AlfalfaGEDB | Msa0799680

M. sativa cultivar zhongmu-4 / Msa0799680

KEGG: -
GO: -
PFAM: PF00643.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799680	XP_013453547.1	90.526	190	0	1	1	172	1	190	2.79e-119	345

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799680	sp\|C0SVM5\|BBX19_ARATH	57.831	166	58	4	1	165	1	155	3.85e-57	180

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799680	A0A072UCQ4	90.526	190	0	1	1	172	1	190	1.33e-119	345

TFs/TRs:

Gene ID	Type	Classification
Msa0799680	TF	DBB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003640	Msa0799680	-0.835443	1.672734e-56	-8.615850e-47
Msa0015930	Msa0799680	-0.855718	5.227805e-62	-8.615850e-47
Msa0026680	Msa0799680	-0.806019	1.008041e-49	-8.615850e-47
Msa0032090	Msa0799680	-0.803472	3.429657e-49	-8.615850e-47
Msa0032580	Msa0799680	-0.821115	4.793930e-53	-8.615850e-47
Msa0033110	Msa0799680	-0.807238	5.574043e-50	-8.615850e-47
Msa0033260	Msa0799680	-0.817686	2.899270e-52	-8.615850e-47
Msa0034410	Msa0799680	-0.807744	4.352555e-50	-8.615850e-47
Msa0052640	Msa0799680	-0.800900	1.160074e-48	-8.615850e-47
Msa0052770	Msa0799680	-0.807770	4.297377e-50	-8.615850e-47
Msa0055180	Msa0799680	-0.808769	2.631717e-50	-8.615850e-47
Msa0058300	Msa0799680	-0.851818	6.928709e-61	-8.615850e-47
Msa0075960	Msa0799680	-0.831124	1.993520e-55	-8.615850e-47
Msa0091410	Msa0799680	-0.813047	3.118229e-51	-8.615850e-47
Msa0604010	Msa0799680	-0.805528	1.278412e-49	-8.615850e-47
Msa0605630	Msa0799680	-0.815762	7.831037e-52	-8.615850e-47
Msa0605650	Msa0799680	-0.870713	1.185618e-66	-8.615850e-47
Msa0609660	Msa0799680	0.830594	2.689305e-55	-8.615850e-47
Msa0623790	Msa0799680	-0.801075	1.068442e-48	-8.615850e-47
Msa0643560	Msa0799680	-0.807678	4.494730e-50	-8.615850e-47
Msa0646580	Msa0799680	-0.824807	6.607485e-54	-8.615850e-47
Msa0650500	Msa0799680	0.855817	4.889294e-62	-8.615850e-47
Msa0666560	Msa0799680	0.807049	6.111856e-50	-8.615850e-47
Msa0686210	Msa0799680	-0.817229	3.675073e-52	-8.615850e-47
Msa0692240	Msa0799680	0.856004	4.312625e-62	-8.615850e-47
Msa0692950	Msa0799680	-0.809005	2.342740e-50	-8.615850e-47
Msa0717230	Msa0799680	0.984992	3.345383e-162	-8.615850e-47
Msa0727550	Msa0799680	-0.802098	6.591898e-49	-8.615850e-47
Msa0734740	Msa0799680	-0.803252	3.809350e-49	-8.615850e-47
Msa0737600	Msa0799680	-0.814709	1.342102e-51	-8.615850e-47
Msa0745470	Msa0799680	-0.810701	1.011350e-50	-8.615850e-47
Msa0758300	Msa0799680	0.803076	4.141859e-49	-8.615850e-47
Msa0764680	Msa0799680	0.814496	1.495895e-51	-8.615850e-47
Msa0765080	Msa0799680	-0.808974	2.378624e-50	-8.615850e-47
Msa0799680	Msa0817730	-0.813452	2.541523e-51	-8.615850e-47
Msa0799680	Msa0858180	-0.818395	2.004220e-52	-8.615850e-47
Msa0799680	Msa0867730	-0.849739	2.664619e-60	-8.615850e-47
Msa0799680	Msa0927260	-0.819576	1.080416e-52	-8.615850e-47
Msa0799680	Msa0968610	-0.828880	7.028027e-55	-8.615850e-47
Msa0799680	Msa0982130	-0.818015	2.443488e-52	-8.615850e-47
Msa0799680	Msa1029050	-0.827301	1.687573e-54	-8.615850e-47
Msa0799680	Msa1030620	-0.835970	1.230700e-56	-8.615850e-47
Msa0799680	Msa1037420	-0.861322	1.112635e-63	-8.615850e-47
Msa0799680	Msa1051200	-0.809100	2.236001e-50	-8.615850e-47
Msa0799680	Msa1123810	-0.849246	3.658436e-60	-8.615850e-47
Msa0799680	Msa1162270	-0.811856	5.679010e-51	-8.615850e-47
Msa0799680	Msa1172610	0.859073	5.321792e-63	-8.615850e-47
Msa0799680	Msa1173140	-0.806530	7.867202e-50	-8.615850e-47
Msa0799680	Msa1231840	-0.833762	4.427225e-56	-8.615850e-47
Msa0799680	Msa1254730	-0.801196	1.009393e-48	-8.615850e-47
Msa0799680	Msa1274560	-0.808709	2.711194e-50	-8.615850e-47
Msa0799680	Msa1280340	-0.811464	6.910141e-51	-8.615850e-47
Msa0799680	Msa1312520	-0.803656	3.141815e-49	-8.615850e-47
Msa0799680	Msa1361520	-0.813618	2.336472e-51	-8.615850e-47
Msa0799680	Msa1384360	0.871484	6.599903e-67	-8.615850e-47
Msa0799680	Msa1385770	-0.859817	3.180170e-63	-8.615850e-47
Msa0799680	Msa1409240	-0.858738	6.703198e-63	-8.615850e-47
Msa0799680	Msa1434140	-0.855679	5.366692e-62	-8.615850e-47
Msa0138630	Msa0799680	-0.822840	1.909932e-53	-8.615850e-47
Msa0140630	Msa0799680	-0.834379	3.101395e-56	-8.615850e-47
Msa0145080	Msa0799680	-0.807984	3.868862e-50	-8.615850e-47
Msa0145440	Msa0799680	-0.806595	7.623564e-50	-8.615850e-47
Msa0145730	Msa0799680	-0.816966	4.210827e-52	-8.615850e-47
Msa0156370	Msa0799680	-0.858551	7.621829e-63	-8.615850e-47
Msa0159170	Msa0799680	-0.809585	1.759774e-50	-8.615850e-47
Msa0159340	Msa0799680	-0.824417	8.165702e-54	-8.615850e-47
Msa0162130	Msa0799680	-0.802281	6.043262e-49	-8.615850e-47
Msa0172970	Msa0799680	-0.819554	1.092932e-52	-8.615850e-47
Msa0175430	Msa0799680	-0.806842	6.758634e-50	-8.615850e-47
Msa0233630	Msa0799680	0.819951	8.870083e-53	-8.615850e-47
Msa0375310	Msa0799680	-0.810956	8.907177e-51	-8.615850e-47
Msa0381500	Msa0799680	-0.833900	4.087771e-56	-8.615850e-47
Msa0387820	Msa0799680	-0.815171	1.059887e-51	-8.615850e-47
Msa0402210	Msa0799680	-0.819430	1.166266e-52	-8.615850e-47
Msa0402790	Msa0799680	-0.810372	1.190864e-50	-8.615850e-47
Msa0421500	Msa0799680	-0.819749	9.861274e-53	-8.615850e-47
Msa0423450	Msa0799680	0.811020	8.627446e-51	-8.615850e-47
Msa0435980	Msa0799680	0.874427	6.811302e-68	-8.615850e-47
Msa0265430	Msa0799680	-0.823582	1.281860e-53	-8.615850e-47
Msa0340380	Msa0799680	-0.847379	1.200165e-59	-8.615850e-47
Msa0350880	Msa0799680	-0.810302	1.233333e-50	-8.615850e-47
Msa0355140	Msa0799680	-0.810553	1.088623e-50	-8.615850e-47
Msa0483770	Msa0799680	-0.806431	8.254511e-50	-8.615850e-47
Msa0492890	Msa0799680	-0.842152	3.078189e-58	-8.615850e-47
Msa0497210	Msa0799680	-0.807708	4.430159e-50	-8.615850e-47
Msa0513990	Msa0799680	-0.831402	1.703916e-55	-8.615850e-47
Msa0519950	Msa0799680	-0.842664	2.252836e-58	-8.615850e-47
Msa0527690	Msa0799680	0.868393	6.751106e-66	-8.615850e-47
Msa0550120	Msa0799680	-0.844680	6.507123e-59	-8.615850e-47
Msa0550150	Msa0799680	-0.838521	2.736925e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799680	MtrunA17_Chr5g0405151	90.217	184	0	1	1	166	1	184	3.43e-118	332
Msa0799680	MtrunA17_Chr2g0314671	55.294	85	37	1	1	84	1	85	2.41e-25	98.6
Msa0799680	MtrunA17_Chr2g0329511	49.462	93	46	1	1	92	1	93	2.68e-24	95.1
Msa0799680	MtrunA17_Chr4g0033641	48.387	93	47	1	1	92	1	93	2.27e-22	89.7
Msa0799680	MtrunA17_Chr3g0145061	44.186	86	46	1	1	84	1	86	9.36e-22	87.8
Msa0799680	MtrunA17_Chr3g0142221	47.126	87	43	1	1	84	1	87	4.25e-21	86.3
Msa0799680	MtrunA17_Chr3g0136701	51.852	81	31	1	4	84	5	77	1.73e-20	85.9
Msa0799680	MtrunA17_Chr4g0035651	44.186	86	46	1	1	84	1	86	2.52e-20	84.0
Msa0799680	MtrunA17_Chr1g0155811	47.674	86	43	1	1	84	1	86	1.37e-19	83.2
Msa0799680	MtrunA17_Chr1g0150471	46.914	81	35	1	4	84	5	77	9.44e-19	81.3
Msa0799680	MtrunA17_Chr7g0220721	48.750	80	33	1	5	84	26	97	4.83e-18	80.1
Msa0799680	MtrunA17_Chr4g0072871	43.210	81	38	1	4	84	21	93	2.18e-16	75.5
Msa0799680	MtrunA17_Chr7g0268691	38.750	80	41	1	5	84	20	91	2.04e-13	67.0
Msa0799680	MtrunA17_Chr5g0429341	36.559	93	49	2	1	93	1	83	3.42e-12	63.5
Msa0799680	MtrunA17_Chr3g0120711	38.095	84	44	1	1	84	1	76	5.91e-12	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0799680	AT4G38960.1	57.831	166	58	4	1	165	1	155	3.91e-58	180
Msa0799680	AT4G38960.6	57.831	166	58	4	1	165	1	155	3.91e-58	180
Msa0799680	AT2G21320.1	57.485	167	60	5	1	166	1	157	3.04e-54	170
Msa0799680	AT4G38960.3	46.667	210	55	6	1	165	1	198	5.42e-50	160
Msa0799680	AT4G38960.4	50.370	135	55	4	34	167	1	124	4.77e-36	123
Msa0799680	AT4G38960.5	50.376	133	54	4	34	165	1	122	6.37e-35	120
Msa0799680	AT4G38960.2	50.376	133	54	4	34	165	1	122	6.37e-35	120
Msa0799680	AT1G78600.1	55.294	85	37	1	1	84	1	85	1.03e-26	102
Msa0799680	AT1G78600.2	55.294	85	37	1	1	84	1	85	1.49e-26	102
Msa0799680	AT1G06040.2	48.387	93	47	1	1	92	1	93	3.53e-22	88.2
Msa0799680	AT1G06040.1	48.387	93	47	1	1	92	1	93	8.59e-22	89.0
Msa0799680	AT4G39070.1	47.674	86	43	1	1	84	1	86	1.10e-21	88.6
Msa0799680	AT1G75540.1	46.591	88	43	1	1	84	1	88	1.43e-21	89.7
Msa0799680	AT2G24790.1	50.617	81	32	1	4	84	7	79	1.74e-20	86.3
Msa0799680	AT2G31380.1	48.387	93	47	1	1	92	1	93	1.76e-20	85.1
Msa0799680	AT2G24790.2	50.617	81	32	1	4	84	7	79	2.56e-20	84.3
Msa0799680	AT5G15850.1	50.000	80	32	1	5	84	12	83	2.18e-19	84.0
Msa0799680	AT5G24930.1	48.148	81	34	1	4	84	5	77	2.19e-19	84.0
Msa0799680	AT3G02380.1	48.750	80	33	1	5	84	16	87	1.74e-18	81.3
Msa0799680	AT5G15840.1	50.000	80	32	1	5	84	20	91	5.47e-18	80.1
Msa0799680	AT5G15840.2	50.000	80	32	1	5	84	20	91	6.60e-18	79.0
Msa0799680	AT4G10240.1	43.956	91	44	1	1	84	1	91	1.85e-17	75.5
Msa0799680	AT2G47890.1	44.444	81	37	1	4	84	12	84	2.01e-16	75.5
Msa0799680	AT2G47890.3	44.444	81	37	1	4	84	12	84	2.39e-16	75.1
Msa0799680	AT2G47890.2	44.444	81	37	1	4	84	12	84	7.23e-16	72.8
Msa0799680	AT5G57660.1	42.500	80	34	2	5	84	22	89	8.87e-14	68.2
Msa0799680	AT1G28050.1	42.169	83	40	1	2	84	6	80	3.29e-13	67.0
Msa0799680	AT2G33500.1	40.000	80	40	1	5	84	12	83	1.21e-11	62.4
Msa0799680	AT2G33500.2	40.000	80	40	1	5	84	12	83	1.29e-11	62.4
Msa0799680	AT1G68190.1	37.931	87	46	1	1	87	10	88	4.14e-11	60.8
Msa0799680	AT1G68190.3	37.931	87	46	1	1	87	10	88	4.14e-11	60.8
Msa0799680	AT1G68190.2	37.931	87	46	1	1	87	39	117	6.04e-11	60.5

Find 44 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTGATGATGGAAAGTTAT+AGG	0.287871	5_3:+12956944	None:intergenic
CTTACAAACCCACATGGATT+TGG	0.305253	5_3:-12956856	Msa0799680:intron
TGTTCATGTATTCTGTTGTT+AGG	0.314824	5_3:+12955258	None:intergenic
CTCTTTGTTTCATAGTTTCC+AGG	0.319859	5_3:-12955480	Msa0799680:intron
AATAATCAGGTTAGAGTTCA+TGG	0.327088	5_3:-12955228	Msa0799680:CDS
AGTTAGCTAGTAGACATGTT+AGG	0.334611	5_3:-12956075	Msa0799680:CDS
TTAGAATTCCCATCAGCATT+AGG	0.367971	5_3:+12955315	None:intergenic
TTTGAGAAGTGAGAAAGCTT+TGG	0.415379	5_3:+12957029	None:intergenic
TGAACATGCATCAAATAATC+AGG	0.417562	5_3:-12955241	Msa0799680:CDS
GCCGGGTTGTCTGCATTACT+AGG	0.455216	5_3:+12955450	None:intergenic
AAGATGGAGGTTGTTGATGA+TGG	0.460545	5_3:+12956933	None:intergenic
GAGAGAAGCAACAAAATCAT+AGG	0.461871	5_3:-12955362	Msa0799680:CDS
GGATCTAGAGGTTGTGAAGC+CGG	0.462473	5_3:+12955432	None:intergenic
TCAGCATTAGGTTCTGAAGT+TGG	0.480629	5_3:+12955327	None:intergenic
GTGATGAAGTTTGATGAAGA+TGG	0.483306	5_3:+12956917	None:intergenic
TCGCACCGCGGCACGTCACT+CGG	0.487301	5_3:+12956037	None:intergenic
CATATCACATTGCAAACAAA+GGG	0.494623	5_3:+12955875	None:intergenic
ACCCTTCAACCCAAACCAAA+AGG	0.499384	5_3:-12956989	Msa0799680:five_prime_UTR
GTTAGCTAGTAGACATGTTA+GGG	0.499857	5_3:-12956074	Msa0799680:CDS
TTAGGTTCTGAAGTTGGAAC+CGG	0.500416	5_3:+12955333	None:intergenic
GCATTACTAGGTTTATCGCC+TGG	0.511209	5_3:+12955462	None:intergenic
TGCTGATGGGAATTCTAAGA+TGG	0.518367	5_3:-12955310	Msa0799680:CDS
GATCCAGGTGATATTAAAAG+AGG	0.532561	5_3:-12955414	Msa0799680:CDS
GATCTAGAGGTTGTGAAGCC+GGG	0.534120	5_3:+12955433	None:intergenic
TCATATCACATTGCAAACAA+AGG	0.534969	5_3:+12955874	None:intergenic
TTAATATCACCTGGATCTAG+AGG	0.539036	5_3:+12955420	None:intergenic
GCTTCACAACCTCTAGATCC+AGG	0.543997	5_3:-12955429	Msa0799680:CDS
TTCTTCTATTGCGAAACAGA+TGG	0.548785	5_3:-12955903	Msa0799680:CDS
ACTTCAGAACCTAATGCTGA+TGG	0.548946	5_3:-12955324	Msa0799680:CDS
GCTAGTAGACATGTTAGGGT+TGG	0.553453	5_3:-12956070	Msa0799680:CDS
ACCTAGTAATGCAGACAACC+CGG	0.558690	5_3:-12955451	Msa0799680:CDS
AACTTTCTTACAAACCCACA+TGG	0.572929	5_3:-12956862	Msa0799680:five_prime_UTR
ACAAAATCATAGGATGCCTC+CGG	0.578363	5_3:-12955352	Msa0799680:CDS
ATAATCAGGTTAGAGTTCAT+GGG	0.583574	5_3:-12955227	Msa0799680:CDS
CAAGTCCGAGTGACGTGCCG+CGG	0.583612	5_3:-12956042	Msa0799680:CDS
CTTCAGAACCTAATGCTGAT+GGG	0.588602	5_3:-12955323	Msa0799680:CDS
CTGTCGTGCTTGTGATGAGA+AGG	0.598560	5_3:-12956596	Msa0799680:intron
GGTTCTGAAGTTGGAACCGG+AGG	0.621508	5_3:+12955336	None:intergenic
ATGAAGTTTGATGAAGATGG+AGG	0.626151	5_3:+12956920	None:intergenic
GATATTCACCAAATCCATGT+GGG	0.642038	5_3:+12956848	None:intergenic
GACATATGTGAGAATGCCCC+TGG	0.645262	5_3:-12956016	Msa0799680:intron
AGATATTCACCAAATCCATG+TGG	0.682468	5_3:+12956847	None:intergenic
AGCAGCACAGAAAACTATAG+CGG	0.689026	5_3:+12956633	None:intergenic
TTCTCACATATGTCGCACCG+CGG	0.743597	5_3:+12956025	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATCAAAAAAAACTATGTT+GGG	+	chr5_3:12955461-12955480	None:intergenic	15.0%
!!	TTTATCAAAAAAAACTATGT+TGG	+	chr5_3:12955462-12955481	None:intergenic	15.0%
!!!	TATTTTAAAGTAGATAATTC+AGG	-	chr5_3:12955562-12955581	Msa0799680:intron	15.0%
!!	ATCCAATTATAAAAAATTGA+TGG	+	chr5_3:12955849-12955868	None:intergenic	15.0%
!!!	ATTTGATTTGATATTTTTTG+TGG	-	chr5_3:12956020-12956039	Msa0799680:CDS	15.0%
!!!	TAATAATTTTGATACATTGA+GGG	+	chr5_3:12956651-12956670	None:intergenic	15.0%
!!!	ATAATAATTTTGATACATTG+AGG	+	chr5_3:12956652-12956671	None:intergenic	15.0%
!!	TTATCAAAAAAAACTATGTT+GGG	+	chr5_3:12955461-12955480	None:intergenic	15.0%
!!	TTTATCAAAAAAAACTATGT+TGG	+	chr5_3:12955462-12955481	None:intergenic	15.0%
!!!	TATTTTAAAGTAGATAATTC+AGG	-	chr5_3:12955562-12955581	Msa0799680:intron	15.0%
!!	ATCCAATTATAAAAAATTGA+TGG	+	chr5_3:12955849-12955868	None:intergenic	15.0%
!!!	ATTTGATTTGATATTTTTTG+TGG	-	chr5_3:12956020-12956039	Msa0799680:CDS	15.0%
!!!	TAATAATTTTGATACATTGA+GGG	+	chr5_3:12956651-12956670	None:intergenic	15.0%
!!!	ATAATAATTTTGATACATTG+AGG	+	chr5_3:12956652-12956671	None:intergenic	15.0%
!!!	GACCATCAATTTTTTATAAT+TGG	-	chr5_3:12955844-12955863	Msa0799680:intron	20.0%
!!	TTGTGTAAATTCAAAATCTA+AGG	-	chr5_3:12956046-12956065	Msa0799680:CDS	20.0%
!!	GATTATACTTAAAACTAACT+TGG	+	chr5_3:12956159-12956178	None:intergenic	20.0%
!!!	AGTTAGTTTTAAGTATAATC+TGG	-	chr5_3:12956159-12956178	Msa0799680:intron	20.0%
!!!	TTTTAAGTATAATCTGGTAT+TGG	-	chr5_3:12956165-12956184	Msa0799680:intron	20.0%
!!!	AATTCAAGACTAATTCATTT+TGG	+	chr5_3:12956581-12956600	None:intergenic	20.0%
!!!	AATAATTTTGATACATTGAG+GGG	+	chr5_3:12956650-12956669	None:intergenic	20.0%
!!!	GACCATCAATTTTTTATAAT+TGG	-	chr5_3:12955844-12955863	Msa0799680:intron	20.0%
!!	TTGTGTAAATTCAAAATCTA+AGG	-	chr5_3:12956046-12956065	Msa0799680:CDS	20.0%
!!	GATTATACTTAAAACTAACT+TGG	+	chr5_3:12956159-12956178	None:intergenic	20.0%
!!!	AGTTAGTTTTAAGTATAATC+TGG	-	chr5_3:12956159-12956178	Msa0799680:intron	20.0%
!!!	TTTTAAGTATAATCTGGTAT+TGG	-	chr5_3:12956165-12956184	Msa0799680:intron	20.0%
!!!	AATTCAAGACTAATTCATTT+TGG	+	chr5_3:12956581-12956600	None:intergenic	20.0%
!!!	AATAATTTTGATACATTGAG+GGG	+	chr5_3:12956650-12956669	None:intergenic	20.0%
!!	TTTAAAGTAGATAATTCAGG+TGG	-	chr5_3:12955565-12955584	Msa0799680:intron	25.0%
!	TTAACCTAATCCAACATAAA+TGG	+	chr5_3:12955947-12955966	None:intergenic	25.0%
!	TTATGAAACTAAATTGCAAG+TGG	+	chr5_3:12955983-12956002	None:intergenic	25.0%
!!!	AATGACGATTTTAGCTTATA+AGG	+	chr5_3:12956097-12956116	None:intergenic	25.0%
!	TTCTTTAAACAAAATCGAGA+AGG	+	chr5_3:12956134-12956153	None:intergenic	25.0%
!!	GACTAATTCATTTTGGATAA+AGG	+	chr5_3:12956574-12956593	None:intergenic	25.0%
!!!	TATCTTTTGTTAGTCACTTT+CGG	-	chr5_3:12956721-12956740	Msa0799680:intron	25.0%
!!!	TTTGAAATTTTGATACGTTC+AGG	-	chr5_3:12956751-12956770	Msa0799680:intron	25.0%
!!!	TTGAAATTTTGATACGTTCA+GGG	-	chr5_3:12956752-12956771	Msa0799680:intron	25.0%
!	GGTATTATACATACATTTGA+AGG	+	chr5_3:12956851-12956870	None:intergenic	25.0%
!!	TTTAAAGTAGATAATTCAGG+TGG	-	chr5_3:12955565-12955584	Msa0799680:intron	25.0%
!	TTAACCTAATCCAACATAAA+TGG	+	chr5_3:12955947-12955966	None:intergenic	25.0%
!	TTATGAAACTAAATTGCAAG+TGG	+	chr5_3:12955983-12956002	None:intergenic	25.0%
!!!	AATGACGATTTTAGCTTATA+AGG	+	chr5_3:12956097-12956116	None:intergenic	25.0%
!	TTCTTTAAACAAAATCGAGA+AGG	+	chr5_3:12956134-12956153	None:intergenic	25.0%
!!	GACTAATTCATTTTGGATAA+AGG	+	chr5_3:12956574-12956593	None:intergenic	25.0%
!!!	TATCTTTTGTTAGTCACTTT+CGG	-	chr5_3:12956721-12956740	Msa0799680:intron	25.0%
!!!	TTTGAAATTTTGATACGTTC+AGG	-	chr5_3:12956751-12956770	Msa0799680:intron	25.0%
!!!	TTGAAATTTTGATACGTTCA+GGG	-	chr5_3:12956752-12956771	Msa0799680:intron	25.0%
!	GGTATTATACATACATTTGA+AGG	+	chr5_3:12956851-12956870	None:intergenic	25.0%
!!	ATAGGATTTTGAAGGAGTTT+GGG	+	chr5_3:12955391-12955410	None:intergenic	30.0%
!!	TATAGGATTTTGAAGGAGTT+TGG	+	chr5_3:12955392-12955411	None:intergenic	30.0%
!	GGAAAGTTATAGGATTTTGA+AGG	+	chr5_3:12955399-12955418	None:intergenic	30.0%
!!	TGTTGATGATGGAAAGTTAT+AGG	+	chr5_3:12955409-12955428	None:intergenic	30.0%
	TTGAATGAGTCCATTTATGT+TGG	-	chr5_3:12955934-12955953	Msa0799680:intron	30.0%
!	TGTTGGATTAGGTTAAAGAT+TGG	-	chr5_3:12955951-12955970	Msa0799680:intron	30.0%
	GATTAGGTTAAAGATTGGAT+TGG	-	chr5_3:12955956-12955975	Msa0799680:intron	30.0%
	CTTATAAGGTCAAACTCTTA+CGG	+	chr5_3:12956083-12956102	None:intergenic	30.0%
!!	TGGAATTTGATTGATTTTCC+TGG	-	chr5_3:12956185-12956204	Msa0799680:intron	30.0%
	AAAGAAGAAACTTCTTACCA+GGG	+	chr5_3:12956354-12956373	None:intergenic	30.0%
	AAAAGAAGAAACTTCTTACC+AGG	+	chr5_3:12956355-12956374	None:intergenic	30.0%
	CATATCACATTGCAAACAAA+GGG	+	chr5_3:12956478-12956497	None:intergenic	30.0%
	TCATATCACATTGCAAACAA+AGG	+	chr5_3:12956479-12956498	None:intergenic	30.0%
	TGTGATATGATAGTTCATGT+TGG	-	chr5_3:12956489-12956508	Msa0799680:intron	30.0%
	ATGGAAGATATCTTCTCTTT+AGG	-	chr5_3:12956526-12956545	Msa0799680:intron	30.0%
!	TTTTAATCCTTGAATGTGTG+AGG	-	chr5_3:12956612-12956631	Msa0799680:CDS	30.0%
	GACTAATAAAAGACACATTC+AGG	+	chr5_3:12956684-12956703	None:intergenic	30.0%
!	GTGTCTTTTATTAGTCAGTT+TGG	-	chr5_3:12956688-12956707	Msa0799680:exon	30.0%
	ACTAACAAAAGATACATCTG+AGG	+	chr5_3:12956715-12956734	None:intergenic	30.0%
!!	ATCTTTTGTTAGTCACTTTC+GGG	-	chr5_3:12956722-12956741	Msa0799680:intron	30.0%
	TCCACTTCCTAAACAAAAAA+TGG	-	chr5_3:12956965-12956984	Msa0799680:five_prime_UTR	30.0%
	CCACTTCCTAAACAAAAAAT+GGG	-	chr5_3:12956966-12956985	Msa0799680:five_prime_UTR	30.0%
!!!	TTCTCTCCCATTTTTTGTTT+AGG	+	chr5_3:12956975-12956994	None:intergenic	30.0%
	TGTTCATGTATTCTGTTGTT+AGG	+	chr5_3:12957095-12957114	None:intergenic	30.0%
	TGAACATGCATCAAATAATC+AGG	-	chr5_3:12957109-12957128	Msa0799680:five_prime_UTR	30.0%
	AATAATCAGGTTAGAGTTCA+TGG	-	chr5_3:12957122-12957141	Msa0799680:five_prime_UTR	30.0%
	ATAATCAGGTTAGAGTTCAT+GGG	-	chr5_3:12957123-12957142	Msa0799680:five_prime_UTR	30.0%
!!	ATAGGATTTTGAAGGAGTTT+GGG	+	chr5_3:12955391-12955410	None:intergenic	30.0%
!!	TATAGGATTTTGAAGGAGTT+TGG	+	chr5_3:12955392-12955411	None:intergenic	30.0%
!	GGAAAGTTATAGGATTTTGA+AGG	+	chr5_3:12955399-12955418	None:intergenic	30.0%
!!	TGTTGATGATGGAAAGTTAT+AGG	+	chr5_3:12955409-12955428	None:intergenic	30.0%
	TTGAATGAGTCCATTTATGT+TGG	-	chr5_3:12955934-12955953	Msa0799680:intron	30.0%
!	TGTTGGATTAGGTTAAAGAT+TGG	-	chr5_3:12955951-12955970	Msa0799680:intron	30.0%
	GATTAGGTTAAAGATTGGAT+TGG	-	chr5_3:12955956-12955975	Msa0799680:intron	30.0%
	CTTATAAGGTCAAACTCTTA+CGG	+	chr5_3:12956083-12956102	None:intergenic	30.0%
!!	TGGAATTTGATTGATTTTCC+TGG	-	chr5_3:12956185-12956204	Msa0799680:intron	30.0%
	AAAGAAGAAACTTCTTACCA+GGG	+	chr5_3:12956354-12956373	None:intergenic	30.0%
	AAAAGAAGAAACTTCTTACC+AGG	+	chr5_3:12956355-12956374	None:intergenic	30.0%
	CATATCACATTGCAAACAAA+GGG	+	chr5_3:12956478-12956497	None:intergenic	30.0%
	TCATATCACATTGCAAACAA+AGG	+	chr5_3:12956479-12956498	None:intergenic	30.0%
	TGTGATATGATAGTTCATGT+TGG	-	chr5_3:12956489-12956508	Msa0799680:intron	30.0%
	ATGGAAGATATCTTCTCTTT+AGG	-	chr5_3:12956526-12956545	Msa0799680:intron	30.0%
!	TTTTAATCCTTGAATGTGTG+AGG	-	chr5_3:12956612-12956631	Msa0799680:CDS	30.0%
	GACTAATAAAAGACACATTC+AGG	+	chr5_3:12956684-12956703	None:intergenic	30.0%
!	GTGTCTTTTATTAGTCAGTT+TGG	-	chr5_3:12956688-12956707	Msa0799680:exon	30.0%
	ACTAACAAAAGATACATCTG+AGG	+	chr5_3:12956715-12956734	None:intergenic	30.0%
!!	ATCTTTTGTTAGTCACTTTC+GGG	-	chr5_3:12956722-12956741	Msa0799680:intron	30.0%
	TCCACTTCCTAAACAAAAAA+TGG	-	chr5_3:12956965-12956984	Msa0799680:five_prime_UTR	30.0%
	CCACTTCCTAAACAAAAAAT+GGG	-	chr5_3:12956966-12956985	Msa0799680:five_prime_UTR	30.0%
!!!	TTCTCTCCCATTTTTTGTTT+AGG	+	chr5_3:12956975-12956994	None:intergenic	30.0%
	TGTTCATGTATTCTGTTGTT+AGG	+	chr5_3:12957095-12957114	None:intergenic	30.0%
	TGAACATGCATCAAATAATC+AGG	-	chr5_3:12957109-12957128	Msa0799680:five_prime_UTR	30.0%
	AATAATCAGGTTAGAGTTCA+TGG	-	chr5_3:12957122-12957141	Msa0799680:five_prime_UTR	30.0%
	ATAATCAGGTTAGAGTTCAT+GGG	-	chr5_3:12957123-12957142	Msa0799680:five_prime_UTR	30.0%
	TTTGAGAAGTGAGAAAGCTT+TGG	+	chr5_3:12955324-12955343	None:intergenic	35.0%
!!	TAGGATTTTGAAGGAGTTTG+GGG	+	chr5_3:12955390-12955409	None:intergenic	35.0%
	ATGAAGTTTGATGAAGATGG+AGG	+	chr5_3:12955433-12955452	None:intergenic	35.0%
	GTGATGAAGTTTGATGAAGA+TGG	+	chr5_3:12955436-12955455	None:intergenic	35.0%
	AACTTTCTTACAAACCCACA+TGG	-	chr5_3:12955488-12955507	Msa0799680:intron	35.0%
	GATATTCACCAAATCCATGT+GGG	+	chr5_3:12955505-12955524	None:intergenic	35.0%
	AGATATTCACCAAATCCATG+TGG	+	chr5_3:12955506-12955525	None:intergenic	35.0%
	GAGTCCATTTATGTTGGATT+AGG	-	chr5_3:12955940-12955959	Msa0799680:intron	35.0%
	TTAGTTGAAAGACATTGACC+AGG	+	chr5_3:12956206-12956225	None:intergenic	35.0%
	GGTCAATGTCTTTCAACTAA+TGG	-	chr5_3:12956206-12956225	Msa0799680:intron	35.0%
!	GGTTCAAAGTTTGCAACTTT+TGG	-	chr5_3:12956227-12956246	Msa0799680:intron	35.0%
!!	TTGCAACTTTTGGAAATTGC+AGG	-	chr5_3:12956237-12956256	Msa0799680:intron	35.0%
	AGTTAGCTAGTAGACATGTT+AGG	-	chr5_3:12956275-12956294	Msa0799680:intron	35.0%
	GTTAGCTAGTAGACATGTTA+GGG	-	chr5_3:12956276-12956295	Msa0799680:intron	35.0%
	AAGAAGAAACTTCTTACCAG+GGG	+	chr5_3:12956353-12956372	None:intergenic	35.0%
	ATCAGAAGAACAACACTACA+AGG	+	chr5_3:12956381-12956400	None:intergenic	35.0%
	TTCTTCTATTGCGAAACAGA+TGG	-	chr5_3:12956447-12956466	Msa0799680:intron	35.0%
	GATATGATAGTTCATGTTGG+TGG	-	chr5_3:12956492-12956511	Msa0799680:intron	35.0%
!!	TCTTTTGTTAGTCACTTTCG+GGG	-	chr5_3:12956723-12956742	Msa0799680:intron	35.0%
	TGACATCGTTTCACACATTT+AGG	-	chr5_3:12956782-12956801	Msa0799680:intron	35.0%
	GACATCGTTTCACACATTTA+GGG	-	chr5_3:12956783-12956802	Msa0799680:intron	35.0%
	CTGGAAACTATGAAACAAAG+AGG	+	chr5_3:12956872-12956891	None:intergenic	35.0%
!	CTCTTTGTTTCATAGTTTCC+AGG	-	chr5_3:12956870-12956889	Msa0799680:five_prime_UTR	35.0%
	TTAATATCACCTGGATCTAG+AGG	+	chr5_3:12956933-12956952	None:intergenic	35.0%
	GATCCAGGTGATATTAAAAG+AGG	-	chr5_3:12956936-12956955	Msa0799680:five_prime_UTR	35.0%
!	TGTCCTCTTTTAATATCACC+TGG	+	chr5_3:12956942-12956961	None:intergenic	35.0%
!!!	CCCATTTTTTGTTTAGGAAG+TGG	+	chr5_3:12956969-12956988	None:intergenic	35.0%
	GAGAGAAGCAACAAAATCAT+AGG	-	chr5_3:12956988-12957007	Msa0799680:five_prime_UTR	35.0%
	TTAGAATTCCCATCAGCATT+AGG	+	chr5_3:12957038-12957057	None:intergenic	35.0%
	TTTGAGAAGTGAGAAAGCTT+TGG	+	chr5_3:12955324-12955343	None:intergenic	35.0%
!!	TAGGATTTTGAAGGAGTTTG+GGG	+	chr5_3:12955390-12955409	None:intergenic	35.0%
	ATGAAGTTTGATGAAGATGG+AGG	+	chr5_3:12955433-12955452	None:intergenic	35.0%
	GTGATGAAGTTTGATGAAGA+TGG	+	chr5_3:12955436-12955455	None:intergenic	35.0%
	AACTTTCTTACAAACCCACA+TGG	-	chr5_3:12955488-12955507	Msa0799680:intron	35.0%
	GATATTCACCAAATCCATGT+GGG	+	chr5_3:12955505-12955524	None:intergenic	35.0%
	AGATATTCACCAAATCCATG+TGG	+	chr5_3:12955506-12955525	None:intergenic	35.0%
	GAGTCCATTTATGTTGGATT+AGG	-	chr5_3:12955940-12955959	Msa0799680:intron	35.0%
	TTAGTTGAAAGACATTGACC+AGG	+	chr5_3:12956206-12956225	None:intergenic	35.0%
	GGTCAATGTCTTTCAACTAA+TGG	-	chr5_3:12956206-12956225	Msa0799680:intron	35.0%
!	GGTTCAAAGTTTGCAACTTT+TGG	-	chr5_3:12956227-12956246	Msa0799680:intron	35.0%
!!	TTGCAACTTTTGGAAATTGC+AGG	-	chr5_3:12956237-12956256	Msa0799680:intron	35.0%
	AGTTAGCTAGTAGACATGTT+AGG	-	chr5_3:12956275-12956294	Msa0799680:intron	35.0%
	GTTAGCTAGTAGACATGTTA+GGG	-	chr5_3:12956276-12956295	Msa0799680:intron	35.0%
	AAGAAGAAACTTCTTACCAG+GGG	+	chr5_3:12956353-12956372	None:intergenic	35.0%
	ATCAGAAGAACAACACTACA+AGG	+	chr5_3:12956381-12956400	None:intergenic	35.0%
	TTCTTCTATTGCGAAACAGA+TGG	-	chr5_3:12956447-12956466	Msa0799680:intron	35.0%
	GATATGATAGTTCATGTTGG+TGG	-	chr5_3:12956492-12956511	Msa0799680:intron	35.0%
!!	TCTTTTGTTAGTCACTTTCG+GGG	-	chr5_3:12956723-12956742	Msa0799680:intron	35.0%
	TGACATCGTTTCACACATTT+AGG	-	chr5_3:12956782-12956801	Msa0799680:intron	35.0%
	GACATCGTTTCACACATTTA+GGG	-	chr5_3:12956783-12956802	Msa0799680:intron	35.0%
	CTGGAAACTATGAAACAAAG+AGG	+	chr5_3:12956872-12956891	None:intergenic	35.0%
!	CTCTTTGTTTCATAGTTTCC+AGG	-	chr5_3:12956870-12956889	Msa0799680:five_prime_UTR	35.0%
	TTAATATCACCTGGATCTAG+AGG	+	chr5_3:12956933-12956952	None:intergenic	35.0%
	GATCCAGGTGATATTAAAAG+AGG	-	chr5_3:12956936-12956955	Msa0799680:five_prime_UTR	35.0%
!	TGTCCTCTTTTAATATCACC+TGG	+	chr5_3:12956942-12956961	None:intergenic	35.0%
!!!	CCCATTTTTTGTTTAGGAAG+TGG	+	chr5_3:12956969-12956988	None:intergenic	35.0%
	GAGAGAAGCAACAAAATCAT+AGG	-	chr5_3:12956988-12957007	Msa0799680:five_prime_UTR	35.0%
	TTAGAATTCCCATCAGCATT+AGG	+	chr5_3:12957038-12957057	None:intergenic	35.0%
!!!	ACCTTTTGGTTTGGGTTGAA+GGG	+	chr5_3:12955365-12955384	None:intergenic	40.0%
!!	AGGATTTTGAAGGAGTTTGG+GGG	+	chr5_3:12955389-12955408	None:intergenic	40.0%
!	AAGATGGAGGTTGTTGATGA+TGG	+	chr5_3:12955420-12955439	None:intergenic	40.0%
	CTTACAAACCCACATGGATT+TGG	-	chr5_3:12955494-12955513	Msa0799680:intron	40.0%
	AGCAGCACAGAAAACTATAG+CGG	+	chr5_3:12955720-12955739	None:intergenic	40.0%
	TCTCTTTAGGCAAAGAGTTG+AGG	-	chr5_3:12956539-12956558	Msa0799680:intron	40.0%
	ACAAAATCATAGGATGCCTC+CGG	-	chr5_3:12956998-12957017	Msa0799680:five_prime_UTR	40.0%
!!	TTAGGTTCTGAAGTTGGAAC+CGG	+	chr5_3:12957020-12957039	None:intergenic	40.0%
!!	TCAGCATTAGGTTCTGAAGT+TGG	+	chr5_3:12957026-12957045	None:intergenic	40.0%
	ACTTCAGAACCTAATGCTGA+TGG	-	chr5_3:12957026-12957045	Msa0799680:five_prime_UTR	40.0%
	CTTCAGAACCTAATGCTGAT+GGG	-	chr5_3:12957027-12957046	Msa0799680:five_prime_UTR	40.0%
!	TGCTGATGGGAATTCTAAGA+TGG	-	chr5_3:12957040-12957059	Msa0799680:five_prime_UTR	40.0%
!!!	ACCTTTTGGTTTGGGTTGAA+GGG	+	chr5_3:12955365-12955384	None:intergenic	40.0%
!!	AGGATTTTGAAGGAGTTTGG+GGG	+	chr5_3:12955389-12955408	None:intergenic	40.0%
!	AAGATGGAGGTTGTTGATGA+TGG	+	chr5_3:12955420-12955439	None:intergenic	40.0%
	CTTACAAACCCACATGGATT+TGG	-	chr5_3:12955494-12955513	Msa0799680:intron	40.0%
	AGCAGCACAGAAAACTATAG+CGG	+	chr5_3:12955720-12955739	None:intergenic	40.0%
	TCTCTTTAGGCAAAGAGTTG+AGG	-	chr5_3:12956539-12956558	Msa0799680:intron	40.0%
	ACAAAATCATAGGATGCCTC+CGG	-	chr5_3:12956998-12957017	Msa0799680:five_prime_UTR	40.0%
!!	TTAGGTTCTGAAGTTGGAAC+CGG	+	chr5_3:12957020-12957039	None:intergenic	40.0%
!!	TCAGCATTAGGTTCTGAAGT+TGG	+	chr5_3:12957026-12957045	None:intergenic	40.0%
	ACTTCAGAACCTAATGCTGA+TGG	-	chr5_3:12957026-12957045	Msa0799680:five_prime_UTR	40.0%
	CTTCAGAACCTAATGCTGAT+GGG	-	chr5_3:12957027-12957046	Msa0799680:five_prime_UTR	40.0%
!	TGCTGATGGGAATTCTAAGA+TGG	-	chr5_3:12957040-12957059	Msa0799680:five_prime_UTR	40.0%
	ACCCTTCAACCCAAACCAAA+AGG	-	chr5_3:12955361-12955380	Msa0799680:CDS	45.0%
!!!	GACCTTTTGGTTTGGGTTGA+AGG	+	chr5_3:12955366-12955385	None:intergenic	45.0%
!!	GGATTTTGAAGGAGTTTGGG+GGG	+	chr5_3:12955388-12955407	None:intergenic	45.0%
!!	AGTTTTCTGTGCTGCTGATG+AGG	-	chr5_3:12955724-12955743	Msa0799680:intron	45.0%
	GCTAGTAGACATGTTAGGGT+TGG	-	chr5_3:12956280-12956299	Msa0799680:intron	45.0%
!!	GTTGGTGGTAAAAGAACGCA+TGG	-	chr5_3:12956507-12956526	Msa0799680:intron	45.0%
	GCATTACTAGGTTTATCGCC+TGG	+	chr5_3:12956891-12956910	None:intergenic	45.0%
	ACCTAGTAATGCAGACAACC+CGG	-	chr5_3:12956899-12956918	Msa0799680:five_prime_UTR	45.0%
	ACCCTTCAACCCAAACCAAA+AGG	-	chr5_3:12955361-12955380	Msa0799680:CDS	45.0%
!!!	GACCTTTTGGTTTGGGTTGA+AGG	+	chr5_3:12955366-12955385	None:intergenic	45.0%
!!	GGATTTTGAAGGAGTTTGGG+GGG	+	chr5_3:12955388-12955407	None:intergenic	45.0%
!!	AGTTTTCTGTGCTGCTGATG+AGG	-	chr5_3:12955724-12955743	Msa0799680:intron	45.0%
	GCTAGTAGACATGTTAGGGT+TGG	-	chr5_3:12956280-12956299	Msa0799680:intron	45.0%
!!	GTTGGTGGTAAAAGAACGCA+TGG	-	chr5_3:12956507-12956526	Msa0799680:intron	45.0%
	GCATTACTAGGTTTATCGCC+TGG	+	chr5_3:12956891-12956910	None:intergenic	45.0%
	ACCTAGTAATGCAGACAACC+CGG	-	chr5_3:12956899-12956918	Msa0799680:five_prime_UTR	45.0%
!!!	TTGGGGGGACCTTTTGGTTT+GGG	+	chr5_3:12955373-12955392	None:intergenic	50.0%
!!	TTTGGGGGGACCTTTTGGTT+TGG	+	chr5_3:12955374-12955393	None:intergenic	50.0%
	CTGTCGTGCTTGTGATGAGA+AGG	-	chr5_3:12955754-12955773	Msa0799680:intron	50.0%
	TTCTCACATATGTCGCACCG+CGG	+	chr5_3:12956328-12956347	None:intergenic	50.0%
	GACATATGTGAGAATGCCCC+TGG	-	chr5_3:12956334-12956353	Msa0799680:intron	50.0%
	GTGACTGCCTCACACATTCA+AGG	+	chr5_3:12956622-12956641	None:intergenic	50.0%
	GATCTAGAGGTTGTGAAGCC+GGG	+	chr5_3:12956920-12956939	None:intergenic	50.0%
	GGATCTAGAGGTTGTGAAGC+CGG	+	chr5_3:12956921-12956940	None:intergenic	50.0%
	GCTTCACAACCTCTAGATCC+AGG	-	chr5_3:12956921-12956940	Msa0799680:five_prime_UTR	50.0%
!!!	TTGGGGGGACCTTTTGGTTT+GGG	+	chr5_3:12955373-12955392	None:intergenic	50.0%
!!	TTTGGGGGGACCTTTTGGTT+TGG	+	chr5_3:12955374-12955393	None:intergenic	50.0%
	CTGTCGTGCTTGTGATGAGA+AGG	-	chr5_3:12955754-12955773	Msa0799680:intron	50.0%
	TTCTCACATATGTCGCACCG+CGG	+	chr5_3:12956328-12956347	None:intergenic	50.0%
	GACATATGTGAGAATGCCCC+TGG	-	chr5_3:12956334-12956353	Msa0799680:intron	50.0%
	GTGACTGCCTCACACATTCA+AGG	+	chr5_3:12956622-12956641	None:intergenic	50.0%
	GATCTAGAGGTTGTGAAGCC+GGG	+	chr5_3:12956920-12956939	None:intergenic	50.0%
	GGATCTAGAGGTTGTGAAGC+CGG	+	chr5_3:12956921-12956940	None:intergenic	50.0%
	GCTTCACAACCTCTAGATCC+AGG	-	chr5_3:12956921-12956940	Msa0799680:five_prime_UTR	50.0%
!	AGGAGTTTGGGGGGACCTTT+TGG	+	chr5_3:12955379-12955398	None:intergenic	55.0%
	GCCGGGTTGTCTGCATTACT+AGG	+	chr5_3:12956903-12956922	None:intergenic	55.0%
!!	GGTTCTGAAGTTGGAACCGG+AGG	+	chr5_3:12957017-12957036	None:intergenic	55.0%
!	AGGAGTTTGGGGGGACCTTT+TGG	+	chr5_3:12955379-12955398	None:intergenic	55.0%
	GCCGGGTTGTCTGCATTACT+AGG	+	chr5_3:12956903-12956922	None:intergenic	55.0%
!!	GGTTCTGAAGTTGGAACCGG+AGG	+	chr5_3:12957017-12957036	None:intergenic	55.0%
	CAAGTCCGAGTGACGTGCCG+CGG	-	chr5_3:12956308-12956327	Msa0799680:intron	65.0%
	CAAGTCCGAGTGACGTGCCG+CGG	-	chr5_3:12956308-12956327	Msa0799680:intron	65.0%
	TCGCACCGCGGCACGTCACT+CGG	+	chr5_3:12956316-12956335	None:intergenic	70.0%
	TCGCACCGCGGCACGTCACT+CGG	+	chr5_3:12956316-12956335	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	12955221	12957151	12955221	ID=Msa0799680;Name=Msa0799680
chr5_3	mRNA	12955221	12957151	12955221	ID=Msa0799680-mRNA-1;Parent=Msa0799680;Name=Msa0799680-mRNA-1;_AED=0.25;_eAED=0.25;_QI=319\|0.75\|0.6\|1\|0.5\|0.4\|5\|0\|172
chr5_3	exon	12955221	12955487	12955221	ID=Msa0799680-mRNA-1:exon:5374;Parent=Msa0799680-mRNA-1
chr5_3	exon	12955866	12955927	12955866	ID=Msa0799680-mRNA-1:exon:5373;Parent=Msa0799680-mRNA-1
chr5_3	exon	12956017	12956113	12956017	ID=Msa0799680-mRNA-1:exon:5372;Parent=Msa0799680-mRNA-1
chr5_3	exon	12956597	12956713	12956597	ID=Msa0799680-mRNA-1:exon:5371;Parent=Msa0799680-mRNA-1
chr5_3	exon	12956857	12957151	12956857	ID=Msa0799680-mRNA-1:exon:5370;Parent=Msa0799680-mRNA-1
chr5_3	five_prime_UTR	12956857	12957151	12956857	ID=Msa0799680-mRNA-1:five_prime_utr;Parent=Msa0799680-mRNA-1
chr5_3	five_prime_UTR	12956690	12956713	12956690	ID=Msa0799680-mRNA-1:five_prime_utr;Parent=Msa0799680-mRNA-1
chr5_3	CDS	12956597	12956689	12956597	ID=Msa0799680-mRNA-1:cds;Parent=Msa0799680-mRNA-1
chr5_3	CDS	12956017	12956113	12956017	ID=Msa0799680-mRNA-1:cds;Parent=Msa0799680-mRNA-1
chr5_3	CDS	12955866	12955927	12955866	ID=Msa0799680-mRNA-1:cds;Parent=Msa0799680-mRNA-1
chr5_3	CDS	12955221	12955487	12955221	ID=Msa0799680-mRNA-1:cds;Parent=Msa0799680-mRNA-1

Gene Sequence

>Msa0799680

ATGCGAACGCTTTGTGATGCTTGTGAGAGTGCTGCCGCTATAGTTTTCTGTGCTGCTGATGAGGCTGCACTCTGTCGTGCTTGTGATGAGAAGGTTCATATGTGCAATAAGTTAGCTAGTAGACATGTTAGGGTTGGTCTTGCAAGTCCGAGTGACGTGCCGCGGTGCGACATATGTGAGAATGCCCCTGCTTTCTTCTATTGCGAAACAGATGGAAGTTCCCTTTGTTTGCAATGTGATATGATAGTTCATTTTCCAGGCGATAAACCTAGTAATGCAGACAACCCGGCTTCACAACCTCTAGATCCAGGTGATATTAAAAGAGGACAAAGTCCACTTCCTAAACAAAAAATGGGAGAGAAGCAACAAAATCATAGGATGCCTCCGGTTCCAACTTCAGAACCTAATGCTGATGGGAATTCTAAGATGGAAAATAAATTGATTGATTTGAACATGAAGCCTAACAACAGAATACATGAACATGCATCAAATAATCAGGTTAGAGTTCATGGGAAGTAA

Protein sequence

>Msa0799680

MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHFPGDKPSNADNPASQPLDPGDIKRGQSPLPKQKMGEKQQNHRMPPVPTSEPNADGNSKMENKLIDLNMKPNNRIHEHASNNQVRVHGK*