Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002050 | XP_004506289.1 | 90.855 | 339 | 29 | 1 | 4 | 340 | 3 | 341 | 0.0 | 621 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002050 | sp|Q8VYR9|KEA5_ARATH | 80.635 | 315 | 58 | 2 | 29 | 341 | 21 | 334 | 3.78e-179 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002050 | A0A1S2YKT5 | 90.855 | 339 | 29 | 1 | 4 | 340 | 3 | 341 | 0.0 | 621 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031180 | Msa1002050 | 0.802510 | 5.420731e-49 | -8.615850e-47 |
| Msa0034400 | Msa1002050 | 0.804199 | 2.422094e-49 | -8.615850e-47 |
| Msa0054820 | Msa1002050 | 0.812780 | 3.568974e-51 | -8.615850e-47 |
| Msa0056450 | Msa1002050 | 0.801987 | 6.946635e-49 | -8.615850e-47 |
| Msa0064110 | Msa1002050 | 0.829618 | 4.653106e-55 | -8.615850e-47 |
| Msa0078480 | Msa1002050 | 0.804453 | 2.145141e-49 | -8.615850e-47 |
| Msa0079720 | Msa1002050 | 0.808081 | 3.689724e-50 | -8.615850e-47 |
| Msa0081900 | Msa1002050 | 0.804808 | 1.808585e-49 | -8.615850e-47 |
| Msa0083090 | Msa1002050 | 0.821631 | 3.643305e-53 | -8.615850e-47 |
| Msa0605190 | Msa1002050 | 0.816389 | 5.671312e-52 | -8.615850e-47 |
| Msa0610670 | Msa1002050 | 0.809445 | 1.885365e-50 | -8.615850e-47 |
| Msa0649730 | Msa1002050 | 0.831636 | 1.492330e-55 | -8.615850e-47 |
| Msa0662550 | Msa1002050 | 0.808207 | 3.469773e-50 | -8.615850e-47 |
| Msa0691340 | Msa1002050 | 0.804955 | 1.684781e-49 | -8.615850e-47 |
| Msa0763890 | Msa1002050 | 0.806033 | 1.001303e-49 | -8.615850e-47 |
| Msa0763920 | Msa1002050 | 0.814305 | 1.648394e-51 | -8.615850e-47 |
| Msa0796300 | Msa1002050 | 0.807737 | 4.366471e-50 | -8.615850e-47 |
| Msa0808100 | Msa1002050 | 0.818874 | 1.560766e-52 | -8.615850e-47 |
| Msa0832090 | Msa1002050 | 0.814594 | 1.423206e-51 | -8.615850e-47 |
| Msa0143850 | Msa1002050 | 0.817532 | 3.140571e-52 | -8.615850e-47 |
| Msa0171200 | Msa1002050 | 0.811301 | 7.496458e-51 | -8.615850e-47 |
| Msa0175420 | Msa1002050 | 0.806459 | 8.142542e-50 | -8.615850e-47 |
| Msa0198300 | Msa1002050 | 0.809111 | 2.223816e-50 | -8.615850e-47 |
| Msa0236420 | Msa1002050 | 0.800343 | 1.507062e-48 | -8.615850e-47 |
| Msa0377440 | Msa1002050 | 0.810736 | 9.936629e-51 | -8.615850e-47 |
| Msa0380460 | Msa1002050 | 0.802730 | 4.884869e-49 | -8.615850e-47 |
| Msa0380480 | Msa1002050 | 0.805782 | 1.130466e-49 | -8.615850e-47 |
| Msa0395480 | Msa1002050 | 0.804387 | 2.213471e-49 | -8.615850e-47 |
| Msa0423840 | Msa1002050 | 0.804094 | 2.547274e-49 | -8.615850e-47 |
| Msa0992580 | Msa1002050 | 0.801342 | 9.420316e-49 | -8.615850e-47 |
| Msa0992600 | Msa1002050 | 0.812711 | 3.694615e-51 | -8.615850e-47 |
| Msa1002050 | Msa1065430 | 0.800591 | 1.341060e-48 | -8.615850e-47 |
| Msa1002050 | Msa1161810 | 0.810110 | 1.356790e-50 | -8.615850e-47 |
| Msa1002050 | Msa1333730 | 0.823375 | 1.432888e-53 | -8.615850e-47 |
| Msa1002050 | Msa1401460 | 0.829181 | 5.941524e-55 | -8.615850e-47 |
| Msa1002050 | Msa1426710 | 0.815295 | 9.945939e-52 | -8.615850e-47 |
| Msa0245860 | Msa1002050 | 0.833490 | 5.175461e-56 | -8.615850e-47 |
| Msa0280150 | Msa1002050 | 0.823264 | 1.521430e-53 | -8.615850e-47 |
| Msa0305330 | Msa1002050 | 0.821660 | 3.588267e-53 | -8.615850e-47 |
| Msa0320800 | Msa1002050 | 0.811325 | 7.407342e-51 | -8.615850e-47 |
| Msa0510990 | Msa1002050 | 0.803730 | 3.031921e-49 | -8.615850e-47 |
| Msa0517650 | Msa1002050 | 0.827968 | 1.166617e-54 | -8.615850e-47 |
| Msa0559500 | Msa1002050 | 0.801892 | 7.267590e-49 | -8.615850e-47 |
| Msa0576380 | Msa1002050 | 0.806049 | 9.932703e-50 | -8.615850e-47 |
| Msa0579200 | Msa1002050 | 0.815786 | 7.732169e-52 | -8.615850e-47 |
| Msa0582180 | Msa1002050 | 0.804924 | 1.710511e-49 | -8.615850e-47 |
| Msa0844110 | Msa1002050 | 0.804015 | 2.645932e-49 | -8.615850e-47 |
| Msa0868160 | Msa1002050 | 0.807882 | 4.067617e-50 | -8.615850e-47 |
| Msa0899970 | Msa1002050 | 0.817825 | 2.697124e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002050 | MtrunA17_Chr6g0475301 | 94.444 | 342 | 13 | 2 | 1 | 340 | 1 | 338 | 0.0 | 614 |
| Msa1002050 | MtrunA17_Chr8g0389231 | 68.000 | 300 | 86 | 5 | 45 | 340 | 51 | 344 | 5.34e-126 | 373 |
| Msa1002050 | MtrunA17_Chr1g0151641 | 59.937 | 317 | 101 | 7 | 37 | 341 | 84 | 386 | 6.67e-116 | 348 |
| Msa1002050 | MtrunA17_Chr8g0349591 | 38.514 | 148 | 87 | 3 | 185 | 329 | 595 | 741 | 1.67e-20 | 92.8 |
| Msa1002050 | MtrunA17_Chr7g0247081 | 35.503 | 169 | 103 | 4 | 166 | 329 | 589 | 756 | 7.18e-20 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002050 | AT5G51710.2 | 80.635 | 315 | 58 | 2 | 29 | 341 | 21 | 334 | 3.64e-180 | 511 |
| Msa1002050 | AT5G51710.1 | 80.635 | 315 | 58 | 2 | 29 | 341 | 21 | 334 | 3.85e-180 | 511 |
| Msa1002050 | AT5G11800.1 | 67.119 | 295 | 89 | 4 | 50 | 341 | 68 | 357 | 3.45e-130 | 385 |
| Msa1002050 | AT2G19600.1 | 60.458 | 349 | 114 | 8 | 6 | 340 | 10 | 348 | 4.84e-130 | 384 |
| Msa1002050 | AT1G01790.1 | 32.159 | 227 | 144 | 6 | 112 | 329 | 533 | 758 | 1.50e-20 | 93.6 |
| Msa1002050 | AT1G01790.2 | 32.159 | 227 | 144 | 6 | 112 | 329 | 533 | 758 | 1.50e-20 | 93.6 |
| Msa1002050 | AT4G00630.2 | 37.838 | 148 | 88 | 3 | 185 | 329 | 592 | 738 | 3.08e-20 | 92.4 |
| Msa1002050 | AT4G00630.1 | 37.838 | 148 | 88 | 3 | 185 | 329 | 592 | 738 | 3.53e-20 | 92.4 |
Find 70 sgRNAs with CRISPR-Local
Find 611 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTGAAGCACGGGATATT+TGG | 0.149594 | 6_4:-86703566 | None:intergenic |
| CTTCTTGCAGGCTCCCTTAT+TGG | 0.156333 | 6_4:+86704931 | Msa1002050:CDS |
| GTTGAGACGGTCGCACAATT+TGG | 0.261467 | 6_4:+86705475 | Msa1002050:CDS |
| TGAATCTAATGATGGTTCTT+TGG | 0.279038 | 6_4:+86697782 | Msa1002050:CDS |
| ATTGTGGGCTATCTTCTTGC+AGG | 0.281597 | 6_4:+86704919 | Msa1002050:CDS |
| TTGAGACGGTCGCACAATTT+GGG | 0.314334 | 6_4:+86705476 | Msa1002050:CDS |
| AATGGAGTGCCTTTGGATTA+TGG | 0.323743 | 6_4:+86697652 | Msa1002050:CDS |
| ATTTGCTTTGCTCCCTGTCT+TGG | 0.333252 | 6_4:+86706226 | Msa1002050:CDS |
| CCTATCACGAGTTTCTTTAT+CGG | 0.333568 | 6_4:-86697727 | None:intergenic |
| GGGGCCTGTTGCTGTTCTGC+TGG | 0.342219 | 6_4:+86705685 | Msa1002050:CDS |
| GACAACCTTGATTGACAAAA+AGG | 0.346624 | 6_4:+86703406 | Msa1002050:CDS |
| TTTACAAGGGATTATTTCAA+TGG | 0.365914 | 6_4:+86706265 | Msa1002050:CDS |
| AAGGCACTCCATTTCTTCTT+CGG | 0.369996 | 6_4:-86697642 | None:intergenic |
| GTTCATTAGTGAAATGGTTC+AGG | 0.378502 | 6_4:+86704969 | Msa1002050:CDS |
| CCGTGCTTCAAGTTGATTTG+AGG | 0.379621 | 6_4:+86703575 | Msa1002050:CDS |
| TGTGCTAGGGTTTGTTCATC+TGG | 0.379914 | 6_4:+86697699 | Msa1002050:CDS |
| GTGCAGGCTAATATCAGATT+TGG | 0.388173 | 6_4:+86704674 | Msa1002050:intron |
| TTTGCTTTGCTCCCTGTCTT+GGG | 0.393726 | 6_4:+86706227 | Msa1002050:CDS |
| GCTTCAAGACGTGTTCTCTC+TGG | 0.394209 | 6_4:+86703361 | Msa1002050:CDS |
| TTATTACATGTAGGTTATTG+TGG | 0.398507 | 6_4:+86704903 | Msa1002050:intron |
| CAATGGCACCGAAGAAGAAA+TGG | 0.399708 | 6_4:+86697634 | None:intergenic |
| TTTGAAGTTCATTAGTGAAA+TGG | 0.399813 | 6_4:+86704963 | Msa1002050:CDS |
| AAGAAGAAATGGAGTGCCTT+TGG | 0.402279 | 6_4:+86697645 | Msa1002050:CDS |
| CCCTCCAGCAGAACAGCAAC+AGG | 0.407907 | 6_4:-86705689 | None:intergenic |
| CTTCATGTTCAAGTTACAAT+TGG | 0.410706 | 6_4:+86706053 | Msa1002050:CDS |
| GTAATATTCATGTTCCTTTG+CGG | 0.421012 | 6_4:+86705724 | Msa1002050:CDS |
| GCAGGCTCCCTTATTGGACC+AGG | 0.438323 | 6_4:+86704937 | Msa1002050:CDS |
| TATTACATGTAGGTTATTGT+GGG | 0.443232 | 6_4:+86704904 | Msa1002050:intron |
| TATTCTGTTGCAGGGAGTAT+TGG | 0.452462 | 6_4:+86703149 | Msa1002050:intron |
| GCCTGTTGCTGTTCTGCTGG+AGG | 0.452854 | 6_4:+86705688 | Msa1002050:CDS |
| CCGATAAAGAAACTCGTGAT+AGG | 0.455027 | 6_4:+86697727 | Msa1002050:CDS |
| CCTGTTGCTGTTCTGCTGGA+GGG | 0.464259 | 6_4:+86705689 | Msa1002050:CDS |
| ATCGTTTCTGCAGCCATTGG+TGG | 0.467942 | 6_4:+86704705 | Msa1002050:CDS |
| TTACAAGGGATTATTTCAAT+GGG | 0.474466 | 6_4:+86706266 | Msa1002050:CDS |
| TGATCGTGATCTGTTGTGCT+AGG | 0.481837 | 6_4:+86697685 | Msa1002050:CDS |
| AAAGAACCATCATTAGATTC+AGG | 0.485762 | 6_4:-86697780 | None:intergenic |
| CCACTGTTACCACCCAAGAC+AGG | 0.497556 | 6_4:-86706239 | None:intergenic |
| TAGCACTGTGGCTGATCAGC+AGG | 0.498448 | 6_4:+86702443 | Msa1002050:CDS |
| CAGGCTCCCTTATTGGACCA+GGG | 0.504745 | 6_4:+86704938 | Msa1002050:CDS |
| ATCATCGTTTCTGCAGCCAT+TGG | 0.516008 | 6_4:+86704702 | Msa1002050:CDS |
| AAATTTGCTTTGCAGTTATG+TGG | 0.518831 | 6_4:+86705829 | Msa1002050:intron |
| CTCAAATCAACTTGAAGCAC+GGG | 0.526490 | 6_4:-86703574 | None:intergenic |
| ACTGCTCCTGAATCTAATGA+TGG | 0.534051 | 6_4:+86697774 | Msa1002050:CDS |
| TCTGAAAATGATCAACCTGA+AGG | 0.538308 | 6_4:+86697840 | Msa1002050:CDS |
| GGCTCCCTTATTGGACCAGG+GGG | 0.538524 | 6_4:+86704940 | Msa1002050:CDS |
| CCTTTGCGGAATTCTTGCCA+TGG | 0.554570 | 6_4:+86705738 | Msa1002050:CDS |
| AGGCTCCCTTATTGGACCAG+GGG | 0.564639 | 6_4:+86704939 | Msa1002050:CDS |
| AGAAAAGACGATTCCACCAA+TGG | 0.571482 | 6_4:-86704718 | None:intergenic |
| CAGGCTAATATCAGATTTGG+TGG | 0.572179 | 6_4:+86704677 | Msa1002050:intron |
| TGAGACGGTCGCACAATTTG+GGG | 0.577831 | 6_4:+86705477 | Msa1002050:CDS |
| GCTTTGCTCCCTGTCTTGGG+TGG | 0.579228 | 6_4:+86706230 | Msa1002050:CDS |
| CCTCAAATCAACTTGAAGCA+CGG | 0.582244 | 6_4:-86703575 | None:intergenic |
| CACTGTTACCACCCAAGACA+GGG | 0.583689 | 6_4:-86706238 | None:intergenic |
| TTATATCAGGACTGTGCAGT+GGG | 0.584874 | 6_4:+86706197 | Msa1002050:intron |
| TTTGCTTTGCAGTTATGTGG+AGG | 0.587775 | 6_4:+86705832 | Msa1002050:intron |
| CCTGTCTTGGGTGGTAACAG+TGG | 0.589302 | 6_4:+86706239 | Msa1002050:CDS |
| TTTATATCAGGACTGTGCAG+TGG | 0.591300 | 6_4:+86706196 | Msa1002050:intron |
| GATCGTGATCTGTTGTGCTA+GGG | 0.592089 | 6_4:+86697686 | Msa1002050:CDS |
| CGTGTTCTCTCTGGAAAACG+AGG | 0.618046 | 6_4:+86703370 | Msa1002050:CDS |
| GTCAATGTCATCAACAGCAG+TGG | 0.630563 | 6_4:+86705891 | Msa1002050:CDS |
| CAGGAATACAAACCTTGCCA+AGG | 0.634383 | 6_4:-86705536 | None:intergenic |
| TAAGAGAAATGATACGCGTG+AGG | 0.641750 | 6_4:+86703203 | Msa1002050:CDS |
| TGTTGATGACATTGACAGAA+AGG | 0.642047 | 6_4:-86705884 | None:intergenic |
| AAGAGAAATGATACGCGTGA+GGG | 0.664369 | 6_4:+86703204 | Msa1002050:CDS |
| TGTGGAGGAAAATTGTCTGA+GGG | 0.672358 | 6_4:+86705847 | Msa1002050:CDS |
| CCATGGCAAGAATTCCGCAA+AGG | 0.673003 | 6_4:-86705738 | None:intergenic |
| ATGTGGAGGAAAATTGTCTG+AGG | 0.673153 | 6_4:+86705846 | Msa1002050:CDS |
| GCAACAACACCATAATCCAA+AGG | 0.679526 | 6_4:-86697661 | None:intergenic |
| CCATCTAGTTAAAAGCTGTG+GGG | 0.724416 | 6_4:+86705666 | Msa1002050:intron |
| AAACAGCTTCAATAGCACTG+TGG | 0.754157 | 6_4:+86702431 | Msa1002050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTGATTTTGTATTTT+TGG | + | chr6_4:86697881-86697900 | Msa1002050:intron | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | + | chr6_4:86698181-86698200 | Msa1002050:intron | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | + | chr6_4:86698181-86698200 | Msa1002050:intron | 10.0% |
| !! | TATAATAAACAATCAATTTA+GGG | + | chr6_4:86699649-86699668 | Msa1002050:intron | 10.0% |
| !! | TATTATATTTACATAGTTTA+GGG | - | chr6_4:86700152-86700171 | None:intergenic | 10.0% |
| !!! | ATCTTTATTTAAAAATAGAA+AGG | - | chr6_4:86702098-86702117 | None:intergenic | 10.0% |
| !! | TACAATAACTATTATATAAA+GGG | - | chr6_4:86702206-86702225 | None:intergenic | 10.0% |
| !!! | TATGTTTGTTATATTTAATT+TGG | + | chr6_4:86702363-86702382 | Msa1002050:intron | 10.0% |
| !! | AATAATAATAAAACAAAACA+AGG | + | chr6_4:86702966-86702985 | Msa1002050:intron | 10.0% |
| !! | ATAATAATAAAACAAAACAA+GGG | + | chr6_4:86702967-86702986 | Msa1002050:intron | 10.0% |
| !! | AAATGCATATATAATAAATT+TGG | - | chr6_4:86704547-86704566 | None:intergenic | 10.0% |
| !!! | TATTTTATATTTAAGGTAAT+GGG | - | chr6_4:86705928-86705947 | None:intergenic | 10.0% |
| !!! | ATATTTTATATTTAAGGTAA+TGG | - | chr6_4:86705929-86705948 | None:intergenic | 10.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | + | chr6_4:86698180-86698199 | Msa1002050:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | + | chr6_4:86698182-86698201 | Msa1002050:intron | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | + | chr6_4:86698293-86698312 | Msa1002050:intron | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | + | chr6_4:86698294-86698313 | Msa1002050:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | - | chr6_4:86698325-86698344 | None:intergenic | 15.0% |
| !!! | TATTTTTGAGAAAAAAATAC+AGG | - | chr6_4:86698962-86698981 | None:intergenic | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | + | chr6_4:86698180-86698199 | Msa1002050:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | + | chr6_4:86698182-86698201 | Msa1002050:intron | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | + | chr6_4:86698293-86698312 | Msa1002050:intron | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | + | chr6_4:86698294-86698313 | Msa1002050:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | - | chr6_4:86698325-86698344 | None:intergenic | 15.0% |
| !! | GTATAATAAACAATCAATTT+AGG | + | chr6_4:86699648-86699667 | Msa1002050:intron | 15.0% |
| !!! | TGTTTTTATAAGCTATAAAT+GGG | - | chr6_4:86699932-86699951 | None:intergenic | 15.0% |
| !!! | TTGTTTTTATAAGCTATAAA+TGG | - | chr6_4:86699933-86699952 | None:intergenic | 15.0% |
| !! | CTATTATATTTACATAGTTT+AGG | - | chr6_4:86700153-86700172 | None:intergenic | 15.0% |
| !! | CTAAACTATGTAAATATAAT+AGG | + | chr6_4:86700151-86700170 | Msa1002050:intron | 15.0% |
| !! | ATTTGTGTTCTTAAAATTAA+GGG | + | chr6_4:86700887-86700906 | Msa1002050:intron | 15.0% |
| !!! | TTTTTGTTTTTTGTTTTGTT+TGG | + | chr6_4:86700986-86701005 | Msa1002050:intron | 15.0% |
| !! | TTTATTGTTAAATGAGAAAA+TGG | + | chr6_4:86701059-86701078 | Msa1002050:intron | 15.0% |
| !!! | TTTTTGTTTATATTTAAGAC+TGG | + | chr6_4:86701297-86701316 | Msa1002050:intron | 15.0% |
| !! | GTACAATAACTATTATATAA+AGG | - | chr6_4:86702207-86702226 | None:intergenic | 15.0% |
| !! | AGAAATTATAATGTTATTGT+AGG | + | chr6_4:86702800-86702819 | Msa1002050:intron | 15.0% |
| !! | GAAATTATAATGTTATTGTA+GGG | + | chr6_4:86702801-86702820 | Msa1002050:intron | 15.0% |
| !! | AGCTAATTATTAGTATAAAT+AGG | - | chr6_4:86702919-86702938 | None:intergenic | 15.0% |
| !!! | TATTCTCATATTTTTTTAAG+AGG | + | chr6_4:86703104-86703123 | Msa1002050:intron | 15.0% |
| !!! | AATAGTTTTCTTTAATTTCT+AGG | + | chr6_4:86704474-86704493 | Msa1002050:intron | 15.0% |
| !! | ATATAATAAATTTGGCAAAA+AGG | - | chr6_4:86704539-86704558 | None:intergenic | 15.0% |
| !! | AAAAAAATGATACGAAAAAA+TGG | - | chr6_4:86705450-86705469 | None:intergenic | 15.0% |
| !! | TTCATATTAAAAAATGGAAA+TGG | - | chr6_4:86705627-86705646 | None:intergenic | 15.0% |
| !! | AACAGATTCATATTAAAAAA+TGG | - | chr6_4:86705633-86705652 | None:intergenic | 15.0% |
| !!! | ATTTTATATTTAAGGTAATG+GGG | - | chr6_4:86705927-86705946 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTTGGTTTTGTT+TGG | + | chr6_4:86697891-86697910 | Msa1002050:intron | 20.0% |
| !!! | TTGTATTTTTGGTTTTGTTT+GGG | + | chr6_4:86697892-86697911 | Msa1002050:intron | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | + | chr6_4:86698154-86698173 | Msa1002050:intron | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | + | chr6_4:86698155-86698174 | Msa1002050:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | - | chr6_4:86698326-86698345 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | + | chr6_4:86698327-86698346 | Msa1002050:intron | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | + | chr6_4:86698154-86698173 | Msa1002050:intron | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | + | chr6_4:86698155-86698174 | Msa1002050:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | - | chr6_4:86698326-86698345 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | + | chr6_4:86698327-86698346 | Msa1002050:intron | 20.0% |
| !!! | ATTTTTCTAATTTTGCGTTT+TGG | + | chr6_4:86699527-86699546 | Msa1002050:intron | 20.0% |
| !! | AAACTATAAGAGAAACTATT+AGG | + | chr6_4:86700219-86700238 | Msa1002050:intron | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | - | chr6_4:86700271-86700290 | None:intergenic | 20.0% |
| !!! | CCTGAACTATATATTTTTTA+GGG | - | chr6_4:86700485-86700504 | None:intergenic | 20.0% |
| !! | CCTAAAAAATATATAGTTCA+GGG | + | chr6_4:86700483-86700502 | Msa1002050:intron | 20.0% |
| !!! | TTATCCTTTTTTGTTTTGTT+TGG | + | chr6_4:86700537-86700556 | Msa1002050:intron | 20.0% |
| !! | AAAACCAAACAAAACAAAAA+AGG | - | chr6_4:86700544-86700563 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTTGTTTGGTTT+TGG | + | chr6_4:86700543-86700562 | Msa1002050:intron | 20.0% |
| !! | GATTTGTGTTCTTAAAATTA+AGG | + | chr6_4:86700886-86700905 | Msa1002050:intron | 20.0% |
| !! | TTAATGTTTGAGCAAATTAA+TGG | + | chr6_4:86700952-86700971 | Msa1002050:intron | 20.0% |
| !!! | TTTTGAGACTATAGTTTTAT+AGG | + | chr6_4:86701011-86701030 | Msa1002050:intron | 20.0% |
| !!! | TTTGAGACTATAGTTTTATA+GGG | + | chr6_4:86701012-86701031 | Msa1002050:intron | 20.0% |
| !! | TTATTATACTTAACACAAGA+TGG | - | chr6_4:86701248-86701267 | None:intergenic | 20.0% |
| !! | ACATGAAATACTAGATATAA+GGG | + | chr6_4:86701686-86701705 | Msa1002050:intron | 20.0% |
| !!! | ATTTTGTTTCTTATCTTTCT+TGG | + | chr6_4:86701863-86701882 | Msa1002050:intron | 20.0% |
| !!! | TTTTGTTTCTTATCTTTCTT+GGG | + | chr6_4:86701864-86701883 | Msa1002050:intron | 20.0% |
| !! | TATTTAAAAATAGAAAGGCA+TGG | - | chr6_4:86702093-86702112 | None:intergenic | 20.0% |
| !! | TATATGAATTTCAAATTGAC+AGG | - | chr6_4:86702487-86702506 | None:intergenic | 20.0% |
| !! | AAGGGACAAATAATAAAATA+AGG | + | chr6_4:86702985-86703004 | Msa1002050:intron | 20.0% |
| !!! | TAAATAATTATTTTCCTCAG+TGG | + | chr6_4:86703323-86703342 | Msa1002050:intron | 20.0% |
| !! | ATGTAACAACTCTAATTTAA+GGG | - | chr6_4:86703916-86703935 | None:intergenic | 20.0% |
| !! | TATGTAACAACTCTAATTTA+AGG | - | chr6_4:86703917-86703936 | None:intergenic | 20.0% |
| !! | TTAAATTAGAGTTGTTACAT+AGG | + | chr6_4:86703916-86703935 | Msa1002050:intron | 20.0% |
| !!! | TTCTTTTTGTGTTTTTTTTC+TGG | + | chr6_4:86704091-86704110 | Msa1002050:intron | 20.0% |
| !! | TTTCATGAATCTATATTTCT+GGG | + | chr6_4:86704337-86704356 | Msa1002050:intron | 20.0% |
| !! | AAGAAAAATAAAGAGAAACA+CGG | - | chr6_4:86704422-86704441 | None:intergenic | 20.0% |
| !!! | CTTTTCTTTTTATTACATGT+AGG | + | chr6_4:86704894-86704913 | Msa1002050:intron | 20.0% |
| !! | ACAAAATTTACAGAAGAAAT+TGG | - | chr6_4:86705066-86705085 | None:intergenic | 20.0% |
| !!! | AATTTCTTCTGTAAATTTTG+TGG | + | chr6_4:86705065-86705084 | Msa1002050:intron | 20.0% |
| !!! | TTTTCATATAGAACAATTTC+TGG | + | chr6_4:86705304-86705323 | Msa1002050:intron | 20.0% |
| !! | ATCAAGAATAATATTTCCAT+TGG | + | chr6_4:86705363-86705382 | Msa1002050:intron | 20.0% |
| !! | TCAAGAATAATATTTCCATT+GGG | + | chr6_4:86705364-86705383 | Msa1002050:intron | 20.0% |
| !!! | TTTCGTATCATTTTTTTTAC+AGG | + | chr6_4:86705453-86705472 | Msa1002050:intron | 20.0% |
| !!! | TGTAGTAGATACTAAATTTT+TGG | + | chr6_4:86705806-86705825 | Msa1002050:intron | 20.0% |
| !!! | AGAAAATAATGAATCAGTTT+TGG | - | chr6_4:86705979-86705998 | None:intergenic | 20.0% |
| ! | AAAAGAAAAATCAAACCTTC+AGG | - | chr6_4:86697858-86697877 | None:intergenic | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | + | chr6_4:86698110-86698129 | Msa1002050:intron | 25.0% |
| !!! | ATTTATTTGGCGTTTTAAAC+CGG | + | chr6_4:86698608-86698627 | Msa1002050:intron | 25.0% |
| ! | TTGCAATAAAGAAATGAGTA+TGG | + | chr6_4:86698890-86698909 | Msa1002050:intron | 25.0% |
| ! | TGCAATAAAGAAATGAGTAT+GGG | + | chr6_4:86698891-86698910 | Msa1002050:intron | 25.0% |
| !! | TGTCATTATACTTCAAGTTA+TGG | + | chr6_4:86699039-86699058 | Msa1002050:intron | 25.0% |
| !! | GTCATTATACTTCAAGTTAT+GGG | + | chr6_4:86699040-86699059 | Msa1002050:intron | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | + | chr6_4:86698110-86698129 | Msa1002050:intron | 25.0% |
| ! | AAGTGAGATAATAGCTTAAT+TGG | + | chr6_4:86699493-86699512 | Msa1002050:intron | 25.0% |
| !!! | TTTTGAGATCATAGTTTCAT+TGG | + | chr6_4:86699562-86699581 | Msa1002050:intron | 25.0% |
| !! | TTTGAGATCATAGTTTCATT+GGG | + | chr6_4:86699563-86699582 | Msa1002050:intron | 25.0% |
| !! | ATGAAAATGTTTTCATGCAA+TGG | + | chr6_4:86699619-86699638 | Msa1002050:intron | 25.0% |
| ! | TCAAATAAGCTAATCCAAAT+AGG | - | chr6_4:86699675-86699694 | None:intergenic | 25.0% |
| !! | CTCTAGGAATATATATTTCA+TGG | - | chr6_4:86700181-86700200 | None:intergenic | 25.0% |
| ! | CATGAAATATATATTCCTAG+AGG | + | chr6_4:86700179-86700198 | Msa1002050:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr6_4:86700215-86700234 | None:intergenic | 25.0% |
| ! | TAATGAGTTTGACCAAAATA+TGG | + | chr6_4:86700256-86700275 | Msa1002050:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr6_4:86700276-86700295 | Msa1002050:intron | 25.0% |
| ! | CTTAATAGCAAAGACAAAAT+TGG | - | chr6_4:86700387-86700406 | None:intergenic | 25.0% |
| !!! | TCTTTGCTATTAAGATGTTA+GGG | + | chr6_4:86700393-86700412 | Msa1002050:intron | 25.0% |
| !!! | TGATGAGTTTTATGTAGTTT+AGG | + | chr6_4:86700454-86700473 | Msa1002050:intron | 25.0% |
| !!! | GATGAGTTTTATGTAGTTTA+GGG | + | chr6_4:86700455-86700474 | Msa1002050:intron | 25.0% |
| ! | CCCTAAAAAATATATAGTTC+AGG | + | chr6_4:86700482-86700501 | Msa1002050:intron | 25.0% |
| !!! | CCCTGAACTATATATTTTTT+AGG | - | chr6_4:86700486-86700505 | None:intergenic | 25.0% |
| !!! | TTATTGCGATATTTTTGTTC+TGG | + | chr6_4:86700606-86700625 | Msa1002050:intron | 25.0% |
| !!! | TATTGCGATATTTTTGTTCT+GGG | + | chr6_4:86700607-86700626 | Msa1002050:intron | 25.0% |
| ! | GTTTAAGAAACTGGAAAAAA+TGG | + | chr6_4:86700757-86700776 | Msa1002050:intron | 25.0% |
| !!! | AATTAAGGGTGTTAAATTGA+AGG | + | chr6_4:86700901-86700920 | Msa1002050:intron | 25.0% |
| !! | TTTTATAGGGTAGTAAAGTT+TGG | + | chr6_4:86701025-86701044 | Msa1002050:intron | 25.0% |
| ! | TTTATAGGGTAGTAAAGTTT+GGG | + | chr6_4:86701026-86701045 | Msa1002050:intron | 25.0% |
| ! | TAGTTGAATTGAATATGCAA+TGG | + | chr6_4:86701136-86701155 | Msa1002050:intron | 25.0% |
| ! | ATTGAATATGCAATGGTAAA+TGG | + | chr6_4:86701143-86701162 | Msa1002050:intron | 25.0% |
| ! | TTGAATATGCAATGGTAAAT+GGG | + | chr6_4:86701144-86701163 | Msa1002050:intron | 25.0% |
| ! | ATAGACTACAAAACTAACTT+GGG | - | chr6_4:86701537-86701556 | None:intergenic | 25.0% |
| ! | AATAGACTACAAAACTAACT+TGG | - | chr6_4:86701538-86701557 | None:intergenic | 25.0% |
| ! | TGCTAACTCAAATGATTAAT+TGG | - | chr6_4:86701594-86701613 | None:intergenic | 25.0% |
| ! | TATATCTAGTATTTCATGTG+AGG | - | chr6_4:86701685-86701704 | None:intergenic | 25.0% |
| ! | CACATGAAATACTAGATATA+AGG | + | chr6_4:86701685-86701704 | Msa1002050:intron | 25.0% |
| ! | GAAAGATAAGAAACAAAATG+AGG | - | chr6_4:86701862-86701881 | None:intergenic | 25.0% |
| ! | AGGGAAATGTTATATAGATA+AGG | - | chr6_4:86702187-86702206 | None:intergenic | 25.0% |
| ! | AAATGAACCAAATTTGTGTT+TGG | + | chr6_4:86702516-86702535 | Msa1002050:intron | 25.0% |
| ! | AATGAACCAAATTTGTGTTT+GGG | + | chr6_4:86702517-86702536 | Msa1002050:intron | 25.0% |
| ! | TGATTCTTTAATTGAAGAAC+AGG | - | chr6_4:86702596-86702615 | None:intergenic | 25.0% |
| ! | ATAAGTAGCTCAAAAAACAT+TGG | - | chr6_4:86702711-86702730 | None:intergenic | 25.0% |
| ! | TTAGTATAAATAGGACTACT+GGG | - | chr6_4:86702910-86702929 | None:intergenic | 25.0% |
| ! | ATTAGTATAAATAGGACTAC+TGG | - | chr6_4:86702911-86702930 | None:intergenic | 25.0% |
| ! | AAGAAATTACAGCAAACATA+TGG | - | chr6_4:86703239-86703258 | None:intergenic | 25.0% |
| !!! | ATATGTTTGCTGTAATTTCT+TGG | + | chr6_4:86703238-86703257 | Msa1002050:intron | 25.0% |
| ! | TTCTTGGTTACTTCTTATAA+TGG | + | chr6_4:86703254-86703273 | Msa1002050:intron | 25.0% |
| ! | TACTTATATATGCTATTGCT+TGG | + | chr6_4:86703509-86703528 | Msa1002050:intron | 25.0% |
| !!! | AAGGGTATTTCTATACTTTA+CGG | - | chr6_4:86703898-86703917 | None:intergenic | 25.0% |
| !! | AAAAGATAAAAGCACAAACA+GGG | - | chr6_4:86704216-86704235 | None:intergenic | 25.0% |
| !! | AAAAAGATAAAAGCACAAAC+AGG | - | chr6_4:86704217-86704236 | None:intergenic | 25.0% |
| ! | TTGCCCAAATAATTCAAATA+TGG | + | chr6_4:86704235-86704254 | Msa1002050:intron | 25.0% |
| ! | GGTCCATATTTGAATTATTT+GGG | - | chr6_4:86704241-86704260 | None:intergenic | 25.0% |
| ! | TGGTCCATATTTGAATTATT+TGG | - | chr6_4:86704242-86704261 | None:intergenic | 25.0% |
| ! | GTTTCATGAATCTATATTTC+TGG | + | chr6_4:86704336-86704355 | Msa1002050:intron | 25.0% |
| !!! | TTTCTTTTTTGTTCTTCAGT+TGG | + | chr6_4:86704436-86704455 | Msa1002050:intron | 25.0% |
| ! | TTATTACATGTAGGTTATTG+TGG | + | chr6_4:86704903-86704922 | Msa1002050:intron | 25.0% |
| ! | TATTACATGTAGGTTATTGT+GGG | + | chr6_4:86704904-86704923 | Msa1002050:intron | 25.0% |
| !! | TTTGAAGTTCATTAGTGAAA+TGG | + | chr6_4:86704963-86704982 | Msa1002050:CDS | 25.0% |
| ! | TAATTATTGCATCATGTAAC+TGG | + | chr6_4:86705279-86705298 | Msa1002050:intron | 25.0% |
| !!! | ATTTTTTTTACAGGTTGAGA+CGG | + | chr6_4:86705462-86705481 | Msa1002050:intron | 25.0% |
| !!! | AGTATTTCTTTTGTTTGCTT+TGG | + | chr6_4:86705501-86705520 | Msa1002050:CDS | 25.0% |
| !!! | GTATTTCTTTTGTTTGCTTT+GGG | + | chr6_4:86705502-86705521 | Msa1002050:CDS | 25.0% |
| !!! | TATTTCTTTTGTTTGCTTTG+GGG | + | chr6_4:86705503-86705522 | Msa1002050:CDS | 25.0% |
| !! | TGAAACAGTAAAAGAAGTTT+TGG | - | chr6_4:86705567-86705586 | None:intergenic | 25.0% |
| ! | TTTACTGTTTCACATATTTG+TGG | + | chr6_4:86705575-86705594 | Msa1002050:intron | 25.0% |
| !! | ATTTTCTTTCACCTTTTTAC+AGG | + | chr6_4:86705992-86706011 | Msa1002050:intron | 25.0% |
| ! | AAGTGTAATATTCAACTCAA+CGG | - | chr6_4:86706104-86706123 | None:intergenic | 25.0% |
| ! | TTTACAAGGGATTATTTCAA+TGG | + | chr6_4:86706265-86706284 | Msa1002050:CDS | 25.0% |
| ! | TTACAAGGGATTATTTCAAT+GGG | + | chr6_4:86706266-86706285 | Msa1002050:CDS | 25.0% |
| AAAGAACCATCATTAGATTC+AGG | - | chr6_4:86697783-86697802 | None:intergenic | 30.0% | |
| TGAATCTAATGATGGTTCTT+TGG | + | chr6_4:86697782-86697801 | Msa1002050:CDS | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | - | chr6_4:86698281-86698300 | None:intergenic | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | - | chr6_4:86698282-86698301 | None:intergenic | 30.0% | |
| GCAATAAAGAAATGAGTATG+GGG | + | chr6_4:86698892-86698911 | Msa1002050:intron | 30.0% | |
| ACAAACAGAGTATATGATCA+AGG | + | chr6_4:86698987-86699006 | Msa1002050:intron | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | - | chr6_4:86698281-86698300 | None:intergenic | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | - | chr6_4:86698282-86698301 | None:intergenic | 30.0% | |
| !!! | TTTTGCGTTTTGGTTTTGTT+TGG | + | chr6_4:86699537-86699556 | Msa1002050:intron | 30.0% |
| GCTTATTTGAGCTTATCTTA+TGG | + | chr6_4:86699685-86699704 | Msa1002050:intron | 30.0% | |
| ACAATACAACATACACCAAA+TGG | + | chr6_4:86699855-86699874 | Msa1002050:intron | 30.0% | |
| !! | GTCTTTGCTATTAAGATGTT+AGG | + | chr6_4:86700392-86700411 | Msa1002050:intron | 30.0% |
| TTTGGAGATGACAATTTCAT+AGG | + | chr6_4:86700561-86700580 | Msa1002050:intron | 30.0% | |
| TTGGAGATGACAATTTCATA+GGG | + | chr6_4:86700562-86700581 | Msa1002050:intron | 30.0% | |
| TTGTTGGATTGAATATGCAT+TGG | + | chr6_4:86700648-86700667 | Msa1002050:intron | 30.0% | |
| ! | AGTTTGAGTTCTTGATATTG+AGG | + | chr6_4:86701420-86701439 | Msa1002050:intron | 30.0% |
| !!! | TATTGAGGTTTTAAAGTGCA+AGG | + | chr6_4:86701435-86701454 | Msa1002050:intron | 30.0% |
| AGTTGTGTATGTGCTTAATT+AGG | + | chr6_4:86701509-86701528 | Msa1002050:intron | 30.0% | |
| TGTAGCTCGATTTATATAGA+TGG | + | chr6_4:86701719-86701738 | Msa1002050:intron | 30.0% | |
| GTAGCTCGATTTATATAGAT+GGG | + | chr6_4:86701720-86701739 | Msa1002050:intron | 30.0% | |
| ATATAGTTACTTCAAGAGCT+TGG | - | chr6_4:86701771-86701790 | None:intergenic | 30.0% | |
| AAACTATCAAGCAATGACAT+CGG | - | chr6_4:86701817-86701836 | None:intergenic | 30.0% | |
| CATGCATTGTATATTCATTG+GGG | - | chr6_4:86701900-86701919 | None:intergenic | 30.0% | |
| CCATGCATTGTATATTCATT+GGG | - | chr6_4:86701901-86701920 | None:intergenic | 30.0% | |
| CCAATGAATATACAATGCAT+GGG | + | chr6_4:86701899-86701918 | Msa1002050:intron | 30.0% | |
| ATATACAATGCATGGGAATT+AGG | + | chr6_4:86701906-86701925 | Msa1002050:intron | 30.0% | |
| CATGCATTGTATATTCATTG+GGG | - | chr6_4:86701900-86701919 | None:intergenic | 30.0% | |
| CCATGCATTGTATATTCATT+GGG | - | chr6_4:86701901-86701920 | None:intergenic | 30.0% | |
| CCAATGAATATACAATGCAT+GGG | + | chr6_4:86701899-86701918 | Msa1002050:intron | 30.0% | |
| ATATACAATGCATGGGAATT+AGG | + | chr6_4:86701906-86701925 | Msa1002050:intron | 30.0% | |
| TGCAAATTATGCACATTCTT+GGG | - | chr6_4:86702024-86702043 | None:intergenic | 30.0% | |
| ATGCAAATTATGCACATTCT+TGG | - | chr6_4:86702025-86702044 | None:intergenic | 30.0% | |
| ATTTGTAAGTGTACATGTCA+CGG | + | chr6_4:86702127-86702146 | Msa1002050:intron | 30.0% | |
| !!! | CTATTGAAGCTGTTTTTATC+AGG | - | chr6_4:86702426-86702445 | None:intergenic | 30.0% |
| ! | GATTAAGATTTGAGTTTGAG+GGG | - | chr6_4:86702556-86702575 | None:intergenic | 30.0% |
| ! | CGATTAAGATTTGAGTTTGA+GGG | - | chr6_4:86702557-86702576 | None:intergenic | 30.0% |
| ! | TCGATTAAGATTTGAGTTTG+AGG | - | chr6_4:86702558-86702577 | None:intergenic | 30.0% |
| !!! | CATCTTATTTTCTATTCCTC+TGG | + | chr6_4:86702663-86702682 | Msa1002050:intron | 30.0% |
| TTCTATTCCTCTGGTATATT+AGG | + | chr6_4:86702672-86702691 | Msa1002050:intron | 30.0% | |
| ! | ATCAAACTTTTGCCTATTGT+GGG | + | chr6_4:86702747-86702766 | Msa1002050:intron | 30.0% |
| TAATGTTATTGTAGGGAAAG+AGG | + | chr6_4:86702808-86702827 | Msa1002050:intron | 30.0% | |
| ! | AAAAGTGATTTGAAGCTTTC+AGG | + | chr6_4:86703436-86703455 | Msa1002050:intron | 30.0% |
| ! | AAAGTGATTTGAAGCTTTCA+GGG | + | chr6_4:86703437-86703456 | Msa1002050:intron | 30.0% |
| ! | CTATACTTTACGGTTATTTC+TGG | - | chr6_4:86703888-86703907 | None:intergenic | 30.0% |
| ! | AGTTGTTACATAGGCATTTT+AGG | + | chr6_4:86703925-86703944 | Msa1002050:intron | 30.0% |
| AGGACATTAAAATAGCAAGA+AGG | - | chr6_4:86704775-86704794 | None:intergenic | 30.0% | |
| ATTCAAAGACGAAAACAACT+AGG | - | chr6_4:86704795-86704814 | None:intergenic | 30.0% | |
| !!! | AAGTGATTCACTGTCATTTT+TGG | + | chr6_4:86705003-86705022 | Msa1002050:intron | 30.0% |
| ! | AAATTGATCAAAGCTTGCTT+CGG | - | chr6_4:86705029-86705048 | None:intergenic | 30.0% |
| TTTACAGAAGAAATTGGAGT+AGG | - | chr6_4:86705060-86705079 | None:intergenic | 30.0% | |
| ATGAGTTGTAATTATTGTCG+TGG | + | chr6_4:86705409-86705428 | Msa1002050:intron | 30.0% | |
| GTAATATTCATGTTCCTTTG+CGG | + | chr6_4:86705724-86705743 | Msa1002050:CDS | 30.0% | |
| ! | AAATTTGCTTTGCAGTTATG+TGG | + | chr6_4:86705829-86705848 | Msa1002050:intron | 30.0% |
| AAACTTTACCACCTGTAAAA+AGG | - | chr6_4:86706006-86706025 | None:intergenic | 30.0% | |
| ! | TTTACAGGTGGTAAAGTTTT+TGG | + | chr6_4:86706007-86706026 | Msa1002050:intron | 30.0% |
| ! | CTTCATGTTCAAGTTACAAT+TGG | + | chr6_4:86706053-86706072 | Msa1002050:CDS | 30.0% |
| !!! | AATTGGCACTCTTATTTTTC+AGG | + | chr6_4:86706070-86706089 | Msa1002050:CDS | 30.0% |
| AGTGTAATATTCAACTCAAC+GGG | - | chr6_4:86706103-86706122 | None:intergenic | 30.0% | |
| CCTATCACGAGTTTCTTTAT+CGG | - | chr6_4:86697730-86697749 | None:intergenic | 35.0% | |
| ! | GAAACTCGTGATAGGTTTTA+TGG | + | chr6_4:86697735-86697754 | Msa1002050:CDS | 35.0% |
| TCTGAAAATGATCAACCTGA+AGG | + | chr6_4:86697840-86697859 | Msa1002050:CDS | 35.0% | |
| ACTCTTTCAATCAGAAGTCT+CGG | - | chr6_4:86697981-86698000 | None:intergenic | 35.0% | |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | + | chr6_4:86698158-86698177 | Msa1002050:intron | 35.0% |
| AAGAATAAATAGGGGAGAGA+AGG | + | chr6_4:86698190-86698209 | Msa1002050:intron | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | + | chr6_4:86698191-86698210 | Msa1002050:intron | 35.0% | |
| ! | ATCAGTTGGTTTCTATCAAC+TGG | + | chr6_4:86698341-86698360 | Msa1002050:intron | 35.0% |
| TGTTCTCGCTTGCATTTATT+TGG | + | chr6_4:86698595-86698614 | Msa1002050:intron | 35.0% | |
| GATAGGAAAAGAGAAAGGTT+TGG | + | chr6_4:86698761-86698780 | Msa1002050:intron | 35.0% | |
| AGGTTTGGAAGATGTAGAAA+TGG | + | chr6_4:86698776-86698795 | Msa1002050:intron | 35.0% | |
| GGTTTGGAAGATGTAGAAAT+GGG | + | chr6_4:86698777-86698796 | Msa1002050:intron | 35.0% | |
| GTTTGGAAGATGTAGAAATG+GGG | + | chr6_4:86698778-86698797 | Msa1002050:intron | 35.0% | |
| CACAATCATGACATGCATAT+GGG | - | chr6_4:86698829-86698848 | None:intergenic | 35.0% | |
| AATGGAACAGGAGAACAAAA+CGG | + | chr6_4:86698851-86698870 | Msa1002050:intron | 35.0% | |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | + | chr6_4:86698158-86698177 | Msa1002050:intron | 35.0% |
| AAGAATAAATAGGGGAGAGA+AGG | + | chr6_4:86698190-86698209 | Msa1002050:intron | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | + | chr6_4:86698191-86698210 | Msa1002050:intron | 35.0% | |
| AGATCATAGTTTCATTGGGT+AGG | + | chr6_4:86699567-86699586 | Msa1002050:intron | 35.0% | |
| ! | TGTTTTCATGCAATGGTTGA+AGG | + | chr6_4:86699626-86699645 | Msa1002050:intron | 35.0% |
| ! | CAATCAATTTAGGGCCTATT+TGG | + | chr6_4:86699658-86699677 | Msa1002050:intron | 35.0% |
| !! | GTGTAAGTTTTGTGTGACTT+TGG | + | chr6_4:86699707-86699726 | Msa1002050:intron | 35.0% |
| AAGACTCCTGTGTAAAAACA+AGG | + | chr6_4:86699821-86699840 | Msa1002050:intron | 35.0% | |
| TCCTGTGTAAAAACAAGGTA+AGG | + | chr6_4:86699826-86699845 | Msa1002050:intron | 35.0% | |
| !!! | ACCTTACCTTGTTTTTACAC+AGG | - | chr6_4:86699830-86699849 | None:intergenic | 35.0% |
| AGTGATAGTTTAGGGACTAT+TGG | - | chr6_4:86700113-86700132 | None:intergenic | 35.0% | |
| GAAGTGAGAGTGATAGTTTA+GGG | - | chr6_4:86700121-86700140 | None:intergenic | 35.0% | |
| TGAAGTGAGAGTGATAGTTT+AGG | - | chr6_4:86700122-86700141 | None:intergenic | 35.0% | |
| GGCAGAATCTATATACTTCA+TGG | - | chr6_4:86700366-86700385 | None:intergenic | 35.0% | |
| AGATGACAATTTCATAGGGT+AGG | + | chr6_4:86700566-86700585 | Msa1002050:intron | 35.0% | |
| !!! | ATTTTTGTTCTGGGACGATA+TGG | + | chr6_4:86700616-86700635 | Msa1002050:intron | 35.0% |
| CTAGATACAAAGCAGAAACA+CGG | + | chr6_4:86700675-86700694 | Msa1002050:intron | 35.0% | |
| TTAAACTATCACTGCCTTAC+TGG | - | chr6_4:86700743-86700762 | None:intergenic | 35.0% | |
| GCAGTGATAGTTTAAGAAAC+TGG | + | chr6_4:86700748-86700767 | Msa1002050:intron | 35.0% | |
| !! | TGTTGGTGCTACTTAGAAAA+CGG | + | chr6_4:86700863-86700882 | Msa1002050:intron | 35.0% |
| TAGTATGTGTCAATCCTTCA+TGG | - | chr6_4:86701170-86701189 | None:intergenic | 35.0% | |
| ACACTAACACATGTAAACTC+TGG | + | chr6_4:86701202-86701221 | Msa1002050:intron | 35.0% | |
| TTGAATGTAACCACATGTGT+CGG | + | chr6_4:86701333-86701352 | Msa1002050:intron | 35.0% | |
| TTCTAAATAGCACCAACACT+TGG | - | chr6_4:86701395-86701414 | None:intergenic | 35.0% | |
| ! | TACTTCAAGAGCTTGGATTT+TGG | - | chr6_4:86701764-86701783 | None:intergenic | 35.0% |
| TCTTATCTTTCTTGGGCATA+AGG | + | chr6_4:86701871-86701890 | Msa1002050:intron | 35.0% | |
| CCCAATGAATATACAATGCA+TGG | + | chr6_4:86701898-86701917 | Msa1002050:intron | 35.0% | |
| CCCATGCATTGTATATTCAT+TGG | - | chr6_4:86701902-86701921 | None:intergenic | 35.0% | |
| CCCAATGAATATACAATGCA+TGG | + | chr6_4:86701898-86701917 | Msa1002050:intron | 35.0% | |
| CCCATGCATTGTATATTCAT+TGG | - | chr6_4:86701902-86701921 | None:intergenic | 35.0% | |
| GCAAATTATGCACATTCTTG+GGG | - | chr6_4:86702023-86702042 | None:intergenic | 35.0% | |
| GCATATCCCAAACACAAATT+TGG | - | chr6_4:86702526-86702545 | None:intergenic | 35.0% | |
| CACAATAGGCAAAAGTTTGA+TGG | - | chr6_4:86702748-86702767 | None:intergenic | 35.0% | |
| ! | CATCAAACTTTTGCCTATTG+TGG | + | chr6_4:86702746-86702765 | Msa1002050:intron | 35.0% |
| GTTGTAGTTAATCCCACAAT+AGG | - | chr6_4:86702762-86702781 | None:intergenic | 35.0% | |
| TGGGATTAACTACAACTTCT+CGG | + | chr6_4:86702766-86702785 | Msa1002050:intron | 35.0% | |
| GACAACCTTGATTGACAAAA+AGG | + | chr6_4:86703406-86703425 | Msa1002050:CDS | 35.0% | |
| TATATATGCTATTGCTTGGC+AGG | + | chr6_4:86703513-86703532 | Msa1002050:intron | 35.0% | |
| CAGGGAATAGTTTATCAACT+TGG | + | chr6_4:86703637-86703656 | Msa1002050:intron | 35.0% | |
| TTGTCAATAGCACTAGATTG+TGG | + | chr6_4:86703711-86703730 | Msa1002050:intron | 35.0% | |
| !! | GAATCTATATTTCTGGGTTG+TGG | + | chr6_4:86704343-86704362 | Msa1002050:intron | 35.0% |
| TTCTAGGTATCTCATGATGA+TGG | + | chr6_4:86704490-86704509 | Msa1002050:intron | 35.0% | |
| ! | TGGAATCGTCTTTTCTTGTT+TGG | + | chr6_4:86704725-86704744 | Msa1002050:CDS | 35.0% |
| !! | GGAATCGTCTTTTCTTGTTT+GGG | + | chr6_4:86704726-86704745 | Msa1002050:CDS | 35.0% |
| !! | GAATCGTCTTTTCTTGTTTG+GGG | + | chr6_4:86704727-86704746 | Msa1002050:CDS | 35.0% |
| AAGGAATAGTAACTACAGAC+CGG | - | chr6_4:86704756-86704775 | None:intergenic | 35.0% | |
| GCATAGTTCACATAACACTA+GGG | - | chr6_4:86704854-86704873 | None:intergenic | 35.0% | |
| TGCATAGTTCACATAACACT+AGG | - | chr6_4:86704855-86704874 | None:intergenic | 35.0% | |
| GTTCATTAGTGAAATGGTTC+AGG | + | chr6_4:86704969-86704988 | Msa1002050:CDS | 35.0% | |
| ! | TCTCAGGTTTTTAACCTGTA+AGG | + | chr6_4:86705224-86705243 | Msa1002050:intron | 35.0% |
| TTAACCTGTAAGGTGTATGT+AGG | + | chr6_4:86705234-86705253 | Msa1002050:intron | 35.0% | |
| TTCAGAGTTCAAAAACCCAA+TGG | - | chr6_4:86705382-86705401 | None:intergenic | 35.0% | |
| !! | AAAAGAAGTTTTGGCAAGTC+AGG | - | chr6_4:86705558-86705577 | None:intergenic | 35.0% |
| ACTGTTTCACATATTTGTGG+AGG | + | chr6_4:86705578-86705597 | Msa1002050:intron | 35.0% | |
| ATCCATCTAGTTAAAAGCTG+TGG | + | chr6_4:86705664-86705683 | Msa1002050:intron | 35.0% | |
| TCCATCTAGTTAAAAGCTGT+GGG | + | chr6_4:86705665-86705684 | Msa1002050:intron | 35.0% | |
| !! | TGTTGATGACATTGACAGAA+AGG | - | chr6_4:86705887-86705906 | None:intergenic | 35.0% |
| !! | TATTTAAGGTAATGGGGTGA+AGG | - | chr6_4:86705921-86705940 | None:intergenic | 35.0% |
| ! | TTCTTTCACCTTTTTACAGG+TGG | + | chr6_4:86705995-86706014 | Msa1002050:intron | 35.0% |
| ! | GTAACAGTGGTCTTTTACAA+GGG | + | chr6_4:86706252-86706271 | Msa1002050:CDS | 35.0% |
| ! | AAGGCACTCCATTTCTTCTT+CGG | - | chr6_4:86697645-86697664 | None:intergenic | 40.0% |
| ! | AAGAAGAAATGGAGTGCCTT+TGG | + | chr6_4:86697645-86697664 | Msa1002050:CDS | 40.0% |
| ! | AATGGAGTGCCTTTGGATTA+TGG | + | chr6_4:86697652-86697671 | Msa1002050:CDS | 40.0% |
| GCAACAACACCATAATCCAA+AGG | - | chr6_4:86697664-86697683 | None:intergenic | 40.0% | |
| CCGATAAAGAAACTCGTGAT+AGG | + | chr6_4:86697727-86697746 | Msa1002050:CDS | 40.0% | |
| ACTGCTCCTGAATCTAATGA+TGG | + | chr6_4:86697774-86697793 | Msa1002050:CDS | 40.0% | |
| GAACTCCATTTCTGCCATAA+CGG | - | chr6_4:86698397-86698416 | None:intergenic | 40.0% | |
| CTTCTTTGCCATCAAACACT+CGG | - | chr6_4:86698419-86698438 | None:intergenic | 40.0% | |
| ATGGCAAAGAAGATGCATAC+TGG | + | chr6_4:86698427-86698446 | Msa1002050:intron | 40.0% | |
| TCTGTCAGTTTCTCTTCATC+TGG | - | chr6_4:86698495-86698514 | None:intergenic | 40.0% | |
| TATGCCAACTAACCTGTTGA+TGG | - | chr6_4:86698575-86698594 | None:intergenic | 40.0% | |
| !! | GGCGTTTTAAACCGGAATAT+CGG | + | chr6_4:86698616-86698635 | Msa1002050:intron | 40.0% |
| !! | GCGTTTTAAACCGGAATATC+GGG | + | chr6_4:86698617-86698636 | Msa1002050:intron | 40.0% |
| TCCTCTTCTTCATCAGACAT+AGG | - | chr6_4:86698651-86698670 | None:intergenic | 40.0% | |
| AGAGGAACCTGAAACTGAAT+TGG | + | chr6_4:86698665-86698684 | Msa1002050:intron | 40.0% | |
| AACCTGAAACTGAATTGGAC+CGG | + | chr6_4:86698670-86698689 | Msa1002050:intron | 40.0% | |
| ! | TTCTCTTTTCCTATCGTGGT+GGG | - | chr6_4:86698756-86698775 | None:intergenic | 40.0% |
| ! | TTTCTCTTTTCCTATCGTGG+TGG | - | chr6_4:86698757-86698776 | None:intergenic | 40.0% |
| ACCACGATAGGAAAAGAGAA+AGG | + | chr6_4:86698756-86698775 | Msa1002050:intron | 40.0% | |
| ! | ACCTTTCTCTTTTCCTATCG+TGG | - | chr6_4:86698760-86698779 | None:intergenic | 40.0% |
| CCACAATCATGACATGCATA+TGG | - | chr6_4:86698830-86698849 | None:intergenic | 40.0% | |
| CCATATGCATGTCATGATTG+TGG | + | chr6_4:86698827-86698846 | Msa1002050:intron | 40.0% | |
| GCATGTCATGATTGTGGAAA+TGG | + | chr6_4:86698833-86698852 | Msa1002050:intron | 40.0% | |
| CATGATTGTGGAAATGGAAC+AGG | + | chr6_4:86698839-86698858 | Msa1002050:intron | 40.0% | |
| AGAGATAAGGGGAACTACTA+TGG | + | chr6_4:86698917-86698936 | Msa1002050:intron | 40.0% | |
| GAGATAAGGGGAACTACTAT+GGG | + | chr6_4:86698918-86698937 | Msa1002050:intron | 40.0% | |
| ATACAGGATGATTGATGTCG+TGG | - | chr6_4:86698946-86698965 | None:intergenic | 40.0% | |
| GATATCATAAGTGTCCACCT+GGG | - | chr6_4:86699067-86699086 | None:intergenic | 40.0% | |
| TTATGATATCCTCCACCTTG+AGG | + | chr6_4:86699077-86699096 | Msa1002050:intron | 40.0% | |
| AAAGATTCACCTTGTCCTCA+AGG | - | chr6_4:86699095-86699114 | None:intergenic | 40.0% | |
| TGAGGACAAGGTGAATCTTT+AGG | + | chr6_4:86699095-86699114 | Msa1002050:intron | 40.0% | |
| GAGGACAAGGTGAATCTTTA+GGG | + | chr6_4:86699096-86699115 | Msa1002050:intron | 40.0% | |
| AGGACAAGGTGAATCTTTAG+GGG | + | chr6_4:86699097-86699116 | Msa1002050:intron | 40.0% | |
| TGAAACAACACATGTCGACA+CGG | - | chr6_4:86699442-86699461 | None:intergenic | 40.0% | |
| ! | TGAAGTCTTATCCCACTAAG+CGG | - | chr6_4:86700327-86700346 | None:intergenic | 40.0% |
| !! | GATATGGATGTGGGTTTTGT+TGG | + | chr6_4:86700632-86700651 | Msa1002050:intron | 40.0% |
| ATGCCTTCAAACTGAACTGT+TGG | + | chr6_4:86700846-86700865 | Msa1002050:intron | 40.0% | |
| !! | GTTGGTGCTACTTAGAAAAC+GGG | + | chr6_4:86700864-86700883 | Msa1002050:intron | 40.0% |
| !! | GAGAAAATGGATTGATGCAG+TGG | + | chr6_4:86701072-86701091 | Msa1002050:intron | 40.0% |
| ! | TTAGCATAGCTGGGATGTTT+TGG | + | chr6_4:86701096-86701115 | Msa1002050:intron | 40.0% |
| TGCGAAAGAGAATACCAAGT+AGG | + | chr6_4:86701557-86701576 | Msa1002050:intron | 40.0% | |
| GCGAAAGAGAATACCAAGTA+GGG | + | chr6_4:86701558-86701577 | Msa1002050:intron | 40.0% | |
| ! | TCAAGAGCTTGGATTTTGGA+AGG | - | chr6_4:86701760-86701779 | None:intergenic | 40.0% |
| ATTAAGAGGTAAGGCAACGA+GGG | - | chr6_4:86702052-86702071 | None:intergenic | 40.0% | |
| CCTTACCTCTTAATGACACA+GGG | + | chr6_4:86702058-86702077 | Msa1002050:intron | 40.0% | |
| ! | ATAAGCCCTGTGTCATTAAG+AGG | - | chr6_4:86702066-86702085 | None:intergenic | 40.0% |
| CATGTCACGGTTGTATACAT+TGG | + | chr6_4:86702140-86702159 | Msa1002050:intron | 40.0% | |
| TTGTATACATTGGCATGGCA+TGG | + | chr6_4:86702150-86702169 | Msa1002050:intron | 40.0% | |
| AAACAGCTTCAATAGCACTG+TGG | + | chr6_4:86702431-86702450 | Msa1002050:CDS | 40.0% | |
| ! | TAAGATTTGAGTTTGAGGGG+CGG | - | chr6_4:86702553-86702572 | None:intergenic | 40.0% |
| GCATACACCTAATATACCAG+AGG | - | chr6_4:86702682-86702701 | None:intergenic | 40.0% | |
| ! | TATTCTGTTGCAGGGAGTAT+TGG | + | chr6_4:86703149-86703168 | Msa1002050:intron | 40.0% |
| TAAGAGAAATGATACGCGTG+AGG | + | chr6_4:86703203-86703222 | Msa1002050:CDS | 40.0% | |
| AAGAGAAATGATACGCGTGA+GGG | + | chr6_4:86703204-86703223 | Msa1002050:CDS | 40.0% | |
| ! | GCACACCTTTTTGTCAATCA+AGG | - | chr6_4:86703414-86703433 | None:intergenic | 40.0% |
| AACTTGAAGCACGGGATATT+TGG | - | chr6_4:86703569-86703588 | None:intergenic | 40.0% | |
| CTCAAATCAACTTGAAGCAC+GGG | - | chr6_4:86703577-86703596 | None:intergenic | 40.0% | |
| CCTCAAATCAACTTGAAGCA+CGG | - | chr6_4:86703578-86703597 | None:intergenic | 40.0% | |
| TCAATAGCACTAGATTGTGG+TGG | + | chr6_4:86703714-86703733 | Msa1002050:intron | 40.0% | |
| CAATAGCACTAGATTGTGGT+GGG | + | chr6_4:86703715-86703734 | Msa1002050:intron | 40.0% | |
| AATAGCACTAGATTGTGGTG+GGG | + | chr6_4:86703716-86703735 | Msa1002050:intron | 40.0% | |
| GAAGAGAAGAGGGGAAAATA+GGG | - | chr6_4:86703961-86703980 | None:intergenic | 40.0% | |
| TGAAGAGAAGAGGGGAAAAT+AGG | - | chr6_4:86703962-86703981 | None:intergenic | 40.0% | |
| AAACAACGTGAAGAGAAGAG+GGG | - | chr6_4:86703970-86703989 | None:intergenic | 40.0% | |
| CAAACAACGTGAAGAGAAGA+GGG | - | chr6_4:86703971-86703990 | None:intergenic | 40.0% | |
| TTGCAGCACAACTAGAAAGA+GGG | - | chr6_4:86704010-86704029 | None:intergenic | 40.0% | |
| TTTGCAGCACAACTAGAAAG+AGG | - | chr6_4:86704011-86704030 | None:intergenic | 40.0% | |
| AGAAAGAATACCCTCAACAC+TGG | - | chr6_4:86704072-86704091 | None:intergenic | 40.0% | |
| AACTCAATACTGAGATCGTC+GGG | - | chr6_4:86704272-86704291 | None:intergenic | 40.0% | |
| GAACTCAATACTGAGATCGT+CGG | - | chr6_4:86704273-86704292 | None:intergenic | 40.0% | |
| CTGTTGAAGTTTACAGCTTG+TGG | - | chr6_4:86704308-86704327 | None:intergenic | 40.0% | |
| GTGCAGGCTAATATCAGATT+TGG | + | chr6_4:86704674-86704693 | Msa1002050:intron | 40.0% | |
| CAGGCTAATATCAGATTTGG+TGG | + | chr6_4:86704677-86704696 | Msa1002050:intron | 40.0% | |
| AGAAAAGACGATTCCACCAA+TGG | - | chr6_4:86704721-86704740 | None:intergenic | 40.0% | |
| ATGTGAACTATGCAGAGTGT+TGG | + | chr6_4:86704861-86704880 | Msa1002050:intron | 40.0% | |
| ! | TGTGAACTATGCAGAGTGTT+GGG | + | chr6_4:86704862-86704881 | Msa1002050:intron | 40.0% |
| TTCAAACACTGCAGTTAGTG+AGG | - | chr6_4:86705091-86705110 | None:intergenic | 40.0% | |
| GTAACCTACATACACCTTAC+AGG | - | chr6_4:86705241-86705260 | None:intergenic | 40.0% | |
| GTTTCACATATTTGTGGAGG+CGG | + | chr6_4:86705581-86705600 | Msa1002050:intron | 40.0% | |
| CCATCTAGTTAAAAGCTGTG+GGG | + | chr6_4:86705666-86705685 | Msa1002050:intron | 40.0% | |
| TTTGCTTTGCAGTTATGTGG+AGG | + | chr6_4:86705832-86705851 | Msa1002050:intron | 40.0% | |
| ATGTGGAGGAAAATTGTCTG+AGG | + | chr6_4:86705846-86705865 | Msa1002050:CDS | 40.0% | |
| TGTGGAGGAAAATTGTCTGA+GGG | + | chr6_4:86705847-86705866 | Msa1002050:CDS | 40.0% | |
| !! | ACAGGTGGTAAAGTTTTTGG+TGG | + | chr6_4:86706010-86706029 | Msa1002050:intron | 40.0% |
| !!! | TGGTAAAGTTTTTGGTGGAG+CGG | + | chr6_4:86706015-86706034 | Msa1002050:CDS | 40.0% |
| TCCTCTACCACCTTTATATC+AGG | + | chr6_4:86706184-86706203 | Msa1002050:intron | 40.0% | |
| TCCTGATATAAAGGTGGTAG+AGG | - | chr6_4:86706188-86706207 | None:intergenic | 40.0% | |
| ACTGCACAGTCCTGATATAA+AGG | - | chr6_4:86706197-86706216 | None:intergenic | 40.0% | |
| TTTATATCAGGACTGTGCAG+TGG | + | chr6_4:86706196-86706215 | Msa1002050:intron | 40.0% | |
| TTATATCAGGACTGTGCAGT+GGG | + | chr6_4:86706197-86706216 | Msa1002050:intron | 40.0% | |
| ! | GGTAACAGTGGTCTTTTACA+AGG | + | chr6_4:86706251-86706270 | Msa1002050:CDS | 40.0% |
| TGATCGTGATCTGTTGTGCT+AGG | + | chr6_4:86697685-86697704 | Msa1002050:CDS | 45.0% | |
| GATCGTGATCTGTTGTGCTA+GGG | + | chr6_4:86697686-86697705 | Msa1002050:CDS | 45.0% | |
| ! | TGTGCTAGGGTTTGTTCATC+TGG | + | chr6_4:86697699-86697718 | Msa1002050:CDS | 45.0% |
| ATCTGAGGATTTGACTGGGA+AGG | + | chr6_4:86698227-86698246 | Msa1002050:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | + | chr6_4:86698228-86698247 | Msa1002050:intron | 45.0% | |
| !! | AAGGGGCCATTTTGGCATTA+GGG | + | chr6_4:86698246-86698265 | Msa1002050:intron | 45.0% |
| TGGTATCAGAGCAACGATCT+CGG | + | chr6_4:86698361-86698380 | Msa1002050:intron | 45.0% | |
| TTTCTGCCATAACGGTACCA+CGG | - | chr6_4:86698389-86698408 | None:intergenic | 45.0% | |
| TGGTACCGTTATGGCAGAAA+TGG | + | chr6_4:86698389-86698408 | Msa1002050:intron | 45.0% | |
| ATGGAGTTCCGAGTGTTTGA+TGG | + | chr6_4:86698408-86698427 | Msa1002050:intron | 45.0% | |
| GCAAAGAAGATGCATACTGG+TGG | + | chr6_4:86698430-86698449 | Msa1002050:intron | 45.0% | |
| ! | GATGCGTTGATGTTACTCAG+AGG | + | chr6_4:86698513-86698532 | Msa1002050:intron | 45.0% |
| GGCATGATATCCCGATATTC+CGG | - | chr6_4:86698630-86698649 | None:intergenic | 45.0% | |
| GCCTATGTCTGATGAAGAAG+AGG | + | chr6_4:86698647-86698666 | Msa1002050:intron | 45.0% | |
| AACCGGTCCAATTCAGTTTC+AGG | - | chr6_4:86698675-86698694 | None:intergenic | 45.0% | |
| ATGAACCTTGAGTCGTCAAC+CGG | - | chr6_4:86698692-86698711 | None:intergenic | 45.0% | |
| TCAACCACAAGATAGTGACC+AGG | + | chr6_4:86698719-86698738 | Msa1002050:intron | 45.0% | |
| CAACCACAAGATAGTGACCA+GGG | + | chr6_4:86698720-86698739 | Msa1002050:intron | 45.0% | |
| TTTCCCTGGTCACTATCTTG+TGG | - | chr6_4:86698726-86698745 | None:intergenic | 45.0% | |
| AATCCAAATCCCACCACGAT+AGG | + | chr6_4:86698744-86698763 | Msa1002050:intron | 45.0% | |
| ! | TTTCCTATCGTGGTGGGATT+TGG | - | chr6_4:86698750-86698769 | None:intergenic | 45.0% |
| TGAGTATGGGGTCAGAGATA+AGG | + | chr6_4:86698904-86698923 | Msa1002050:intron | 45.0% | |
| GAGTATGGGGTCAGAGATAA+GGG | + | chr6_4:86698905-86698924 | Msa1002050:intron | 45.0% | |
| AGTATGGGGTCAGAGATAAG+GGG | + | chr6_4:86698906-86698925 | Msa1002050:intron | 45.0% | |
| ! | TACTTCAAGTTATGGGACCC+AGG | + | chr6_4:86699047-86699066 | Msa1002050:intron | 45.0% |
| GGATATCATAAGTGTCCACC+TGG | - | chr6_4:86699068-86699087 | None:intergenic | 45.0% | |
| GGACAAGGTGAATCTTTAGG+GGG | + | chr6_4:86699098-86699117 | Msa1002050:intron | 45.0% | |
| ! | GACAAGGTGAATCTTTAGGG+GGG | + | chr6_4:86699099-86699118 | Msa1002050:intron | 45.0% |
| ! | ACAAGGTGAATCTTTAGGGG+GGG | + | chr6_4:86699100-86699119 | Msa1002050:intron | 45.0% |
| ATCTGAGGATTTGACTGGGA+AGG | + | chr6_4:86698227-86698246 | Msa1002050:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | + | chr6_4:86698228-86698247 | Msa1002050:intron | 45.0% | |
| !! | AAGGGGCCATTTTGGCATTA+GGG | + | chr6_4:86698246-86698265 | Msa1002050:intron | 45.0% |
| CATACATAGGGTCTGAGAAG+GGG | - | chr6_4:86699886-86699905 | None:intergenic | 45.0% | |
| GCATACATAGGGTCTGAGAA+GGG | - | chr6_4:86699887-86699906 | None:intergenic | 45.0% | |
| CTTCTCAGACCCTATGTATG+CGG | + | chr6_4:86699886-86699905 | Msa1002050:intron | 45.0% | |
| TTCTCAGACCCTATGTATGC+GGG | + | chr6_4:86699887-86699906 | Msa1002050:intron | 45.0% | |
| ACAAAGCTCCCGCATACATA+GGG | - | chr6_4:86699898-86699917 | None:intergenic | 45.0% | |
| TAAGCTATAAATGGGCAGCC+CGG | - | chr6_4:86699924-86699943 | None:intergenic | 45.0% | |
| TTAGGGACTATTGGCGTGTT+TGG | - | chr6_4:86700104-86700123 | None:intergenic | 45.0% | |
| ! | CTAGGTTTTCTTCTGCCTCT+AGG | - | chr6_4:86700197-86700216 | None:intergenic | 45.0% |
| ! | AAGTCTTATCCCACTAAGCG+GGG | - | chr6_4:86700325-86700344 | None:intergenic | 45.0% |
| ! | GAAGTCTTATCCCACTAAGC+GGG | - | chr6_4:86700326-86700345 | None:intergenic | 45.0% |
| !! | TTCTGGGACGATATGGATGT+GGG | + | chr6_4:86700623-86700642 | Msa1002050:intron | 45.0% |
| ACCACACCTAGATACCAGTA+AGG | + | chr6_4:86700726-86700745 | Msa1002050:intron | 45.0% | |
| TCACTGCCTTACTGGTATCT+AGG | - | chr6_4:86700735-86700754 | None:intergenic | 45.0% | |
| TCAGTGACACTGACACGTAT+CGG | + | chr6_4:86700814-86700833 | Msa1002050:intron | 45.0% | |
| GCACCAACAGTTCAGTTTGA+AGG | - | chr6_4:86700852-86700871 | None:intergenic | 45.0% | |
| ATGCAGTGGTTTAGCATAGC+TGG | + | chr6_4:86701086-86701105 | Msa1002050:intron | 45.0% | |
| TGCAGTGGTTTAGCATAGCT+GGG | + | chr6_4:86701087-86701106 | Msa1002050:intron | 45.0% | |
| CAATGGTAAATGGGCCATGA+AGG | + | chr6_4:86701153-86701172 | Msa1002050:intron | 45.0% | |
| TGAAAAGACACCGACACATG+TGG | - | chr6_4:86701346-86701365 | None:intergenic | 45.0% | |
| TATCTGACACTGCCAAGTGT+TGG | + | chr6_4:86701380-86701399 | Msa1002050:intron | 45.0% | |
| ! | TGGACGATGTTTTCCCTACT+TGG | - | chr6_4:86701574-86701593 | None:intergenic | 45.0% |
| ! | CAATGACATCGGCTACTTGT+GGG | - | chr6_4:86701806-86701825 | None:intergenic | 45.0% |
| TTAAGAGGTAAGGCAACGAG+GGG | - | chr6_4:86702051-86702070 | None:intergenic | 45.0% | |
| CATTAAGAGGTAAGGCAACG+AGG | - | chr6_4:86702053-86702072 | None:intergenic | 45.0% | |
| GCCTTACCTCTTAATGACAC+AGG | + | chr6_4:86702057-86702076 | Msa1002050:intron | 45.0% | |
| ! | CCCTGTGTCATTAAGAGGTA+AGG | - | chr6_4:86702061-86702080 | None:intergenic | 45.0% |
| CACGGTTGTATACATTGGCA+TGG | + | chr6_4:86702145-86702164 | Msa1002050:intron | 45.0% | |
| ! | AAGATTTGAGTTTGAGGGGC+GGG | - | chr6_4:86702552-86702571 | None:intergenic | 45.0% |
| ! | ACCATTTTCCCCTAGTCAAG+AGG | + | chr6_4:86703065-86703084 | Msa1002050:intron | 45.0% |
| ! | CCATTTTCCCCTAGTCAAGA+GGG | + | chr6_4:86703066-86703085 | Msa1002050:intron | 45.0% |
| ATGCAAACCCTCTTGACTAG+GGG | - | chr6_4:86703076-86703095 | None:intergenic | 45.0% | |
| CATGCAAACCCTCTTGACTA+GGG | - | chr6_4:86703077-86703096 | None:intergenic | 45.0% | |
| ACATGCAAACCCTCTTGACT+AGG | - | chr6_4:86703078-86703097 | None:intergenic | 45.0% | |
| ! | GAAATGATCTTGTGCCACTG+AGG | - | chr6_4:86703340-86703359 | None:intergenic | 45.0% |
| !! | CCGTGCTTCAAGTTGATTTG+AGG | + | chr6_4:86703575-86703594 | Msa1002050:CDS | 45.0% |
| ATAGCACTAGATTGTGGTGG+GGG | + | chr6_4:86703717-86703736 | Msa1002050:intron | 45.0% | |
| CACGCAAAACCAAAAAGCCA+CGG | - | chr6_4:86703811-86703830 | None:intergenic | 45.0% | |
| GCAAACAACGTGAAGAGAAG+AGG | - | chr6_4:86703972-86703991 | None:intergenic | 45.0% | |
| AGAATACCCTCAACACTGGT+GGG | - | chr6_4:86704068-86704087 | None:intergenic | 45.0% | |
| AAGAATACCCTCAACACTGG+TGG | - | chr6_4:86704069-86704088 | None:intergenic | 45.0% | |
| CAGACAGAGTCACAGAACAA+AGG | + | chr6_4:86704138-86704157 | Msa1002050:intron | 45.0% | |
| ! | AAAAGCACAAACAGGGAACC+TGG | - | chr6_4:86704209-86704228 | None:intergenic | 45.0% |
| GAAGTTTACAGCTTGTGGAG+CGG | - | chr6_4:86704303-86704322 | None:intergenic | 45.0% | |
| TAGTAATTGCGCATTCGTGC+AGG | + | chr6_4:86704658-86704677 | Msa1002050:intron | 45.0% | |
| ATCATCGTTTCTGCAGCCAT+TGG | + | chr6_4:86704702-86704721 | Msa1002050:CDS | 45.0% | |
| !! | CTTTTCTTGTTTGGGGCAAC+CGG | + | chr6_4:86704734-86704753 | Msa1002050:CDS | 45.0% |
| ! | ATTGTGGGCTATCTTCTTGC+AGG | + | chr6_4:86704919-86704938 | Msa1002050:CDS | 45.0% |
| CTAATGAACTTCAAACCCCC+TGG | - | chr6_4:86704958-86704977 | None:intergenic | 45.0% | |
| !! | ACAGCATTGACTTGTGTCTC+AGG | + | chr6_4:86705208-86705227 | Msa1002050:intron | 45.0% |
| TTGAGACGGTCGCACAATTT+GGG | + | chr6_4:86705476-86705495 | Msa1002050:CDS | 45.0% | |
| !!! | TCTTTTGTTTGCTTTGGGGC+TGG | + | chr6_4:86705507-86705526 | Msa1002050:CDS | 45.0% |
| CAGGAATACAAACCTTGCCA+AGG | - | chr6_4:86705539-86705558 | None:intergenic | 45.0% | |
| !! | CCCCACAGCTTTTAACTAGA+TGG | - | chr6_4:86705669-86705688 | None:intergenic | 45.0% |
| CGGAATTCTTGCCATGGTAT+GGG | + | chr6_4:86705744-86705763 | Msa1002050:intron | 45.0% | |
| GGAATTCTTGCCATGGTATG+GGG | + | chr6_4:86705745-86705764 | Msa1002050:intron | 45.0% | |
| GTCAATGTCATCAACAGCAG+TGG | + | chr6_4:86705891-86705910 | Msa1002050:CDS | 45.0% | |
| GCACAGTCCTGATATAAAGG+TGG | - | chr6_4:86706194-86706213 | None:intergenic | 45.0% | |
| ATTTGCTTTGCTCCCTGTCT+TGG | + | chr6_4:86706226-86706245 | Msa1002050:CDS | 45.0% | |
| TTTGCTTTGCTCCCTGTCTT+GGG | + | chr6_4:86706227-86706246 | Msa1002050:CDS | 45.0% | |
| !! | TTTAAAAATAATTAAAGTTA+TGG | - | chr6_4:86703307-86703326 | None:intergenic | 5.0% |
| !!! | TAAATTTTTAATTAATATTC+AGG | + | chr6_4:86703618-86703637 | Msa1002050:intron | 5.0% |
| !!! | AAATTTTTAATTAATATTCA+GGG | + | chr6_4:86703619-86703638 | Msa1002050:intron | 5.0% |
| !!! | CAATATATATTTTATATTTA+AGG | - | chr6_4:86705935-86705954 | None:intergenic | 5.0% |
| GGGAGAGAAGGGAAGATTGA+GGG | + | chr6_4:86698202-86698221 | Msa1002050:intron | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | + | chr6_4:86698203-86698222 | Msa1002050:intron | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | + | chr6_4:86698223-86698242 | Msa1002050:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | + | chr6_4:86698229-86698248 | Msa1002050:intron | 50.0% | |
| !! | GAAGGGGCCATTTTGGCATT+AGG | + | chr6_4:86698245-86698264 | Msa1002050:intron | 50.0% |
| GCACCTCCCTAATGCCAAAA+TGG | - | chr6_4:86698255-86698274 | None:intergenic | 50.0% | |
| GATTCCACCAGTGTGACCAT+TGG | - | chr6_4:86698548-86698567 | None:intergenic | 50.0% | |
| GACGCCATCAACAGGTTAGT+TGG | + | chr6_4:86698568-86698587 | Msa1002050:intron | 50.0% | |
| TGGTGGGATTTGGATTTCCC+TGG | - | chr6_4:86698740-86698759 | None:intergenic | 50.0% | |
| ! | TTCAAGTTATGGGACCCAGG+TGG | + | chr6_4:86699050-86699069 | Msa1002050:intron | 50.0% |
| TATCCTCCACCTTGAGGACA+AGG | + | chr6_4:86699083-86699102 | Msa1002050:intron | 50.0% | |
| GATTCACCTTGTCCTCAAGG+TGG | - | chr6_4:86699092-86699111 | None:intergenic | 50.0% | |
| GGGAGAGAAGGGAAGATTGA+GGG | + | chr6_4:86698202-86698221 | Msa1002050:intron | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | + | chr6_4:86698203-86698222 | Msa1002050:intron | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | + | chr6_4:86698223-86698242 | Msa1002050:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | + | chr6_4:86698229-86698248 | Msa1002050:intron | 50.0% | |
| !! | GAAGGGGCCATTTTGGCATT+AGG | + | chr6_4:86698245-86698264 | Msa1002050:intron | 50.0% |
| GCACCTCCCTAATGCCAAAA+TGG | - | chr6_4:86698255-86698274 | None:intergenic | 50.0% | |
| CGCATACATAGGGTCTGAGA+AGG | - | chr6_4:86699888-86699907 | None:intergenic | 50.0% | |
| CACAAAGCTCCCGCATACAT+AGG | - | chr6_4:86699899-86699918 | None:intergenic | 50.0% | |
| !! | GTTCTGGGACGATATGGATG+TGG | + | chr6_4:86700622-86700641 | Msa1002050:intron | 50.0% |
| GCCTTACTGGTATCTAGGTG+TGG | - | chr6_4:86700730-86700749 | None:intergenic | 50.0% | |
| ! | GCAATGACATCGGCTACTTG+TGG | - | chr6_4:86701807-86701826 | None:intergenic | 50.0% |
| GAATTAGGTCCGATTTCCGC+TGG | + | chr6_4:86701921-86701940 | Msa1002050:intron | 50.0% | |
| GAATTAGGTCCGATTTCCGC+TGG | + | chr6_4:86701921-86701940 | Msa1002050:intron | 50.0% | |
| TAAGAGGTAAGGCAACGAGG+GGG | - | chr6_4:86702050-86702069 | None:intergenic | 50.0% | |
| ! | AGATTTGAGTTTGAGGGGCG+GGG | - | chr6_4:86702551-86702570 | None:intergenic | 50.0% |
| CCCTCTTGACTAGGGGAAAA+TGG | - | chr6_4:86703069-86703088 | None:intergenic | 50.0% | |
| ACACCCTGGTATTCTGTTGC+AGG | + | chr6_4:86703140-86703159 | Msa1002050:intron | 50.0% | |
| CACCCTGGTATTCTGTTGCA+GGG | + | chr6_4:86703141-86703160 | Msa1002050:intron | 50.0% | |
| CTCCCTGCAACAGAATACCA+GGG | - | chr6_4:86703146-86703165 | None:intergenic | 50.0% | |
| ACTCCCTGCAACAGAATACC+AGG | - | chr6_4:86703147-86703166 | None:intergenic | 50.0% | |
| GCTTCAAGACGTGTTCTCTC+TGG | + | chr6_4:86703361-86703380 | Msa1002050:CDS | 50.0% | |
| ! | CGTGTTCTCTCTGGAAAACG+AGG | + | chr6_4:86703370-86703389 | Msa1002050:CDS | 50.0% |
| GGCTGAGTGTAGTAGAACAG+TGG | + | chr6_4:86703738-86703757 | Msa1002050:intron | 50.0% | |
| AGCAGACCAGAATAGAGGTG+CGG | + | chr6_4:86703785-86703804 | Msa1002050:intron | 50.0% | |
| ACCATTTGTGCGCTGCTAGA+GGG | + | chr6_4:86703835-86703854 | Msa1002050:intron | 50.0% | |
| !! | AGAGGGGTGCTACAATGTTG+AGG | + | chr6_4:86703852-86703871 | Msa1002050:intron | 50.0% |
| !! | GAGGGGTGCTACAATGTTGA+GGG | + | chr6_4:86703853-86703872 | Msa1002050:intron | 50.0% |
| ACTCTGTCTGCACAGAACAC+AGG | - | chr6_4:86704128-86704147 | None:intergenic | 50.0% | |
| TTTCACCTGTTCTGTGCACC+AGG | + | chr6_4:86704188-86704207 | Msa1002050:intron | 50.0% | |
| AATACTGAGATCGTCGGGTG+CGG | - | chr6_4:86704267-86704286 | None:intergenic | 50.0% | |
| ATCGTTTCTGCAGCCATTGG+TGG | + | chr6_4:86704705-86704724 | Msa1002050:CDS | 50.0% | |
| CTTCTTGCAGGCTCCCTTAT+TGG | + | chr6_4:86704931-86704950 | Msa1002050:CDS | 50.0% | |
| CAAACCCCCTGGTCCAATAA+GGG | - | chr6_4:86704947-86704966 | None:intergenic | 50.0% | |
| TCAAACCCCCTGGTCCAATA+AGG | - | chr6_4:86704948-86704967 | None:intergenic | 50.0% | |
| GTTGAGACGGTCGCACAATT+TGG | + | chr6_4:86705475-86705494 | Msa1002050:CDS | 50.0% | |
| TGAGACGGTCGCACAATTTG+GGG | + | chr6_4:86705477-86705496 | Msa1002050:CDS | 50.0% | |
| !! | TTTGGGGCTGGAGTTTTCCT+TGG | + | chr6_4:86705519-86705538 | Msa1002050:CDS | 50.0% |
| CCATGGCAAGAATTCCGCAA+AGG | - | chr6_4:86705741-86705760 | None:intergenic | 50.0% | |
| CCTTTGCGGAATTCTTGCCA+TGG | + | chr6_4:86705738-86705757 | Msa1002050:CDS | 50.0% | |
| GCGGAATTCTTGCCATGGTA+TGG | + | chr6_4:86705743-86705762 | Msa1002050:intron | 50.0% | |
| CACTGTTACCACCCAAGACA+GGG | - | chr6_4:86706241-86706260 | None:intergenic | 50.0% | |
| GGGGAGAGAAGGGAAGATTG+AGG | + | chr6_4:86698201-86698220 | Msa1002050:intron | 55.0% | |
| !! | GGAAGATTGAGGGGCATCTG+AGG | + | chr6_4:86698212-86698231 | Msa1002050:intron | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | + | chr6_4:86698222-86698241 | Msa1002050:intron | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | + | chr6_4:86698238-86698257 | Msa1002050:intron | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | + | chr6_4:86698249-86698268 | Msa1002050:intron | 55.0% |
| TCGGAACCGTGGTACCGTTA+TGG | + | chr6_4:86698380-86698399 | Msa1002050:intron | 55.0% | |
| CTGGTGGCTGCTATGCATTG+AGG | + | chr6_4:86698446-86698465 | Msa1002050:intron | 55.0% | |
| GTGGAATCGACGCCATCAAC+AGG | + | chr6_4:86698560-86698579 | Msa1002050:intron | 55.0% | |
| TTGGACCGGTTGACGACTCA+AGG | + | chr6_4:86698684-86698703 | Msa1002050:intron | 55.0% | |
| TCACCTTGTCCTCAAGGTGG+AGG | - | chr6_4:86699089-86699108 | None:intergenic | 55.0% | |
| GGGGAGAGAAGGGAAGATTG+AGG | + | chr6_4:86698201-86698220 | Msa1002050:intron | 55.0% | |
| !! | GGAAGATTGAGGGGCATCTG+AGG | + | chr6_4:86698212-86698231 | Msa1002050:intron | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | + | chr6_4:86698222-86698241 | Msa1002050:intron | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | + | chr6_4:86698238-86698257 | Msa1002050:intron | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | + | chr6_4:86698249-86698268 | Msa1002050:intron | 55.0% |
| TGAGAAGGGGTCGCACCATT+TGG | - | chr6_4:86699873-86699892 | None:intergenic | 55.0% | |
| ! | TATGCGGGAGCTTTGTGCAC+CGG | + | chr6_4:86699902-86699921 | Msa1002050:intron | 55.0% |
| CTTATCCCACTAAGCGGGGT+CGG | - | chr6_4:86700321-86700340 | None:intergenic | 55.0% | |
| GGCTACCTTATGCCCTCTTG+GGG | - | chr6_4:86701951-86701970 | None:intergenic | 55.0% | |
| GGGCTACCTTATGCCCTCTT+GGG | - | chr6_4:86701952-86701971 | None:intergenic | 55.0% | |
| ACATTCTTGGGGCTCTCCAG+CGG | - | chr6_4:86702012-86702031 | None:intergenic | 55.0% | |
| TAGCACTGTGGCTGATCAGC+AGG | + | chr6_4:86702443-86702462 | Msa1002050:CDS | 55.0% | |
| ACTGTGGCTGATCAGCAGGT+AGG | + | chr6_4:86702447-86702466 | Msa1002050:intron | 55.0% | |
| TAGCCGCCTTCTGTATGCGA+CGG | + | chr6_4:86703762-86703781 | Msa1002050:intron | 55.0% | |
| TCTGCTCCGTCGCATACAGA+AGG | - | chr6_4:86703771-86703790 | None:intergenic | 55.0% | |
| GACGGAGCAGACCAGAATAG+AGG | + | chr6_4:86703780-86703799 | Msa1002050:intron | 55.0% | |
| CACCATTTGTGCGCTGCTAG+AGG | + | chr6_4:86703834-86703853 | Msa1002050:intron | 55.0% | |
| CCATTTGTGCGCTGCTAGAG+GGG | + | chr6_4:86703836-86703855 | Msa1002050:intron | 55.0% | |
| ! | TACCCTCAACACTGGTGGGT+GGG | - | chr6_4:86704064-86704083 | None:intergenic | 55.0% |
| ATACCCTCAACACTGGTGGG+TGG | - | chr6_4:86704065-86704084 | None:intergenic | 55.0% | |
| CTGTCTGCACAGAACACAGG+AGG | - | chr6_4:86704125-86704144 | None:intergenic | 55.0% | |
| ATACTGAGATCGTCGGGTGC+GGG | - | chr6_4:86704266-86704285 | None:intergenic | 55.0% | |
| CAGGCTCCCTTATTGGACCA+GGG | + | chr6_4:86704938-86704957 | Msa1002050:CDS | 55.0% | |
| AGGCTCCCTTATTGGACCAG+GGG | + | chr6_4:86704939-86704958 | Msa1002050:CDS | 55.0% | |
| ! | GGCTGGAGTTTTCCTTGGCA+AGG | + | chr6_4:86705524-86705543 | Msa1002050:CDS | 55.0% |
| ! | CCTGTTGCTGTTCTGCTGGA+GGG | + | chr6_4:86705689-86705708 | Msa1002050:CDS | 55.0% |
| CCACTGTTACCACCCAAGAC+AGG | - | chr6_4:86706242-86706261 | None:intergenic | 55.0% | |
| CCTGTCTTGGGTGGTAACAG+TGG | + | chr6_4:86706239-86706258 | Msa1002050:CDS | 55.0% | |
| GAGCAACGATCTCGGAACCG+TGG | + | chr6_4:86698369-86698388 | Msa1002050:intron | 60.0% | |
| TCAGAGGTCGTGCTCGCCAA+TGG | + | chr6_4:86698529-86698548 | Msa1002050:intron | 60.0% | |
| GTGCTCGCCAATGGTCACAC+TGG | + | chr6_4:86698538-86698557 | Msa1002050:intron | 60.0% | |
| CTCGCCAATGGTCACACTGG+TGG | + | chr6_4:86698541-86698560 | Msa1002050:intron | 60.0% | |
| ! | ATGCGGGAGCTTTGTGCACC+GGG | + | chr6_4:86699903-86699922 | Msa1002050:intron | 60.0% |
| ACTAAGCGGGGTCGGCTACA+TGG | - | chr6_4:86700313-86700332 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCGCTTAG+TGG | + | chr6_4:86700312-86700331 | Msa1002050:intron | 60.0% | |
| TGTAGCCGACCCCGCTTAGT+GGG | + | chr6_4:86700313-86700332 | Msa1002050:intron | 60.0% | |
| TGGGGCTCTCCAGCGGAAAT+CGG | - | chr6_4:86701933-86701952 | None:intergenic | 60.0% | |
| ! | GAGAGCCCCAAGAGGGCATA+AGG | + | chr6_4:86701943-86701962 | Msa1002050:intron | 60.0% |
| GGGGCTACCTTATGCCCTCT+TGG | - | chr6_4:86701953-86701972 | None:intergenic | 60.0% | |
| TGGGGCTCTCCAGCGGAAAT+CGG | - | chr6_4:86701933-86701952 | None:intergenic | 60.0% | |
| ! | TTTGAGTTTGAGGGGCGGGG+AGG | - | chr6_4:86702548-86702567 | None:intergenic | 60.0% |
| GCTCCGTCGCATACAGAAGG+CGG | - | chr6_4:86703768-86703787 | None:intergenic | 60.0% | |
| CCCCTCTAGCAGCGCACAAA+TGG | - | chr6_4:86703839-86703858 | None:intergenic | 60.0% | |
| ! | AACACTGGTGGGTGGGAGGT+GGG | - | chr6_4:86704057-86704076 | None:intergenic | 60.0% |
| ! | CTCCCACCCACCAGTGTTGA+GGG | + | chr6_4:86704059-86704078 | Msa1002050:intron | 60.0% |
| GGGAACCTGGTGCACAGAAC+AGG | - | chr6_4:86704196-86704215 | None:intergenic | 60.0% | |
| GCAGGCTCCCTTATTGGACC+AGG | + | chr6_4:86704937-86704956 | Msa1002050:CDS | 60.0% | |
| GGCTCCCTTATTGGACCAGG+GGG | + | chr6_4:86704940-86704959 | Msa1002050:CDS | 60.0% | |
| ! | GCCTGTTGCTGTTCTGCTGG+AGG | + | chr6_4:86705688-86705707 | Msa1002050:CDS | 60.0% |
| CCCTCCAGCAGAACAGCAAC+AGG | - | chr6_4:86705692-86705711 | None:intergenic | 60.0% | |
| CCACAGTCAGCCCCATACCA+TGG | - | chr6_4:86705758-86705777 | None:intergenic | 60.0% | |
| CCATGGTATGGGGCTGACTG+TGG | + | chr6_4:86705755-86705774 | Msa1002050:intron | 60.0% | |
| GCTTTGCTCCCTGTCTTGGG+TGG | + | chr6_4:86706230-86706249 | Msa1002050:CDS | 60.0% | |
| TTCCGCTGGAGAGCCCCAAG+AGG | + | chr6_4:86701935-86701954 | Msa1002050:intron | 65.0% | |
| TCCGCTGGAGAGCCCCAAGA+GGG | + | chr6_4:86701936-86701955 | Msa1002050:intron | 65.0% | |
| CCACGGCCGCACCTCTATTC+TGG | - | chr6_4:86703794-86703813 | None:intergenic | 65.0% | |
| ! | CCAGAATAGAGGTGCGGCCG+TGG | + | chr6_4:86703791-86703810 | Msa1002050:intron | 65.0% |
| ! | GAGGTGCGGCCGTGGCTTTT+TGG | + | chr6_4:86703799-86703818 | Msa1002050:intron | 65.0% |
| TGGGACGATGGCACAGGCTG+TGG | - | chr6_4:86704038-86704057 | None:intergenic | 65.0% | |
| ! | CAACACTGGTGGGTGGGAGG+TGG | - | chr6_4:86704058-86704077 | None:intergenic | 65.0% |
| ! | CCTCAACACTGGTGGGTGGG+AGG | - | chr6_4:86704061-86704080 | None:intergenic | 65.0% |
| CCTCCCACCCACCAGTGTTG+AGG | + | chr6_4:86704058-86704077 | Msa1002050:intron | 65.0% | |
| TGAGATCGTCGGGTGCGGGA+TGG | - | chr6_4:86704262-86704281 | None:intergenic | 65.0% | |
| CAGCTTGTGGAGCGGAGCAG+AGG | - | chr6_4:86704295-86704314 | None:intergenic | 65.0% | |
| ! | GGGGCCTGTTGCTGTTCTGC+TGG | + | chr6_4:86705685-86705704 | Msa1002050:CDS | 65.0% |
| GCCCTCTTGGGGCTCTCCAG+CGG | - | chr6_4:86701940-86701959 | None:intergenic | 70.0% | |
| GGGAGGTGGGACGATGGCAC+AGG | - | chr6_4:86704044-86704063 | None:intergenic | 70.0% | |
| GTGGGTGGGAGGTGGGACGA+TGG | - | chr6_4:86704050-86704069 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 86697636 | 86706298 | 86697636 | ID=Msa1002050;Name=Msa1002050 |
| chr6_4 | mRNA | 86697636 | 86706298 | 86697636 | ID=Msa1002050-mRNA-1;Parent=Msa1002050;Name=Msa1002050-mRNA-1;_AED=0.17;_eAED=0.18;_QI=0|0.27|0.16|1|1|1|12|0|341 |
| chr6_4 | exon | 86697636 | 86697861 | 86697636 | ID=Msa1002050-mRNA-1:exon:17017;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86702421 | 86702464 | 86702421 | ID=Msa1002050-mRNA-1:exon:17018;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86703162 | 86703229 | 86703162 | ID=Msa1002050-mRNA-1:exon:17019;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86703343 | 86703427 | 86703343 | ID=Msa1002050-mRNA-1:exon:17020;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86703535 | 86703596 | 86703535 | ID=Msa1002050-mRNA-1:exon:17021;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86704680 | 86704755 | 86704680 | ID=Msa1002050-mRNA-1:exon:17022;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86704916 | 86704990 | 86704916 | ID=Msa1002050-mRNA-1:exon:17023;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86705475 | 86705545 | 86705475 | ID=Msa1002050-mRNA-1:exon:17024;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86705681 | 86705759 | 86705681 | ID=Msa1002050-mRNA-1:exon:17025;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86705844 | 86705912 | 86705844 | ID=Msa1002050-mRNA-1:exon:17026;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86706014 | 86706091 | 86706014 | ID=Msa1002050-mRNA-1:exon:17027;Parent=Msa1002050-mRNA-1 |
| chr6_4 | exon | 86706206 | 86706298 | 86706206 | ID=Msa1002050-mRNA-1:exon:17028;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86697636 | 86697861 | 86697636 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86702421 | 86702464 | 86702421 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86703162 | 86703229 | 86703162 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86703343 | 86703427 | 86703343 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86703535 | 86703596 | 86703535 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86704680 | 86704755 | 86704680 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86704916 | 86704990 | 86704916 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86705475 | 86705545 | 86705475 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86705681 | 86705759 | 86705681 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86705844 | 86705912 | 86705844 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86706014 | 86706091 | 86706014 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| chr6_4 | CDS | 86706206 | 86706298 | 86706206 | ID=Msa1002050-mRNA-1:cds;Parent=Msa1002050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
