AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0844220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0844220 MtrunA17_Chr5g0415191 96.541 318 7 2 1 318 1 314 0.0 621
Msa0844220 MtrunA17_Chr4g0055931 48.309 207 65 5 3 190 1 184 2.36e-55 182
Msa0844220 MtrunA17_Chr2g0331031 48.095 210 60 6 3 185 1 188 1.42e-52 176
Msa0844220 MtrunA17_Chr4g0059701 54.680 203 56 7 24 211 8 189 3.03e-48 163
Msa0844220 MtrunA17_Chr6g0488471 47.368 171 78 4 3 170 1 162 3.29e-45 155
Msa0844220 MtrunA17_Chr8g0389241 40.796 201 96 6 5 190 4 196 9.80e-39 138
Msa0844220 MtrunA17_Chr3g0092621 74.118 85 19 2 105 187 84 167 4.46e-36 128
Msa0844220 MtrunA17_Chr3g0104071 68.966 87 25 1 94 178 134 220 4.92e-34 127
Msa0844220 MtrunA17_Chr4g0062741 72.603 73 20 0 99 171 132 204 2.80e-33 124
Msa0844220 MtrunA17_Chr1g0162081 71.233 73 21 0 99 171 116 188 1.45e-32 122
Msa0844220 MtrunA17_Chr5g0429521 70.513 78 23 0 99 176 126 203 1.98e-32 122
Msa0844220 MtrunA17_Chr3g0135671 40.113 177 79 5 1 169 1 158 2.31e-31 117
Msa0844220 MtrunA17_Chr7g0241761 67.949 78 25 0 99 176 134 211 4.17e-31 119
Msa0844220 MtrunA17_Chr1g0210471 68.421 76 24 0 96 171 115 190 9.25e-31 116
Msa0844220 MtrunA17_Chr5g0436501 50.847 118 53 2 92 207 112 226 9.11e-30 114
Msa0844220 MtrunA17_Chr6g0452791 58.537 82 24 1 105 186 80 151 3.96e-25 99.4
Msa0844220 MtrunA17_Chr5g0440731 40.385 104 56 2 99 196 99 202 4.55e-20 88.6
Msa0844220 MtrunA17_Chr5g0409841 50.617 81 34 2 98 172 81 161 1.01e-19 86.3
Msa0844220 MtrunA17_Chr5g0440741 35.032 157 90 6 107 255 102 254 1.88e-19 86.7
Msa0844220 MtrunA17_Chr5g0409831 65.455 55 19 0 98 152 70 124 1.62e-18 82.8
Msa0844220 MtrunA17_Chr8g0365011 47.436 78 27 2 107 170 94 171 6.94e-16 76.6
Msa0844220 MtrunA17_Chr8g0364731 61.017 59 21 1 114 170 10 68 1.01e-15 74.3
Msa0844220 MtrunA17_Chr5g0432921 45.455 77 39 2 97 171 105 180 6.15e-13 67.0
Msa0844220 MtrunA17_Chr1g0192061 48.571 70 32 2 107 173 63 131 9.53e-13 65.9
Msa0844220 MtrunA17_Chr5g0432941 49.254 67 31 2 107 171 115 180 3.06e-12 65.1
Msa0844220 MtrunA17_Chr3g0113121 45.833 72 32 1 107 171 97 168 6.09e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0844220 AT1G70000.1 48.632 329 88 12 3 318 1 261 1.76e-73 227
Msa0844220 AT1G70000.2 48.632 329 88 12 3 318 1 261 1.76e-73 227
Msa0844220 AT5G47390.1 51.872 187 53 3 3 174 1 165 1.08e-55 185
Msa0844220 AT5G61620.1 45.652 184 82 5 1 176 6 179 1.66e-46 160
Msa0844220 AT3G16350.1 43.162 234 65 5 3 185 1 217 1.93e-43 154
Msa0844220 AT5G56840.1 46.369 179 82 6 3 179 1 167 2.25e-43 149
Msa0844220 AT1G74840.2 52.551 196 55 5 20 199 15 188 2.49e-43 149
Msa0844220 AT1G74840.1 55.000 180 45 4 20 185 15 172 4.71e-43 149
Msa0844220 AT1G19000.2 51.515 198 52 6 20 195 13 188 1.21e-42 149
Msa0844220 AT1G19000.1 51.515 198 52 6 20 195 13 188 1.21e-42 149
Msa0844220 AT5G58900.1 64.773 88 29 1 95 180 129 216 2.04e-33 124
Msa0844220 AT1G49010.1 73.973 73 19 0 99 171 128 200 3.75e-33 124
Msa0844220 AT5G08520.1 69.863 73 22 0 99 171 112 184 8.77e-32 120
Msa0844220 AT2G38090.1 69.333 75 23 0 100 174 136 210 1.14e-31 120
Msa0844220 AT5G04760.1 73.611 72 19 0 100 171 94 165 3.35e-31 117
Msa0844220 AT5G01200.1 67.123 73 24 0 99 171 140 212 1.54e-29 114
Msa0844220 AT3G11280.2 60.976 82 32 0 94 175 116 197 1.64e-28 111
Msa0844220 AT3G11280.1 60.976 82 32 0 94 175 116 197 1.64e-28 111
Msa0844220 AT5G05790.2 59.756 82 33 0 94 175 120 201 1.06e-27 109
Msa0844220 AT5G05790.1 59.756 82 33 0 94 175 120 201 1.06e-27 109
Msa0844220 AT5G23650.1 56.579 76 33 0 95 170 110 185 5.19e-22 95.1
Msa0844220 AT3G10580.2 57.143 70 28 1 101 170 91 158 1.27e-21 92.4
Msa0844220 AT4G09450.1 51.685 89 39 2 86 170 68 156 1.90e-21 90.5
Msa0844220 AT3G10580.1 57.143 70 28 1 101 170 91 158 2.11e-21 92.4
Msa0844220 AT3G10590.1 50.617 81 37 2 95 173 99 178 6.60e-19 84.0

Find 144 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTAATATGATTAAGAATT+TGG 0.086398 5_4:+22544482 Msa0844220:three_prime_UTR
TCTCTACTTAATTAATTTAT+TGG 0.135934 5_4:-22544381 None:intergenic
GAGAGATGATTTGCGAGATT+TGG 0.170674 5_4:-22542456 None:intergenic
TTAAATTGAGAAAGATAAAA+TGG 0.218744 5_4:+22544590 Msa0844220:three_prime_UTR
AGCATTGGTGTTGGCCTAAT+TGG 0.245624 5_4:-22544036 None:intergenic
GATCCTTGTTTCTATTTGTC+TGG 0.263941 5_4:+22544651 Msa0844220:three_prime_UTR
TTAAATTTCAAATATTAGTT+TGG 0.289881 5_4:+22544750 Msa0844220:three_prime_UTR
ATCTCCGGCGGCGGCGGTTC+TGG 0.294270 5_4:-22543199 None:intergenic
GGGTACTCTTGGTCTCTTAT+TGG 0.298397 5_4:+22544704 Msa0844220:three_prime_UTR
GACGAATGGCTGCTACTTTC+CGG 0.303324 5_4:-22544180 None:intergenic
ATGAATCATGAGAATGATTA+TGG 0.312226 5_4:+22544461 Msa0844220:three_prime_UTR
AGAGATGATTTGCGAGATTT+GGG 0.316990 5_4:-22542455 None:intergenic
CTGACCTCGTTTGCGTTCTC+TGG 0.320215 5_4:-22542939 None:intergenic
TGGTGGTGGTGGTGTTGGGG+TGG 0.323947 5_4:-22542769 None:intergenic
GCATATCCATCTTCACATTA+TGG 0.334586 5_4:+22543934 Msa0844220:CDS
ATTTGCGAGATTTGGGTGAT+AGG 0.341860 5_4:-22542448 None:intergenic
GGTGTTGTTGGTTGTGGTGG+TGG 0.346000 5_4:-22542786 None:intergenic
ATCCTTGTTTCTATTTGTCT+GGG 0.353863 5_4:+22544652 Msa0844220:three_prime_UTR
GATGGAACCTTCAACTATAA+TGG 0.360343 5_4:+22543855 Msa0844220:CDS
CTAGAAACTTTGTGAAAACT+AGG 0.361627 5_4:+22543123 Msa0844220:CDS
AAAGAGTGGCCAAGCCAATT+AGG 0.366908 5_4:+22544022 Msa0844220:CDS
AGGTGATTAGCCGAATTAAT+TGG 0.370332 5_4:+22544536 Msa0844220:three_prime_UTR
GTTGTTGGTTGTGGTGGTGG+TGG 0.377166 5_4:-22542783 None:intergenic
CTCATTACCGGCAATGTTAC+CGG 0.380041 5_4:-22543994 None:intergenic
GTTGGTTGTGGTGGTGGTGG+TGG 0.391204 5_4:-22542780 None:intergenic
GTTCTTGTTGGGCTTGCAAC+AGG 0.393335 5_4:+22543073 Msa0844220:CDS
AGGGTTGTTGATGGTGTTGT+TGG 0.396334 5_4:-22542798 None:intergenic
GACTGGATCTCCGGCGGCGG+CGG 0.396452 5_4:-22543205 None:intergenic
GAACACAAGTTGTTCTTGTT+GGG 0.400759 5_4:+22543062 Msa0844220:CDS
GAGTGTGACCTTGAAGTGAT+AGG 0.402284 5_4:+22544676 Msa0844220:three_prime_UTR
TTGTAAATTGAGGTTAAAGT+TGG 0.402565 5_4:+22544330 Msa0844220:three_prime_UTR
ACTCTTTCAGCACTCATTAC+CGG 0.403021 5_4:-22544006 None:intergenic
GTCATTGAAGCTGCAACCTT+CGG 0.407621 5_4:+22544137 Msa0844220:CDS
TGTTGCTTGAAAATTTAGTT+TGG 0.417854 5_4:+22544281 Msa0844220:exon
GTTGATGGTGTTGTTGGTTG+TGG 0.418341 5_4:-22542792 None:intergenic
ATAATATAAGTAGGAGGACT+AGG 0.428357 5_4:+22544411 Msa0844220:three_prime_UTR
AAAAGGAAGAAGATAATGTT+AGG 0.428858 5_4:+22544507 Msa0844220:three_prime_UTR
TCATCTTCCATTATAGTTGA+AGG 0.430302 5_4:-22543862 None:intergenic
TCTTGGTCCGGTAACATTGC+CGG 0.432456 5_4:+22543987 Msa0844220:CDS
CCCATTGCCCTATCACTTCA+AGG 0.434219 5_4:-22544684 None:intergenic
GTTGGGGTGGTTGTTTCCTC+CGG 0.442684 5_4:-22542756 None:intergenic
AAGATAATGTTAGGTTATGT+AGG 0.445982 5_4:+22544516 Msa0844220:three_prime_UTR
TAAATTGAGAAAGATAAAAT+GGG 0.445990 5_4:+22544591 Msa0844220:three_prime_UTR
AGAACACAAGTTGTTCTTGT+TGG 0.452936 5_4:+22543061 Msa0844220:CDS
AACAGGTTGGTAAAGGTGAT+TGG 0.456244 5_4:+22543090 Msa0844220:CDS
CACATTATGGCGGTATCCCC+GGG 0.456601 5_4:+22543947 Msa0844220:CDS
TTGGTCTATTTCTTGCAACT+TGG 0.457256 5_4:+22544723 Msa0844220:three_prime_UTR
ATGGCTGCAGGGAAGTATAA+TGG 0.461919 5_4:+22544234 Msa0844220:CDS
TCTAGATTATGTTCCTTACA+TGG 0.465854 5_4:+22542573 Msa0844220:five_prime_UTR
TCACATTATGGCGGTATCCC+CGG 0.469456 5_4:+22543946 Msa0844220:CDS
TGCTCAAATCAATCCATGTA+AGG 0.470782 5_4:-22542586 None:intergenic
GAGGATAATATAATATAAGT+AGG 0.483430 5_4:+22544402 Msa0844220:three_prime_UTR
GATGTCATCGGATACATAAC+CGG 0.484684 5_4:-22542897 None:intergenic
CAAATATTAGTTTGGACAAG+AGG 0.487817 5_4:+22544758 Msa0844220:three_prime_UTR
ACCCATCGGAAAAGGTGTCC+CGG 0.489443 5_4:-22543965 None:intergenic
GATACATAACCGGCATCCGC+GGG 0.489451 5_4:-22542887 None:intergenic
TGGTTGGTGAAGGTGTTCCT+TGG 0.492029 5_4:+22543030 Msa0844220:intron
CCCATCGGAAAAGGTGTCCC+GGG 0.492080 5_4:-22543964 None:intergenic
GGCTTGCAACAGGTTGGTAA+AGG 0.494742 5_4:+22543083 Msa0844220:CDS
AGATTAGCCATCTTAGAAGA+AGG 0.500963 5_4:-22544063 None:intergenic
TGGTGTTGGCCTAATTGGCT+TGG 0.501496 5_4:-22544031 None:intergenic
GATAGGGCAATGGGTACTCT+TGG 0.503022 5_4:+22544693 Msa0844220:three_prime_UTR
GATGACATCGTTCACGCCTC+TGG 0.506341 5_4:+22542911 Msa0844220:CDS
AGCTTCAATGACAATGGAAA+AGG 0.506440 5_4:-22544126 None:intergenic
CCTTGAAGTGATAGGGCAAT+GGG 0.508448 5_4:+22544684 Msa0844220:three_prime_UTR
ATAACCGGCATCCGCGGGGT+TGG 0.510315 5_4:-22542882 None:intergenic
CGTTGCATGTTCTCGAGTTG+TGG 0.513462 5_4:-22542688 None:intergenic
TCCTTGTTTCTATTTGTCTG+GGG 0.514391 5_4:+22544653 Msa0844220:three_prime_UTR
TGTGAAGATGGATATGCGGC+GGG 0.518568 5_4:-22543928 None:intergenic
GGACCAAGACCCATCGGAAA+AGG 0.520312 5_4:-22543973 None:intergenic
GCTGCCTCCTTCTTCTAAGA+TGG 0.520621 5_4:+22544056 Msa0844220:CDS
TTGACTTGGTTTGTAAATTG+AGG 0.520915 5_4:+22544320 Msa0844220:three_prime_UTR
TAGCAGCCATTCGTCGTCAT+CGG 0.522877 5_4:+22544188 Msa0844220:CDS
GATGGTGTTGTTGGTTGTGG+TGG 0.524552 5_4:-22542789 None:intergenic
GGTGGTAATATCAAAGAGAC+TGG 0.526759 5_4:-22543222 None:intergenic
TTAGAAGAAGGAGGCAGCAT+TGG 0.530338 5_4:-22544051 None:intergenic
CCTTGTTTCTATTTGTCTGG+GGG 0.531089 5_4:+22544654 Msa0844220:three_prime_UTR
TAATATAAGTAGGAGGACTA+GGG 0.533602 5_4:+22544412 Msa0844220:three_prime_UTR
GATTCCAACCCCGCGGATGC+CGG 0.538280 5_4:+22542878 Msa0844220:CDS
AGAGACTGGATCTCCGGCGG+CGG 0.543258 5_4:-22543208 None:intergenic
TTGTGTTCTTCCTCTGTCCA+AGG 0.544021 5_4:-22543047 None:intergenic
GCAGGGAAGTATAATGGTGG+GGG 0.547007 5_4:+22544240 Msa0844220:CDS
ATAACCAGAACCGCCGCCGC+CGG 0.548822 5_4:+22543195 Msa0844220:CDS
TATCAAAGAGACTGGATCTC+CGG 0.548838 5_4:-22543214 None:intergenic
GTGGTTGTTCATATTGAGAG+AGG 0.549802 5_4:-22542847 None:intergenic
CTTTGATATTACCACCGATA+CGG 0.550867 5_4:+22543229 Msa0844220:CDS
TGATTAGCCGAATTAATTGG+TGG 0.556070 5_4:+22544539 Msa0844220:three_prime_UTR
TTGTTCATATTGAGAGAGGT+TGG 0.557080 5_4:-22542843 None:intergenic
GGGTTGGAATCTTGTGGAGG+TGG 0.557505 5_4:-22542866 None:intergenic
TTGTTGGGCTTGCAACAGGT+TGG 0.558381 5_4:+22543077 Msa0844220:CDS
AGTGTGACCTTGAAGTGATA+GGG 0.559552 5_4:+22544677 Msa0844220:three_prime_UTR
GCTGCAACCTTCGGTTCCAT+CGG 0.562274 5_4:+22544146 Msa0844220:CDS
TTGAGAAAGATAAAATGGGT+TGG 0.562383 5_4:+22544595 Msa0844220:three_prime_UTR
ATACCGCCATAATGTGAAGA+TGG 0.562831 5_4:-22543940 None:intergenic
ATTATACTTCCCTGCAGCCA+TGG 0.565515 5_4:-22544232 None:intergenic
TCCGGTGAATGATCTTCCGA+TGG 0.572768 5_4:-22544162 None:intergenic
TCCGCGGGGTTGGAATCTTG+TGG 0.576478 5_4:-22542872 None:intergenic
AAGAACAAATATTACCGTAT+CGG 0.577972 5_4:-22543243 None:intergenic
GAAGGAGGCAGCATTGGTGT+TGG 0.579116 5_4:-22544045 None:intergenic
CTGCAGGGAAGTATAATGGT+GGG 0.579931 5_4:+22544238 Msa0844220:CDS
TGCAGGGAAGTATAATGGTG+GGG 0.579949 5_4:+22544239 Msa0844220:CDS
GGCGGCGGTTCTGGTTATGA+CGG 0.580334 5_4:-22543190 None:intergenic
GCATGACTTGCAACCTGAGT+TGG 0.584887 5_4:-22543149 None:intergenic
TGAAGATGGATATGCGGCGG+GGG 0.585757 5_4:-22543926 None:intergenic
TGACAATGGAAAAGGCTCGA+TGG 0.586187 5_4:-22544118 None:intergenic
TGATCTTCCGATGGAACCGA+AGG 0.587262 5_4:-22544153 None:intergenic
TGCTCACAGTGCGGCAACAA+CGG 0.587587 5_4:+22542665 Msa0844220:CDS
GATAATATAATATAAGTAGG+AGG 0.590162 5_4:+22544405 Msa0844220:three_prime_UTR
AACAAATATTACCGTATCGG+TGG 0.590836 5_4:-22543240 None:intergenic
GAAAACTAGGACACCAACTC+AGG 0.594289 5_4:+22543136 Msa0844220:CDS
ACCTTGAAGTGATAGGGCAA+TGG 0.597131 5_4:+22544683 Msa0844220:three_prime_UTR
ATAAGTAGGAGGACTAGGGA+GGG 0.607813 5_4:+22544416 Msa0844220:three_prime_UTR
AATAAATTAATTAAGTAGAG+AGG 0.609464 5_4:+22544383 Msa0844220:three_prime_UTR
GGTTGCAGCTTCAATGACAA+TGG 0.610541 5_4:-22544132 None:intergenic
GCGTTCTCTGGATCGACCAG+AGG 0.617091 5_4:-22542927 None:intergenic
ATGAAGCCGATGACGACGAA+TGG 0.619919 5_4:-22544194 None:intergenic
TGAAGGTGTTCCTTGGACAG+AGG 0.622183 5_4:+22543037 Msa0844220:intron
TCGAGAACATGCAACGACGG+TGG 0.622712 5_4:+22542695 Msa0844220:CDS
GGTTCTGGTTATGACGGCGG+AGG 0.625551 5_4:-22543184 None:intergenic
ATGTGAAGATGGATATGCGG+CGG 0.625832 5_4:-22543929 None:intergenic
GGACTAGGGAGGGACTAGAG+AGG 0.625911 5_4:+22544426 Msa0844220:three_prime_UTR
GGATACATAACCGGCATCCG+CGG 0.626209 5_4:-22542888 None:intergenic
AGAGGCGTGAACGATGTCAT+CGG 0.629917 5_4:-22542909 None:intergenic
TCCATCGGAAGATCATTCAC+CGG 0.635009 5_4:+22544161 Msa0844220:CDS
GTTACCGGACCAAGACCCAT+CGG 0.636658 5_4:-22543979 None:intergenic
TTTGGTGTTCGACTCACCGG+AGG 0.638984 5_4:+22542740 Msa0844220:CDS
TATAAGTAGGAGGACTAGGG+AGG 0.640458 5_4:+22544415 Msa0844220:three_prime_UTR
AACTCGAGAACATGCAACGA+CGG 0.649079 5_4:+22542692 Msa0844220:CDS
GCTGCAGGGAAGTATAATGG+TGG 0.654189 5_4:+22544237 Msa0844220:CDS
GGTAATGAGTGCTGAAAGAG+TGG 0.656043 5_4:+22544008 Msa0844220:CDS
CGATCCAGAGAACGCAAACG+AGG 0.663587 5_4:+22542935 Msa0844220:CDS
GTTGGTAAAGGTGATTGGAG+AGG 0.666734 5_4:+22543095 Msa0844220:CDS
TTAGCCATCTTAGAAGAAGG+AGG 0.666938 5_4:-22544060 None:intergenic
GCGGGGTTGGAATCTTGTGG+AGG 0.674293 5_4:-22542869 None:intergenic
GGCGGTTCTGGTTATGACGG+CGG 0.676927 5_4:-22543187 None:intergenic
CAAAGAGACTGGATCTCCGG+CGG 0.680570 5_4:-22543211 None:intergenic
TCTCGCACGTGCTCACAGTG+CGG 0.694033 5_4:+22542656 Msa0844220:CDS
CCATCGGAAAAGGTGTCCCG+GGG 0.697702 5_4:-22543963 None:intergenic
TCAATTTCAGCAAGAAACAG+TGG 0.701868 5_4:+22543885 Msa0844220:CDS
TATCCATCTTCACATTATGG+CGG 0.712230 5_4:+22543937 Msa0844220:CDS
ATAATGTGAAGATGGATATG+CGG 0.713042 5_4:-22543932 None:intergenic
GTGAAGATGGATATGCGGCG+GGG 0.716036 5_4:-22543927 None:intergenic
TCCACAAGATTCCAACCCCG+CGG 0.717102 5_4:+22542871 Msa0844220:CDS
ATACATAACCGGCATCCGCG+GGG 0.725166 5_4:-22542886 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTAATGTTTTTTGTTT+TGG + chr5_4:22543010-22543029 Msa0844220:intron 10.0%
!! GAAATTGTTAAAAATATAAA+AGG - chr5_4:22543293-22543312 None:intergenic 10.0%
!! TAAAATCAAATTATTAGAAA+AGG - chr5_4:22543315-22543334 None:intergenic 10.0%
!! ATTATATATTATTAATGTAG+AGG + chr5_4:22543580-22543599 Msa0844220:intron 10.0%
!! TTAAATTTCAAATATTAGTT+TGG + chr5_4:22544750-22544769 Msa0844220:three_prime_UTR 10.0%
!!! TATATTAATGTTTTTTGTTT+TGG + chr5_4:22543010-22543029 Msa0844220:intron 10.0%
!! GAAATTGTTAAAAATATAAA+AGG - chr5_4:22543293-22543312 None:intergenic 10.0%
!! TAAAATCAAATTATTAGAAA+AGG - chr5_4:22543315-22543334 None:intergenic 10.0%
!! ATTATATATTATTAATGTAG+AGG + chr5_4:22543580-22543599 Msa0844220:intron 10.0%
!! TTAAATTTCAAATATTAGTT+TGG + chr5_4:22544750-22544769 Msa0844220:three_prime_UTR 10.0%
!! AATTATACGGAATATATTTA+AGG - chr5_4:22543369-22543388 None:intergenic 15.0%
!!! CTTTGAAAAGTAAAATTATA+CGG - chr5_4:22543382-22543401 None:intergenic 15.0%
!! TCTCTACTTAATTAATTTAT+TGG - chr5_4:22544384-22544403 None:intergenic 15.0%
!! AATAAATTAATTAAGTAGAG+AGG + chr5_4:22544383-22544402 Msa0844220:three_prime_UTR 15.0%
!! TTAAATTGAGAAAGATAAAA+TGG + chr5_4:22544590-22544609 Msa0844220:three_prime_UTR 15.0%
!! TAAATTGAGAAAGATAAAAT+GGG + chr5_4:22544591-22544610 Msa0844220:three_prime_UTR 15.0%
!!! ATATTCTATTCTATTTTGTA+TGG + chr5_4:22544619-22544638 Msa0844220:three_prime_UTR 15.0%
!! AATTATACGGAATATATTTA+AGG - chr5_4:22543369-22543388 None:intergenic 15.0%
!!! CTTTGAAAAGTAAAATTATA+CGG - chr5_4:22543382-22543401 None:intergenic 15.0%
!! TCTCTACTTAATTAATTTAT+TGG - chr5_4:22544384-22544403 None:intergenic 15.0%
!! AATAAATTAATTAAGTAGAG+AGG + chr5_4:22544383-22544402 Msa0844220:three_prime_UTR 15.0%
!! TTAAATTGAGAAAGATAAAA+TGG + chr5_4:22544590-22544609 Msa0844220:three_prime_UTR 15.0%
!! TAAATTGAGAAAGATAAAAT+GGG + chr5_4:22544591-22544610 Msa0844220:three_prime_UTR 15.0%
!!! ATATTCTATTCTATTTTGTA+TGG + chr5_4:22544619-22544638 Msa0844220:three_prime_UTR 15.0%
!!! TTAATGTTTTTTGTTTTGGT+TGG + chr5_4:22543014-22543033 Msa0844220:intron 20.0%
!!! TTTTCAAAGTAATAATGATG+AGG + chr5_4:22543393-22543412 Msa0844220:intron 20.0%
!!! GGTTTTCTATTTTTTTTCTT+GGG - chr5_4:22544363-22544382 None:intergenic 20.0%
!!! TGGTTTTCTATTTTTTTTCT+TGG - chr5_4:22544364-22544383 None:intergenic 20.0%
!! GAGGATAATATAATATAAGT+AGG + chr5_4:22544402-22544421 Msa0844220:three_prime_UTR 20.0%
!! GATAATATAATATAAGTAGG+AGG + chr5_4:22544405-22544424 Msa0844220:three_prime_UTR 20.0%
!! GGTTAATATGATTAAGAATT+TGG + chr5_4:22544482-22544501 Msa0844220:three_prime_UTR 20.0%
!! TGATTAAGAATTTGGAAAAA+AGG + chr5_4:22544490-22544509 Msa0844220:three_prime_UTR 20.0%
!!! TTAATGTTTTTTGTTTTGGT+TGG + chr5_4:22543014-22543033 Msa0844220:intron 20.0%
!!! TTTTCAAAGTAATAATGATG+AGG + chr5_4:22543393-22543412 Msa0844220:intron 20.0%
!!! GGTTTTCTATTTTTTTTCTT+GGG - chr5_4:22544363-22544382 None:intergenic 20.0%
!!! TGGTTTTCTATTTTTTTTCT+TGG - chr5_4:22544364-22544383 None:intergenic 20.0%
!! GAGGATAATATAATATAAGT+AGG + chr5_4:22544402-22544421 Msa0844220:three_prime_UTR 20.0%
!! GATAATATAATATAAGTAGG+AGG + chr5_4:22544405-22544424 Msa0844220:three_prime_UTR 20.0%
!! GGTTAATATGATTAAGAATT+TGG + chr5_4:22544482-22544501 Msa0844220:three_prime_UTR 20.0%
!! TGATTAAGAATTTGGAAAAA+AGG + chr5_4:22544490-22544509 Msa0844220:three_prime_UTR 20.0%
!!! GAAAAAAGCATCATGATTTT+TGG + chr5_4:22542722-22542741 Msa0844220:CDS 25.0%
! AAGAACAAATATTACCGTAT+CGG - chr5_4:22543246-22543265 None:intergenic 25.0%
!! TCATTAATGTAATTTTGCCT+TGG + chr5_4:22543816-22543835 Msa0844220:intron 25.0%
!!! TGCCTTGGATTATTTATTTT+AGG + chr5_4:22543831-22543850 Msa0844220:intron 25.0%
! CACCTAAAATAAATAATCCA+AGG - chr5_4:22543836-22543855 None:intergenic 25.0%
!!! GGATTATTTATTTTAGGTGA+TGG + chr5_4:22543837-22543856 Msa0844220:intron 25.0%
!! TGTTGCTTGAAAATTTAGTT+TGG + chr5_4:22544281-22544300 Msa0844220:exon 25.0%
! TTGTAAATTGAGGTTAAAGT+TGG + chr5_4:22544330-22544349 Msa0844220:three_prime_UTR 25.0%
! ATGAATCATGAGAATGATTA+TGG + chr5_4:22544461-22544480 Msa0844220:three_prime_UTR 25.0%
! AAAAGGAAGAAGATAATGTT+AGG + chr5_4:22544507-22544526 Msa0844220:three_prime_UTR 25.0%
! AAGATAATGTTAGGTTATGT+AGG + chr5_4:22544516-22544535 Msa0844220:three_prime_UTR 25.0%
!!! GAAAAAAGCATCATGATTTT+TGG + chr5_4:22542722-22542741 Msa0844220:CDS 25.0%
! AAGAACAAATATTACCGTAT+CGG - chr5_4:22543246-22543265 None:intergenic 25.0%
!! TCATTAATGTAATTTTGCCT+TGG + chr5_4:22543816-22543835 Msa0844220:intron 25.0%
!!! TGCCTTGGATTATTTATTTT+AGG + chr5_4:22543831-22543850 Msa0844220:intron 25.0%
! CACCTAAAATAAATAATCCA+AGG - chr5_4:22543836-22543855 None:intergenic 25.0%
!!! GGATTATTTATTTTAGGTGA+TGG + chr5_4:22543837-22543856 Msa0844220:intron 25.0%
!! TGTTGCTTGAAAATTTAGTT+TGG + chr5_4:22544281-22544300 Msa0844220:exon 25.0%
! TTGTAAATTGAGGTTAAAGT+TGG + chr5_4:22544330-22544349 Msa0844220:three_prime_UTR 25.0%
! ATGAATCATGAGAATGATTA+TGG + chr5_4:22544461-22544480 Msa0844220:three_prime_UTR 25.0%
! AAAAGGAAGAAGATAATGTT+AGG + chr5_4:22544507-22544526 Msa0844220:three_prime_UTR 25.0%
! AAGATAATGTTAGGTTATGT+AGG + chr5_4:22544516-22544535 Msa0844220:three_prime_UTR 25.0%
GATGTGAAAAAAAGAGAGAA+GGG - chr5_4:22542531-22542550 None:intergenic 30.0%
TGATGTGAAAAAAAGAGAGA+AGG - chr5_4:22542532-22542551 None:intergenic 30.0%
TCTAGATTATGTTCCTTACA+TGG + chr5_4:22542573-22542592 Msa0844220:five_prime_UTR 30.0%
!!! TTTTTTGTTTTGGTTGGTGA+AGG + chr5_4:22543020-22543039 Msa0844220:intron 30.0%
CTAGAAACTTTGTGAAAACT+AGG + chr5_4:22543123-22543142 Msa0844220:CDS 30.0%
ATGAGCTTATGTCAATTGAT+AGG - chr5_4:22543616-22543635 None:intergenic 30.0%
TGTCCGGAGATAATATATTT+GGG - chr5_4:22543674-22543693 None:intergenic 30.0%
ATGTCCGGAGATAATATATT+TGG - chr5_4:22543675-22543694 None:intergenic 30.0%
TCATCTTCCATTATAGTTGA+AGG - chr5_4:22543865-22543884 None:intergenic 30.0%
ATAATGTGAAGATGGATATG+CGG - chr5_4:22543935-22543954 None:intergenic 30.0%
!!! AGTTTGGTCAAGTTTTTTCT+TGG + chr5_4:22544297-22544316 Msa0844220:three_prime_UTR 30.0%
!!! AAGTTTTTTCTTGGTTGACT+TGG + chr5_4:22544306-22544325 Msa0844220:three_prime_UTR 30.0%
!! TTGACTTGGTTTGTAAATTG+AGG + chr5_4:22544320-22544339 Msa0844220:three_prime_UTR 30.0%
ATAATATAAGTAGGAGGACT+AGG + chr5_4:22544411-22544430 Msa0844220:three_prime_UTR 30.0%
TAATATAAGTAGGAGGACTA+GGG + chr5_4:22544412-22544431 Msa0844220:three_prime_UTR 30.0%
CCAAAAACCACCAATTAATT+CGG - chr5_4:22544549-22544568 None:intergenic 30.0%
TTGAGAAAGATAAAATGGGT+TGG + chr5_4:22544595-22544614 Msa0844220:three_prime_UTR 30.0%
! ATTCTATTTTGTATGGCTGT+TGG + chr5_4:22544626-22544645 Msa0844220:three_prime_UTR 30.0%
! TTCTATTTTGTATGGCTGTT+GGG + chr5_4:22544627-22544646 Msa0844220:three_prime_UTR 30.0%
!! ATCCTTGTTTCTATTTGTCT+GGG + chr5_4:22544652-22544671 Msa0844220:three_prime_UTR 30.0%
! CAAATATTAGTTTGGACAAG+AGG + chr5_4:22544758-22544777 Msa0844220:three_prime_UTR 30.0%
GATGTGAAAAAAAGAGAGAA+GGG - chr5_4:22542531-22542550 None:intergenic 30.0%
TGATGTGAAAAAAAGAGAGA+AGG - chr5_4:22542532-22542551 None:intergenic 30.0%
TCTAGATTATGTTCCTTACA+TGG + chr5_4:22542573-22542592 Msa0844220:five_prime_UTR 30.0%
!!! TTTTTTGTTTTGGTTGGTGA+AGG + chr5_4:22543020-22543039 Msa0844220:intron 30.0%
CTAGAAACTTTGTGAAAACT+AGG + chr5_4:22543123-22543142 Msa0844220:CDS 30.0%
ATGAGCTTATGTCAATTGAT+AGG - chr5_4:22543616-22543635 None:intergenic 30.0%
TGTCCGGAGATAATATATTT+GGG - chr5_4:22543674-22543693 None:intergenic 30.0%
ATGTCCGGAGATAATATATT+TGG - chr5_4:22543675-22543694 None:intergenic 30.0%
TCATCTTCCATTATAGTTGA+AGG - chr5_4:22543865-22543884 None:intergenic 30.0%
ATAATGTGAAGATGGATATG+CGG - chr5_4:22543935-22543954 None:intergenic 30.0%
!!! AGTTTGGTCAAGTTTTTTCT+TGG + chr5_4:22544297-22544316 Msa0844220:three_prime_UTR 30.0%
!!! AAGTTTTTTCTTGGTTGACT+TGG + chr5_4:22544306-22544325 Msa0844220:three_prime_UTR 30.0%
!! TTGACTTGGTTTGTAAATTG+AGG + chr5_4:22544320-22544339 Msa0844220:three_prime_UTR 30.0%
ATAATATAAGTAGGAGGACT+AGG + chr5_4:22544411-22544430 Msa0844220:three_prime_UTR 30.0%
TAATATAAGTAGGAGGACTA+GGG + chr5_4:22544412-22544431 Msa0844220:three_prime_UTR 30.0%
CCAAAAACCACCAATTAATT+CGG - chr5_4:22544549-22544568 None:intergenic 30.0%
TTGAGAAAGATAAAATGGGT+TGG + chr5_4:22544595-22544614 Msa0844220:three_prime_UTR 30.0%
! ATTCTATTTTGTATGGCTGT+TGG + chr5_4:22544626-22544645 Msa0844220:three_prime_UTR 30.0%
! TTCTATTTTGTATGGCTGTT+GGG + chr5_4:22544627-22544646 Msa0844220:three_prime_UTR 30.0%
!! ATCCTTGTTTCTATTTGTCT+GGG + chr5_4:22544652-22544671 Msa0844220:three_prime_UTR 30.0%
! CAAATATTAGTTTGGACAAG+AGG + chr5_4:22544758-22544777 Msa0844220:three_prime_UTR 30.0%
! AGAGATGATTTGCGAGATTT+GGG - chr5_4:22542458-22542477 None:intergenic 35.0%
TGCTCAAATCAATCCATGTA+AGG - chr5_4:22542589-22542608 None:intergenic 35.0%
!! TTTTCTGAAAGGGTTGTTGA+TGG - chr5_4:22542810-22542829 None:intergenic 35.0%
!!! TGCTAGCACTTTTTCTGAAA+GGG - chr5_4:22542820-22542839 None:intergenic 35.0%
!!! ATGCTAGCACTTTTTCTGAA+AGG - chr5_4:22542821-22542840 None:intergenic 35.0%
TTGTTCATATTGAGAGAGGT+TGG - chr5_4:22542846-22542865 None:intergenic 35.0%
AGAACACAAGTTGTTCTTGT+TGG + chr5_4:22543061-22543080 Msa0844220:CDS 35.0%
GAACACAAGTTGTTCTTGTT+GGG + chr5_4:22543062-22543081 Msa0844220:CDS 35.0%
CTTTGATATTACCACCGATA+CGG + chr5_4:22543229-22543248 Msa0844220:CDS 35.0%
AACAAATATTACCGTATCGG+TGG - chr5_4:22543243-22543262 None:intergenic 35.0%
! GATAATATATTTGGGACGGA+GGG - chr5_4:22543666-22543685 None:intergenic 35.0%
! AGATAATATATTTGGGACGG+AGG - chr5_4:22543667-22543686 None:intergenic 35.0%
CGGAGATAATATATTTGGGA+CGG - chr5_4:22543670-22543689 None:intergenic 35.0%
CGTCCCAAATATATTATCTC+CGG + chr5_4:22543668-22543687 Msa0844220:intron 35.0%
CGTTCGCAAAAATATATGTC+CGG - chr5_4:22543690-22543709 None:intergenic 35.0%
GATGGAACCTTCAACTATAA+TGG + chr5_4:22543855-22543874 Msa0844220:CDS 35.0%
TCAATTTCAGCAAGAAACAG+TGG + chr5_4:22543885-22543904 Msa0844220:CDS 35.0%
GCATATCCATCTTCACATTA+TGG + chr5_4:22543934-22543953 Msa0844220:CDS 35.0%
TATCCATCTTCACATTATGG+CGG + chr5_4:22543937-22543956 Msa0844220:CDS 35.0%
! AGATTAGCCATCTTAGAAGA+AGG - chr5_4:22544066-22544085 None:intergenic 35.0%
AGCTTCAATGACAATGGAAA+AGG - chr5_4:22544129-22544148 None:intergenic 35.0%
!!! ATCATCGCCTTTTAAAACCA+TGG + chr5_4:22544215-22544234 Msa0844220:CDS 35.0%
! AGGTGATTAGCCGAATTAAT+TGG + chr5_4:22544536-22544555 Msa0844220:three_prime_UTR 35.0%
! TGATTAGCCGAATTAATTGG+TGG + chr5_4:22544539-22544558 Msa0844220:three_prime_UTR 35.0%
!! CCGAATTAATTGGTGGTTTT+TGG + chr5_4:22544546-22544565 Msa0844220:three_prime_UTR 35.0%
!!! TGGTTTTTGGTGTACATGTT+TGG + chr5_4:22544559-22544578 Msa0844220:three_prime_UTR 35.0%
! TCTATTTTGTATGGCTGTTG+GGG + chr5_4:22544628-22544647 Msa0844220:three_prime_UTR 35.0%
!! GATCCTTGTTTCTATTTGTC+TGG + chr5_4:22544651-22544670 Msa0844220:three_prime_UTR 35.0%
!! TCCTTGTTTCTATTTGTCTG+GGG + chr5_4:22544653-22544672 Msa0844220:three_prime_UTR 35.0%
! TTGGTCTATTTCTTGCAACT+TGG + chr5_4:22544723-22544742 Msa0844220:three_prime_UTR 35.0%
! AGAGATGATTTGCGAGATTT+GGG - chr5_4:22542458-22542477 None:intergenic 35.0%
TGCTCAAATCAATCCATGTA+AGG - chr5_4:22542589-22542608 None:intergenic 35.0%
!! TTTTCTGAAAGGGTTGTTGA+TGG - chr5_4:22542810-22542829 None:intergenic 35.0%
!!! TGCTAGCACTTTTTCTGAAA+GGG - chr5_4:22542820-22542839 None:intergenic 35.0%
!!! ATGCTAGCACTTTTTCTGAA+AGG - chr5_4:22542821-22542840 None:intergenic 35.0%
TTGTTCATATTGAGAGAGGT+TGG - chr5_4:22542846-22542865 None:intergenic 35.0%
AGAACACAAGTTGTTCTTGT+TGG + chr5_4:22543061-22543080 Msa0844220:CDS 35.0%
GAACACAAGTTGTTCTTGTT+GGG + chr5_4:22543062-22543081 Msa0844220:CDS 35.0%
CTTTGATATTACCACCGATA+CGG + chr5_4:22543229-22543248 Msa0844220:CDS 35.0%
AACAAATATTACCGTATCGG+TGG - chr5_4:22543243-22543262 None:intergenic 35.0%
! GATAATATATTTGGGACGGA+GGG - chr5_4:22543666-22543685 None:intergenic 35.0%
! AGATAATATATTTGGGACGG+AGG - chr5_4:22543667-22543686 None:intergenic 35.0%
CGGAGATAATATATTTGGGA+CGG - chr5_4:22543670-22543689 None:intergenic 35.0%
CGTCCCAAATATATTATCTC+CGG + chr5_4:22543668-22543687 Msa0844220:intron 35.0%
CGTTCGCAAAAATATATGTC+CGG - chr5_4:22543690-22543709 None:intergenic 35.0%
GATGGAACCTTCAACTATAA+TGG + chr5_4:22543855-22543874 Msa0844220:CDS 35.0%
TCAATTTCAGCAAGAAACAG+TGG + chr5_4:22543885-22543904 Msa0844220:CDS 35.0%
GCATATCCATCTTCACATTA+TGG + chr5_4:22543934-22543953 Msa0844220:CDS 35.0%
TATCCATCTTCACATTATGG+CGG + chr5_4:22543937-22543956 Msa0844220:CDS 35.0%
! AGATTAGCCATCTTAGAAGA+AGG - chr5_4:22544066-22544085 None:intergenic 35.0%
AGCTTCAATGACAATGGAAA+AGG - chr5_4:22544129-22544148 None:intergenic 35.0%
!!! ATCATCGCCTTTTAAAACCA+TGG + chr5_4:22544215-22544234 Msa0844220:CDS 35.0%
! AGGTGATTAGCCGAATTAAT+TGG + chr5_4:22544536-22544555 Msa0844220:three_prime_UTR 35.0%
! TGATTAGCCGAATTAATTGG+TGG + chr5_4:22544539-22544558 Msa0844220:three_prime_UTR 35.0%
!! CCGAATTAATTGGTGGTTTT+TGG + chr5_4:22544546-22544565 Msa0844220:three_prime_UTR 35.0%
!!! TGGTTTTTGGTGTACATGTT+TGG + chr5_4:22544559-22544578 Msa0844220:three_prime_UTR 35.0%
! TCTATTTTGTATGGCTGTTG+GGG + chr5_4:22544628-22544647 Msa0844220:three_prime_UTR 35.0%
!! GATCCTTGTTTCTATTTGTC+TGG + chr5_4:22544651-22544670 Msa0844220:three_prime_UTR 35.0%
!! TCCTTGTTTCTATTTGTCTG+GGG + chr5_4:22544653-22544672 Msa0844220:three_prime_UTR 35.0%
! TTGGTCTATTTCTTGCAACT+TGG + chr5_4:22544723-22544742 Msa0844220:three_prime_UTR 35.0%
ATTTGCGAGATTTGGGTGAT+AGG - chr5_4:22542451-22542470 None:intergenic 40.0%
! GAGAGATGATTTGCGAGATT+TGG - chr5_4:22542459-22542478 None:intergenic 40.0%
GTGAAAAAAAGAGAGAAGGG+TGG - chr5_4:22542528-22542547 None:intergenic 40.0%
!!! ATTTTTGGTGTTCGACTCAC+CGG + chr5_4:22542737-22542756 Msa0844220:CDS 40.0%
GTGGTTGTTCATATTGAGAG+AGG - chr5_4:22542850-22542869 None:intergenic 40.0%
GATGTCATCGGATACATAAC+CGG - chr5_4:22542900-22542919 None:intergenic 40.0%
!! AACAGGTTGGTAAAGGTGAT+TGG + chr5_4:22543090-22543109 Msa0844220:CDS 40.0%
TATCAAAGAGACTGGATCTC+CGG - chr5_4:22543217-22543236 None:intergenic 40.0%
GGTGGTAATATCAAAGAGAC+TGG - chr5_4:22543225-22543244 None:intergenic 40.0%
ATACCGCCATAATGTGAAGA+TGG - chr5_4:22543943-22543962 None:intergenic 40.0%
ACTCTTTCAGCACTCATTAC+CGG - chr5_4:22544009-22544028 None:intergenic 40.0%
TTAGCCATCTTAGAAGAAGG+AGG - chr5_4:22544063-22544082 None:intergenic 40.0%
!!! CTTTTAAAACCATGGCTGCA+GGG + chr5_4:22544223-22544242 Msa0844220:CDS 40.0%
! CTATTTTGTATGGCTGTTGG+GGG + chr5_4:22544629-22544648 Msa0844220:three_prime_UTR 40.0%
!! CCTTGTTTCTATTTGTCTGG+GGG + chr5_4:22544654-22544673 Msa0844220:three_prime_UTR 40.0%
AGTGTGACCTTGAAGTGATA+GGG + chr5_4:22544677-22544696 Msa0844220:three_prime_UTR 40.0%
ATTTGCGAGATTTGGGTGAT+AGG - chr5_4:22542451-22542470 None:intergenic 40.0%
! GAGAGATGATTTGCGAGATT+TGG - chr5_4:22542459-22542478 None:intergenic 40.0%
GTGAAAAAAAGAGAGAAGGG+TGG - chr5_4:22542528-22542547 None:intergenic 40.0%
!!! ATTTTTGGTGTTCGACTCAC+CGG + chr5_4:22542737-22542756 Msa0844220:CDS 40.0%
GTGGTTGTTCATATTGAGAG+AGG - chr5_4:22542850-22542869 None:intergenic 40.0%
GATGTCATCGGATACATAAC+CGG - chr5_4:22542900-22542919 None:intergenic 40.0%
!! AACAGGTTGGTAAAGGTGAT+TGG + chr5_4:22543090-22543109 Msa0844220:CDS 40.0%
TATCAAAGAGACTGGATCTC+CGG - chr5_4:22543217-22543236 None:intergenic 40.0%
GGTGGTAATATCAAAGAGAC+TGG - chr5_4:22543225-22543244 None:intergenic 40.0%
ATACCGCCATAATGTGAAGA+TGG - chr5_4:22543943-22543962 None:intergenic 40.0%
ACTCTTTCAGCACTCATTAC+CGG - chr5_4:22544009-22544028 None:intergenic 40.0%
TTAGCCATCTTAGAAGAAGG+AGG - chr5_4:22544063-22544082 None:intergenic 40.0%
!!! CTTTTAAAACCATGGCTGCA+GGG + chr5_4:22544223-22544242 Msa0844220:CDS 40.0%
! CTATTTTGTATGGCTGTTGG+GGG + chr5_4:22544629-22544648 Msa0844220:three_prime_UTR 40.0%
!! CCTTGTTTCTATTTGTCTGG+GGG + chr5_4:22544654-22544673 Msa0844220:three_prime_UTR 40.0%
AGTGTGACCTTGAAGTGATA+GGG + chr5_4:22544677-22544696 Msa0844220:three_prime_UTR 40.0%
AACTCGAGAACATGCAACGA+CGG + chr5_4:22542692-22542711 Msa0844220:CDS 45.0%
!! GTTGATGGTGTTGTTGGTTG+TGG - chr5_4:22542795-22542814 None:intergenic 45.0%
!! AGGGTTGTTGATGGTGTTGT+TGG - chr5_4:22542801-22542820 None:intergenic 45.0%
TTGTGTTCTTCCTCTGTCCA+AGG - chr5_4:22543050-22543069 None:intergenic 45.0%
! GTTGGTAAAGGTGATTGGAG+AGG + chr5_4:22543095-22543114 Msa0844220:CDS 45.0%
GAAAACTAGGACACCAACTC+AGG + chr5_4:22543136-22543155 Msa0844220:CDS 45.0%
ATGTGAAGATGGATATGCGG+CGG - chr5_4:22543932-22543951 None:intergenic 45.0%
CTCATTACCGGCAATGTTAC+CGG - chr5_4:22543997-22544016 None:intergenic 45.0%
!! GGTAATGAGTGCTGAAAGAG+TGG + chr5_4:22544008-22544027 Msa0844220:CDS 45.0%
AAAGAGTGGCCAAGCCAATT+AGG + chr5_4:22544022-22544041 Msa0844220:CDS 45.0%
!! AGCATTGGTGTTGGCCTAAT+TGG - chr5_4:22544039-22544058 None:intergenic 45.0%
TTAGAAGAAGGAGGCAGCAT+TGG - chr5_4:22544054-22544073 None:intergenic 45.0%
TGACAATGGAAAAGGCTCGA+TGG - chr5_4:22544121-22544140 None:intergenic 45.0%
GGTTGCAGCTTCAATGACAA+TGG - chr5_4:22544135-22544154 None:intergenic 45.0%
GTCATTGAAGCTGCAACCTT+CGG + chr5_4:22544137-22544156 Msa0844220:CDS 45.0%
TCCATCGGAAGATCATTCAC+CGG + chr5_4:22544161-22544180 Msa0844220:CDS 45.0%
!!! CCTGCAGCCATGGTTTTAAA+AGG - chr5_4:22544225-22544244 None:intergenic 45.0%
!!! CCTTTTAAAACCATGGCTGC+AGG + chr5_4:22544222-22544241 Msa0844220:CDS 45.0%
ATTATACTTCCCTGCAGCCA+TGG - chr5_4:22544235-22544254 None:intergenic 45.0%
! ATGGCTGCAGGGAAGTATAA+TGG + chr5_4:22544234-22544253 Msa0844220:CDS 45.0%
! CTGCAGGGAAGTATAATGGT+GGG + chr5_4:22544238-22544257 Msa0844220:CDS 45.0%
! TGCAGGGAAGTATAATGGTG+GGG + chr5_4:22544239-22544258 Msa0844220:CDS 45.0%
TATAAGTAGGAGGACTAGGG+AGG + chr5_4:22544415-22544434 Msa0844220:three_prime_UTR 45.0%
ATAAGTAGGAGGACTAGGGA+GGG + chr5_4:22544416-22544435 Msa0844220:three_prime_UTR 45.0%
CCCCCAGACAAATAGAAACA+AGG - chr5_4:22544657-22544676 None:intergenic 45.0%
GAGTGTGACCTTGAAGTGAT+AGG + chr5_4:22544676-22544695 Msa0844220:three_prime_UTR 45.0%
ACCTTGAAGTGATAGGGCAA+TGG + chr5_4:22544683-22544702 Msa0844220:three_prime_UTR 45.0%
CCTTGAAGTGATAGGGCAAT+GGG + chr5_4:22544684-22544703 Msa0844220:three_prime_UTR 45.0%
GGGTACTCTTGGTCTCTTAT+TGG + chr5_4:22544704-22544723 Msa0844220:three_prime_UTR 45.0%
AACTCGAGAACATGCAACGA+CGG + chr5_4:22542692-22542711 Msa0844220:CDS 45.0%
!! GTTGATGGTGTTGTTGGTTG+TGG - chr5_4:22542795-22542814 None:intergenic 45.0%
!! AGGGTTGTTGATGGTGTTGT+TGG - chr5_4:22542801-22542820 None:intergenic 45.0%
TTGTGTTCTTCCTCTGTCCA+AGG - chr5_4:22543050-22543069 None:intergenic 45.0%
! GTTGGTAAAGGTGATTGGAG+AGG + chr5_4:22543095-22543114 Msa0844220:CDS 45.0%
GAAAACTAGGACACCAACTC+AGG + chr5_4:22543136-22543155 Msa0844220:CDS 45.0%
ATGTGAAGATGGATATGCGG+CGG - chr5_4:22543932-22543951 None:intergenic 45.0%
CTCATTACCGGCAATGTTAC+CGG - chr5_4:22543997-22544016 None:intergenic 45.0%
!! GGTAATGAGTGCTGAAAGAG+TGG + chr5_4:22544008-22544027 Msa0844220:CDS 45.0%
AAAGAGTGGCCAAGCCAATT+AGG + chr5_4:22544022-22544041 Msa0844220:CDS 45.0%
!! AGCATTGGTGTTGGCCTAAT+TGG - chr5_4:22544039-22544058 None:intergenic 45.0%
TTAGAAGAAGGAGGCAGCAT+TGG - chr5_4:22544054-22544073 None:intergenic 45.0%
TGACAATGGAAAAGGCTCGA+TGG - chr5_4:22544121-22544140 None:intergenic 45.0%
GGTTGCAGCTTCAATGACAA+TGG - chr5_4:22544135-22544154 None:intergenic 45.0%
GTCATTGAAGCTGCAACCTT+CGG + chr5_4:22544137-22544156 Msa0844220:CDS 45.0%
TCCATCGGAAGATCATTCAC+CGG + chr5_4:22544161-22544180 Msa0844220:CDS 45.0%
!!! CCTGCAGCCATGGTTTTAAA+AGG - chr5_4:22544225-22544244 None:intergenic 45.0%
!!! CCTTTTAAAACCATGGCTGC+AGG + chr5_4:22544222-22544241 Msa0844220:CDS 45.0%
ATTATACTTCCCTGCAGCCA+TGG - chr5_4:22544235-22544254 None:intergenic 45.0%
! ATGGCTGCAGGGAAGTATAA+TGG + chr5_4:22544234-22544253 Msa0844220:CDS 45.0%
! CTGCAGGGAAGTATAATGGT+GGG + chr5_4:22544238-22544257 Msa0844220:CDS 45.0%
! TGCAGGGAAGTATAATGGTG+GGG + chr5_4:22544239-22544258 Msa0844220:CDS 45.0%
TATAAGTAGGAGGACTAGGG+AGG + chr5_4:22544415-22544434 Msa0844220:three_prime_UTR 45.0%
ATAAGTAGGAGGACTAGGGA+GGG + chr5_4:22544416-22544435 Msa0844220:three_prime_UTR 45.0%
CCCCCAGACAAATAGAAACA+AGG - chr5_4:22544657-22544676 None:intergenic 45.0%
GAGTGTGACCTTGAAGTGAT+AGG + chr5_4:22544676-22544695 Msa0844220:three_prime_UTR 45.0%
ACCTTGAAGTGATAGGGCAA+TGG + chr5_4:22544683-22544702 Msa0844220:three_prime_UTR 45.0%
CCTTGAAGTGATAGGGCAAT+GGG + chr5_4:22544684-22544703 Msa0844220:three_prime_UTR 45.0%
GGGTACTCTTGGTCTCTTAT+TGG + chr5_4:22544704-22544723 Msa0844220:three_prime_UTR 45.0%
! CGTTGCATGTTCTCGAGTTG+TGG - chr5_4:22542691-22542710 None:intergenic 50.0%
!! GATGGTGTTGTTGGTTGTGG+TGG - chr5_4:22542792-22542811 None:intergenic 50.0%
! AGAGGCGTGAACGATGTCAT+CGG - chr5_4:22542912-22542931 None:intergenic 50.0%
!! TGGTTGGTGAAGGTGTTCCT+TGG + chr5_4:22543030-22543049 Msa0844220:intron 50.0%
!! TGAAGGTGTTCCTTGGACAG+AGG + chr5_4:22543037-22543056 Msa0844220:intron 50.0%
GTTCTTGTTGGGCTTGCAAC+AGG + chr5_4:22543073-22543092 Msa0844220:CDS 50.0%
TTGTTGGGCTTGCAACAGGT+TGG + chr5_4:22543077-22543096 Msa0844220:CDS 50.0%
!! GGCTTGCAACAGGTTGGTAA+AGG + chr5_4:22543083-22543102 Msa0844220:CDS 50.0%
! GCATGACTTGCAACCTGAGT+TGG - chr5_4:22543152-22543171 None:intergenic 50.0%
TGTGAAGATGGATATGCGGC+GGG - chr5_4:22543931-22543950 None:intergenic 50.0%
TCACATTATGGCGGTATCCC+CGG + chr5_4:22543946-22543965 Msa0844220:CDS 50.0%
! ACACCTTTTCCGATGGGTCT+TGG + chr5_4:22543970-22543989 Msa0844220:CDS 50.0%
! TTTTCCGATGGGTCTTGGTC+CGG + chr5_4:22543975-22543994 Msa0844220:CDS 50.0%
TCTTGGTCCGGTAACATTGC+CGG + chr5_4:22543987-22544006 Msa0844220:CDS 50.0%
!! TGGTGTTGGCCTAATTGGCT+TGG - chr5_4:22544034-22544053 None:intergenic 50.0%
! GCTGCCTCCTTCTTCTAAGA+TGG + chr5_4:22544056-22544075 Msa0844220:CDS 50.0%
TGATCTTCCGATGGAACCGA+AGG - chr5_4:22544156-22544175 None:intergenic 50.0%
TCCGGTGAATGATCTTCCGA+TGG - chr5_4:22544165-22544184 None:intergenic 50.0%
!! GACGAATGGCTGCTACTTTC+CGG - chr5_4:22544183-22544202 None:intergenic 50.0%
TAGCAGCCATTCGTCGTCAT+CGG + chr5_4:22544188-22544207 Msa0844220:CDS 50.0%
ATGAAGCCGATGACGACGAA+TGG - chr5_4:22544197-22544216 None:intergenic 50.0%
! GCTGCAGGGAAGTATAATGG+TGG + chr5_4:22544237-22544256 Msa0844220:CDS 50.0%
! GCAGGGAAGTATAATGGTGG+GGG + chr5_4:22544240-22544259 Msa0844220:CDS 50.0%
! GGAAGTATAATGGTGGGGGT+GGG + chr5_4:22544244-22544263 Msa0844220:CDS 50.0%
! GAAGTATAATGGTGGGGGTG+GGG + chr5_4:22544245-22544264 Msa0844220:CDS 50.0%
CCCATTGCCCTATCACTTCA+AGG - chr5_4:22544687-22544706 None:intergenic 50.0%
GATAGGGCAATGGGTACTCT+TGG + chr5_4:22544693-22544712 Msa0844220:three_prime_UTR 50.0%
! CGTTGCATGTTCTCGAGTTG+TGG - chr5_4:22542691-22542710 None:intergenic 50.0%
!! GATGGTGTTGTTGGTTGTGG+TGG - chr5_4:22542792-22542811 None:intergenic 50.0%
! AGAGGCGTGAACGATGTCAT+CGG - chr5_4:22542912-22542931 None:intergenic 50.0%
!! TGGTTGGTGAAGGTGTTCCT+TGG + chr5_4:22543030-22543049 Msa0844220:intron 50.0%
!! TGAAGGTGTTCCTTGGACAG+AGG + chr5_4:22543037-22543056 Msa0844220:intron 50.0%
GTTCTTGTTGGGCTTGCAAC+AGG + chr5_4:22543073-22543092 Msa0844220:CDS 50.0%
TTGTTGGGCTTGCAACAGGT+TGG + chr5_4:22543077-22543096 Msa0844220:CDS 50.0%
!! GGCTTGCAACAGGTTGGTAA+AGG + chr5_4:22543083-22543102 Msa0844220:CDS 50.0%
! GCATGACTTGCAACCTGAGT+TGG - chr5_4:22543152-22543171 None:intergenic 50.0%
TGTGAAGATGGATATGCGGC+GGG - chr5_4:22543931-22543950 None:intergenic 50.0%
TCACATTATGGCGGTATCCC+CGG + chr5_4:22543946-22543965 Msa0844220:CDS 50.0%
! ACACCTTTTCCGATGGGTCT+TGG + chr5_4:22543970-22543989 Msa0844220:CDS 50.0%
! TTTTCCGATGGGTCTTGGTC+CGG + chr5_4:22543975-22543994 Msa0844220:CDS 50.0%
TCTTGGTCCGGTAACATTGC+CGG + chr5_4:22543987-22544006 Msa0844220:CDS 50.0%
!! TGGTGTTGGCCTAATTGGCT+TGG - chr5_4:22544034-22544053 None:intergenic 50.0%
! GCTGCCTCCTTCTTCTAAGA+TGG + chr5_4:22544056-22544075 Msa0844220:CDS 50.0%
TGATCTTCCGATGGAACCGA+AGG - chr5_4:22544156-22544175 None:intergenic 50.0%
TCCGGTGAATGATCTTCCGA+TGG - chr5_4:22544165-22544184 None:intergenic 50.0%
!! GACGAATGGCTGCTACTTTC+CGG - chr5_4:22544183-22544202 None:intergenic 50.0%
TAGCAGCCATTCGTCGTCAT+CGG + chr5_4:22544188-22544207 Msa0844220:CDS 50.0%
ATGAAGCCGATGACGACGAA+TGG - chr5_4:22544197-22544216 None:intergenic 50.0%
! GCTGCAGGGAAGTATAATGG+TGG + chr5_4:22544237-22544256 Msa0844220:CDS 50.0%
! GCAGGGAAGTATAATGGTGG+GGG + chr5_4:22544240-22544259 Msa0844220:CDS 50.0%
! GGAAGTATAATGGTGGGGGT+GGG + chr5_4:22544244-22544263 Msa0844220:CDS 50.0%
! GAAGTATAATGGTGGGGGTG+GGG + chr5_4:22544245-22544264 Msa0844220:CDS 50.0%
CCCATTGCCCTATCACTTCA+AGG - chr5_4:22544687-22544706 None:intergenic 50.0%
GATAGGGCAATGGGTACTCT+TGG + chr5_4:22544693-22544712 Msa0844220:three_prime_UTR 50.0%
TGCTCACAGTGCGGCAACAA+CGG + chr5_4:22542665-22542684 Msa0844220:CDS 55.0%
TCGAGAACATGCAACGACGG+TGG + chr5_4:22542695-22542714 Msa0844220:CDS 55.0%
!! TTTGGTGTTCGACTCACCGG+AGG + chr5_4:22542740-22542759 Msa0844220:CDS 55.0%
! GTTGGGGTGGTTGTTTCCTC+CGG - chr5_4:22542759-22542778 None:intergenic 55.0%
!! GTTGTTGGTTGTGGTGGTGG+TGG - chr5_4:22542786-22542805 None:intergenic 55.0%
!! GGTGTTGTTGGTTGTGGTGG+TGG - chr5_4:22542789-22542808 None:intergenic 55.0%
GGGTTGGAATCTTGTGGAGG+TGG - chr5_4:22542869-22542888 None:intergenic 55.0%
TCCACAAGATTCCAACCCCG+CGG + chr5_4:22542871-22542890 Msa0844220:CDS 55.0%
ATACATAACCGGCATCCGCG+GGG - chr5_4:22542889-22542908 None:intergenic 55.0%
GATACATAACCGGCATCCGC+GGG - chr5_4:22542890-22542909 None:intergenic 55.0%
GGATACATAACCGGCATCCG+CGG - chr5_4:22542891-22542910 None:intergenic 55.0%
GATGACATCGTTCACGCCTC+TGG + chr5_4:22542911-22542930 Msa0844220:CDS 55.0%
CGATCCAGAGAACGCAAACG+AGG + chr5_4:22542935-22542954 Msa0844220:CDS 55.0%
CTGACCTCGTTTGCGTTCTC+TGG - chr5_4:22542942-22542961 None:intergenic 55.0%
CAAAGAGACTGGATCTCCGG+CGG - chr5_4:22543214-22543233 None:intergenic 55.0%
TGAAGATGGATATGCGGCGG+GGG - chr5_4:22543929-22543948 None:intergenic 55.0%
GTGAAGATGGATATGCGGCG+GGG - chr5_4:22543930-22543949 None:intergenic 55.0%
CACATTATGGCGGTATCCCC+GGG + chr5_4:22543947-22543966 Msa0844220:CDS 55.0%
!! ACCCATCGGAAAAGGTGTCC+CGG - chr5_4:22543968-22543987 None:intergenic 55.0%
GGACCAAGACCCATCGGAAA+AGG - chr5_4:22543976-22543995 None:intergenic 55.0%
GTTACCGGACCAAGACCCAT+CGG - chr5_4:22543982-22544001 None:intergenic 55.0%
!! GAAGGAGGCAGCATTGGTGT+TGG - chr5_4:22544048-22544067 None:intergenic 55.0%
GCTGCAACCTTCGGTTCCAT+CGG + chr5_4:22544146-22544165 Msa0844220:CDS 55.0%
! GGGAAGTATAATGGTGGGGG+TGG + chr5_4:22544243-22544262 Msa0844220:CDS 55.0%
TGCTCACAGTGCGGCAACAA+CGG + chr5_4:22542665-22542684 Msa0844220:CDS 55.0%
TCGAGAACATGCAACGACGG+TGG + chr5_4:22542695-22542714 Msa0844220:CDS 55.0%
!! TTTGGTGTTCGACTCACCGG+AGG + chr5_4:22542740-22542759 Msa0844220:CDS 55.0%
! GTTGGGGTGGTTGTTTCCTC+CGG - chr5_4:22542759-22542778 None:intergenic 55.0%
!! GTTGTTGGTTGTGGTGGTGG+TGG - chr5_4:22542786-22542805 None:intergenic 55.0%
!! GGTGTTGTTGGTTGTGGTGG+TGG - chr5_4:22542789-22542808 None:intergenic 55.0%
GGGTTGGAATCTTGTGGAGG+TGG - chr5_4:22542869-22542888 None:intergenic 55.0%
TCCACAAGATTCCAACCCCG+CGG + chr5_4:22542871-22542890 Msa0844220:CDS 55.0%
ATACATAACCGGCATCCGCG+GGG - chr5_4:22542889-22542908 None:intergenic 55.0%
GATACATAACCGGCATCCGC+GGG - chr5_4:22542890-22542909 None:intergenic 55.0%
GGATACATAACCGGCATCCG+CGG - chr5_4:22542891-22542910 None:intergenic 55.0%
GATGACATCGTTCACGCCTC+TGG + chr5_4:22542911-22542930 Msa0844220:CDS 55.0%
CGATCCAGAGAACGCAAACG+AGG + chr5_4:22542935-22542954 Msa0844220:CDS 55.0%
CTGACCTCGTTTGCGTTCTC+TGG - chr5_4:22542942-22542961 None:intergenic 55.0%
CAAAGAGACTGGATCTCCGG+CGG - chr5_4:22543214-22543233 None:intergenic 55.0%
TGAAGATGGATATGCGGCGG+GGG - chr5_4:22543929-22543948 None:intergenic 55.0%
GTGAAGATGGATATGCGGCG+GGG - chr5_4:22543930-22543949 None:intergenic 55.0%
CACATTATGGCGGTATCCCC+GGG + chr5_4:22543947-22543966 Msa0844220:CDS 55.0%
!! ACCCATCGGAAAAGGTGTCC+CGG - chr5_4:22543968-22543987 None:intergenic 55.0%
GGACCAAGACCCATCGGAAA+AGG - chr5_4:22543976-22543995 None:intergenic 55.0%
GTTACCGGACCAAGACCCAT+CGG - chr5_4:22543982-22544001 None:intergenic 55.0%
!! GAAGGAGGCAGCATTGGTGT+TGG - chr5_4:22544048-22544067 None:intergenic 55.0%
GCTGCAACCTTCGGTTCCAT+CGG + chr5_4:22544146-22544165 Msa0844220:CDS 55.0%
! GGGAAGTATAATGGTGGGGG+TGG + chr5_4:22544243-22544262 Msa0844220:CDS 55.0%
TCTCGCACGTGCTCACAGTG+CGG + chr5_4:22542656-22542675 Msa0844220:CDS 60.0%
!! TGGTGGTGGTGGTGGTGTTG+GGG - chr5_4:22542775-22542794 None:intergenic 60.0%
!! GTGGTGGTGGTGGTGGTGTT+GGG - chr5_4:22542776-22542795 None:intergenic 60.0%
!! TGTGGTGGTGGTGGTGGTGT+TGG - chr5_4:22542777-22542796 None:intergenic 60.0%
!! GTTGGTTGTGGTGGTGGTGG+TGG - chr5_4:22542783-22542802 None:intergenic 60.0%
GCGGGGTTGGAATCTTGTGG+AGG - chr5_4:22542872-22542891 None:intergenic 60.0%
TCCGCGGGGTTGGAATCTTG+TGG - chr5_4:22542875-22542894 None:intergenic 60.0%
GCGTTCTCTGGATCGACCAG+AGG - chr5_4:22542930-22542949 None:intergenic 60.0%
! GGTTCTGGTTATGACGGCGG+AGG - chr5_4:22543187-22543206 None:intergenic 60.0%
! GGCGGTTCTGGTTATGACGG+CGG - chr5_4:22543190-22543209 None:intergenic 60.0%
! GGCGGCGGTTCTGGTTATGA+CGG - chr5_4:22543193-22543212 None:intergenic 60.0%
!! CCATCGGAAAAGGTGTCCCG+GGG - chr5_4:22543966-22543985 None:intergenic 60.0%
!! CCCATCGGAAAAGGTGTCCC+GGG - chr5_4:22543967-22543986 None:intergenic 60.0%
! CCCGGGACACCTTTTCCGAT+GGG + chr5_4:22543964-22543983 Msa0844220:CDS 60.0%
GGACTAGGGAGGGACTAGAG+AGG + chr5_4:22544426-22544445 Msa0844220:three_prime_UTR 60.0%
TCTCGCACGTGCTCACAGTG+CGG + chr5_4:22542656-22542675 Msa0844220:CDS 60.0%
!! TGGTGGTGGTGGTGGTGTTG+GGG - chr5_4:22542775-22542794 None:intergenic 60.0%
!! GTGGTGGTGGTGGTGGTGTT+GGG - chr5_4:22542776-22542795 None:intergenic 60.0%
!! TGTGGTGGTGGTGGTGGTGT+TGG - chr5_4:22542777-22542796 None:intergenic 60.0%
!! GTTGGTTGTGGTGGTGGTGG+TGG - chr5_4:22542783-22542802 None:intergenic 60.0%
GCGGGGTTGGAATCTTGTGG+AGG - chr5_4:22542872-22542891 None:intergenic 60.0%
TCCGCGGGGTTGGAATCTTG+TGG - chr5_4:22542875-22542894 None:intergenic 60.0%
GCGTTCTCTGGATCGACCAG+AGG - chr5_4:22542930-22542949 None:intergenic 60.0%
! GGTTCTGGTTATGACGGCGG+AGG - chr5_4:22543187-22543206 None:intergenic 60.0%
! GGCGGTTCTGGTTATGACGG+CGG - chr5_4:22543190-22543209 None:intergenic 60.0%
! GGCGGCGGTTCTGGTTATGA+CGG - chr5_4:22543193-22543212 None:intergenic 60.0%
!! CCATCGGAAAAGGTGTCCCG+GGG - chr5_4:22543966-22543985 None:intergenic 60.0%
!! CCCATCGGAAAAGGTGTCCC+GGG - chr5_4:22543967-22543986 None:intergenic 60.0%
! CCCGGGACACCTTTTCCGAT+GGG + chr5_4:22543964-22543983 Msa0844220:CDS 60.0%
GGACTAGGGAGGGACTAGAG+AGG + chr5_4:22544426-22544445 Msa0844220:three_prime_UTR 60.0%
!! TGGTGGTGGTGGTGTTGGGG+TGG - chr5_4:22542772-22542791 None:intergenic 65.0%
GATTCCAACCCCGCGGATGC+CGG + chr5_4:22542878-22542897 Msa0844220:CDS 65.0%
ATAACCGGCATCCGCGGGGT+TGG - chr5_4:22542885-22542904 None:intergenic 65.0%
ATAACCAGAACCGCCGCCGC+CGG + chr5_4:22543195-22543214 Msa0844220:CDS 65.0%
AGAGACTGGATCTCCGGCGG+CGG - chr5_4:22543211-22543230 None:intergenic 65.0%
GATGGATATGCGGCGGGGGT+TGG - chr5_4:22543925-22543944 None:intergenic 65.0%
! CCCCGGGACACCTTTTCCGA+TGG + chr5_4:22543963-22543982 Msa0844220:CDS 65.0%
!! TGGTGGTGGTGGTGTTGGGG+TGG - chr5_4:22542772-22542791 None:intergenic 65.0%
GATTCCAACCCCGCGGATGC+CGG + chr5_4:22542878-22542897 Msa0844220:CDS 65.0%
ATAACCGGCATCCGCGGGGT+TGG - chr5_4:22542885-22542904 None:intergenic 65.0%
ATAACCAGAACCGCCGCCGC+CGG + chr5_4:22543195-22543214 Msa0844220:CDS 65.0%
AGAGACTGGATCTCCGGCGG+CGG - chr5_4:22543211-22543230 None:intergenic 65.0%
GATGGATATGCGGCGGGGGT+TGG - chr5_4:22543925-22543944 None:intergenic 65.0%
! CCCCGGGACACCTTTTCCGA+TGG + chr5_4:22543963-22543982 Msa0844220:CDS 65.0%
!! TATGCGGCGGGGGTTGGTGG+TGG - chr5_4:22543919-22543938 None:intergenic 70.0%
GGATATGCGGCGGGGGTTGG+TGG - chr5_4:22543922-22543941 None:intergenic 70.0%
!! TATGCGGCGGGGGTTGGTGG+TGG - chr5_4:22543919-22543938 None:intergenic 70.0%
GGATATGCGGCGGGGGTTGG+TGG - chr5_4:22543922-22543941 None:intergenic 70.0%
ATCTCCGGCGGCGGCGGTTC+TGG - chr5_4:22543202-22543221 None:intergenic 75.0%
GACTGGATCTCCGGCGGCGG+CGG - chr5_4:22543208-22543227 None:intergenic 75.0%
!! GCGGGGGTTGGTGGTGGCAG+TGG - chr5_4:22543913-22543932 None:intergenic 75.0%
ATCTCCGGCGGCGGCGGTTC+TGG - chr5_4:22543202-22543221 None:intergenic 75.0%
GACTGGATCTCCGGCGGCGG+CGG - chr5_4:22543208-22543227 None:intergenic 75.0%
!! GCGGGGGTTGGTGGTGGCAG+TGG - chr5_4:22543913-22543932 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 22542446 22544796 22542446 ID=Msa0844220;Name=Msa0844220
chr5_4 mRNA 22542446 22544796 22542446 ID=Msa0844220-mRNA-1;Parent=Msa0844220;Name=Msa0844220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=201|1|1|1|1|1|3|506|318
chr5_4 exon 22542446 22542956 22542446 ID=Msa0844220-mRNA-1:exon:9203;Parent=Msa0844220-mRNA-1
chr5_4 exon 22543042 22543250 22543042 ID=Msa0844220-mRNA-1:exon:9204;Parent=Msa0844220-mRNA-1
chr5_4 exon 22543853 22544796 22543853 ID=Msa0844220-mRNA-1:exon:9205;Parent=Msa0844220-mRNA-1
chr5_4 five_prime_UTR 22542446 22542646 22542446 ID=Msa0844220-mRNA-1:five_prime_utr;Parent=Msa0844220-mRNA-1
chr5_4 CDS 22542647 22542956 22542647 ID=Msa0844220-mRNA-1:cds;Parent=Msa0844220-mRNA-1
chr5_4 CDS 22543042 22543250 22543042 ID=Msa0844220-mRNA-1:cds;Parent=Msa0844220-mRNA-1
chr5_4 CDS 22543853 22544290 22543853 ID=Msa0844220-mRNA-1:cds;Parent=Msa0844220-mRNA-1
chr5_4 three_prime_UTR 22544291 22544796 22544291 ID=Msa0844220-mRNA-1:three_prime_utr;Parent=Msa0844220-mRNA-1
Gene Sequence

>Msa0844220

ATGTCTTTGTCTCGCACGTGCTCACAGTGCGGCAACAACGGCCACAACTCGAGAACATGCAACGACGGTGGAGAAGAAAAAAGCATCATGATTTTTGGTGTTCGACTCACCGGAGGAAACAACCACCCCAACACCACCACCACCACCACAACCAACAACACCATCAACAACCCTTTCAGAAAAAGTGCTAGCATGACCAACCTCTCTCAATATGAACAACCACCTCCACAAGATTCCAACCCCGCGGATGCCGGTTATGTATCCGATGACATCGTTCACGCCTCTGGTCGATCCAGAGAACGCAAACGAGGTGTTCCTTGGACAGAGGAAGAACACAAGTTGTTCTTGTTGGGCTTGCAACAGGTTGGTAAAGGTGATTGGAGAGGAATTTCTAGAAACTTTGTGAAAACTAGGACACCAACTCAGGTTGCAAGTCATGCTCAGAAGTATTTCCTCCGCCGTCATAACCAGAACCGCCGCCGCCGGAGATCCAGTCTCTTTGATATTACCACCGATACGGTGATGGAACCTTCAACTATAATGGAAGATGATCAATTTCAGCAAGAAACAGTGGCGCCACTGCCACCACCAACCCCCGCCGCATATCCATCTTCACATTATGGCGGTATCCCCGGGACACCTTTTCCGATGGGTCTTGGTCCGGTAACATTGCCGGTAATGAGTGCTGAAAGAGTGGCCAAGCCAATTAGGCCAACACCAATGCTGCCTCCTTCTTCTAAGATGGCTAATCTGAACTTGAAAGACAAAGCTGCTTCTTCTTCTTCCATCGAGCCTTTTCCATTGTCATTGAAGCTGCAACCTTCGGTTCCATCGGAAGATCATTCACCGGAAAGTAGCAGCCATTCGTCGTCATCGGCTTCATCATCGCCTTTTAAAACCATGGCTGCAGGGAAGTATAATGGTGGGGGTGGGGATAGCATTATCAGTGTTGCTTGA
Protein sequence

>Msa0844220

MSLSRTCSQCGNNGHNSRTCNDGGEEKSIMIFGVRLTGGNNHPNTTTTTTTNNTINNPFRKSASMTNLSQYEQPPPQDSNPADAGYVSDDIVHASGRSRERKRGVPWTEEEHKLFLLGLQQVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMEPSTIMEDDQFQQETVAPLPPPTPAAYPSSHYGGIPGTPFPMGLGPVTLPVMSAERVAKPIRPTPMLPPSSKMANLNLKDKAASSSSIEPFPLSLKLQPSVPSEDHSPESSSHSSSSASSSPFKTMAAGKYNGGGGDSIISVA*