172110 MtrunA17_Chr1g0162931 69.643 56 17 0 176 231 19 74 3.05e-20 89.7
Msa0172110 MtrunA17_Chr1g0210911 67.857 56 18 0 176 231 23 78 6.28e-20 89.7
Msa0172110 MtrunA17_Chr3g0095611 59.649 57 23 0 175 231 19 75 1.21e-19 86.7
Msa0172110 MtrunA17_Chr2g0288601 63.793 58 21 0 176 233 72 129 2.45e-19 83.6
Msa0172110 MtrunA17_Chr7g0243081 59.701 67 26 1 166 231 61 127 6.35e-19 87.0
Msa0172110 MtrunA17_Chr2g0320231 61.194 67 25 1 166 231 87 153 1.14e-18 86.7
Msa0172110 MtrunA17_Chr8g0379121 64.286 56 20 0 176 231 112 167 2.26e-18 86.3
Msa0172110 MtrunA17_Chr3g0109981 42.982 114 49 3 143 254 254 353 2.44e-18 86.3
Msa0172110 MtrunA17_Chr1g0154261 60.938 64 25 0 176 239 127 190 3.90e-18 84.0
Msa0172110 MtrunA17_Chr8g0366281 57.534 73 29 1 169 239 167 239 8.60e-18 84.0
Msa0172110 MtrunA17_Chr6g0479431 62.500 64 22 1 176 237 203 266 1.23e-17 83.6
Msa0172110 MtrunA17_Chr5g0410741 63.333 60 22 0 172 231 216 275 3.78e-17 82.4
Msa0172110 MtrunA17_Chr2g0283951 58.571 70 28 1 157 225 70 139 5.39e-17 81.6
Msa0172110 MtrunA17_Chr4g0062921 48.235 85 42 1 166 248 226 310 2.75e-15 77.0
Msa0172110 MtrunA17_Chr7g0275401 60.345 58 22 1 171 228 188 244 1.35e-14 73.9
Msa0172110 MtrunA17_Chr2g0304841 58.621 58 23 1 171 228 209 265 1.42e-14 75.5
Msa0172110 MtrunA17_Chr4g0009901 50.000 76 36 2 171 246 164 237 2.60e-14 72.8
Msa0172110 MtrunA17_Chr4g0045361 61.111 54 21 0 175 228 274 327 1.53e-13 71.6
Msa0172110 MtrunA17_Chr1g0149841 52.941 68 31 1 171 238 187 253 4.73e-13 70.5
Msa0172110 MtrunA17_Chr3g0137101 56.897 58 24 1 171 228 194 250 4.93e-13 70.5
Msa0172110 MtrunA17_Chr5g0422621 58.929 56 23 0 173 228 196 251 6.15e-13 69.3
Msa0172110 MtrunA17_Chr1g0198601 49.231 65 33 0 173 237 209 273 8.33e-13 69.3
Msa0172110 MtrunA17_Chr5g0402631 53.731 67 30 1 172 237 211 277 8.96e-13 68.9
Msa0172110 MtrunA17_Chr4g0067981 43.478 92 43 2 175 258 215 305 1.47e-12 69.3
Msa0172110 MtrunA17_Chr4g0031961 50.000 72 34 2 158 228 113 183 1.61e-12 67.8
Msa0172110 MtrunA17_Chr4g0074401 50.000 64 31 1 171 234 199 261 2.59e-12 68.2
Msa0172110 MtrunA17_Chr1g0149831 55.932 59 22 1 170 228 123 177 2.90e-12 65.9
Msa0172110 MtrunA17_Chr4g0054981 55.172 58 25 1 171 228 306 362 4.10e-12 67.8
Msa0172110 MtrunA17_Chr1g0161431 52.941 68 25 2 161 228 192 252 4.16e-12 67.8
Msa0172110 MtrunA17_Chr4g0074411 51.562 64 30 1 171 234 197 259 5.02e-12 67.4
Msa0172110 MtrunA17_Chr4g0009981 53.448 58 26 1 171 228 112 168 6.22e-12 65.5
Msa0172110 MtrunA17_Chr7g0255711 55.556 54 23 1 175 228 91 143 1.03e-11 65.1
Msa0172110 MtrunA17_Chr4g0074421 53.571 56 25 1 170 225 128 182 1.20e-11 63.5
Msa0172110 MtrunA17_Chr2g0294911 50.847 59 28 1 170 228 206 263 3.52e-11 64.7
Msa0172110 MtrunA17_Chr4g0040481 49.153 59 29 1 173 231 156 213 4.04e-11 64.3
Msa0172110 MtrunA17_Chr2g0324891 49.153 59 29 1 173 231 159 216 4.66e-11 63.9
Msa0172110 MtrunA17_Chr5g0400241 53.448 58 26 1 171 228 307 363 6.33e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172110 AT5G29000.1 56.972 251 99 5 61 306 76 322 8.49e-84 260
Msa0172110 AT5G29000.3 56.972 251 99 5 61 306 76 322 8.49e-84 260
Msa0172110 AT5G29000.2 56.972 251 99 5 61 306 119 365 2.20e-83 260
Msa0172110 AT4G28610.1 49.020 306 131 9 17 304 57 355 3.34e-77 244
Msa0172110 AT3G04450.4 50.365 274 120 7 43 309 71 335 2.23e-76 242
Msa0172110 AT3G04450.2 50.365 274 120 7 43 309 71 335 2.23e-76 242
Msa0172110 AT3G04450.1 50.545 275 118 7 43 309 111 375 4.84e-76 242
Msa0172110 AT2G20400.1 49.333 225 95 4 93 304 142 360 1.73e-56 190
Msa0172110 AT2G20400.2 49.115 226 95 5 93 304 142 361 1.04e-54 186
Msa0172110 AT2G01060.1 58.125 160 58 3 161 315 5 160 2.21e-51 174
Msa0172110 AT5G29000.4 52.778 180 79 3 61 238 119 294 1.15e-49 170
Msa0172110 AT5G06800.1 57.343 143 60 1 167 309 184 325 3.66e-49 170
Msa0172110 AT5G06800.2 55.405 148 60 2 167 309 184 330 7.26e-47 164
Msa0172110 AT3G04450.3 47.000 200 93 6 43 238 111 301 1.16e-46 162
Msa0172110 AT3G13040.3 56.643 143 57 1 170 307 236 378 6.70e-43 155
Msa0172110 AT3G13040.1 56.643 143 57 1 170 307 236 378 6.70e-43 155
Msa0172110 AT3G13040.2 56.643 143 57 1 170 307 236 378 6.70e-43 155
Msa0172110 AT4G13640.1 42.105 209 96 6 161 356 22 218 6.45e-42 149
Msa0172110 AT3G24120.1 45.882 170 78 4 162 317 27 196 3.88e-40 144
Msa0172110 AT4G13640.2 41.509 212 96 7 161 356 22 221 8.25e-40 144
Msa0172110 AT3G24120.2 45.087 173 78 5 162 317 27 199 4.82e-38 139
Msa0172110 AT3G04030.3 44.304 158 65 2 165 303 35 188 7.65e-38 140
Msa0172110 AT5G18240.1 45.122 164 63 3 161 303 31 188 2.73e-37 139
Msa0172110 AT5G18240.4 45.122 164 63 3 161 303 31 188 2.73e-37 139
Msa0172110 AT1G69580.1 44.311 167 73 2 167 316 26 189 3.58e-37 137
Msa0172110 AT1G69580.2 44.706 170 69 5 167 316 26 190 1.24e-36 136
Msa0172110 AT3G04030.2 43.038 158 66 3 165 303 35 187 8.97e-35 132
Msa0172110 AT1G79430.2 44.295 149 74 3 165 307 24 169 2.70e-34 130
Msa0172110 AT5G18240.5 44.512 164 62 4 161 303 31 186 3.03e-34 131
Msa0172110 AT5G45580.2 40.373 161 78 1 165 307 13 173 3.74e-33 125
Msa0172110 AT3G04030.1 41.772 158 63 3 165 303 35 182 3.81e-32 125
Msa0172110 AT5G45580.1 40.645 155 74 1 171 307 3 157 5.32e-32 122
Msa0172110 AT5G18240.2 42.683 164 61 4 161 303 31 182 1.23e-31 124
Msa0172110 AT5G18240.3 42.683 164 61 4 161 303 31 182 1.23e-31 124
Msa0172110 AT2G01060.2 56.757 111 43 2 210 315 1 111 8.16e-31 118
Msa0172110 AT3G12730.1 39.752 161 89 4 159 311 7 167 5.12e-30 115
Msa0172110 AT5G06800.3 61.644 73 28 0 167 239 184 256 3.17e-25 103
Msa0172110 AT1G14600.1 69.643 56 17 0 176 231 24 79 9.11e-20 88.2
Msa0172110 AT2G42660.1 56.923 65 28 0 176 240 51 115 1.15e-19 88.2
Msa0172110 AT4G04605.1 49.425 87 43 1 163 248 1 87 4.24e-19 85.5
Msa0172110 AT5G42630.2 60.938 64 25 0 176 239 106 169 2.22e-18 83.6
Msa0172110 AT2G02060.2 67.925 53 17 0 176 228 30 82 3.17e-18 84.0
Msa0172110 AT2G02060.1 67.925 53 17 0 176 228 30 82 3.17e-18 84.0
Msa0172110 AT2G40260.1 60.606 66 25 1 167 231 73 138 3.68e-18 85.9
Msa0172110 AT5G42630.1 60.938 64 25 0 176 239 106 169 5.17e-18 84.0
Msa0172110 AT4G17695.1 62.121 66 23 1 176 239 165 230 5.53e-18 84.3
Msa0172110 AT3G04030.5 39.655 116 47 2 207 303 1 112 2.15e-17 82.8
Msa0172110 AT5G16560.1 57.143 77 30 2 172 245 216 292 3.15e-17 83.2
Msa0172110 AT1G32240.2 63.333 60 22 0 172 231 210 269 3.43e-17 82.8
Msa0172110 AT2G06020.1 52.308 65 31 0 167 231 78 142 4.02e-17 81.6
Msa0172110 AT1G32240.1 63.333 60 22 0 172 231 210 269 4.11e-17 82.8
Msa0172110 AT2G38300.1 60.714 56 22 0 176 231 55 110 4.42e-17 82.0
Msa0172110 AT1G79430.1 38.318 107 57 3 207 307 1 104 9.75e-16 77.4
Msa0172110 AT4G04580.1 55.385 65 28 1 176 240 15 78 1.62e-15 74.3
Msa0172110 AT2G03500.1 57.746 71 28 1 169 237 225 295 1.92e-15 77.8
Msa0172110 AT1G25550.1 57.143 63 27 0 172 234 206 268 7.25e-15 75.5
Msa0172110 AT4G37180.1 52.308 65 31 0 164 228 199 263 7.46e-14 72.8
Msa0172110 AT4G37180.2 52.308 65 31 0 164 228 206 270 8.54e-14 72.4
Msa0172110 AT1G68670.1 51.515 66 32 0 172 237 212 277 1.50e-13 71.6
Msa0172110 AT4G31920.1 48.101 79 39 2 171 249 179 255 1.91e-13 72.0
Msa0172110 AT3G16857.3 64.815 54 18 1 175 228 167 219 5.81e-13 70.9
Msa0172110 AT3G16857.2 64.815 54 18 1 175 228 237 289 6.24e-13 70.9
Msa0172110 AT3G16857.1 64.815 54 18 1 175 228 237 289 6.71e-13 70.9
Msa0172110 AT5G58080.1 57.895 57 23 1 172 228 191 246 8.82e-13 70.1
Msa0172110 AT4G04555.1 47.143 70 36 1 169 238 8 76 9.39e-13 64.7
Msa0172110 AT5G44190.1 54.237 59 26 1 173 231 145 202 1.51e-12 68.9
Msa0172110 AT2G25180.1 59.322 59 23 1 170 228 190 247 1.54e-12 69.3
Msa0172110 AT5G44190.2 54.237 59 26 1 173 231 145 202 1.71e-12 68.6
Msa0172110 AT1G49560.1 55.556 63 28 0 175 237 192 254 2.40e-12 67.8
Msa0172110 AT2G40970.1 57.407 54 22 1 175 228 105 157 2.63e-12 66.6
Msa0172110 AT1G25550.2 59.259 54 22 0 172 225 206 259 2.64e-12 67.0
Msa0172110 AT5G05090.1 55.556 54 23 1 175 228 81 133 3.54e-12 66.6
Msa0172110 AT3G62670.1 53.968 63 25 1 175 233 211 273 4.57e-12 67.8
Msa0172110 AT5G59570.2 50.820 61 29 1 168 228 134 193 4.89e-12 66.6
Msa0172110 AT5G59570.1 50.820 61 29 1 168 228 134 193 4.89e-12 66.6
Msa0172110 AT3G10760.1 55.556 54 23 1 175 228 105 157 4.97e-12 67.0
Msa0172110 AT3G25790.1 54.545 55 25 0 180 234 201 255 6.12e-12 67.0
Msa0172110 AT3G46640.3 45.833 72 38 1 157 228 126 196 7.05e-12 66.2
Msa0172110 AT3G46640.2 45.833 72 38 1 157 228 126 196 7.54e-12 66.2
Msa0172110 AT3G46640.1 45.833 72 38 1 157 228 126 196 7.54e-12 66.2
Msa0172110 AT2G20570.1 55.932 59 25 1 173 231 151 208 1.18e-11 66.2
Msa0172110 AT4G37180.3 50.000 62 31 0 164 225 199 260 1.32e-11 65.1
Msa0172110 AT4G18020.8 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0172110 AT4G18020.11 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0172110 AT4G18020.4 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0172110 AT4G18020.5 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0172110 AT4G18020.10 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0172110 AT4G18020.7 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0172110 AT4G18020.3 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0172110 AT4G18020.2 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0172110 AT4G18020.1 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0172110 AT4G18020.6 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0172110 AT4G18020.9 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0172110 AT2G20570.2 58.182 55 22 1 177 231 171 224 2.35e-11 65.5
Msa0172110 AT1G49190.1 52.632 57 24 1 175 228 215 271 2.93e-11 65.1
Msa0172110 AT1G13300.1 47.619 63 33 0 175 237 181 243 6.91e-11 63.5
Msa0172110 AT1G67710.3 57.692 52 22 0 177 228 121 172 8.90e-11 63.5
Msa0172110 AT1G67710.2 57.692 52 22 0 177 228 130 181 9.83e-11 63.5

Find 147 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTCTGTGCTTGTATTC+TGG 0.101134 1_4:-57057087 None:intergenic
TGTATTCCACATGGTCATTC+TGG 0.149403 1_4:-57054793 None:intergenic
GGGATGTTTCAACTGTATTT+AGG 0.160343 1_4:+57057437 Msa0172110:three_prime_UTR
GTTAACTTATTATGGGAAAA+TGG 0.168932 1_4:-57057495 None:intergenic
TTGTAGAGGTTAACTTATTA+TGG 0.169637 1_4:-57057503 None:intergenic
AGGAAGATCATTAACTTCTT+TGG 0.221222 1_4:-57055477 None:intergenic
CACATACCTTCTGATGATTC+TGG 0.228637 1_4:-57055879 None:intergenic
TTGCTCTGTGCTTGTATTCT+GGG 0.237413 1_4:-57057086 None:intergenic
CCGAGAAGTTCATTCCAATT+TGG 0.239899 1_4:-57054908 None:intergenic
ATGATTCTATTCAGCCAAAT+TGG 0.254038 1_4:+57054894 Msa0172110:CDS
CTCCTTGAAATCCGTTGTTT+TGG 0.268176 1_4:-57054843 None:intergenic
GTTGTTCATGAAGCCGCTTC+TGG 0.275179 1_4:-57056714 None:intergenic
TCTGGAGTCCAACGCATTCT+AGG 0.277206 1_4:-57055533 None:intergenic
TGAAACCAAATCACTGATTA+AGG 0.289023 1_4:-57057301 None:intergenic
GACTTCCTTAATCAGTGATT+TGG 0.309411 1_4:+57057296 Msa0172110:three_prime_UTR
TTAACTTATTATGGGAAAAT+GGG 0.313885 1_4:-57057494 None:intergenic
ATGCATAATGAAGAATGAAT+TGG 0.319074 1_4:-57053250 None:intergenic
ATAGGAGGCTATAAGCTTCT+AGG 0.322858 1_4:-57053674 None:intergenic
GTATTCTGGGAACTTCCTTC+TGG 0.323449 1_4:-57057073 None:intergenic
TGCATAATGAAGAATGAATT+GGG 0.323756 1_4:-57053249 None:intergenic
GGATGTTTCAACTGTATTTA+GGG 0.328120 1_4:+57057438 Msa0172110:three_prime_UTR
TTTAGGGATTTATAAGTTAT+GGG 0.339672 1_4:+57057454 Msa0172110:three_prime_UTR
ATTTAGGGATTTATAAGTTA+TGG 0.343282 1_4:+57057453 Msa0172110:three_prime_UTR
ACATTTCTTGTCCTCGACTT+AGG 0.347355 1_4:+57057323 Msa0172110:three_prime_UTR
AAGGGAGATCAAAGGGAAAA+AGG 0.353136 1_4:-57057572 None:intergenic
TGTAGAGGTTAACTTATTAT+GGG 0.367347 1_4:-57057502 None:intergenic
ACAAAGTTGATTGATTCATC+TGG 0.372412 1_4:+57054528 Msa0172110:five_prime_UTR
GAATACAAGCACAGAGCAAA+AGG 0.372831 1_4:+57057090 Msa0172110:CDS
TTCTGGGTGGGAACATTATC+AGG 0.378603 1_4:-57054776 None:intergenic
TGCTTACTTTATTCTCGTGT+TGG 0.378777 1_4:+57057643 Msa0172110:three_prime_UTR
CATTTCTTGTCCTCGACTTA+GGG 0.386134 1_4:+57057324 Msa0172110:three_prime_UTR
ATTGAAGTCAACTTCTTCTC+TGG 0.390129 1_4:-57056329 None:intergenic
TATTCTTACGTCCGCTCATT+CGG 0.390922 1_4:+57053203 Msa0172110:five_prime_UTR
TTGTATATTTATGGAATGTT+TGG 0.399028 1_4:+57057384 Msa0172110:three_prime_UTR
GTAGTCGACACAGAAGAATT+AGG 0.399816 1_4:-57055497 None:intergenic
GTATTCCACATGGTCATTCT+GGG 0.400152 1_4:-57054792 None:intergenic
TCCTATGAAGCATGAGGATT+AGG 0.426267 1_4:+57053691 Msa0172110:five_prime_UTR
AGAACTTCATGAGGCCTTTG+TGG 0.428094 1_4:+57055553 Msa0172110:CDS
AGCTACCGGTGAACTTGAGC+TGG 0.429993 1_4:+57057126 Msa0172110:CDS
GCCTAATCCTCATGCTTCAT+AGG 0.435700 1_4:-57053692 None:intergenic
GGAGCTTCTAGAAGCATTGT+TGG 0.437697 1_4:+57057409 Msa0172110:three_prime_UTR
TCGGAAGTTTACTTCTCAAA+AGG 0.438829 1_4:-57057537 None:intergenic
TGCCAAAACAACGGATTTCA+AGG 0.441739 1_4:+57054841 Msa0172110:CDS
CCAAATTGGAATGAACTTCT+CGG 0.447252 1_4:+57054908 Msa0172110:CDS
ACAAAGGCCTCATGAAGTTC+TGG 0.447758 1_4:-57055551 None:intergenic
TATTCCCTCTTCCTCGATGC+AGG 0.454247 1_4:+57054580 Msa0172110:CDS
CTTCTTCTTCTTCCTTCGTA+AGG 0.456915 1_4:+57053312 Msa0172110:five_prime_UTR
ACTTAGGGTATAATTTGCAT+TGG 0.466215 1_4:+57057339 Msa0172110:three_prime_UTR
ATCAAGTTCAAGACACCCTT+AGG 0.470004 1_4:-57055697 None:intergenic
ATATGTAGAGGCTACTCCTA+AGG 0.470935 1_4:+57055681 Msa0172110:intron
TATACTGCTGCTGTGAAACC+TGG 0.475770 1_4:-57055439 None:intergenic
GTGATAAAACTATACGAGAT+AGG 0.478425 1_4:-57057595 None:intergenic
GAAATACTAGATGCCTTCAC+AGG 0.489007 1_4:-57057225 None:intergenic
GATAGTGCCACACTTGATAG+TGG 0.493745 1_4:-57056971 None:intergenic
ACATAACGTCACTTTCTTGA+GGG 0.494013 1_4:-57054715 None:intergenic
GGAGTGAAAACAAGGTGGGT+GGG 0.497136 1_4:+57053170 None:intergenic
TGATGATTCTGGTTTGTACC+TGG 0.500432 1_4:-57055868 None:intergenic
AGAAAGTGACGTTATGTCCT+GGG 0.500596 1_4:+57054721 Msa0172110:CDS
AGATAGGAAGGGAGATCAAA+GGG 0.504847 1_4:-57057579 None:intergenic
AATTGAAGAATATCTTCAAA+TGG 0.505497 1_4:-57054752 None:intergenic
ATTGTGGTTGTATAGGCCTA+AGG 0.506694 1_4:+57056657 Msa0172110:intron
TGCAGCCTGCATCGAGGAAG+AGG 0.509129 1_4:-57054585 None:intergenic
TGCTTCTACATACAACATGC+TGG 0.510667 1_4:+57057248 Msa0172110:three_prime_UTR
AGAAGCATTGCGGCTGCAGA+TGG 0.512926 1_4:+57056687 Msa0172110:CDS
TACAATGGTTCTGAAGTCTT+GGG 0.514053 1_4:+57054812 Msa0172110:CDS
AAGAAAGTGACGTTATGTCC+TGG 0.515386 1_4:+57054720 Msa0172110:CDS
TCTCTTGATGCAAGAGACCC+AGG 0.517615 1_4:+57055421 Msa0172110:CDS
AATTCCAACATCAGAAGTGT+TGG 0.526621 1_4:+57054614 Msa0172110:CDS
ATACAATGGTTCTGAAGTCT+TGG 0.526812 1_4:+57054811 Msa0172110:CDS
TTGAACTTGATGAAAGTTGA+GGG 0.529752 1_4:+57055709 Msa0172110:CDS
TTGTGGGTGGTGCGGTAAGT+TGG 0.530504 1_4:-57057156 None:intergenic
CGTTATCAGGCTGTTCAGAA+GGG 0.533325 1_4:-57054652 None:intergenic
TAAAACTATACGAGATAGGA+AGG 0.533751 1_4:-57057591 None:intergenic
TTCTCCCAGCTCAAGTTCAC+CGG 0.534132 1_4:-57057131 None:intergenic
GAGTGAAAACAAGGTGGGTG+GGG 0.536550 1_4:+57053171 None:intergenic
TAACTTATTATGGGAAAATG+GGG 0.538218 1_4:-57057493 None:intergenic
GTCTCTTGCATCAAGAGAGA+AGG 0.539948 1_4:-57055416 None:intergenic
AATTTAGAAAACACAAATGA+AGG 0.541617 1_4:+57057007 Msa0172110:CDS
TCATCTGTAGATGCTTCCCT+TGG 0.544034 1_4:-57056910 None:intergenic
TCATGTGAAAAGCCATCTGC+AGG 0.546156 1_4:+57055744 Msa0172110:CDS
ACTAGATGCCTTCACAGGGT+TGG 0.546742 1_4:-57057220 None:intergenic
ACGTTATCAGGCTGTTCAGA+AGG 0.551148 1_4:-57054653 None:intergenic
GAGATAGGAAGGGAGATCAA+AGG 0.552104 1_4:-57057580 None:intergenic
TAGAAGCATTGTTGGATCGA+GGG 0.552578 1_4:+57057417 Msa0172110:three_prime_UTR
TTGTGGTTGTATAGGCCTAA+GGG 0.553041 1_4:+57056658 Msa0172110:intron
AAGAATTTCCAACCCTGTGA+AGG 0.554623 1_4:+57057212 Msa0172110:three_prime_UTR
TCTCTTGCATCAAGAGAGAA+GGG 0.556360 1_4:-57055415 None:intergenic
AGATCATTAACTTCTTTGGA+TGG 0.562377 1_4:-57055473 None:intergenic
TTCAAATGGATCAGTTCCCC+AGG 0.563936 1_4:-57054738 None:intergenic
AATGCTTCTGTAATCCCCTT+AGG 0.564243 1_4:-57056673 None:intergenic
AATACAAGCACAGAGCAAAA+GGG 0.565422 1_4:+57057091 Msa0172110:CDS
ATATTTATGGAATGTTTGGA+TGG 0.565950 1_4:+57057388 Msa0172110:three_prime_UTR
TATGTAGAGGCTACTCCTAA+GGG 0.566576 1_4:+57055682 Msa0172110:intron
CTGATTGACTGCTTCCACAA+AGG 0.570201 1_4:-57055567 None:intergenic
GACATAACGTCACTTTCTTG+AGG 0.571867 1_4:-57054716 None:intergenic
TTCAGAAATATAGAACTGCC+AGG 0.576431 1_4:+57055850 Msa0172110:intron
CTAGAAGCATTGTTGGATCG+AGG 0.576857 1_4:+57057416 Msa0172110:three_prime_UTR
GGAGATGATGCTAAAGCTAC+CGG 0.580790 1_4:+57057112 Msa0172110:CDS
AATCTAAGCCTAGAATGCGT+TGG 0.584166 1_4:+57055525 Msa0172110:CDS
AGGAGTGAAAACAAGGTGGG+TGG 0.585250 1_4:+57053169 None:intergenic
AGATTCAGATTGAGAACCAA+GGG 0.585597 1_4:+57056894 Msa0172110:CDS
GTGGAAGCAGTCAATCAGCT+TGG 0.585863 1_4:+57055572 Msa0172110:CDS
AATAGACGAAGACATAGCTC+TGG 0.590376 1_4:-57054561 None:intergenic
AACAACGGATTTCAAGGAGT+GGG 0.590584 1_4:+57054847 Msa0172110:CDS
GAAGCAGTCAATCAGCTTGG+TGG 0.592276 1_4:+57055575 Msa0172110:CDS
AATGGTTCTGAAGTCTTGGG+TGG 0.595066 1_4:+57054815 Msa0172110:CDS
TGTCTCATGAGCCGAATGAG+CGG 0.595179 1_4:-57053214 None:intergenic
GCATAATGAAGAATGAATTG+GGG 0.596516 1_4:-57053248 None:intergenic
TAATCCTCATGCTTCATAGG+AGG 0.600130 1_4:-57053689 None:intergenic
ACACTTGATAGTGGAGCAGA+AGG 0.602869 1_4:-57056962 None:intergenic
TATGACAGAACCAAAATCAC+AGG 0.603724 1_4:+57054940 Msa0172110:CDS
CTTGAACTTGATGAAAGTTG+AGG 0.606827 1_4:+57055708 Msa0172110:CDS
GTGTCCAACACTTCTGATGT+TGG 0.607725 1_4:-57054618 None:intergenic
GTCTGACACTAATATGATGT+TGG 0.608371 1_4:+57053723 Msa0172110:five_prime_UTR
ATACTGCTGCTGTGAAACCT+GGG 0.609600 1_4:-57055438 None:intergenic
GCGGCTTCATGAACAACTTG+AGG 0.611704 1_4:+57056720 Msa0172110:CDS
CAGATTCAGATTGAGAACCA+AGG 0.612607 1_4:+57056893 Msa0172110:CDS
AGAATGTATTTCTGAAGCAG+AGG 0.614653 1_4:-57054684 None:intergenic
TTCCACATGGTCATTCTGGG+TGG 0.615350 1_4:-57054789 None:intergenic
GCTACCGGTGAACTTGAGCT+GGG 0.615664 1_4:+57057127 Msa0172110:CDS
TCCACATGGTCATTCTGGGT+GGG 0.616235 1_4:-57054788 None:intergenic
GCAAATTATACCCTAAGTCG+AGG 0.622359 1_4:-57057334 None:intergenic
GCAGCCTGCATCGAGGAAGA+GGG 0.625876 1_4:-57054584 None:intergenic
AAACAACGGATTTCAAGGAG+TGG 0.628215 1_4:+57054846 Msa0172110:CDS
GTTATCAGGCTGTTCAGAAG+GGG 0.629071 1_4:-57054651 None:intergenic
CAGAACCATTGTATTCCACA+TGG 0.632141 1_4:-57054802 None:intergenic
TGCAGATGGAACTCCAGAAG+CGG 0.633918 1_4:+57056701 Msa0172110:CDS
TACAAACCAGAATCATCAGA+AGG 0.635144 1_4:+57055873 Msa0172110:CDS
TGTGGTTGTATAGGCCTAAG+GGG 0.641482 1_4:+57056659 Msa0172110:intron
TTCTGCTCCACTATCAAGTG+TGG 0.642875 1_4:+57056964 Msa0172110:CDS
GAAGACATAGCTCTGGTCGA+AGG 0.643788 1_4:-57054554 None:intergenic
ACTTCAGACAACATGCCAGA+AGG 0.644538 1_4:+57057058 Msa0172110:CDS
AAATACTAGATGCCTTCACA+GGG 0.647921 1_4:-57057224 None:intergenic
AGGATGAGAAGAGATTGTAG+AGG 0.647969 1_4:-57057517 None:intergenic
ATAGCCTCCTATGAAGCATG+AGG 0.648961 1_4:+57053685 Msa0172110:five_prime_UTR
AATGACCATGTGGAATACAA+TGG 0.649000 1_4:+57054797 Msa0172110:CDS
TTGGACTCCAGAACTTCATG+AGG 0.657310 1_4:+57055544 Msa0172110:CDS
GAAAGTGACGTTATGTCCTG+GGG 0.673471 1_4:+57054722 Msa0172110:CDS
AAAACTATACGAGATAGGAA+GGG 0.678315 1_4:-57057590 None:intergenic
GGGTGGAAATGCCAAAACAA+CGG 0.682227 1_4:+57054832 Msa0172110:CDS
GTTTGAGCAACAGATGAAGT+CGG 0.685798 1_4:+57056934 Msa0172110:CDS
TGAGCGGACGTAAGAATACG+AGG 0.695025 1_4:-57053198 None:intergenic
CTCTTGCATCAAGAGAGAAG+GGG 0.697249 1_4:-57055414 None:intergenic
AGGGGATTACAGAAGCATTG+CGG 0.709657 1_4:+57056677 Msa0172110:CDS
AATTGATGCAGCCTGCATCG+AGG 0.729819 1_4:-57054591 None:intergenic
TCCCACCCAGAATGACCATG+TGG 0.730540 1_4:+57054787 Msa0172110:CDS
ATAGTGATCGAACCTTACGA+AGG 0.732118 1_4:-57053324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAAAAAAACAATTATTTT+GGG - chr1_4:57053776-57053795 None:intergenic 10.0%
!!! AAAGAAAAAAACAATTATTT+TGG - chr1_4:57053777-57053796 None:intergenic 10.0%
!! ATAAATATACAAAAAATATC+TGG - chr1_4:57057376-57057395 None:intergenic 10.0%
!!! AGATATTTTTTGTATATTTA+TGG + chr1_4:57057375-57057394 Msa0172110:three_prime_UTR 10.0%
!! AGCAAATAATAAAGAAAATT+GGG - chr1_4:57053881-57053900 None:intergenic 15.0%
!! AAGCAAATAATAAAGAAAAT+TGG - chr1_4:57053882-57053901 None:intergenic 15.0%
!!! ACATTTTTTTTTCTTTACTT+AGG + chr1_4:57055768-57055787 Msa0172110:intron 15.0%
!!! TTCTATATTTCTGAAATTAA+GGG - chr1_4:57055845-57055864 None:intergenic 15.0%
!! AAAACAATTATAGATAAGTA+GGG - chr1_4:57056397-57056416 None:intergenic 15.0%
!! AAAAACAATTATAGATAAGT+AGG - chr1_4:57056398-57056417 None:intergenic 15.0%
!! AAAATAATTGGTCCAAAAAA+TGG - chr1_4:57053643-57053662 None:intergenic 20.0%
!! GCATCTGAAAATAAAATAAT+TGG - chr1_4:57053655-57053674 None:intergenic 20.0%
!! ATTAATATATGTAGCAATAG+AGG + chr1_4:57054144-57054163 Msa0172110:intron 20.0%
!! ATATAATACAGTAATTCCAA+AGG - chr1_4:57054244-57054263 None:intergenic 20.0%
!!! TTAAGTTGTTTATCTAATCA+AGG + chr1_4:57054458-57054477 Msa0172110:intron 20.0%
!! AATTGAAGAATATCTTCAAA+TGG - chr1_4:57054755-57054774 None:intergenic 20.0%
!!! GATTTTAATATTGTACTACA+AGG + chr1_4:57054979-57054998 Msa0172110:intron 20.0%
!!! GTTCTATATTTCTGAAATTA+AGG - chr1_4:57055846-57055865 None:intergenic 20.0%
!! ATATAAAGTTCATATAAACC+AGG + chr1_4:57055928-57055947 Msa0172110:intron 20.0%
!! TTGCTTATTATTTATATCTG+TGG + chr1_4:57055951-57055970 Msa0172110:intron 20.0%
!!! TTTCTTTTTATAGGCAAATA+CGG + chr1_4:57056040-57056059 Msa0172110:intron 20.0%
!! TTAATAAGCACATACATAAT+TGG + chr1_4:57056231-57056250 Msa0172110:intron 20.0%
!! AAACAATTATAGATAAGTAG+GGG - chr1_4:57056396-57056415 None:intergenic 20.0%
!! ACATTAATAACTGTACATAT+TGG - chr1_4:57056622-57056641 None:intergenic 20.0%
!! AATTTAGAAAACACAAATGA+AGG + chr1_4:57057007-57057026 Msa0172110:CDS 20.0%
!! TTGTATATTTATGGAATGTT+TGG + chr1_4:57057384-57057403 Msa0172110:three_prime_UTR 20.0%
!! ATTTAGGGATTTATAAGTTA+TGG + chr1_4:57057453-57057472 Msa0172110:three_prime_UTR 20.0%
!! TTTAGGGATTTATAAGTTAT+GGG + chr1_4:57057454-57057473 Msa0172110:three_prime_UTR 20.0%
!! TTAACTTATTATGGGAAAAT+GGG - chr1_4:57057497-57057516 None:intergenic 20.0%
! TGCATAATGAAGAATGAATT+GGG - chr1_4:57053252-57053271 None:intergenic 25.0%
! ATGCATAATGAAGAATGAAT+TGG - chr1_4:57053253-57053272 None:intergenic 25.0%
! AGCAGAAAAATAAAACAGAT+TGG - chr1_4:57053381-57053400 None:intergenic 25.0%
! GTCAACAGTGTAAAAAATAT+AGG - chr1_4:57054173-57054192 None:intergenic 25.0%
!! ATTTTGTCCAATTGTATGAT+TGG + chr1_4:57054262-57054281 Msa0172110:intron 25.0%
!!! TTACTTTTCGTATTGAAATC+AGG + chr1_4:57054501-57054520 Msa0172110:intron 25.0%
!! AAAAAACAAACCTGTGATTT+TGG - chr1_4:57054953-57054972 None:intergenic 25.0%
! TTCTAGTATTATTCACAGAT+AGG - chr1_4:57055021-57055040 None:intergenic 25.0%
! GTGAATAATACTAGAATATG+TGG + chr1_4:57055025-57055044 Msa0172110:intron 25.0%
! ATAATACTAGAATATGTGGA+TGG + chr1_4:57055029-57055048 Msa0172110:intron 25.0%
!! GGATAAGAAGTACAAAATAA+AGG - chr1_4:57055623-57055642 None:intergenic 25.0%
!! AGATTTTCCTTATTATCTCA+TGG + chr1_4:57055653-57055672 Msa0172110:intron 25.0%
! ATTAACACCATGAGATAATA+AGG - chr1_4:57055663-57055682 None:intergenic 25.0%
! GATATAAATAATAAGCAACC+TGG - chr1_4:57055949-57055968 None:intergenic 25.0%
!! GTTAAAATTTTGTCATTCAC+CGG + chr1_4:57056075-57056094 Msa0172110:intron 25.0%
! TTGATTCATCCAAAACAAAT+TGG - chr1_4:57056264-57056283 None:intergenic 25.0%
! TCATCTTCCTTACAAAATAT+GGG - chr1_4:57056814-57056833 None:intergenic 25.0%
!! GTGTTTTCTAAATTTTCAAC+TGG - chr1_4:57057001-57057020 None:intergenic 25.0%
! ATATTTATGGAATGTTTGGA+TGG + chr1_4:57057388-57057407 Msa0172110:three_prime_UTR 25.0%
! TAACTTATTATGGGAAAATG+GGG - chr1_4:57057496-57057515 None:intergenic 25.0%
! GTTAACTTATTATGGGAAAA+TGG - chr1_4:57057498-57057517 None:intergenic 25.0%
! TGTAGAGGTTAACTTATTAT+GGG - chr1_4:57057505-57057524 None:intergenic 25.0%
! TTGTAGAGGTTAACTTATTA+TGG - chr1_4:57057506-57057525 None:intergenic 25.0%
! AAAAAGGAACATAGAGATTT+CGG - chr1_4:57057559-57057578 None:intergenic 25.0%
GCATAATGAAGAATGAATTG+GGG - chr1_4:57053251-57053270 None:intergenic 30.0%
TTTCACAAGTTCAGTGAATT+CGG - chr1_4:57053470-57053489 None:intergenic 30.0%
!! TTTTGCTCACTTCCATTTTT+TGG + chr1_4:57053628-57053647 Msa0172110:intron 30.0%
!! TCTTTTGTTTAACCACTCTT+TGG + chr1_4:57053792-57053811 Msa0172110:intron 30.0%
TGACATATATTCAACGATTG+TGG - chr1_4:57053935-57053954 None:intergenic 30.0%
CAAAACAATGTTGATCAATG+AGG + chr1_4:57053953-57053972 Msa0172110:intron 30.0%
TTTGATTACAACAGTCTAGA+AGG + chr1_4:57053992-57054011 Msa0172110:intron 30.0%
AGAAGGTTATAGACGATTAA+AGG + chr1_4:57054009-57054028 Msa0172110:intron 30.0%
AGACGATTAAAGGTCAAATA+CGG + chr1_4:57054019-57054038 Msa0172110:intron 30.0%
TTCATATTACCGATGAAGTA+CGG - chr1_4:57054214-57054233 None:intergenic 30.0%
TAATATGAACAAGTGACCTT+TGG + chr1_4:57054225-57054244 Msa0172110:intron 30.0%
TCAAATAAGACAAACCAAAC+AGG - chr1_4:57054323-57054342 None:intergenic 30.0%
ATCTACTGTTATAAGCTCTA+CGG + chr1_4:57054347-57054366 Msa0172110:intron 30.0%
CTTATTTCCATAAGTTCTTC+AGG + chr1_4:57054370-57054389 Msa0172110:intron 30.0%
! ACAAAGTTGATTGATTCATC+TGG + chr1_4:57054528-57054547 Msa0172110:five_prime_UTR 30.0%
ATGATTCTATTCAGCCAAAT+TGG + chr1_4:57054894-57054913 Msa0172110:CDS 30.0%
TTATGATGCACATGAAAATC+AGG + chr1_4:57055113-57055132 Msa0172110:intron 30.0%
TAATGTAACTAGCTAGTTGT+GGG + chr1_4:57055161-57055180 Msa0172110:intron 30.0%
ATACTATACTTACATGCAGA+TGG - chr1_4:57055266-57055285 None:intergenic 30.0%
AAACGGTTAAGATACATACA+GGG - chr1_4:57055307-57055326 None:intergenic 30.0%
AAATAACAGTAGGTCTCAAA+CGG - chr1_4:57055324-57055343 None:intergenic 30.0%
GTTAAGCGAAAAATAACAGT+AGG - chr1_4:57055334-57055353 None:intergenic 30.0%
AGATCATTAACTTCTTTGGA+TGG - chr1_4:57055476-57055495 None:intergenic 30.0%
AGGAAGATCATTAACTTCTT+TGG - chr1_4:57055480-57055499 None:intergenic 30.0%
AAGGAAAATCTGTAATGAGA+AGG - chr1_4:57055644-57055663 None:intergenic 30.0%
TTGAACTTGATGAAAGTTGA+GGG + chr1_4:57055709-57055728 Msa0172110:CDS 30.0%
! TTTTCACATGATAGATGGTA+AGG - chr1_4:57055735-57055754 None:intergenic 30.0%
AAAAAAAATGTACCTGCAGA+TGG - chr1_4:57055759-57055778 None:intergenic 30.0%
TTTACTTAGGAGCTTCTTTA+TGG + chr1_4:57055781-57055800 Msa0172110:intron 30.0%
TTACTTAGGAGCTTCTTTAT+GGG + chr1_4:57055782-57055801 Msa0172110:intron 30.0%
AAGGTATGTGCAAGTTTATA+CGG + chr1_4:57055892-57055911 Msa0172110:intron 30.0%
TCACAAACAAAACATCTTAC+TGG - chr1_4:57056011-57056030 None:intergenic 30.0%
AAACGGAAATACATAACAAC+TGG - chr1_4:57056148-57056167 None:intergenic 30.0%
GAAGCATGAACATTGAAAAA+CGG - chr1_4:57056165-57056184 None:intergenic 30.0%
! TTATTTCTCCTGTTCTCTTT+AGG + chr1_4:57056206-57056225 Msa0172110:intron 30.0%
TATTTCTCCTGTTCTCTTTA+GGG + chr1_4:57056207-57056226 Msa0172110:intron 30.0%
TATTAAACCCTAAAGAGAAC+AGG - chr1_4:57056217-57056236 None:intergenic 30.0%
TTGGATGAATCAAAGAATAG+TGG + chr1_4:57056271-57056290 Msa0172110:intron 30.0%
!!! CACGTTTTTAAGTCTATAGA+CGG - chr1_4:57056365-57056384 None:intergenic 30.0%
ATTATAGATAAGTAGGGGAT+GGG - chr1_4:57056391-57056410 None:intergenic 30.0%
AATTATAGATAAGTAGGGGA+TGG - chr1_4:57056392-57056411 None:intergenic 30.0%
AAGATATAACCTATGAAACG+TGG + chr1_4:57056534-57056553 Msa0172110:intron 30.0%
TAGTAAACACTAGATCTGTT+CGG - chr1_4:57056573-57056592 None:intergenic 30.0%
! TTAACTCCCCATATTTTGTA+AGG + chr1_4:57056804-57056823 Msa0172110:intron 30.0%
CATCTTCCTTACAAAATATG+GGG - chr1_4:57056813-57056832 None:intergenic 30.0%
GTCATCTTCCTTACAAAATA+TGG - chr1_4:57056815-57056834 None:intergenic 30.0%
AGTTATAATAACAGAGCACA+AGG - chr1_4:57056837-57056856 None:intergenic 30.0%
AATGAAGGTCACGAAAAAAT+TGG + chr1_4:57057022-57057041 Msa0172110:CDS 30.0%
CACGAAAAAATTGGAATCAA+TGG + chr1_4:57057031-57057050 Msa0172110:CDS 30.0%
GTCATAGTCAAAAACAGAAA+GGG - chr1_4:57057279-57057298 None:intergenic 30.0%
AGTCATAGTCAAAAACAGAA+AGG - chr1_4:57057280-57057299 None:intergenic 30.0%
! TGAAACCAAATCACTGATTA+AGG - chr1_4:57057304-57057323 None:intergenic 30.0%
! ACTTAGGGTATAATTTGCAT+TGG + chr1_4:57057339-57057358 Msa0172110:three_prime_UTR 30.0%
GGATGTTTCAACTGTATTTA+GGG + chr1_4:57057438-57057457 Msa0172110:three_prime_UTR 30.0%
AAAACTATACGAGATAGGAA+GGG - chr1_4:57057593-57057612 None:intergenic 30.0%
TAAAACTATACGAGATAGGA+AGG - chr1_4:57057594-57057613 None:intergenic 30.0%
GTGATAAAACTATACGAGAT+AGG - chr1_4:57057598-57057617 None:intergenic 30.0%
AGGAAGAAGAAGAAGAAGAA+GGG - chr1_4:57053307-57053326 None:intergenic 35.0%
AAGGAAGAAGAAGAAGAAGA+AGG - chr1_4:57053308-57053327 None:intergenic 35.0%
!!! ATGAATGCTTGTTTTGCAAG+TGG - chr1_4:57053598-57053617 None:intergenic 35.0%
GTCTGACACTAATATGATGT+TGG + chr1_4:57053723-57053742 Msa0172110:five_prime_UTR 35.0%
! TGTTTAACCACTCTTTGGAA+TGG + chr1_4:57053797-57053816 Msa0172110:intron 35.0%
ATGATCGCCAATCATACAAT+TGG - chr1_4:57054272-57054291 None:intergenic 35.0%
AAGCTATCCTGAAGAACTTA+TGG - chr1_4:57054380-57054399 None:intergenic 35.0%
! AATTCCAACATCAGAAGTGT+TGG + chr1_4:57054614-57054633 Msa0172110:CDS 35.0%
!! TTTCTGAAGCAGAGGAAAAA+TGG - chr1_4:57054679-57054698 None:intergenic 35.0%
!! AGAATGTATTTCTGAAGCAG+AGG - chr1_4:57054687-57054706 None:intergenic 35.0%
! ACATAACGTCACTTTCTTGA+GGG - chr1_4:57054718-57054737 None:intergenic 35.0%
AATGACCATGTGGAATACAA+TGG + chr1_4:57054797-57054816 Msa0172110:CDS 35.0%
!! ATACAATGGTTCTGAAGTCT+TGG + chr1_4:57054811-57054830 Msa0172110:CDS 35.0%
!! TACAATGGTTCTGAAGTCTT+GGG + chr1_4:57054812-57054831 Msa0172110:CDS 35.0%
CCAAATTGGAATGAACTTCT+CGG + chr1_4:57054908-57054927 Msa0172110:CDS 35.0%
TATGACAGAACCAAAATCAC+AGG + chr1_4:57054940-57054959 Msa0172110:CDS 35.0%
CATGTGCATCATAAACTAGT+CGG - chr1_4:57055107-57055126 None:intergenic 35.0%
GTAATGTAACTAGCTAGTTG+TGG + chr1_4:57055160-57055179 Msa0172110:intron 35.0%
!! TGATTTGCTTTGGTGCATTT+AGG + chr1_4:57055199-57055218 Msa0172110:intron 35.0%
CAAACGGTTAAGATACATAC+AGG - chr1_4:57055308-57055327 None:intergenic 35.0%
! CTCATGGTGTTAATATGTAG+AGG + chr1_4:57055669-57055688 Msa0172110:intron 35.0%
CTTGAACTTGATGAAAGTTG+AGG + chr1_4:57055708-57055727 Msa0172110:CDS 35.0%
! ATGGCTTTTCACATGATAGA+TGG - chr1_4:57055740-57055759 None:intergenic 35.0%
!!! TATGGGTGTGTTTTAATCGA+AGG + chr1_4:57055799-57055818 Msa0172110:intron 35.0%
TTCAGAAATATAGAACTGCC+AGG + chr1_4:57055850-57055869 Msa0172110:intron 35.0%
TACAAACCAGAATCATCAGA+AGG + chr1_4:57055873-57055892 Msa0172110:CDS 35.0%
ACATCTTACTGGAGACATTA+CGG - chr1_4:57056000-57056019 None:intergenic 35.0%
TGTTAAAGGAGTTGAAGGAT+CGG - chr1_4:57056111-57056130 None:intergenic 35.0%
TCCTTCAACTCCTTTAACAT+TGG + chr1_4:57056112-57056131 Msa0172110:intron 35.0%
CCTTCAACTCCTTTAACATT+GGG + chr1_4:57056113-57056132 Msa0172110:intron 35.0%
AACTCCTTTAACATTGGGAT+AGG + chr1_4:57056118-57056137 Msa0172110:intron 35.0%
TTTGCCTATCCCAATGTTAA+AGG - chr1_4:57056125-57056144 None:intergenic 35.0%
!! GGATATGCACCAATTTGTTT+TGG + chr1_4:57056252-57056271 Msa0172110:intron 35.0%
ATTGAAGTCAACTTCTTCTC+TGG - chr1_4:57056332-57056351 None:intergenic 35.0%
CAATTGAGAGATGTCATTGT+TGG - chr1_4:57056447-57056466 None:intergenic 35.0%
ATATTGGAAACGAGGACAAT+AGG - chr1_4:57056606-57056625 None:intergenic 35.0%
AACTGTACATATTGGAAACG+AGG - chr1_4:57056614-57056633 None:intergenic 35.0%
ATTAATGTCTAGAGACGCTT+TGG + chr1_4:57056634-57056653 Msa0172110:intron 35.0%
AGATTCAGATTGAGAACCAA+GGG + chr1_4:57056894-57056913 Msa0172110:CDS 35.0%
AATACAAGCACAGAGCAAAA+GGG + chr1_4:57057091-57057110 Msa0172110:CDS 35.0%
AAATACTAGATGCCTTCACA+GGG - chr1_4:57057227-57057246 None:intergenic 35.0%
GACTTCCTTAATCAGTGATT+TGG + chr1_4:57057296-57057315 Msa0172110:three_prime_UTR 35.0%
GGGATGTTTCAACTGTATTT+AGG + chr1_4:57057437-57057456 Msa0172110:three_prime_UTR 35.0%
TCGGAAGTTTACTTCTCAAA+AGG - chr1_4:57057540-57057559 None:intergenic 35.0%
TGCTTACTTTATTCTCGTGT+TGG + chr1_4:57057643-57057662 Msa0172110:three_prime_UTR 35.0%
TATTCTTACGTCCGCTCATT+CGG + chr1_4:57053203-57053222 Msa0172110:five_prime_UTR 40.0%
CTTCTTCTTCTTCCTTCGTA+AGG + chr1_4:57053312-57053331 Msa0172110:five_prime_UTR 40.0%
ATAGTGATCGAACCTTACGA+AGG - chr1_4:57053327-57053346 None:intergenic 40.0%
ATAGGAGGCTATAAGCTTCT+AGG - chr1_4:57053677-57053696 None:intergenic 40.0%
TAATCCTCATGCTTCATAGG+AGG - chr1_4:57053692-57053711 None:intergenic 40.0%
TCCTATGAAGCATGAGGATT+AGG + chr1_4:57053691-57053710 Msa0172110:five_prime_UTR 40.0%
GTTATACGAGTGTGTCATAC+AGG - chr1_4:57053832-57053851 None:intergenic 40.0%
GATACACCATAGACATTCCT+TGG + chr1_4:57053903-57053922 Msa0172110:intron 40.0%
ATGTGTCCAAGGAATGTCTA+TGG - chr1_4:57053912-57053931 None:intergenic 40.0%
CGATTAAAGGTCAAATACGG+TGG + chr1_4:57054022-57054041 Msa0172110:intron 40.0%
AATAGACGAAGACATAGCTC+TGG - chr1_4:57054564-57054583 None:intergenic 40.0%
GAGGAAAAATGGACGTTATC+AGG - chr1_4:57054668-57054687 None:intergenic 40.0%
! GACATAACGTCACTTTCTTG+AGG - chr1_4:57054719-57054738 None:intergenic 40.0%
AAGAAAGTGACGTTATGTCC+TGG + chr1_4:57054720-57054739 Msa0172110:CDS 40.0%
AGAAAGTGACGTTATGTCCT+GGG + chr1_4:57054721-57054740 Msa0172110:CDS 40.0%
GTATTCCACATGGTCATTCT+GGG - chr1_4:57054795-57054814 None:intergenic 40.0%
TGTATTCCACATGGTCATTC+TGG - chr1_4:57054796-57054815 None:intergenic 40.0%
CAGAACCATTGTATTCCACA+TGG - chr1_4:57054805-57054824 None:intergenic 40.0%
! TGCCAAAACAACGGATTTCA+AGG + chr1_4:57054841-57054860 Msa0172110:CDS 40.0%
! CTCCTTGAAATCCGTTGTTT+TGG - chr1_4:57054846-57054865 None:intergenic 40.0%
! AAACAACGGATTTCAAGGAG+TGG + chr1_4:57054846-57054865 Msa0172110:CDS 40.0%
! AACAACGGATTTCAAGGAGT+GGG + chr1_4:57054847-57054866 Msa0172110:CDS 40.0%
CCGAGAAGTTCATTCCAATT+TGG - chr1_4:57054911-57054930 None:intergenic 40.0%
CTAGAATATGTGGATGGCAT+TGG + chr1_4:57055035-57055054 Msa0172110:intron 40.0%
TGGCATCTTGTTCCTCTATA+TGG + chr1_4:57055055-57055074 Msa0172110:intron 40.0%
CTTGTTCCTCTATATGGTTG+AGG + chr1_4:57055061-57055080 Msa0172110:intron 40.0%
CACATGAAAATCAGGTCAAG+TGG + chr1_4:57055121-57055140 Msa0172110:intron 40.0%
GAAAATCAGGTCAAGTGGTA+TGG + chr1_4:57055126-57055145 Msa0172110:intron 40.0%
ATGCACCAAAGCAAATCATG+CGG - chr1_4:57055197-57055216 None:intergenic 40.0%
TAAGATACATACAGGGCAAG+AGG - chr1_4:57055300-57055319 None:intergenic 40.0%
TCTCTTGCATCAAGAGAGAA+GGG - chr1_4:57055418-57055437 None:intergenic 40.0%
GTAGTCGACACAGAAGAATT+AGG - chr1_4:57055500-57055519 None:intergenic 40.0%
AATCTAAGCCTAGAATGCGT+TGG + chr1_4:57055525-57055544 Msa0172110:CDS 40.0%
ATATGTAGAGGCTACTCCTA+AGG + chr1_4:57055681-57055700 Msa0172110:intron 40.0%
TATGTAGAGGCTACTCCTAA+GGG + chr1_4:57055682-57055701 Msa0172110:intron 40.0%
ATCAAGTTCAAGACACCCTT+AGG - chr1_4:57055700-57055719 None:intergenic 40.0%
!! TGATGATTCTGGTTTGTACC+TGG - chr1_4:57055871-57055890 None:intergenic 40.0%
CACATACCTTCTGATGATTC+TGG - chr1_4:57055882-57055901 None:intergenic 40.0%
GTATGTGCAAGTTTATACGG+AGG + chr1_4:57055895-57055914 Msa0172110:intron 40.0%
CATCTTACTGGAGACATTAC+GGG - chr1_4:57055999-57056018 None:intergenic 40.0%
TTAAAGGAGTTGAAGGATCG+GGG - chr1_4:57056109-57056128 None:intergenic 40.0%
GTTAAAGGAGTTGAAGGATC+GGG - chr1_4:57056110-57056129 None:intergenic 40.0%
CCCAATGTTAAAGGAGTTGA+AGG - chr1_4:57056116-57056135 None:intergenic 40.0%
!!! ACATTTTTTTCCCTGCCTAC+AGG + chr1_4:57056302-57056321 Msa0172110:intron 40.0%
!! TTCTTCTCTGGAATTCCTGT+AGG - chr1_4:57056320-57056339 None:intergenic 40.0%
!! GTTTTTAGGCCACGTTTCAT+AGG - chr1_4:57056546-57056565 None:intergenic 40.0%
! ATCTGTTCGGCTCAGTTTTT+AGG - chr1_4:57056560-57056579 None:intergenic 40.0%
! GCTTTGGATTGTGGTTGTAT+AGG + chr1_4:57056650-57056669 Msa0172110:intron 40.0%
ATTGTGGTTGTATAGGCCTA+AGG + chr1_4:57056657-57056676 Msa0172110:intron 40.0%
TTGTGGTTGTATAGGCCTAA+GGG + chr1_4:57056658-57056677 Msa0172110:intron 40.0%
AATGCTTCTGTAATCCCCTT+AGG - chr1_4:57056676-57056695 None:intergenic 40.0%
AGATCACACAGAAAACACAG+TGG - chr1_4:57056765-57056784 None:intergenic 40.0%
TCTGTGTGATCTTTGTGTGA+AGG + chr1_4:57056773-57056792 Msa0172110:intron 40.0%
CAGATTCAGATTGAGAACCA+AGG + chr1_4:57056893-57056912 Msa0172110:CDS 40.0%
GTTTGAGCAACAGATGAAGT+CGG + chr1_4:57056934-57056953 Msa0172110:CDS 40.0%
TTGCTCTGTGCTTGTATTCT+GGG - chr1_4:57057089-57057108 None:intergenic 40.0%
TTTGCTCTGTGCTTGTATTC+TGG - chr1_4:57057090-57057109 None:intergenic 40.0%
GAATACAAGCACAGAGCAAA+AGG + chr1_4:57057090-57057109 Msa0172110:CDS 40.0%
! TCAGTCTTCACTCGTTTTGT+GGG - chr1_4:57057175-57057194 None:intergenic 40.0%
AAGAATTTCCAACCCTGTGA+AGG + chr1_4:57057212-57057231 Msa0172110:three_prime_UTR 40.0%
GAAATACTAGATGCCTTCAC+AGG - chr1_4:57057228-57057247 None:intergenic 40.0%
TGCTTCTACATACAACATGC+TGG + chr1_4:57057248-57057267 Msa0172110:three_prime_UTR 40.0%
ACATTTCTTGTCCTCGACTT+AGG + chr1_4:57057323-57057342 Msa0172110:three_prime_UTR 40.0%
CATTTCTTGTCCTCGACTTA+GGG + chr1_4:57057324-57057343 Msa0172110:three_prime_UTR 40.0%
GCAAATTATACCCTAAGTCG+AGG - chr1_4:57057337-57057356 None:intergenic 40.0%
!! TAGAAGCATTGTTGGATCGA+GGG + chr1_4:57057417-57057436 Msa0172110:three_prime_UTR 40.0%
AGGATGAGAAGAGATTGTAG+AGG - chr1_4:57057520-57057539 None:intergenic 40.0%
AAGGGAGATCAAAGGGAAAA+AGG - chr1_4:57057575-57057594 None:intergenic 40.0%
AGATAGGAAGGGAGATCAAA+GGG - chr1_4:57057582-57057601 None:intergenic 40.0%
ATAGCCTCCTATGAAGCATG+AGG + chr1_4:57053685-57053704 Msa0172110:five_prime_UTR 45.0%
GCCTAATCCTCATGCTTCAT+AGG - chr1_4:57053695-57053714 None:intergenic 45.0%
ACACACTCGTATAACACGTG+TGG + chr1_4:57053837-57053856 Msa0172110:intron 45.0%
CACACTCGTATAACACGTGT+GGG + chr1_4:57053838-57053857 Msa0172110:intron 45.0%
AACGATTGTGGATGTGTCCA+AGG - chr1_4:57053923-57053942 None:intergenic 45.0%
TGTCGTAGTCCGTACTTCAT+CGG + chr1_4:57054202-57054221 Msa0172110:intron 45.0%
CATTAGCGTTTGAGCCTGTT+TGG + chr1_4:57054306-57054325 Msa0172110:intron 45.0%
GTGTCCAACACTTCTGATGT+TGG - chr1_4:57054621-57054640 None:intergenic 45.0%
GTTATCAGGCTGTTCAGAAG+GGG - chr1_4:57054654-57054673 None:intergenic 45.0%
CGTTATCAGGCTGTTCAGAA+GGG - chr1_4:57054655-57054674 None:intergenic 45.0%
ACGTTATCAGGCTGTTCAGA+AGG - chr1_4:57054656-57054675 None:intergenic 45.0%
GAAAGTGACGTTATGTCCTG+GGG + chr1_4:57054722-57054741 Msa0172110:CDS 45.0%
TTCAAATGGATCAGTTCCCC+AGG - chr1_4:57054741-57054760 None:intergenic 45.0%
TTCTGGGTGGGAACATTATC+AGG - chr1_4:57054779-57054798 None:intergenic 45.0%
!! AATGGTTCTGAAGTCTTGGG+TGG + chr1_4:57054815-57054834 Msa0172110:CDS 45.0%
GGGTGGAAATGCCAAAACAA+CGG + chr1_4:57054832-57054851 Msa0172110:CDS 45.0%
CACGATCCTCAACCATATAG+AGG - chr1_4:57055070-57055089 None:intergenic 45.0%
CTCTATATGGTTGAGGATCG+TGG + chr1_4:57055068-57055087 Msa0172110:intron 45.0%
ATACAGGGCAAGAGGAAAGA+GGG - chr1_4:57055292-57055311 None:intergenic 45.0%
CTCTTGCATCAAGAGAGAAG+GGG - chr1_4:57055417-57055436 None:intergenic 45.0%
GTCTCTTGCATCAAGAGAGA+AGG - chr1_4:57055419-57055438 None:intergenic 45.0%
ATACTGCTGCTGTGAAACCT+GGG - chr1_4:57055441-57055460 None:intergenic 45.0%
TATACTGCTGCTGTGAAACC+TGG - chr1_4:57055442-57055461 None:intergenic 45.0%
TTGGACTCCAGAACTTCATG+AGG + chr1_4:57055544-57055563 Msa0172110:CDS 45.0%
ACAAAGGCCTCATGAAGTTC+TGG - chr1_4:57055554-57055573 None:intergenic 45.0%
AGAACTTCATGAGGCCTTTG+TGG + chr1_4:57055553-57055572 Msa0172110:CDS 45.0%
CTGATTGACTGCTTCCACAA+AGG - chr1_4:57055570-57055589 None:intergenic 45.0%
TCATGTGAAAAGCCATCTGC+AGG + chr1_4:57055744-57055763 Msa0172110:CDS 45.0%
! TCTAGAGACGCTTTGGATTG+TGG + chr1_4:57056641-57056660 Msa0172110:intron 45.0%
TGTGGTTGTATAGGCCTAAG+GGG + chr1_4:57056659-57056678 Msa0172110:intron 45.0%
!! AGGGGATTACAGAAGCATTG+CGG + chr1_4:57056677-57056696 Msa0172110:CDS 45.0%
TCATCTGTAGATGCTTCCCT+TGG - chr1_4:57056913-57056932 None:intergenic 45.0%
!! ACACTTGATAGTGGAGCAGA+AGG - chr1_4:57056965-57056984 None:intergenic 45.0%
TTCTGCTCCACTATCAAGTG+TGG + chr1_4:57056964-57056983 Msa0172110:CDS 45.0%
GATAGTGCCACACTTGATAG+TGG - chr1_4:57056974-57056993 None:intergenic 45.0%
ACTTCAGACAACATGCCAGA+AGG + chr1_4:57057058-57057077 Msa0172110:CDS 45.0%
! GTATTCTGGGAACTTCCTTC+TGG - chr1_4:57057076-57057095 None:intergenic 45.0%
GGAGATGATGCTAAAGCTAC+CGG + chr1_4:57057112-57057131 Msa0172110:CDS 45.0%
! GTCAGTCTTCACTCGTTTTG+TGG - chr1_4:57057176-57057195 None:intergenic 45.0%
!! GGAGCTTCTAGAAGCATTGT+TGG + chr1_4:57057409-57057428 Msa0172110:three_prime_UTR 45.0%
!! CTAGAAGCATTGTTGGATCG+AGG + chr1_4:57057416-57057435 Msa0172110:three_prime_UTR 45.0%
GAGATAGGAAGGGAGATCAA+AGG - chr1_4:57057583-57057602 None:intergenic 45.0%
!!! AATTAATTATTTTAATGAAT+AGG + chr1_4:57055379-57055398 Msa0172110:intron 5.0%
!!! TATTTAATTTTTCTTTTTAT+AGG + chr1_4:57056031-57056050 Msa0172110:intron 5.0%
TGAGCGGACGTAAGAATACG+AGG - chr1_4:57053201-57053220 None:intergenic 50.0%
TGTCTCATGAGCCGAATGAG+CGG - chr1_4:57053217-57053236 None:intergenic 50.0%
TCGGACACCATTCCAAAGAG+TGG - chr1_4:57053807-57053826 None:intergenic 50.0%
CGAGTGTGTCATACAGGTGT+CGG - chr1_4:57053826-57053845 None:intergenic 50.0%
!! GAAGACATAGCTCTGGTCGA+AGG - chr1_4:57054557-57054576 None:intergenic 50.0%
TATTCCCTCTTCCTCGATGC+AGG + chr1_4:57054580-57054599 Msa0172110:CDS 50.0%
AATTGATGCAGCCTGCATCG+AGG - chr1_4:57054594-57054613 None:intergenic 50.0%
TCCACATGGTCATTCTGGGT+GGG - chr1_4:57054791-57054810 None:intergenic 50.0%
TTCCACATGGTCATTCTGGG+TGG - chr1_4:57054792-57054811 None:intergenic 50.0%
CATACAGGGCAAGAGGAAAG+AGG - chr1_4:57055293-57055312 None:intergenic 50.0%
TCTCTTGATGCAAGAGACCC+AGG + chr1_4:57055421-57055440 Msa0172110:CDS 50.0%
! TCTGGAGTCCAACGCATTCT+AGG - chr1_4:57055536-57055555 None:intergenic 50.0%
GTGGAAGCAGTCAATCAGCT+TGG + chr1_4:57055572-57055591 Msa0172110:CDS 50.0%
GAAGCAGTCAATCAGCTTGG+TGG + chr1_4:57055575-57055594 Msa0172110:CDS 50.0%
AAGGATCGGGGTTCAAACTC+CGG - chr1_4:57056097-57056116 None:intergenic 50.0%
!! CTCTGGAATTCCTGTAGGCA+GGG - chr1_4:57056315-57056334 None:intergenic 50.0%
!! TCTCTGGAATTCCTGTAGGC+AGG - chr1_4:57056316-57056335 None:intergenic 50.0%
TGCAGATGGAACTCCAGAAG+CGG + chr1_4:57056701-57056720 Msa0172110:CDS 50.0%
GTTGTTCATGAAGCCGCTTC+TGG - chr1_4:57056717-57056736 None:intergenic 50.0%
GCGGCTTCATGAACAACTTG+AGG + chr1_4:57056720-57056739 Msa0172110:CDS 50.0%
TTCTCCCAGCTCAAGTTCAC+CGG - chr1_4:57057134-57057153 None:intergenic 50.0%
! GTCTTCACTCGTTTTGTGGG+TGG - chr1_4:57057172-57057191 None:intergenic 50.0%
ACTAGATGCCTTCACAGGGT+TGG - chr1_4:57057223-57057242 None:intergenic 50.0%
TCCCACCCAGAATGACCATG+TGG + chr1_4:57054787-57054806 Msa0172110:CDS 55.0%
!! GAGCGCCGCATGATTTGCTT+TGG + chr1_4:57055189-57055208 Msa0172110:intron 55.0%
!! AGAAGCATTGCGGCTGCAGA+TGG + chr1_4:57056687-57056706 Msa0172110:CDS 55.0%
AGCTACCGGTGAACTTGAGC+TGG + chr1_4:57057126-57057145 Msa0172110:CDS 55.0%
GCTACCGGTGAACTTGAGCT+GGG + chr1_4:57057127-57057146 Msa0172110:CDS 55.0%
TTGTGGGTGGTGCGGTAAGT+TGG - chr1_4:57057159-57057178 None:intergenic 55.0%
! CACTCGTTTTGTGGGTGGTG+CGG - chr1_4:57057167-57057186 None:intergenic 55.0%
GCAGCCTGCATCGAGGAAGA+GGG - chr1_4:57054587-57054606 None:intergenic 60.0%
TGCAGCCTGCATCGAGGAAG+AGG - chr1_4:57054588-57054607 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 57053183 57057693 57053183 ID=Msa0172110;Name=Msa0172110
chr1_4 mRNA 57053183 57057693 57053183 ID=Msa0172110-mRNA-1;Parent=Msa0172110;Name=Msa0172110-mRNA-1;_AED=0.20;_eAED=0.20;_QI=271|1|1|1|0.75|0.66|9|492|388
chr1_4 exon 57053183 57053333 57053183 ID=Msa0172110-mRNA-1:exon:17387;Parent=Msa0172110-mRNA-1
chr1_4 exon 57053671 57053744 57053671 ID=Msa0172110-mRNA-1:exon:17388;Parent=Msa0172110-mRNA-1
chr1_4 exon 57054523 57054961 57054523 ID=Msa0172110-mRNA-1:exon:17389;Parent=Msa0172110-mRNA-1
chr1_4 exon 57055401 57055605 57055401 ID=Msa0172110-mRNA-1:exon:17390;Parent=Msa0172110-mRNA-1
chr1_4 exon 57055689 57055765 57055689 ID=Msa0172110-mRNA-1:exon:17391;Parent=Msa0172110-mRNA-1
chr1_4 exon 57055855 57055894 57055855 ID=Msa0172110-mRNA-1:exon:17392;Parent=Msa0172110-mRNA-1
chr1_4 exon 57056324 57056381 57056324 ID=Msa0172110-mRNA-1:exon:17393;Parent=Msa0172110-mRNA-1
chr1_4 exon 57056672 57056741 57056672 ID=Msa0172110-mRNA-1:exon:17394;Parent=Msa0172110-mRNA-1
chr1_4 exon 57056878 57057693 57056878 ID=Msa0172110-mRNA-1:exon:17395;Parent=Msa0172110-mRNA-1
chr1_4 five_prime_UTR 57053183 57053333 57053183 ID=Msa0172110-mRNA-1:five_prime_utr;Parent=Msa0172110-mRNA-1
chr1_4 five_prime_UTR 57053671 57053744 57053671 ID=Msa0172110-mRNA-1:five_prime_utr;Parent=Msa0172110-mRNA-1
chr1_4 five_prime_UTR 57054523 57054568 57054523 ID=Msa0172110-mRNA-1:five_prime_utr;Parent=Msa0172110-mRNA-1
chr1_4 CDS 57054569 57054961 57054569 ID=Msa0172110-mRNA-1:cds;Parent=Msa0172110-mRNA-1
chr1_4 CDS 57055401 57055605 57055401 ID=Msa0172110-mRNA-1:cds;Parent=Msa0172110-mRNA-1
chr1_4 CDS 57055689 57055765 57055689 ID=Msa0172110-mRNA-1:cds;Parent=Msa0172110-mRNA-1
chr1_4 CDS 57055855 57055894 57055855 ID=Msa0172110-mRNA-1:cds;Parent=Msa0172110-mRNA-1
chr1_4 CDS 57056324 57056381 57056324 ID=Msa0172110-mRNA-1:cds;Parent=Msa0172110-mRNA-1
chr1_4 CDS 57056672 57056741 57056672 ID=Msa0172110-mRNA-1:cds;Parent=Msa0172110-mRNA-1
chr1_4 CDS 57056878 57057201 57056878 ID=Msa0172110-mRNA-1:cds;Parent=Msa0172110-mRNA-1
chr1_4 three_prime_UTR 57057202 57057693 57057202 ID=Msa0172110-mRNA-1:three_prime_utr;Parent=Msa0172110-mRNA-1
Gene Sequence

>Msa0172110

ATGTCTTCGTCTATTCCCTCTTCCTCGATGCAGGCTGCATCAATTAATTCCAACATCAGAAGTGTTGGACACATGTTTTCAACCCCTTCTGAACAGCCTGATAACGTCCATTTTTCCTCTGCTTCAGAAATACATTCTATGACATTCCCTCAAGAAAGTGACGTTATGTCCTGGGGAACTGATCCATTTGAAGATATTCTTCAATTTCCTGATAATGTTCCCACCCAGAATGACCATGTGGAATACAATGGTTCTGAAGTCTTGGGTGGAAATGCCAAAACAACGGATTTCAAGGAGTGGGTTGATCAGTTGATGTCAGTCGATGATGATTCTATTCAGCCAAATTGGAATGAACTTCTCGGTGATAACAATATGACAGAACCAAAATCACAGGATGCACAAATGTCCCCTTCTCTCTTGATGCAAGAGACCCAGGTTTCACAGCAGCAGTATATACTATCACTACCATCCAAAGAAGTTAATGATCTTCCTAATTCTTCTGTGTCGACTACATCGCAATCTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTTGTGGAAGCAGTCAATCAGCTTGGTGGTAGTGAGAAGGCTACTCCTAAGGGTGTCTTGAACTTGATGAAAGTTGAGGGCCTTACCATCTATCATGTGAAAAGCCATCTGCAGAAATATAGAACTGCCAGGTACAAACCAGAATCATCAGAAGGAATTCCAGAGAAGAAGTTGACTTCAATCGACGAAATGCCGTCTATAGACTTAAAAACGCCTAAGGGGATTACAGAAGCATTGCGGCTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAATTTACAGATTCAGATTGAGAACCAAGGGAAGCATCTACAGATGATGTTTGAGCAACAGATGAAGTCGGATGAGCCTTCTGCTCCACTATCAAGTGTGGCACTATCTTCTCCAGTTGAAAATTTAGAAAACACAAATGAAGGTCACGAAAAAATTGGAATCAATGGCAGCACTTCAGACAACATGCCAGAAGGAAGTTCCCAGAATACAAGCACAGAGCAAAAGGGAGATGATGCTAAAGCTACCGGTGAACTTGAGCTGGGAGAAGACCAACTTACCGCACCACCCACAAAACGAGTGAAGACTGACAAGTAG
Protein sequence

>Msa0172110

MSSSIPSSSMQAASINSNIRSVGHMFSTPSEQPDNVHFSSASEIHSMTFPQESDVMSWGTDPFEDILQFPDNVPTQNDHVEYNGSEVLGGNAKTTDFKEWVDQLMSVDDDSIQPNWNELLGDNNMTEPKSQDAQMSPSLLMQETQVSQQQYILSLPSKEVNDLPNSSVSTTSQSKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPESSEGIPEKKLTSIDEMPSIDLKTPKGITEALRLQMELQKRLHEQLEIQRNLQIQIENQGKHLQMMFEQQMKSDEPSAPLSSVALSSPVENLENTNEGHEKIGINGSTSDNMPEGSSQNTSTEQKGDDAKATGELELGEDQLTAPPTKRVKTDK*