Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982130 | XP_013456231.1 | 97.094 | 413 | 12 | 0 | 1 | 413 | 1 | 413 | 0.0 | 829 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982130 | sp|Q8RWR1|JMJ30_ARATH | 69.882 | 425 | 110 | 5 | 4 | 411 | 5 | 428 | 0.0 | 597 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982130 | A0A072UKM1 | 97.094 | 413 | 12 | 0 | 1 | 413 | 1 | 413 | 0.0 | 829 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026680 | Msa0982130 | 0.811412 | 7.090958e-51 | -8.615850e-47 |
| Msa0604010 | Msa0982130 | 0.916134 | 2.565598e-85 | -8.615850e-47 |
| Msa0646580 | Msa0982130 | 0.808155 | 3.557940e-50 | -8.615850e-47 |
| Msa0684780 | Msa0982130 | 0.815054 | 1.125182e-51 | -8.615850e-47 |
| Msa0688120 | Msa0982130 | 0.845977 | 2.899277e-59 | -8.615850e-47 |
| Msa0708930 | Msa0982130 | 0.831026 | 2.107213e-55 | -8.615850e-47 |
| Msa0717230 | Msa0982130 | -0.812616 | 3.875936e-51 | -8.615850e-47 |
| Msa0724140 | Msa0982130 | -0.816602 | 5.081332e-52 | -8.615850e-47 |
| Msa0764680 | Msa0982130 | -0.838370 | 2.994836e-57 | -8.615850e-47 |
| Msa0799680 | Msa0982130 | -0.818015 | 2.443488e-52 | -8.615850e-47 |
| Msa0375310 | Msa0982130 | 0.821021 | 5.037127e-53 | -8.615850e-47 |
| Msa0381500 | Msa0982130 | 0.809001 | 2.348054e-50 | -8.615850e-47 |
| Msa0402210 | Msa0982130 | 0.836816 | 7.496178e-57 | -8.615850e-47 |
| Msa0421500 | Msa0982130 | 0.818076 | 2.367187e-52 | -8.615850e-47 |
| Msa0350070 | Msa0982130 | -0.803545 | 3.312670e-49 | -8.615850e-47 |
| Msa0355140 | Msa0982130 | 0.839866 | 1.226018e-57 | -8.615850e-47 |
| Msa0483770 | Msa0982130 | 0.848597 | 5.539787e-60 | -8.615850e-47 |
| Msa0513990 | Msa0982130 | 0.828024 | 1.131243e-54 | -8.615850e-47 |
| Msa0550120 | Msa0982130 | 0.825407 | 4.766798e-54 | -8.615850e-47 |
| Msa0844220 | Msa0982130 | -0.822175 | 2.725645e-53 | -8.615850e-47 |
| Msa0968610 | Msa0982130 | 0.801485 | 8.804779e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982130 | MtrunA17_Chr4g0033081 | 97.094 | 413 | 12 | 0 | 1 | 413 | 1 | 413 | 0.0 | 829 |
| Msa0982130 | MtrunA17_Chr1g0185111 | 37.500 | 160 | 84 | 6 | 263 | 410 | 138 | 293 | 1.13e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0982130 | AT3G20810.1 | 71.739 | 414 | 110 | 4 | 4 | 411 | 5 | 417 | 0.0 | 605 |
| Msa0982130 | AT3G20810.2 | 69.882 | 425 | 110 | 5 | 4 | 411 | 5 | 428 | 0.0 | 597 |
| Msa0982130 | AT3G20810.3 | 71.066 | 394 | 108 | 3 | 4 | 392 | 5 | 397 | 0.0 | 577 |
| Msa0982130 | AT3G20810.5 | 68.807 | 327 | 96 | 3 | 4 | 325 | 5 | 330 | 3.42e-159 | 452 |
| Msa0982130 | AT3G20810.4 | 69.255 | 322 | 93 | 3 | 4 | 320 | 5 | 325 | 1.83e-157 | 449 |
| Msa0982130 | AT5G19840.1 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 4.39e-23 | 101 |
| Msa0982130 | AT5G19840.2 | 29.562 | 274 | 141 | 10 | 176 | 404 | 15 | 281 | 4.78e-23 | 101 |
| Msa0982130 | AT3G45880.1 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 9.58e-12 | 66.2 |
| Msa0982130 | AT3G45880.2 | 25.168 | 298 | 151 | 11 | 166 | 404 | 16 | 300 | 9.82e-12 | 66.2 |
Find 117 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGATATGGGGATTATTA+TGG | 0.186608 | 6_4:-21771219 | Msa0982130:CDS |
| GGCGCTTAGGGCTTTGGATA+TGG | 0.208142 | 6_4:-21771231 | Msa0982130:CDS |
| TTTGAATACCTGATCAAATA+AGG | 0.226160 | 6_4:+21768157 | None:intergenic |
| CTACATTTCATTATTGATAA+TGG | 0.228293 | 6_4:-21766505 | Msa0982130:three_prime_UTR |
| CAGCCAGGTAATGATCTTTC+AGG | 0.278024 | 6_4:+21769475 | None:intergenic |
| AATGGGAGGTGTAAAGATTT+TGG | 0.296847 | 6_4:-21771119 | Msa0982130:CDS |
| AGGTTGGTTAAGGTTGATAA+TGG | 0.314847 | 6_4:-21771137 | Msa0982130:CDS |
| TCCTTGGCACTCGGTGTTGC+CGG | 0.319116 | 6_4:-21771327 | Msa0982130:CDS |
| CCAGTTTATCAGTTAGCTTT+TGG | 0.327040 | 6_4:-21766580 | Msa0982130:CDS |
| TAAAGAGGCGCTTAGGGCTT+TGG | 0.336994 | 6_4:-21771237 | Msa0982130:CDS |
| GGCGCGAATGTCGCCGGCGG+CGG | 0.341012 | 6_4:+21771394 | None:intergenic |
| TTCTGCTGTTGCGAAGGTTT+CGG | 0.341954 | 6_4:-21771168 | Msa0982130:CDS |
| GCGAAATGTTGCTATGAAAA+TGG | 0.343431 | 6_4:-21771266 | Msa0982130:CDS |
| TTGGATATGGGGATTATTAT+GGG | 0.343770 | 6_4:-21771218 | Msa0982130:CDS |
| CCAAAAGCTAACTGATAAAC+TGG | 0.357343 | 6_4:+21766580 | None:intergenic |
| AATTCCAAGTCTTGCACCTT+AGG | 0.363637 | 6_4:+21766680 | None:intergenic |
| GAGTTTGCTTAGGAAGGATT+TGG | 0.366501 | 6_4:-21771192 | Msa0982130:CDS |
| GATTACTTGCAAAGAGTTGC+TGG | 0.375148 | 6_4:-21769387 | Msa0982130:CDS |
| GTTTCACACTTCCAGGTTGT+TGG | 0.378528 | 6_4:-21767391 | Msa0982130:intron |
| AGATCTCTCAATGCTTGGTT+TGG | 0.381952 | 6_4:-21767972 | Msa0982130:CDS |
| GCGCTTAGGGCTTTGGATAT+GGG | 0.383753 | 6_4:-21771230 | Msa0982130:CDS |
| GAGAGTTTAAAGAGGCGCTT+AGG | 0.392198 | 6_4:-21771244 | Msa0982130:CDS |
| TTTGAAGCAAGGGACTTAAC+AGG | 0.394352 | 6_4:+21769537 | None:intergenic |
| AGCAGCTGCACTCCGGTCCT+TGG | 0.396639 | 6_4:-21771343 | Msa0982130:CDS |
| TTTCACACTTCCAGGTTGTT+GGG | 0.399540 | 6_4:-21767390 | Msa0982130:intron |
| ATGCAGTCACTGATGATAAC+TGG | 0.402831 | 6_4:+21769447 | None:intergenic |
| TGCTGGTGACCGCACTGTTC+CGG | 0.405682 | 6_4:-21769370 | Msa0982130:CDS |
| TCAGCATCCCTTATTTGATC+AGG | 0.417700 | 6_4:-21768165 | Msa0982130:intron |
| GGAGAAAGCGAGGTTGGTTA+AGG | 0.420028 | 6_4:-21771147 | Msa0982130:CDS |
| AAAACTATTTATGTGCAGAT+TGG | 0.423646 | 6_4:-21768271 | Msa0982130:CDS |
| AATGCTTGGTTTGGTCCAGC+TGG | 0.430502 | 6_4:-21767963 | Msa0982130:CDS |
| TTCTGCGGCGCGAATGTCGC+CGG | 0.434979 | 6_4:+21771388 | None:intergenic |
| ACAAGAGTAATTACCTCAAC+CGG | 0.440109 | 6_4:+21769351 | None:intergenic |
| GGGTGGGAGTTTGCTTAGGA+AGG | 0.447670 | 6_4:-21771198 | Msa0982130:CDS |
| TTGAATACCTGATCAAATAA+GGG | 0.448968 | 6_4:+21768158 | None:intergenic |
| GGTTGGTTAAGGTTGATAAT+GGG | 0.450399 | 6_4:-21771136 | Msa0982130:CDS |
| TGAGATGGAGTGGAGGAGTG+TGG | 0.454775 | 6_4:+21771457 | None:intergenic |
| CGCTTAGGGCTTTGGATATG+GGG | 0.455785 | 6_4:-21771229 | Msa0982130:CDS |
| CTTTAGATCTTATCCGATCA+AGG | 0.458405 | 6_4:+21768219 | None:intergenic |
| CATAGTGCCACCACTTTGGC+GGG | 0.459007 | 6_4:+21766618 | None:intergenic |
| AATGTCGCCGGCGGCGGCGA+GGG | 0.462687 | 6_4:+21771400 | None:intergenic |
| TGATAACTGGAGAGCCAGCC+AGG | 0.466614 | 6_4:+21769460 | None:intergenic |
| ATGTCCTCCCTCGCCGCCGC+CGG | 0.467944 | 6_4:-21771407 | Msa0982130:CDS |
| GAATGTCGCCGGCGGCGGCG+AGG | 0.469365 | 6_4:+21771399 | None:intergenic |
| GCAAAGCATGATTTCTGAGT+AGG | 0.469422 | 6_4:+21767318 | None:intergenic |
| GTTTCCTAAGGTGCAAGACT+TGG | 0.471641 | 6_4:-21766684 | Msa0982130:CDS |
| CTTGATCGGATAAGATCTAA+AGG | 0.478631 | 6_4:-21768218 | Msa0982130:CDS |
| GTCGCCGGCGGCGGCGAGGG+AGG | 0.481353 | 6_4:+21771403 | None:intergenic |
| AGCTAAGATCTCTCAATGCT+TGG | 0.481715 | 6_4:-21767977 | Msa0982130:CDS |
| GAAGAGATCTGCCTTGTCAC+TGG | 0.484449 | 6_4:-21769505 | Msa0982130:CDS |
| TGACCGCACTGTTCCGGTTG+AGG | 0.485106 | 6_4:-21769364 | Msa0982130:intron |
| GCACTCCGGTCCTTGGCACT+CGG | 0.485361 | 6_4:-21771336 | Msa0982130:CDS |
| CAAAGCATGATTTCTGAGTA+GGG | 0.486239 | 6_4:+21767319 | None:intergenic |
| TTATGGGTGGGAGTTTGCTT+AGG | 0.488417 | 6_4:-21771202 | Msa0982130:CDS |
| GGTTTCGGAGAAAGCGAGGT+TGG | 0.493924 | 6_4:-21771153 | Msa0982130:CDS |
| CGGCGGCGAGGGAGGACATA+CGG | 0.496322 | 6_4:+21771411 | None:intergenic |
| AATGGCAGATAAATGAGCTT+CGG | 0.499618 | 6_4:-21768043 | Msa0982130:intron |
| GGGACTTAACAGGCAAAAGT+TGG | 0.501194 | 6_4:+21769547 | None:intergenic |
| CACTACAAGCTTTGAAGCAA+GGG | 0.503171 | 6_4:+21769527 | None:intergenic |
| CTGAAAGATCATTACCTGGC+TGG | 0.509814 | 6_4:-21769474 | Msa0982130:CDS |
| CGCAGAAGCAGTTCGTGAGA+TGG | 0.510927 | 6_4:-21771372 | Msa0982130:CDS |
| CGCACATAGTGCCACCACTT+TGG | 0.511097 | 6_4:+21766614 | None:intergenic |
| CCACCAGTAAAACAATAGTC+AGG | 0.511588 | 6_4:+21768005 | None:intergenic |
| GAGATGGAGTGGAGGAGTGT+GGG | 0.514149 | 6_4:+21771458 | None:intergenic |
| AGTTCCTCAGACAAAGATGC+TGG | 0.515281 | 6_4:+21767346 | None:intergenic |
| AAGCAGTTCGTGAGATGGCG+TGG | 0.524892 | 6_4:-21771367 | Msa0982130:CDS |
| CATGCTTTGCAATTCCAGCC+AGG | 0.532765 | 6_4:-21767305 | Msa0982130:intron |
| GAGAGAGTCGCTGATGGATG+AGG | 0.536053 | 6_4:+21771508 | None:intergenic |
| TCAGTGACTGCATGGCGCAC+TGG | 0.537211 | 6_4:-21769437 | Msa0982130:CDS |
| CAACACCGAGTGCCAAGGAC+CGG | 0.542861 | 6_4:+21771331 | None:intergenic |
| TTTGGATTCTGCTGTTGCGA+AGG | 0.543126 | 6_4:-21771174 | Msa0982130:CDS |
| GTATGTTATGATGTGGATCA+TGG | 0.546162 | 6_4:+21767922 | None:intergenic |
| GGATGCTGAGCAAGATATGT+AGG | 0.548812 | 6_4:+21768179 | None:intergenic |
| ACATAGTGCCACCACTTTGG+CGG | 0.549361 | 6_4:+21766617 | None:intergenic |
| GGAGATTCTGCGTCGAGCGT+TGG | 0.551554 | 6_4:+21771479 | None:intergenic |
| AGATGAATTGAAGTTTCCTA+AGG | 0.560556 | 6_4:-21766696 | Msa0982130:CDS |
| TGCGGCGCGAATGTCGCCGG+CGG | 0.563097 | 6_4:+21771391 | None:intergenic |
| TTATCCAGCATCTTTGTCTG+AGG | 0.563839 | 6_4:-21767350 | Msa0982130:CDS |
| TGATGTGGATCATGGTGTAA+TGG | 0.564342 | 6_4:+21767930 | None:intergenic |
| GTGGCGTGACGCGTACTCGA+TGG | 0.564597 | 6_4:-21771303 | Msa0982130:CDS |
| ATATGGGGATTATTATGGGT+GGG | 0.564715 | 6_4:-21771214 | Msa0982130:CDS |
| CAGAAAACTAAATACCTGGC+TGG | 0.564939 | 6_4:+21767291 | None:intergenic |
| CGAAGGTTTCGGAGAAAGCG+AGG | 0.569231 | 6_4:-21771157 | Msa0982130:CDS |
| CATCTCACGAACTGCTTCTG+CGG | 0.572178 | 6_4:+21771373 | None:intergenic |
| AGAGTTTAAAGAGGCGCTTA+GGG | 0.572608 | 6_4:-21771243 | Msa0982130:CDS |
| CTTCCTGAAAGATCATTACC+TGG | 0.575421 | 6_4:-21769478 | Msa0982130:CDS |
| GCAAGATATGTAGGACCACC+AGG | 0.576296 | 6_4:+21768188 | None:intergenic |
| CTCCACTCCATCTCATCCCA+CGG | 0.580867 | 6_4:-21771449 | Msa0982130:CDS |
| ACCGGCAACACCGAGTGCCA+AGG | 0.583074 | 6_4:+21771326 | None:intergenic |
| GTAGCCTCCGTGGGATGAGA+TGG | 0.584469 | 6_4:+21771442 | None:intergenic |
| TCACTACAAGCTTTGAAGCA+AGG | 0.585461 | 6_4:+21769526 | None:intergenic |
| CAGGAAGTTCTCCAGTGACA+AGG | 0.586848 | 6_4:+21769494 | None:intergenic |
| GATATGGGGATTATTATGGG+TGG | 0.587263 | 6_4:-21771215 | Msa0982130:CDS |
| ACATCATAACATACTAGCAC+AGG | 0.592715 | 6_4:-21767913 | Msa0982130:intron |
| AGTTATCATCAGTGACTGCA+TGG | 0.593726 | 6_4:-21769445 | Msa0982130:CDS |
| GGCACTCGGTGTTGCCGGTG+TGG | 0.599102 | 6_4:-21771322 | Msa0982130:CDS |
| AATGGCGTTACAGTTCCAGC+TGG | 0.601305 | 6_4:+21767948 | None:intergenic |
| TGTTTCGAGAGAGTCGCTGA+TGG | 0.607399 | 6_4:+21771502 | None:intergenic |
| GACGTAGGCGTAGCCTCCGT+GGG | 0.608040 | 6_4:+21771433 | None:intergenic |
| TGAAAATGGAGAGTTTAAAG+AGG | 0.609357 | 6_4:-21771252 | Msa0982130:CDS |
| TGGTTAAGGTTGATAATGGG+AGG | 0.611770 | 6_4:-21771133 | Msa0982130:CDS |
| GCGTGGGAGCAGCTGCACTC+CGG | 0.612868 | 6_4:-21771350 | Msa0982130:CDS |
| TATATATCCCGCCAAAGTGG+TGG | 0.622734 | 6_4:-21766625 | Msa0982130:CDS |
| AGAGTCGCTGATGGATGAGG+TGG | 0.626527 | 6_4:+21771511 | None:intergenic |
| TCTTGAATTTGATGTGTCGA+AGG | 0.626535 | 6_4:-21771072 | Msa0982130:intron |
| AGCAGTTCGTGAGATGGCGT+GGG | 0.629178 | 6_4:-21771366 | Msa0982130:CDS |
| GGACGTAGGCGTAGCCTCCG+TGG | 0.630457 | 6_4:+21771432 | None:intergenic |
| CGTGGGATGAGATGGAGTGG+AGG | 0.638713 | 6_4:+21771450 | None:intergenic |
| CTCCGTGGGATGAGATGGAG+TGG | 0.638980 | 6_4:+21771447 | None:intergenic |
| AAAGCATGATTTCTGAGTAG+GGG | 0.643449 | 6_4:+21767320 | None:intergenic |
| AAAGTAATACGACATTAAGA+CGG | 0.647553 | 6_4:+21766533 | None:intergenic |
| TGTTATATATCCCGCCAAAG+TGG | 0.659158 | 6_4:-21766628 | Msa0982130:CDS |
| TGTGCTAGTATGTTATGATG+TGG | 0.675622 | 6_4:+21767915 | None:intergenic |
| CACTCCATCTCATCCCACGG+AGG | 0.717936 | 6_4:-21771446 | Msa0982130:CDS |
| GAGTACGCGTCACGCCACAC+CGG | 0.723133 | 6_4:+21771308 | None:intergenic |
| GAGGGAGGACATACGGACGT+AGG | 0.726924 | 6_4:+21771418 | None:intergenic |
| TTACCTCAACCGGAACAGTG+CGG | 0.784273 | 6_4:+21769361 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTACTTATATTAATACA+TGG | - | chr6_4:21767144-21767163 | Msa0982130:intron | 15.0% |
| !! | GTATATTAATTGAAAAAAAG+AGG | + | chr6_4:21767348-21767367 | None:intergenic | 15.0% |
| !!! | GAATACCTTTTTTTTTTTTT+TGG | - | chr6_4:21767405-21767424 | Msa0982130:intron | 15.0% |
| !! | TTCTACCAAAAAAAAAAAAA+AGG | + | chr6_4:21767413-21767432 | None:intergenic | 15.0% |
| !! | TCATTATAACATTTAAACAA+TGG | - | chr6_4:21768241-21768260 | Msa0982130:CDS | 15.0% |
| !!! | GAAATTTAAGTTCTTTTTTT+TGG | - | chr6_4:21768952-21768971 | Msa0982130:intron | 15.0% |
| !! | AATTTAGCTATTTAAAAAGA+GGG | + | chr6_4:21769206-21769225 | None:intergenic | 15.0% |
| !! | AAATTTAGCTATTTAAAAAG+AGG | + | chr6_4:21769207-21769226 | None:intergenic | 15.0% |
| !!! | AATAGCTAAATTTATTTCTA+CGG | - | chr6_4:21769214-21769233 | Msa0982130:intron | 15.0% |
| !!! | AGTGAATAAATAAATTTGTT+TGG | - | chr6_4:21769408-21769427 | Msa0982130:CDS | 15.0% |
| !! | TATAACACAATTGTAATATA+GGG | + | chr6_4:21770390-21770409 | None:intergenic | 15.0% |
| !!! | TCATTTTATTGCTTTTAATT+AGG | - | chr6_4:21771197-21771216 | Msa0982130:CDS | 15.0% |
| !!! | AAGAAATACTCTATTTCTAT+TGG | + | chr6_4:21767129-21767148 | None:intergenic | 20.0% |
| !!! | TGTATAATATTTTTACAGCT+CGG | + | chr6_4:21767193-21767212 | None:intergenic | 20.0% |
| !! | TATATAATTCAAGCTATGAA+TGG | + | chr6_4:21767381-21767400 | None:intergenic | 20.0% |
| !! | TTATTAGATGAAATCTATGT+GGG | + | chr6_4:21767538-21767557 | None:intergenic | 20.0% |
| !! | TTTATTAGATGAAATCTATG+TGG | + | chr6_4:21767539-21767558 | None:intergenic | 20.0% |
| !! | AAGTTAATACTAATCACTAA+TGG | - | chr6_4:21767574-21767593 | Msa0982130:intron | 20.0% |
| !!! | TTCAAAATACATTTTTGCTA+TGG | + | chr6_4:21767666-21767685 | None:intergenic | 20.0% |
| !!! | TATTTTGAACGAATTGATTT+AGG | - | chr6_4:21767677-21767696 | Msa0982130:intron | 20.0% |
| !!! | GTTTTTTAATAGAAATGTCA+AGG | - | chr6_4:21767990-21768009 | Msa0982130:CDS | 20.0% |
| !! | ATAACATTTAAACAATGGAA+TGG | - | chr6_4:21768246-21768265 | Msa0982130:CDS | 20.0% |
| !!! | TATATTATTCCAGTTTTTCT+TGG | + | chr6_4:21768612-21768631 | None:intergenic | 20.0% |
| !!! | AGAGATAAAGTTTTCAAAAT+CGG | - | chr6_4:21768748-21768767 | Msa0982130:intron | 20.0% |
| !!! | AGTTTTGTAATTGTTAGTTA+AGG | + | chr6_4:21768870-21768889 | None:intergenic | 20.0% |
| !! | ATTTAGCTATTTAAAAAGAG+GGG | + | chr6_4:21769205-21769224 | None:intergenic | 20.0% |
| !!! | ATAGCTAAATTTATTTCTAC+GGG | - | chr6_4:21769215-21769234 | Msa0982130:intron | 20.0% |
| !! | GATGAATTTATGATTAATTC+TGG | + | chr6_4:21769244-21769263 | None:intergenic | 20.0% |
| !!! | GTAATTTTTTTTTTCTGTGA+TGG | - | chr6_4:21769652-21769671 | Msa0982130:intron | 20.0% |
| !! | TAATAGTATACTAGAAGAAA+AGG | - | chr6_4:21769694-21769713 | Msa0982130:intron | 20.0% |
| !! | AATAGTATACTAGAAGAAAA+GGG | - | chr6_4:21769695-21769714 | Msa0982130:intron | 20.0% |
| !! | ATATAACATGATTTAACTCT+GGG | + | chr6_4:21770240-21770259 | None:intergenic | 20.0% |
| !! | TATATAACATGATTTAACTC+TGG | + | chr6_4:21770241-21770260 | None:intergenic | 20.0% |
| !! | AGTAGTTATTAGTGAAATAA+AGG | - | chr6_4:21770302-21770321 | Msa0982130:intron | 20.0% |
| !! | CTATAACACAATTGTAATAT+AGG | + | chr6_4:21770391-21770410 | None:intergenic | 20.0% |
| !! | AATTAAGGAAATACTTCTAT+AGG | + | chr6_4:21770910-21770929 | None:intergenic | 20.0% |
| !! | GATATAAGATAGAAATGTTT+AGG | + | chr6_4:21771035-21771054 | None:intergenic | 20.0% |
| !! | AGTTTACCTATACAATATAT+GGG | - | chr6_4:21771080-21771099 | Msa0982130:CDS | 20.0% |
| !!! | TTATTGCTTTTTGATATTTC+TGG | - | chr6_4:21771240-21771259 | Msa0982130:CDS | 20.0% |
| !! | CTACATTTCATTATTGATAA+TGG | - | chr6_4:21771514-21771533 | Msa0982130:CDS | 20.0% |
| ! | TAAGAGACTTTATGGTTTAA+GGG | - | chr6_4:21767275-21767294 | Msa0982130:intron | 25.0% |
| ! | CATAAAATTCAAGCTATGAA+TGG | + | chr6_4:21767460-21767479 | None:intergenic | 25.0% |
| !! | GTTGAGGTAAATGTTTATTT+TGG | - | chr6_4:21767635-21767654 | Msa0982130:intron | 25.0% |
| !! | AAATCAATTTTGTGCATGTA+TGG | - | chr6_4:21767877-21767896 | Msa0982130:intron | 25.0% |
| !! | CTACATTTTCAACAAAATCA+AGG | + | chr6_4:21767916-21767935 | None:intergenic | 25.0% |
| ! | CATAATAAAACTCCATTGTT+TGG | - | chr6_4:21768090-21768109 | Msa0982130:intron | 25.0% |
| ! | AAAAAACATTTCTCCGTTAA+TGG | + | chr6_4:21768205-21768224 | None:intergenic | 25.0% |
| ! | TTAAACAATGGAATGGTAAT+TGG | - | chr6_4:21768253-21768272 | Msa0982130:CDS | 25.0% |
| ! | AGACATGAGTAAAATGATTA+TGG | - | chr6_4:21768385-21768404 | Msa0982130:intron | 25.0% |
| ! | GACATGAGTAAAATGATTAT+GGG | - | chr6_4:21768386-21768405 | Msa0982130:intron | 25.0% |
| ! | ACATGAGTAAAATGATTATG+GGG | - | chr6_4:21768387-21768406 | Msa0982130:intron | 25.0% |
| ! | CTATAAAGTAAACGTTAGAA+GGG | + | chr6_4:21768433-21768452 | None:intergenic | 25.0% |
| !! | TGATTTGTAACTAAAATGCA+TGG | - | chr6_4:21768691-21768710 | Msa0982130:intron | 25.0% |
| !! | GAGATAAAGTTTTCAAAATC+GGG | - | chr6_4:21768749-21768768 | Msa0982130:intron | 25.0% |
| !! | TTTAGTTTCTTGATTTCACA+GGG | - | chr6_4:21768780-21768799 | Msa0982130:intron | 25.0% |
| ! | TAACAGCTAATGAACATTTA+CGG | + | chr6_4:21768914-21768933 | None:intergenic | 25.0% |
| ! | ACAACTTTGTTACTAGTATT+TGG | - | chr6_4:21768988-21769007 | Msa0982130:intron | 25.0% |
| ! | CAACTTTGTTACTAGTATTT+GGG | - | chr6_4:21768989-21769008 | Msa0982130:intron | 25.0% |
| ! | TTAATACACTCTGATTACAT+TGG | - | chr6_4:21769135-21769154 | Msa0982130:intron | 25.0% |
| ! | TAATCATAAATTCATCCACT+AGG | - | chr6_4:21769248-21769267 | Msa0982130:intron | 25.0% |
| ! | CCAATTAAATAATTTCCTAG+TGG | + | chr6_4:21769266-21769285 | None:intergenic | 25.0% |
| ! | CCACTAGGAAATTATTTAAT+TGG | - | chr6_4:21769263-21769282 | Msa0982130:intron | 25.0% |
| ! | CAATCAGAGAGATATTTAAA+GGG | + | chr6_4:21769326-21769345 | None:intergenic | 25.0% |
| !!! | TTTCTACATAGAGCATTTTT+AGG | + | chr6_4:21769355-21769374 | None:intergenic | 25.0% |
| ! | ATAAATACAAACAACACTTG+AGG | + | chr6_4:21769617-21769636 | None:intergenic | 25.0% |
| ! | CAGAAAAAAAAAATTACACG+AGG | + | chr6_4:21769649-21769668 | None:intergenic | 25.0% |
| ! | AAAACTATTTATGTGCAGAT+TGG | - | chr6_4:21769748-21769767 | Msa0982130:intron | 25.0% |
| ! | TTGAATACCTGATCAAATAA+GGG | + | chr6_4:21769864-21769883 | None:intergenic | 25.0% |
| ! | TTTGAATACCTGATCAAATA+AGG | + | chr6_4:21769865-21769884 | None:intergenic | 25.0% |
| ! | AATAAGAACCATAATAGCAA+GGG | + | chr6_4:21770265-21770284 | None:intergenic | 25.0% |
| ! | AAATAAGAACCATAATAGCA+AGG | + | chr6_4:21770266-21770285 | None:intergenic | 25.0% |
| ! | ACAGATTTCTCTTAAGATAA+GGG | + | chr6_4:21770497-21770516 | None:intergenic | 25.0% |
| !! | AAATCTGTGATACAACATTT+TGG | - | chr6_4:21770509-21770528 | Msa0982130:intron | 25.0% |
| ! | CCATAGAATGATATATTTGA+CGG | - | chr6_4:21770592-21770611 | Msa0982130:intron | 25.0% |
| ! | CATATATTGTATAGGTAAAC+TGG | + | chr6_4:21771081-21771100 | None:intergenic | 25.0% |
| ! | CAGTTTACCTATACAATATA+TGG | - | chr6_4:21771079-21771098 | Msa0982130:CDS | 25.0% |
| ! | GTTTACCTATACAATATATG+GGG | - | chr6_4:21771081-21771100 | Msa0982130:CDS | 25.0% |
| !! | TTTTACCATTTTACAACAGA+CGG | + | chr6_4:21771133-21771152 | None:intergenic | 25.0% |
| ! | AAAGTAATACGACATTAAGA+CGG | + | chr6_4:21771489-21771508 | None:intergenic | 25.0% |
| TGAAAATGGAGAGTTTAAAG+AGG | - | chr6_4:21766767-21766786 | Msa0982130:intron | 30.0% | |
| TTTGGATATGGGGATTATTA+TGG | - | chr6_4:21766800-21766819 | Msa0982130:intron | 30.0% | |
| TTGGATATGGGGATTATTAT+GGG | - | chr6_4:21766801-21766820 | Msa0982130:intron | 30.0% | |
| !! | ACTCTATTTCTATTGGACAT+CGG | + | chr6_4:21767122-21767141 | None:intergenic | 30.0% |
| TTAATACATGGCAAGATGAT+TGG | - | chr6_4:21767156-21767175 | Msa0982130:intron | 30.0% | |
| TAGTAGAGTAAGAGACTTTA+TGG | - | chr6_4:21767267-21767286 | Msa0982130:intron | 30.0% | |
| GTAAGAGACTTTATGGTTTA+AGG | - | chr6_4:21767274-21767293 | Msa0982130:intron | 30.0% | |
| AATTAATCCACGACTTTGTA+GGG | + | chr6_4:21767316-21767335 | None:intergenic | 30.0% | |
| AAATTAATCCACGACTTTGT+AGG | + | chr6_4:21767317-21767336 | None:intergenic | 30.0% | |
| ! | TACAAAGTCGTGGATTAATT+TGG | - | chr6_4:21767316-21767335 | Msa0982130:CDS | 30.0% |
| AGACTAAACAACATCTATAG+AGG | - | chr6_4:21767772-21767791 | Msa0982130:intron | 30.0% | |
| TCAATCCTGTATCATATTTG+AGG | + | chr6_4:21768054-21768073 | None:intergenic | 30.0% | |
| CAAATATGATACAGGATTGA+TGG | - | chr6_4:21768054-21768073 | Msa0982130:intron | 30.0% | |
| ATAAAACTCCATTGTTTGGA+AGG | - | chr6_4:21768094-21768113 | Msa0982130:intron | 30.0% | |
| AAGGATTGATTGAAATACGA+GGG | - | chr6_4:21768113-21768132 | Msa0982130:intron | 30.0% | |
| ! | CTTTTCTTCTCTTCCATTAA+CGG | - | chr6_4:21768189-21768208 | Msa0982130:CDS | 30.0% |
| !!! | GGCTGTTTTTGGATATATAA+CGG | + | chr6_4:21768325-21768344 | None:intergenic | 30.0% |
| ATATATCCAAAAACAGCCTT+AGG | - | chr6_4:21768327-21768346 | Msa0982130:intron | 30.0% | |
| TATATCCAAAAACAGCCTTA+GGG | - | chr6_4:21768328-21768347 | Msa0982130:intron | 30.0% | |
| GCTATAAAGTAAACGTTAGA+AGG | + | chr6_4:21768434-21768453 | None:intergenic | 30.0% | |
| ! | CTTTATAGCTTTTACACTGT+AGG | - | chr6_4:21768445-21768464 | Msa0982130:intron | 30.0% |
| TTGTTCTTCAAAGTTCAAAG+AGG | + | chr6_4:21768722-21768741 | None:intergenic | 30.0% | |
| ! | GTTTAGTTTCTTGATTTCAC+AGG | - | chr6_4:21768779-21768798 | Msa0982130:intron | 30.0% |
| TTAGTTTCTTGATTTCACAG+GGG | - | chr6_4:21768781-21768800 | Msa0982130:intron | 30.0% | |
| CTGTAACTTAACTCAATTGT+AGG | - | chr6_4:21768888-21768907 | Msa0982130:intron | 30.0% | |
| TAGTATTTGGGAAAATTCAC+CGG | - | chr6_4:21769001-21769020 | Msa0982130:intron | 30.0% | |
| TATGCCTGTAAAGAAAAGTA+GGG | - | chr6_4:21769049-21769068 | Msa0982130:intron | 30.0% | |
| GCAATCAGAGAGATATTTAA+AGG | + | chr6_4:21769327-21769346 | None:intergenic | 30.0% | |
| AAATATCTCTCTGATTGCAT+AGG | - | chr6_4:21769329-21769348 | Msa0982130:intron | 30.0% | |
| CATGTCATAATTACAACAGT+TGG | + | chr6_4:21769912-21769931 | None:intergenic | 30.0% | |
| TAATTATGACATGCAAGTTC+AGG | - | chr6_4:21769919-21769938 | Msa0982130:intron | 30.0% | |
| !! | ATTCCTGACTATTGTTTTAC+TGG | - | chr6_4:21770011-21770030 | Msa0982130:intron | 30.0% |
| !! | TTATATACCCCTTGCTATTA+TGG | - | chr6_4:21770254-21770273 | Msa0982130:intron | 30.0% |
| ATAAGAACCATAATAGCAAG+GGG | + | chr6_4:21770264-21770283 | None:intergenic | 30.0% | |
| CTAAATGTACACTTTATAGC+TGG | - | chr6_4:21770413-21770432 | Msa0982130:intron | 30.0% | |
| AAATCTGAACTTTGTATTGC+TGG | + | chr6_4:21770468-21770487 | None:intergenic | 30.0% | |
| CACAGATTTCTCTTAAGATA+AGG | + | chr6_4:21770498-21770517 | None:intergenic | 30.0% | |
| CCGTCAAATATATCATTCTA+TGG | + | chr6_4:21770595-21770614 | None:intergenic | 30.0% | |
| AGTTCAGAAAACTAAATACC+TGG | + | chr6_4:21770735-21770754 | None:intergenic | 30.0% | |
| TTCTATAGGCTATAGTTCTT+CGG | + | chr6_4:21770896-21770915 | None:intergenic | 30.0% | |
| AGAGAAGATACGTTGAATTA+AGG | + | chr6_4:21770925-21770944 | None:intergenic | 30.0% | |
| ! | ATGGTAAAATTTTATGCGCA+CGG | - | chr6_4:21771144-21771163 | Msa0982130:CDS | 30.0% |
| ATGAACGCATATGAAATGAA+TGG | + | chr6_4:21771181-21771200 | None:intergenic | 30.0% | |
| AGATGAATTGAAGTTTCCTA+AGG | - | chr6_4:21771323-21771342 | Msa0982130:CDS | 30.0% | |
| ! | ATTTGTAGACTGCATTTTAG+AGG | - | chr6_4:21771359-21771378 | Msa0982130:CDS | 30.0% |
| GCGAAATGTTGCTATGAAAA+TGG | - | chr6_4:21766753-21766772 | Msa0982130:intron | 35.0% | |
| ATATGGGGATTATTATGGGT+GGG | - | chr6_4:21766805-21766824 | Msa0982130:intron | 35.0% | |
| !! | AGGTTGGTTAAGGTTGATAA+TGG | - | chr6_4:21766882-21766901 | Msa0982130:intron | 35.0% |
| !! | GGTTGGTTAAGGTTGATAAT+GGG | - | chr6_4:21766883-21766902 | Msa0982130:intron | 35.0% |
| !! | AATGGGAGGTGTAAAGATTT+TGG | - | chr6_4:21766900-21766919 | Msa0982130:intron | 35.0% |
| TCTTGAATTTGATGTGTCGA+AGG | - | chr6_4:21766947-21766966 | Msa0982130:intron | 35.0% | |
| !! | TGTGTAAAGTGCTGTGAAAT+AGG | - | chr6_4:21767000-21767019 | Msa0982130:intron | 35.0% |
| ! | TTTCTTTCTCTACTCTGAGA+TGG | + | chr6_4:21767067-21767086 | None:intergenic | 35.0% |
| ! | GTAAAACTAGTTTACACCCA+CGG | + | chr6_4:21767098-21767117 | None:intergenic | 35.0% |
| ! | ATTTTTACAGCTCGGACTAA+TGG | + | chr6_4:21767185-21767204 | None:intergenic | 35.0% |
| ACACTGTCAATGCATAGTTA+TGG | - | chr6_4:21767210-21767229 | Msa0982130:intron | 35.0% | |
| CAATGCATAGTTATGGTAAG+TGG | - | chr6_4:21767217-21767236 | Msa0982130:intron | 35.0% | |
| ACTCTACTAAACTGTCAAGT+TGG | + | chr6_4:21767256-21767275 | None:intergenic | 35.0% | |
| TGCATCTCACAACTTTATGT+GGG | - | chr6_4:21767511-21767530 | Msa0982130:intron | 35.0% | |
| TTTGTGCATGTATGGAATCA+CGG | - | chr6_4:21767885-21767904 | Msa0982130:intron | 35.0% | |
| AAAACAATTACGCGCATGTT+TGG | + | chr6_4:21767975-21767994 | None:intergenic | 35.0% | |
| !!! | ATGTTTTGACCACAGAGTTT+GGG | + | chr6_4:21768016-21768035 | None:intergenic | 35.0% |
| !!! | TATGTTTTGACCACAGAGTT+TGG | + | chr6_4:21768017-21768036 | None:intergenic | 35.0% |
| GTCATCCTCAAATATGATAC+AGG | - | chr6_4:21768046-21768065 | Msa0982130:intron | 35.0% | |
| ACAGGATTGATGGAATGAAA+TGG | - | chr6_4:21768064-21768083 | Msa0982130:intron | 35.0% | |
| CAATCAATCCTTCCAAACAA+TGG | + | chr6_4:21768105-21768124 | None:intergenic | 35.0% | |
| GAAGGATTGATTGAAATACG+AGG | - | chr6_4:21768112-21768131 | Msa0982130:intron | 35.0% | |
| TTGATTGAAATACGAGGGAA+AGG | - | chr6_4:21768118-21768137 | Msa0982130:intron | 35.0% | |
| AATGGAAGAGAAGAAAAGCA+AGG | + | chr6_4:21768187-21768206 | None:intergenic | 35.0% | |
| TGAGTAAAATGATTATGGGG+TGG | - | chr6_4:21768390-21768409 | Msa0982130:intron | 35.0% | |
| ! | TTATTCCAGTTTTTCTTGGC+TGG | + | chr6_4:21768608-21768627 | None:intergenic | 35.0% |
| ACAAGAGTAATTACCTCAAC+CGG | + | chr6_4:21768671-21768690 | None:intergenic | 35.0% | |
| TTCTTCAAAGTTCAAAGAGG+AGG | + | chr6_4:21768719-21768738 | None:intergenic | 35.0% | |
| AAAGGATCTGAGTATCAATG+GGG | + | chr6_4:21768833-21768852 | None:intergenic | 35.0% | |
| CAAAGGATCTGAGTATCAAT+GGG | + | chr6_4:21768834-21768853 | None:intergenic | 35.0% | |
| AAGGTGAGAGTTTAATCCAA+AGG | + | chr6_4:21768851-21768870 | None:intergenic | 35.0% | |
| AGTATTTGGGAAAATTCACC+GGG | - | chr6_4:21769002-21769021 | Msa0982130:intron | 35.0% | |
| GCAGTTTGAGCAAAAAGTAA+CGG | - | chr6_4:21769024-21769043 | Msa0982130:intron | 35.0% | |
| GTATGCCTGTAAAGAAAAGT+AGG | - | chr6_4:21769048-21769067 | Msa0982130:intron | 35.0% | |
| TGTAAAGAAAAGTAGGGTGA+GGG | - | chr6_4:21769055-21769074 | Msa0982130:intron | 35.0% | |
| AATGACAGGGTAAAAGTTCT+AGG | + | chr6_4:21769379-21769398 | None:intergenic | 35.0% | |
| ATTTGTTTGGTTGCAACAGT+TGG | - | chr6_4:21769421-21769440 | Msa0982130:CDS | 35.0% | |
| TCAGGATTTGTCACAGAATA+GGG | + | chr6_4:21769468-21769487 | None:intergenic | 35.0% | |
| TGTTGAACTGAAACTGGAAA+TGG | - | chr6_4:21769512-21769531 | Msa0982130:CDS | 35.0% | |
| CTTTAGATCTTATCCGATCA+AGG | + | chr6_4:21769803-21769822 | None:intergenic | 35.0% | |
| CTTGATCGGATAAGATCTAA+AGG | - | chr6_4:21769801-21769820 | Msa0982130:intron | 35.0% | |
| ! | CGGTTTCTGACATTTTTGAA+TGG | - | chr6_4:21769958-21769977 | Msa0982130:intron | 35.0% |
| AATGGCAGATAAATGAGCTT+CGG | - | chr6_4:21769976-21769995 | Msa0982130:intron | 35.0% | |
| !! | ACTATTGTTTTACTGGTGGA+GGG | - | chr6_4:21770018-21770037 | Msa0982130:intron | 35.0% |
| GTATGTTATGATGTGGATCA+TGG | + | chr6_4:21770100-21770119 | None:intergenic | 35.0% | |
| TGTGCTAGTATGTTATGATG+TGG | + | chr6_4:21770107-21770126 | None:intergenic | 35.0% | |
| ACATCATAACATACTAGCAC+AGG | - | chr6_4:21770106-21770125 | Msa0982130:intron | 35.0% | |
| AAAAATGCTGCGTACATTAC+CGG | - | chr6_4:21770565-21770584 | Msa0982130:intron | 35.0% | |
| TATATCATTCTATGGTGCAC+CGG | + | chr6_4:21770587-21770606 | None:intergenic | 35.0% | |
| TTGTTGGGAAAAAATACGTC+AGG | - | chr6_4:21770644-21770663 | Msa0982130:intron | 35.0% | |
| AAAGCATGATTTCTGAGTAG+GGG | + | chr6_4:21770702-21770721 | None:intergenic | 35.0% | |
| CAAAGCATGATTTCTGAGTA+GGG | + | chr6_4:21770703-21770722 | None:intergenic | 35.0% | |
| GTTCTTCGGTCATTCAAAAT+AGG | + | chr6_4:21770825-21770844 | None:intergenic | 35.0% | |
| AGTGATATTCTTCCAAGCAA+AGG | + | chr6_4:21770851-21770870 | None:intergenic | 35.0% | |
| GTTCTTCGGTCATTCAAAAT+AGG | + | chr6_4:21770825-21770844 | None:intergenic | 35.0% | |
| CCATACCCCATATATTGTAT+AGG | + | chr6_4:21771089-21771108 | None:intergenic | 35.0% | |
| CCTATACAATATATGGGGTA+TGG | - | chr6_4:21771086-21771105 | Msa0982130:CDS | 35.0% | |
| !! | GGTCAGTTTCTTTTGTTTGA+AGG | - | chr6_4:21771284-21771303 | Msa0982130:CDS | 35.0% |
| CCAAAAGCTAACTGATAAAC+TGG | + | chr6_4:21771442-21771461 | None:intergenic | 35.0% | |
| !!! | CCAGTTTATCAGTTAGCTTT+TGG | - | chr6_4:21771439-21771458 | Msa0982130:CDS | 35.0% |
| !!! | GTTTATCAGTTAGCTTTTGG+TGG | - | chr6_4:21771442-21771461 | Msa0982130:CDS | 35.0% |
| !! | AGAGTTTAAAGAGGCGCTTA+GGG | - | chr6_4:21766776-21766795 | Msa0982130:intron | 40.0% |
| GATATGGGGATTATTATGGG+TGG | - | chr6_4:21766804-21766823 | Msa0982130:intron | 40.0% | |
| ! | GAGTTTGCTTAGGAAGGATT+TGG | - | chr6_4:21766827-21766846 | Msa0982130:intron | 40.0% |
| !! | TGGTTAAGGTTGATAATGGG+AGG | - | chr6_4:21766886-21766905 | Msa0982130:intron | 40.0% |
| AATTTGATGTGTCGAAGGTG+AGG | - | chr6_4:21766952-21766971 | Msa0982130:intron | 40.0% | |
| AGAAAGAAAGATGTACACCG+TGG | - | chr6_4:21767078-21767097 | Msa0982130:intron | 40.0% | |
| GAAAGAAAGATGTACACCGT+GGG | - | chr6_4:21767079-21767098 | Msa0982130:intron | 40.0% | |
| GTGCATCTCACAACTTTATG+TGG | - | chr6_4:21767510-21767529 | Msa0982130:intron | 40.0% | |
| ATGGCACTACAAGTCTACAA+CGG | - | chr6_4:21767593-21767612 | Msa0982130:intron | 40.0% | |
| CTGACATCTGAATGAAGTTG+AGG | - | chr6_4:21767619-21767638 | Msa0982130:intron | 40.0% | |
| CGGTGAGTTTCAGAAAATCA+CGG | + | chr6_4:21767947-21767966 | None:intergenic | 40.0% | |
| CTGAACGAAAGGGGATTTAT+TGG | + | chr6_4:21768293-21768312 | None:intergenic | 40.0% | |
| ! | TTTGAAGCAAGGGACTTAAC+AGG | + | chr6_4:21768485-21768504 | None:intergenic | 40.0% |
| !! | CACTACAAGCTTTGAAGCAA+GGG | + | chr6_4:21768495-21768514 | None:intergenic | 40.0% |
| !! | TCACTACAAGCTTTGAAGCA+AGG | + | chr6_4:21768496-21768515 | None:intergenic | 40.0% |
| CTTCCTGAAAGATCATTACC+TGG | - | chr6_4:21768541-21768560 | Msa0982130:intron | 40.0% | |
| ATGCAGTCACTGATGATAAC+TGG | + | chr6_4:21768575-21768594 | None:intergenic | 40.0% | |
| AGTTATCATCAGTGACTGCA+TGG | - | chr6_4:21768574-21768593 | Msa0982130:intron | 40.0% | |
| GATTACTTGCAAAGAGTTGC+TGG | - | chr6_4:21768632-21768651 | Msa0982130:intron | 40.0% | |
| CCAAAGGATCTGAGTATCAA+TGG | + | chr6_4:21768835-21768854 | None:intergenic | 40.0% | |
| CCATTGATACTCAGATCCTT+TGG | - | chr6_4:21768832-21768851 | Msa0982130:intron | 40.0% | |
| !! | TACTTTTTGCTCAAACTGCC+CGG | + | chr6_4:21769023-21769042 | None:intergenic | 40.0% |
| !! | CTCACCCTACTTTTCTTTAC+AGG | + | chr6_4:21769056-21769075 | None:intergenic | 40.0% |
| CTGTAAAGAAAAGTAGGGTG+AGG | - | chr6_4:21769054-21769073 | Msa0982130:intron | 40.0% | |
| CACTTGACAGATGAATGACA+GGG | + | chr6_4:21769392-21769411 | None:intergenic | 40.0% | |
| TCACTTGACAGATGAATGAC+AGG | + | chr6_4:21769393-21769412 | None:intergenic | 40.0% | |
| AGGATTTGTCACAGAATAGG+GGG | + | chr6_4:21769466-21769485 | None:intergenic | 40.0% | |
| CAGGATTTGTCACAGAATAG+GGG | + | chr6_4:21769467-21769486 | None:intergenic | 40.0% | |
| GTCAGGATTTGTCACAGAAT+AGG | + | chr6_4:21769469-21769488 | None:intergenic | 40.0% | |
| TGGCTAAAACAGAATCTGTC+AGG | + | chr6_4:21769486-21769505 | None:intergenic | 40.0% | |
| GTTTCAGTTCAACAACTTGG+TGG | + | chr6_4:21769506-21769525 | None:intergenic | 40.0% | |
| CCAGTTTCAGTTCAACAACT+TGG | + | chr6_4:21769509-21769528 | None:intergenic | 40.0% | |
| CCAAGTTGTTGAACTGAAAC+TGG | - | chr6_4:21769506-21769525 | Msa0982130:CDS | 40.0% | |
| AGAAGAAAAGGGTAAGTGTG+CGG | - | chr6_4:21769706-21769725 | Msa0982130:intron | 40.0% | |
| ! | CGTTTTCTGAGTTCCTTGAT+CGG | - | chr6_4:21769787-21769806 | Msa0982130:intron | 40.0% |
| ! | AGATCTAAAGGCTTTTCTCC+TGG | - | chr6_4:21769813-21769832 | Msa0982130:intron | 40.0% |
| ! | TCAGCATCCCTTATTTGATC+AGG | - | chr6_4:21769854-21769873 | Msa0982130:intron | 40.0% |
| ! | CAGGACTTTTACTGCTCTTT+CGG | - | chr6_4:21769938-21769957 | Msa0982130:intron | 40.0% |
| CCACCAGTAAAACAATAGTC+AGG | + | chr6_4:21770017-21770036 | None:intergenic | 40.0% | |
| !! | CCTGACTATTGTTTTACTGG+TGG | - | chr6_4:21770014-21770033 | Msa0982130:intron | 40.0% |
| !! | GACTATTGTTTTACTGGTGG+AGG | - | chr6_4:21770017-21770036 | Msa0982130:intron | 40.0% |
| !! | CTATTGTTTTACTGGTGGAG+GGG | - | chr6_4:21770019-21770038 | Msa0982130:intron | 40.0% |
| AGCTAAGATCTCTCAATGCT+TGG | - | chr6_4:21770042-21770061 | Msa0982130:intron | 40.0% | |
| AGATCTCTCAATGCTTGGTT+TGG | - | chr6_4:21770047-21770066 | Msa0982130:intron | 40.0% | |
| TGATGTGGATCATGGTGTAA+TGG | + | chr6_4:21770092-21770111 | None:intergenic | 40.0% | |
| ACATGATTTAACTCTGGGCA+GGG | + | chr6_4:21770235-21770254 | None:intergenic | 40.0% | |
| AACATGATTTAACTCTGGGC+AGG | + | chr6_4:21770236-21770255 | None:intergenic | 40.0% | |
| ! | ATAGGGAAGAAGCATGAATC+TGG | + | chr6_4:21770373-21770392 | None:intergenic | 40.0% |
| !! | ATGTCTTGTTTCACACTTCC+AGG | - | chr6_4:21770621-21770640 | Msa0982130:intron | 40.0% |
| TTTCACACTTCCAGGTTGTT+GGG | - | chr6_4:21770629-21770648 | Msa0982130:intron | 40.0% | |
| !!! | CGTATTTTTTCCCAACAACC+TGG | + | chr6_4:21770642-21770661 | None:intergenic | 40.0% |
| TTATCCAGCATCTTTGTCTG+AGG | - | chr6_4:21770669-21770688 | Msa0982130:intron | 40.0% | |
| GCAAAGCATGATTTCTGAGT+AGG | + | chr6_4:21770704-21770723 | None:intergenic | 40.0% | |
| CAGAAAACTAAATACCTGGC+TGG | + | chr6_4:21770731-21770750 | None:intergenic | 40.0% | |
| AGCGATATTCTTCCAAGCAA+AGG | + | chr6_4:21770794-21770813 | None:intergenic | 40.0% | |
| ! | AAATCTGTCTTCGTGTTGAC+TGG | - | chr6_4:21771263-21771282 | Msa0982130:CDS | 40.0% |
| AATTCCAAGTCTTGCACCTT+AGG | + | chr6_4:21771342-21771361 | None:intergenic | 40.0% | |
| !! | GTAGACTGCATTTTAGAGGA+AGG | - | chr6_4:21771363-21771382 | Msa0982130:CDS | 40.0% |
| TGTTATATATCCCGCCAAAG+TGG | - | chr6_4:21771391-21771410 | Msa0982130:CDS | 40.0% | |
| !! | GAGAGTTTAAAGAGGCGCTT+AGG | - | chr6_4:21766775-21766794 | Msa0982130:intron | 45.0% |
| ! | TTATGGGTGGGAGTTTGCTT+AGG | - | chr6_4:21766817-21766836 | Msa0982130:intron | 45.0% |
| TTTGGATTCTGCTGTTGCGA+AGG | - | chr6_4:21766845-21766864 | Msa0982130:intron | 45.0% | |
| TTCTGCTGTTGCGAAGGTTT+CGG | - | chr6_4:21766851-21766870 | Msa0982130:intron | 45.0% | |
| !! | GGGAGGTGTAAAGATTTTGG+TGG | - | chr6_4:21766903-21766922 | Msa0982130:intron | 45.0% |
| TACGCGCATGTTTGGATTTG+CGG | + | chr6_4:21767967-21767986 | None:intergenic | 45.0% | |
| TGAAATACGAGGGAAAGGAG+TGG | - | chr6_4:21768123-21768142 | Msa0982130:intron | 45.0% | |
| GAAATACGAGGGAAAGGAGT+GGG | - | chr6_4:21768124-21768143 | Msa0982130:intron | 45.0% | |
| AGAGTGAAGCTGAACGAAAG+GGG | + | chr6_4:21768302-21768321 | None:intergenic | 45.0% | |
| GAGAGTGAAGCTGAACGAAA+GGG | + | chr6_4:21768303-21768322 | None:intergenic | 45.0% | |
| GGGACTTAACAGGCAAAAGT+TGG | + | chr6_4:21768475-21768494 | None:intergenic | 45.0% | |
| CAGCCAGGTAATGATCTTTC+AGG | + | chr6_4:21768547-21768566 | None:intergenic | 45.0% | |
| CTGAAAGATCATTACCTGGC+TGG | - | chr6_4:21768545-21768564 | Msa0982130:intron | 45.0% | |
| ACAGGGGAAAACAGATAGCT+GGG | - | chr6_4:21768797-21768816 | Msa0982130:intron | 45.0% | |
| TTTGTCACAGAATAGGGGGA+GGG | + | chr6_4:21769462-21769481 | None:intergenic | 45.0% | |
| ATTTGTCACAGAATAGGGGG+AGG | + | chr6_4:21769463-21769482 | None:intergenic | 45.0% | |
| ! | TCTAAAGGCTTTTCTCCTGG+TGG | - | chr6_4:21769816-21769835 | Msa0982130:intron | 45.0% |
| GGATGCTGAGCAAGATATGT+AGG | + | chr6_4:21769843-21769862 | None:intergenic | 45.0% | |
| ! | AGTTGGACTCATGGGAGTAT+GGG | + | chr6_4:21770329-21770348 | None:intergenic | 45.0% |
| AAGTTGGACTCATGGGAGTA+TGG | + | chr6_4:21770330-21770349 | None:intergenic | 45.0% | |
| TACTCCCATGAGTCCAACTT+CGG | - | chr6_4:21770330-21770349 | Msa0982130:intron | 45.0% | |
| GTAACAGTACTTGCCGAAGT+TGG | + | chr6_4:21770346-21770365 | None:intergenic | 45.0% | |
| ! | GAAGAAGCATGAATCTGGCT+CGG | + | chr6_4:21770368-21770387 | None:intergenic | 45.0% |
| ACACTTTATAGCTGGCAACC+TGG | - | chr6_4:21770421-21770440 | Msa0982130:intron | 45.0% | |
| TACATCAACTATGCCATGCC+AGG | + | chr6_4:21770442-21770461 | None:intergenic | 45.0% | |
| GTTTCACACTTCCAGGTTGT+TGG | - | chr6_4:21770628-21770647 | Msa0982130:intron | 45.0% | |
| AGTTCCTCAGACAAAGATGC+TGG | + | chr6_4:21770676-21770695 | None:intergenic | 45.0% | |
| CAAGCAAAGGCTTAAGCAGA+CGG | + | chr6_4:21770781-21770800 | None:intergenic | 45.0% | |
| ! | CCAAGCAAAGGCTTGTTCTT+CGG | + | chr6_4:21770839-21770858 | None:intergenic | 45.0% |
| ! | TTTTACAACAGACGGAGTCG+TGG | + | chr6_4:21771125-21771144 | None:intergenic | 45.0% |
| CGACTCCGTCTGTTGTAAAA+TGG | - | chr6_4:21771125-21771144 | Msa0982130:CDS | 45.0% | |
| GTTTCCTAAGGTGCAAGACT+TGG | - | chr6_4:21771335-21771354 | Msa0982130:CDS | 45.0% | |
| TATATATCCCGCCAAAGTGG+TGG | - | chr6_4:21771394-21771413 | Msa0982130:CDS | 45.0% | |
| !!! | AGTTAGCTTTTGGTGGAGTG+AGG | - | chr6_4:21771449-21771468 | Msa0982130:CDS | 45.0% |
| !!! | GTTAGCTTTTGGTGGAGTGA+GGG | - | chr6_4:21771450-21771469 | Msa0982130:CDS | 45.0% |
| TGTTTCGAGAGAGTCGCTGA+TGG | + | chr6_4:21766520-21766539 | None:intergenic | 50.0% | |
| CATCTCACGAACTGCTTCTG+CGG | + | chr6_4:21766649-21766668 | None:intergenic | 50.0% | |
| !! | TAAAGAGGCGCTTAGGGCTT+TGG | - | chr6_4:21766782-21766801 | Msa0982130:intron | 50.0% |
| !! | GCGCTTAGGGCTTTGGATAT+GGG | - | chr6_4:21766789-21766808 | Msa0982130:intron | 50.0% |
| !! | CGCTTAGGGCTTTGGATATG+GGG | - | chr6_4:21766790-21766809 | Msa0982130:intron | 50.0% |
| ! | GGAGAAAGCGAGGTTGGTTA+AGG | - | chr6_4:21766872-21766891 | Msa0982130:intron | 50.0% |
| !! | GAGAGTACCCTACAAAGTCG+TGG | - | chr6_4:21767306-21767325 | Msa0982130:CDS | 50.0% |
| GTGCATGTATGGAATCACGG+TGG | - | chr6_4:21767888-21767907 | Msa0982130:intron | 50.0% | |
| ATGTCAAGGCCCAAACTCTG+TGG | - | chr6_4:21768004-21768023 | Msa0982130:CDS | 50.0% | |
| GGGAAAGGAGTGGGATATGA+TGG | - | chr6_4:21768133-21768152 | Msa0982130:intron | 50.0% | |
| GGAGAGTGAAGCTGAACGAA+AGG | + | chr6_4:21768304-21768323 | None:intergenic | 50.0% | |
| !! | GAGCACCCTAAGGCTGTTTT+TGG | + | chr6_4:21768336-21768355 | None:intergenic | 50.0% |
| !! | AAGCACAGAAGAGCACCCTA+AGG | + | chr6_4:21768346-21768365 | None:intergenic | 50.0% |
| GAAGAGATCTGCCTTGTCAC+TGG | - | chr6_4:21768514-21768533 | Msa0982130:intron | 50.0% | |
| CAGGAAGTTCTCCAGTGACA+AGG | + | chr6_4:21768528-21768547 | None:intergenic | 50.0% | |
| ACTGGCCAGCCAAGAAAAAC+TGG | - | chr6_4:21768600-21768619 | Msa0982130:intron | 50.0% | |
| TTACCTCAACCGGAACAGTG+CGG | + | chr6_4:21768661-21768680 | None:intergenic | 50.0% | |
| CACAGGGGAAAACAGATAGC+TGG | - | chr6_4:21768796-21768815 | Msa0982130:intron | 50.0% | |
| TTGTCACAGAATAGGGGGAG+GGG | + | chr6_4:21769461-21769480 | None:intergenic | 50.0% | |
| AAGTGTGCGGCATTCTTTGC+AGG | - | chr6_4:21769719-21769738 | Msa0982130:intron | 50.0% | |
| TGCGGCATTCTTTGCAGGTT+GGG | - | chr6_4:21769724-21769743 | Msa0982130:intron | 50.0% | |
| GCAAGATATGTAGGACCACC+AGG | + | chr6_4:21769834-21769853 | None:intergenic | 50.0% | |
| !! | AATGCTTGGTTTGGTCCAGC+TGG | - | chr6_4:21770056-21770075 | Msa0982130:intron | 50.0% |
| AATGGCGTTACAGTTCCAGC+TGG | + | chr6_4:21770074-21770093 | None:intergenic | 50.0% | |
| TTAAACACTCACCTCGCCCT+AGG | - | chr6_4:21770209-21770228 | Msa0982130:intron | 50.0% | |
| CTTGCCGAAGTTGGACTCAT+GGG | + | chr6_4:21770337-21770356 | None:intergenic | 50.0% | |
| ACTTGCCGAAGTTGGACTCA+TGG | + | chr6_4:21770338-21770357 | None:intergenic | 50.0% | |
| TTATAGCTGGCAACCTGGCA+TGG | - | chr6_4:21770426-21770445 | Msa0982130:intron | 50.0% | |
| CATGCTTTGCAATTCCAGCC+AGG | - | chr6_4:21770714-21770733 | Msa0982130:intron | 50.0% | |
| CGTCTGCTTAAGCCTTTGCT+TGG | - | chr6_4:21770779-21770798 | Msa0982130:intron | 50.0% | |
| CCGAAGAACAAGCCTTTGCT+TGG | - | chr6_4:21770836-21770855 | Msa0982130:intron | 50.0% | |
| ACATAGTGCCACCACTTTGG+CGG | + | chr6_4:21771405-21771424 | None:intergenic | 50.0% | |
| ! | AGAGTCGCTGATGGATGAGG+TGG | + | chr6_4:21766511-21766530 | None:intergenic | 55.0% |
| ! | GAGAGAGTCGCTGATGGATG+AGG | + | chr6_4:21766514-21766533 | None:intergenic | 55.0% |
| ! | GAGATGGAGTGGAGGAGTGT+GGG | + | chr6_4:21766564-21766583 | None:intergenic | 55.0% |
| TGAGATGGAGTGGAGGAGTG+TGG | + | chr6_4:21766565-21766584 | None:intergenic | 55.0% | |
| CTCCACTCCATCTCATCCCA+CGG | - | chr6_4:21766570-21766589 | Msa0982130:CDS | 55.0% | |
| CGCAGAAGCAGTTCGTGAGA+TGG | - | chr6_4:21766647-21766666 | Msa0982130:CDS | 55.0% | |
| AAGCAGTTCGTGAGATGGCG+TGG | - | chr6_4:21766652-21766671 | Msa0982130:CDS | 55.0% | |
| AGCAGTTCGTGAGATGGCGT+GGG | - | chr6_4:21766653-21766672 | Msa0982130:CDS | 55.0% | |
| !! | GGCGCTTAGGGCTTTGGATA+TGG | - | chr6_4:21766788-21766807 | Msa0982130:intron | 55.0% |
| ! | GGGTGGGAGTTTGCTTAGGA+AGG | - | chr6_4:21766821-21766840 | Msa0982130:intron | 55.0% |
| CGAAGGTTTCGGAGAAAGCG+AGG | - | chr6_4:21766862-21766881 | Msa0982130:intron | 55.0% | |
| GGTTTCGGAGAAAGCGAGGT+TGG | - | chr6_4:21766866-21766885 | Msa0982130:intron | 55.0% | |
| TGATAACTGGAGAGCCAGCC+AGG | + | chr6_4:21768562-21768581 | None:intergenic | 55.0% | |
| GTGCGGCATTCTTTGCAGGT+TGG | - | chr6_4:21769723-21769742 | Msa0982130:intron | 55.0% | |
| TTAACTCTGGGCAGGGCCTA+GGG | + | chr6_4:21770228-21770247 | None:intergenic | 55.0% | |
| TTTAACTCTGGGCAGGGCCT+AGG | + | chr6_4:21770229-21770248 | None:intergenic | 55.0% | |
| CATAGTGCCACCACTTTGGC+GGG | + | chr6_4:21771404-21771423 | None:intergenic | 55.0% | |
| CGCACATAGTGCCACCACTT+TGG | + | chr6_4:21771408-21771427 | None:intergenic | 55.0% | |
| GGAGATTCTGCGTCGAGCGT+TGG | + | chr6_4:21766543-21766562 | None:intergenic | 60.0% | |
| CGTGGGATGAGATGGAGTGG+AGG | + | chr6_4:21766572-21766591 | None:intergenic | 60.0% | |
| CTCCGTGGGATGAGATGGAG+TGG | + | chr6_4:21766575-21766594 | None:intergenic | 60.0% | |
| CACTCCATCTCATCCCACGG+AGG | - | chr6_4:21766573-21766592 | Msa0982130:CDS | 60.0% | |
| GTAGCCTCCGTGGGATGAGA+TGG | + | chr6_4:21766580-21766599 | None:intergenic | 60.0% | |
| GAGGGAGGACATACGGACGT+AGG | + | chr6_4:21766604-21766623 | None:intergenic | 60.0% | |
| CAACACCGAGTGCCAAGGAC+CGG | + | chr6_4:21766691-21766710 | None:intergenic | 60.0% | |
| !! | TCCTTGGCACTCGGTGTTGC+CGG | - | chr6_4:21766692-21766711 | Msa0982130:CDS | 60.0% |
| TCAGTGACTGCATGGCGCAC+TGG | - | chr6_4:21768582-21768601 | Msa0982130:intron | 60.0% | |
| TGCTGGTGACCGCACTGTTC+CGG | - | chr6_4:21768649-21768668 | Msa0982130:intron | 60.0% | |
| TGACCGCACTGTTCCGGTTG+AGG | - | chr6_4:21768655-21768674 | Msa0982130:intron | 60.0% | |
| GACGTAGGCGTAGCCTCCGT+GGG | + | chr6_4:21766589-21766608 | None:intergenic | 65.0% | |
| TTCTGCGGCGCGAATGTCGC+CGG | + | chr6_4:21766634-21766653 | None:intergenic | 65.0% | |
| AGCAGCTGCACTCCGGTCCT+TGG | - | chr6_4:21766676-21766695 | Msa0982130:CDS | 65.0% | |
| GCACTCCGGTCCTTGGCACT+CGG | - | chr6_4:21766683-21766702 | Msa0982130:CDS | 65.0% | |
| ACCGGCAACACCGAGTGCCA+AGG | + | chr6_4:21766696-21766715 | None:intergenic | 65.0% | |
| GAGTACGCGTCACGCCACAC+CGG | + | chr6_4:21766714-21766733 | None:intergenic | 65.0% | |
| GTGGCGTGACGCGTACTCGA+TGG | - | chr6_4:21766716-21766735 | Msa0982130:CDS | 65.0% | |
| GGACGTAGGCGTAGCCTCCG+TGG | + | chr6_4:21766590-21766609 | None:intergenic | 70.0% | |
| CGGCGGCGAGGGAGGACATA+CGG | + | chr6_4:21766611-21766630 | None:intergenic | 70.0% | |
| GCGTGGGAGCAGCTGCACTC+CGG | - | chr6_4:21766669-21766688 | Msa0982130:CDS | 70.0% | |
| !! | GGCACTCGGTGTTGCCGGTG+TGG | - | chr6_4:21766697-21766716 | Msa0982130:CDS | 70.0% |
| ATGTCCTCCCTCGCCGCCGC+CGG | - | chr6_4:21766612-21766631 | Msa0982130:CDS | 75.0% | |
| AATGTCGCCGGCGGCGGCGA+GGG | + | chr6_4:21766622-21766641 | None:intergenic | 75.0% | |
| TGCGGCGCGAATGTCGCCGG+CGG | + | chr6_4:21766631-21766650 | None:intergenic | 75.0% | |
| TCTGGGCAGGGCCTAGGGCG+AGG | + | chr6_4:21770223-21770242 | None:intergenic | 75.0% | |
| ! | GAATGTCGCCGGCGGCGGCG+AGG | + | chr6_4:21766623-21766642 | None:intergenic | 80.0% |
| ! | GGCGCGAATGTCGCCGGCGG+CGG | + | chr6_4:21766628-21766647 | None:intergenic | 80.0% |
| ! | GTCGCCGGCGGCGGCGAGGG+AGG | + | chr6_4:21766619-21766638 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 21766498 | 21771543 | 21766498 | ID=Msa0982130;Name=Msa0982130 |
| chr6_4 | mRNA | 21766498 | 21771543 | 21766498 | ID=Msa0982130-mRNA-1;Parent=Msa0982130;Name=Msa0982130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.6|0.5|1|1|1|6|49|413 |
| chr6_4 | exon | 21766498 | 21766735 | 21766498 | ID=Msa0982130-mRNA-1:exon:6797;Parent=Msa0982130-mRNA-1 |
| chr6_4 | exon | 21767306 | 21767398 | 21767306 | ID=Msa0982130-mRNA-1:exon:6796;Parent=Msa0982130-mRNA-1 |
| chr6_4 | exon | 21767914 | 21768057 | 21767914 | ID=Msa0982130-mRNA-1:exon:6795;Parent=Msa0982130-mRNA-1 |
| chr6_4 | exon | 21768166 | 21768300 | 21768166 | ID=Msa0982130-mRNA-1:exon:6794;Parent=Msa0982130-mRNA-1 |
| chr6_4 | exon | 21769365 | 21769574 | 21769365 | ID=Msa0982130-mRNA-1:exon:6793;Parent=Msa0982130-mRNA-1 |
| chr6_4 | exon | 21771073 | 21771543 | 21771073 | ID=Msa0982130-mRNA-1:exon:6792;Parent=Msa0982130-mRNA-1 |
| chr6_4 | CDS | 21771073 | 21771543 | 21771073 | ID=Msa0982130-mRNA-1:cds;Parent=Msa0982130-mRNA-1 |
| chr6_4 | CDS | 21769365 | 21769574 | 21769365 | ID=Msa0982130-mRNA-1:cds;Parent=Msa0982130-mRNA-1 |
| chr6_4 | CDS | 21768166 | 21768300 | 21768166 | ID=Msa0982130-mRNA-1:cds;Parent=Msa0982130-mRNA-1 |
| chr6_4 | CDS | 21767914 | 21768057 | 21767914 | ID=Msa0982130-mRNA-1:cds;Parent=Msa0982130-mRNA-1 |
| chr6_4 | CDS | 21767306 | 21767398 | 21767306 | ID=Msa0982130-mRNA-1:cds;Parent=Msa0982130-mRNA-1 |
| chr6_4 | CDS | 21766547 | 21766735 | 21766547 | ID=Msa0982130-mRNA-1:cds;Parent=Msa0982130-mRNA-1 |
| chr6_4 | three_prime_UTR | 21766498 | 21766546 | 21766498 | ID=Msa0982130-mRNA-1:three_prime_utr;Parent=Msa0982130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
