AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0610670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610670 MtrunA17_Chr4g0043691 96.767 1423 43 1 1 1423 1 1420 0.0 2850
Msa0610670 MtrunA17_Chr2g0311141 51.299 154 73 1 1 154 97 248 4.91e-40 157
Msa0610670 MtrunA17_Chr3g0081541 40.000 140 81 1 4 143 226 362 1.46e-26 117
Msa0610670 MtrunA17_Chr3g0081571 38.650 163 96 2 19 181 312 470 1.55e-26 117
Msa0610670 MtrunA17_Chr3g0131611 43.262 141 77 1 15 155 12 149 7.45e-26 113
Msa0610670 MtrunA17_Chr7g0243491 38.272 162 93 3 14 172 30 187 1.10e-24 108
Msa0610670 MtrunA17_Chr8g0388501 37.692 130 75 2 19 144 181 308 8.25e-18 86.3
Msa0610670 MtrunA17_Chr1g0179041 56.410 78 32 1 77 154 129 204 2.65e-17 87.0
Msa0610670 MtrunA17_Chr3g0120061 37.984 129 74 2 19 143 190 316 2.91e-17 85.1
Msa0610670 MtrunA17_Chr7g0225451 39.695 131 70 3 19 145 169 294 5.04e-17 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610670 AT2G35140.5 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0610670 AT2G35140.1 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0610670 AT2G35140.4 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0610670 AT2G35140.2 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0610670 AT2G35140.3 45.455 198 105 3 2 197 6 202 3.11e-42 168
Msa0610670 AT2G35140.6 45.455 198 105 3 2 197 32 228 4.74e-42 168
Msa0610670 AT3G11000.1 43.056 144 76 2 19 159 13 153 6.42e-26 114
Msa0610670 AT3G11000.2 43.056 144 76 2 19 159 132 272 6.30e-25 112
Msa0610670 AT5G61910.3 43.448 145 74 4 19 160 67 206 8.74e-25 112
Msa0610670 AT5G61910.1 43.448 145 74 4 19 160 63 202 9.43e-25 112
Msa0610670 AT5G61910.2 43.448 145 74 4 19 160 63 202 9.43e-25 112
Msa0610670 AT5G61910.5 43.448 145 74 4 19 160 63 202 1.20e-24 112
Msa0610670 AT5G61910.4 43.448 145 74 4 19 160 63 202 6.09e-24 110
Msa0610670 AT5G01660.3 39.130 138 81 1 19 153 20 157 1.37e-23 107
Msa0610670 AT2G32910.1 42.748 131 72 1 13 143 315 442 2.13e-23 107
Msa0610670 AT5G01660.2 39.130 138 81 1 19 153 20 157 3.25e-23 107
Msa0610670 AT5G01660.1 39.130 138 81 1 19 153 20 157 3.25e-23 107
Msa0610670 AT3G27090.1 37.500 128 74 2 19 142 164 289 1.11e-15 80.1
Msa0610670 AT3G27090.2 37.500 128 74 2 19 142 164 289 1.11e-15 80.1
Msa0610670 AT3G27090.3 37.500 128 74 2 19 142 164 289 1.11e-15 80.1
Msa0610670 AT5G42050.1 37.209 129 75 2 19 143 218 344 1.12e-15 80.9

Find 298 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCACTCTTGTTGAAATT+TGG 0.130590 4_2:+58521779 None:intergenic
AAAGATGGTTCTGAATATTT+AGG 0.161920 4_2:-58520261 Msa0610670:CDS
ACAACTTTGGTTGTTGTATT+AGG 0.178483 4_2:+58521923 None:intergenic
TGATAATCACAAATCATATT+TGG 0.190474 4_2:-58522791 Msa0610670:CDS
CTACCATACAATACAGAATT+TGG 0.190782 4_2:+58522973 None:intergenic
AAGTTTAACTTTGGGCTATC+TGG 0.226498 4_2:-58524172 Msa0610670:CDS
CCTATCCCTTCTTCTGATAT+TGG 0.229481 4_2:-58522853 Msa0610670:CDS
CTGATGTTCCTCTGGCAAAT+TGG 0.235548 4_2:-58522687 Msa0610670:CDS
AAAGAACTTTGCTCTAAATT+AGG 0.241063 4_2:+58523282 None:intergenic
CCTTGAGAACAACGATTATA+TGG 0.243470 4_2:-58523508 Msa0610670:CDS
CGTAATCATAAAGATGTTAT+TGG 0.250961 4_2:-58521689 Msa0610670:CDS
TTCAGGCAGCTACCATCTTT+TGG 0.253786 4_2:-58523138 Msa0610670:CDS
AGGAGCTGACGAAGACTTTA+AGG 0.258999 4_2:+58522873 None:intergenic
TGTTCAAAATGACAGAGTTT+TGG 0.265544 4_2:-58523826 Msa0610670:CDS
GCAATTGCTGACACCCTTCC+TGG 0.267730 4_2:-58520789 Msa0610670:CDS
TCAAATCAGTAGTTTGAAAA+AGG 0.292255 4_2:-58522191 Msa0610670:CDS
TGCAGTATCCAGAGAGAGTT+TGG 0.300252 4_2:+58523584 None:intergenic
GGCGAAGTTGGAAGATCTTT+TGG 0.300392 4_2:-58523939 Msa0610670:CDS
TCTGATGATGTTAGAGTTCA+TGG 0.301959 4_2:-58523438 Msa0610670:CDS
ATTGGATCATGGATACGATA+TGG 0.302068 4_2:-58522635 Msa0610670:CDS
TCTGATCCATCATTTAATTC+AGG 0.305246 4_2:+58521317 None:intergenic
TGGGTATGTTGGTGATTATT+TGG 0.306546 4_2:-58523559 Msa0610670:CDS
TCCTCTGACCACTATTTCTT+AGG 0.314959 4_2:+58523373 None:intergenic
TAATGTAAAATCAGCATCTT+TGG 0.316051 4_2:-58520406 Msa0610670:CDS
ATGCACTCTTGTTGAAATTT+GGG 0.317527 4_2:+58521780 None:intergenic
GCCCTTCCTACATTATTTGA+TGG 0.319243 4_2:-58521515 Msa0610670:CDS
AAGATGGTTCTGAATATTTA+GGG 0.319524 4_2:-58520260 Msa0610670:CDS
AGTATTAGTATAGAATCTTT+AGG 0.320535 4_2:-58524701 Msa0610670:five_prime_UTR
TGTTTCAAGAAGGGATTGTT+TGG 0.323448 4_2:-58524573 Msa0610670:CDS
GGCGAAGCTGGAAGATCTTT+TGG 0.326727 4_2:-58523870 Msa0610670:CDS
CCTACTGAGTACGGCTCTAA+TGG 0.328108 4_2:+58523891 None:intergenic
GAGAAGGAGCCACAATCTTT+TGG 0.329390 4_2:+58520294 None:intergenic
TAATTTAGAGCAAAGTTCTT+TGG 0.331218 4_2:-58523280 Msa0610670:CDS
AGAACCATCTTTAGCTTCAA+TGG 0.336234 4_2:+58520272 None:intergenic
TTGCACAGGAAGTGCTTAAA+TGG 0.342320 4_2:+58523214 None:intergenic
TTCAGTATTGTTGCGCTGAT+TGG 0.359013 4_2:+58522399 None:intergenic
CTGTATTGTATGGTAGCAAC+AGG 0.363364 4_2:-58522966 Msa0610670:CDS
AGGTTAAGTTCACTGAGATT+TGG 0.363461 4_2:-58524261 Msa0610670:CDS
GGTCAAACGTGAAGAACATT+TGG 0.367396 4_2:-58524782 Msa0610670:five_prime_UTR
CTTCTTCTTCTTCATACTAC+AGG 0.368933 4_2:+58522012 None:intergenic
GATCCAATGAATCATCATAT+TGG 0.372445 4_2:+58522650 None:intergenic
TTCCTTCCGCAGTTGGTTGA+TGG 0.373418 4_2:+58523075 None:intergenic
GCAGCTAACAAGTTTAACTT+TGG 0.375668 4_2:-58524181 Msa0610670:CDS
CGACCCCACTTGGTGGGATA+AGG 0.380330 4_2:+58520454 None:intergenic
TGATGTTCCTCTGGCAAATT+GGG 0.381340 4_2:-58522686 Msa0610670:CDS
ATGCTCCTGGCTTAAACTTC+AGG 0.382193 4_2:-58523155 Msa0610670:CDS
AATGCACAGAAGGAGGAATA+TGG 0.384066 4_2:-58522502 Msa0610670:CDS
CAGTACTCAGTTGGCGAAGT+TGG 0.385105 4_2:-58523951 Msa0610670:CDS
CTCTCTCTGGATACTGCAAA+TGG 0.388691 4_2:-58523579 Msa0610670:CDS
AGGCTTTGCCCTCAACTACT+TGG 0.390319 4_2:-58520722 Msa0610670:CDS
GTCAAACGTGAAGAACATTT+GGG 0.391681 4_2:-58524781 Msa0610670:five_prime_UTR
ACTGTTCATGCATTAATTGA+TGG 0.392786 4_2:-58520969 Msa0610670:CDS
CCGTACTCAGTAGGCGAAGC+TGG 0.393054 4_2:-58523882 Msa0610670:CDS
GGGTTCTGTGGCAGCGCAAT+AGG 0.398650 4_2:+58525347 None:intergenic
CCTTCCTTGCCGACCCCACT+TGG 0.400566 4_2:+58520444 None:intergenic
TAATGTAGAAGCAGCATCTC+TGG 0.405710 4_2:-58521393 Msa0610670:CDS
AAATACAGATGGCACAATAT+TGG 0.408910 4_2:-58523006 Msa0610670:CDS
AGTCCAATATGATGATTCAT+TGG 0.408949 4_2:-58522653 Msa0610670:CDS
TAGTTGAGGGCAAAGCCTTT+TGG 0.409070 4_2:+58520727 None:intergenic
GTTTGGTGAGCGGGAAGGGA+AGG 0.411151 4_2:+58525312 None:intergenic
AAGCTGAAGACAAAACCTTT+TGG 0.411294 4_2:+58520919 None:intergenic
CATAAAGATGTTATTGGAAG+TGG 0.412051 4_2:-58521683 Msa0610670:CDS
ATCAATTAGTGATAGGTTGA+TGG 0.412834 4_2:-58523403 Msa0610670:CDS
AGAGAAGATTATGCCCGATA+TGG 0.413671 4_2:-58524523 Msa0610670:CDS
TTTCCAAATTCTGTATTGTA+TGG 0.415903 4_2:-58522976 Msa0610670:CDS
CATCACCCGTGAACCTTCCT+TGG 0.417989 4_2:+58520680 None:intergenic
AAGCTGAGAACAAAACCTTT+TGG 0.418098 4_2:+58521081 None:intergenic
ATCTTCAGTGGAGGAGAGAA+AGG 0.419463 4_2:-58521548 Msa0610670:CDS
CTATGCTGCCAAACTCTCTC+TGG 0.420000 4_2:-58523592 Msa0610670:CDS
TTATCAAACAGTGAAGAAAA+TGG 0.422408 4_2:+58522808 None:intergenic
CAGCTAACAAGTTTAACTTT+GGG 0.424155 4_2:-58524180 Msa0610670:CDS
GAAGACAAAGACATTAATCT+TGG 0.425242 4_2:-58521752 Msa0610670:CDS
AAGCTGAGAACAAAACCTTT+TGG 0.426140 4_2:+58521465 None:intergenic
TATGAGAAGAAACTACTTCA+TGG 0.426279 4_2:-58524483 Msa0610670:CDS
TCTTCTGATATTGGAAATAG+TGG 0.427106 4_2:-58522844 Msa0610670:CDS
AAGCAGATTCTGACGCCAAC+TGG 0.428407 4_2:+58522923 None:intergenic
AAGCTGAGGACAAAACCTTT+TGG 0.428688 4_2:+58520535 None:intergenic
CAAAGAAGGTCTTCTGAGCT+TGG 0.428981 4_2:-58523708 Msa0610670:CDS
TTCATCCTTGTTGTGTTCCA+AGG 0.432140 4_2:+58522315 None:intergenic
ATCATTGACCCTCATTGTTA+CGG 0.436015 4_2:+58524674 None:intergenic
ATCTGCCTGTCTTCTACAAC+AGG 0.437441 4_2:-58523305 Msa0610670:CDS
ATAAAGATTGCACCGAAAAC+CGG 0.438890 4_2:+58524621 None:intergenic
TCCTTGCCGACCCCACTTGG+TGG 0.439527 4_2:+58520447 None:intergenic
TTTGGTGAGCGGGAAGGGAA+GGG 0.444058 4_2:+58525313 None:intergenic
CACCATACATGAACCTTCCT+TGG 0.444248 4_2:+58520872 None:intergenic
GTTTCAAGAAGGGATTGTTT+GGG 0.450309 4_2:-58524572 Msa0610670:CDS
CTTTGGGCTATCTGGAGATC+AGG 0.450553 4_2:-58524164 Msa0610670:intron
CCCTTCCTACATTATTTGAT+GGG 0.452385 4_2:-58521514 Msa0610670:CDS
CAATGCTCGCGGAAAAGATC+CGG 0.452682 4_2:-58524640 Msa0610670:CDS
AGAGTGAGAATTTGTTGGTT+GGG 0.456658 4_2:-58521829 Msa0610670:CDS
AGATCTCTTTGAAAATGCCT+TGG 0.457007 4_2:-58522248 Msa0610670:CDS
CCATATAATCGTTGTTCTCA+AGG 0.457580 4_2:+58523508 None:intergenic
CACTTCATCAACTGAAGTAA+TGG 0.457780 4_2:+58522477 None:intergenic
CCAAGTGGGGTCGGCAAGGA+AGG 0.457919 4_2:-58520444 Msa0610670:CDS
ATTAAGTTCTGATGTTCCTC+TGG 0.459264 4_2:-58522695 Msa0610670:CDS
CGTTGAATTCCTTCCGCAGT+TGG 0.461142 4_2:+58523068 None:intergenic
GCAGGTCATCAATTAGTGAT+AGG 0.462592 4_2:-58523410 Msa0610670:CDS
ATCTCTCTTCTTCCTCTGAC+TGG 0.463076 4_2:+58522267 None:intergenic
TGCCATTAAAAGATGAAAGC+AGG 0.463559 4_2:-58523650 Msa0610670:CDS
ACGCTTGAAATCAACAACTT+TGG 0.464373 4_2:+58521910 None:intergenic
ATTATATGGGCACACATCTC+AGG 0.465272 4_2:-58523494 Msa0610670:CDS
CCACTTGGTGGGATAAGGCT+TGG 0.465617 4_2:+58520459 None:intergenic
TTAGGTTTGGTGAGCGGGAA+GGG 0.465690 4_2:+58525308 None:intergenic
CCTAGCAAAGTGAATGCCTT+AGG 0.466361 4_2:+58524420 None:intergenic
AGTTAGAACCGGAGGTTCCT+AGG 0.468383 4_2:-58524010 Msa0610670:CDS
TGCACGTGATGTTAACAAAC+GGG 0.472052 4_2:-58522536 Msa0610670:CDS
CCTAAGGCATTCACTTTGCT+AGG 0.473973 4_2:-58524420 Msa0610670:CDS
GATGAAAGTTTGAGGAAGAA+AGG 0.475284 4_2:-58522127 Msa0610670:CDS
GATTCTCAAAATAGCAATCA+TGG 0.475985 4_2:-58522601 Msa0610670:CDS
TTCAGCTCCTTGTGTTGCAC+AGG 0.476509 4_2:+58523200 None:intergenic
TGCCTTGGATGATCTAAATA+CGG 0.478343 4_2:-58521972 Msa0610670:CDS
CTGTATGATTCAGATGCTCC+TGG 0.479009 4_2:-58523168 Msa0610670:CDS
ATGTGACAAGAAGTTTCAAC+TGG 0.480632 4_2:+58520216 None:intergenic
ACCTTTCCTGCATTAAATGA+TGG 0.482099 4_2:-58521131 Msa0610670:CDS
TTCCGCGAGCATTGTTGTTG+TGG 0.482131 4_2:+58524649 None:intergenic
TTCTCCATTGAAGCTAAAGA+TGG 0.482525 4_2:-58520276 Msa0610670:CDS
CAAGGAAGGTTCATGTATGA+TGG 0.485913 4_2:-58521417 Msa0610670:CDS
AGATTGCTCTGAAAATGCCT+TGG 0.485948 4_2:-58522161 Msa0610670:CDS
TTGGATCATGGATACGATAT+GGG 0.486675 4_2:-58522634 Msa0610670:CDS
AAAAGTAGCATCTCTGAAGA+TGG 0.486918 4_2:-58521033 Msa0610670:CDS
GGCATAATCTTCTCTACGAA+TGG 0.488960 4_2:+58524531 None:intergenic
ACAACAAGGATGAAAGCTTA+AGG 0.490749 4_2:-58522306 Msa0610670:CDS
TCATGCATTAATTGATGGAC+CGG 0.493185 4_2:-58520964 Msa0610670:CDS
TGGCAAGAAAAGATGACAGC+AGG 0.494172 4_2:-58523539 Msa0610670:CDS
CAAGGAAGGTTCATGTATGA+TGG 0.494249 4_2:-58520430 Msa0610670:CDS
TCAGTATTGTTGCGCTGATT+GGG 0.495031 4_2:+58522400 None:intergenic
CTCTTCATTCCAAGTAGTTG+AGG 0.496425 4_2:+58520713 None:intergenic
TTCATCCTCGTTGTGTTCCA+AGG 0.497384 4_2:+58522231 None:intergenic
CGACATGAACAAGTTAGAAC+CGG 0.497451 4_2:-58524021 Msa0610670:CDS
ACGGATTCCACAACTGTGAC+TGG 0.498542 4_2:-58521953 Msa0610670:CDS
TCTTCATTCCAAGTAGTTGA+GGG 0.499901 4_2:+58520714 None:intergenic
TATGATGATTCATTGGATCA+TGG 0.500586 4_2:-58522646 Msa0610670:CDS
AACGAAGAAAAGAGATTGCT+CGG 0.502419 4_2:-58522086 Msa0610670:CDS
AGTTGATGAAGTGATGGAAA+TGG 0.502770 4_2:-58522467 Msa0610670:CDS
TTTAGGTTTGGTGAGCGGGA+AGG 0.503324 4_2:+58525307 None:intergenic
GACAAAGACATTAATCTTGG+CGG 0.503998 4_2:-58521749 Msa0610670:CDS
AAGAGTGAGAATTTGTTGGT+TGG 0.504667 4_2:-58521830 Msa0610670:CDS
GCAACAATACTGAAAGTTTG+AGG 0.507451 4_2:-58522390 Msa0610670:CDS
ATGCACGTGATGTTAACAAA+CGG 0.508050 4_2:-58522537 Msa0610670:CDS
CCATTATTAATTCCAAAAGA+TGG 0.508188 4_2:+58523126 None:intergenic
GATTGCTCTGAAAATGCCTT+GGG 0.508618 4_2:-58522160 Msa0610670:CDS
TGATTGCTTTGAAAATGCCT+TGG 0.508748 4_2:-58522332 Msa0610670:CDS
AGATTGCTTTGAAAATGCCT+TGG 0.509112 4_2:-58521987 Msa0610670:CDS
CGGATATTCTTGCAATGCCA+TGG 0.509137 4_2:+58522753 None:intergenic
ATCTTTAGCTTCAATGGAGA+AGG 0.510043 4_2:+58520278 None:intergenic
AGGAAGTGCTTAAATGGAAT+GGG 0.510847 4_2:+58523220 None:intergenic
GCATAATCTTCTCTACGAAT+GGG 0.510972 4_2:+58524532 None:intergenic
ACCCTTCCTGGATTAAATGA+TGG 0.511966 4_2:-58520777 Msa0610670:CDS
CAAGGAAGGTTCACGGGTGA+TGG 0.513168 4_2:-58520679 Msa0610670:CDS
AAGGGAAGGGAGAGAAGAGA+CGG 0.513199 4_2:+58525326 None:intergenic
GCTCTAGACATACGTCTCCT+AGG 0.515932 4_2:+58523993 None:intergenic
CTCCATCAACCAACTGCGGA+AGG 0.516261 4_2:-58523077 Msa0610670:CDS
CTTGAGAACAACGATTATAT+GGG 0.516396 4_2:-58523507 Msa0610670:CDS
TGGGTTCTTCTCACCTGAGC+AGG 0.517780 4_2:+58524387 None:intergenic
GACAAAATGCCAAAAGATTG+TGG 0.520977 4_2:-58520303 Msa0610670:CDS
TGAAGAGAGTTCTCATACCA+AGG 0.523096 4_2:-58520697 Msa0610670:CDS
TGAAGAGAGTTCTTGTACCA+AGG 0.523096 4_2:-58520889 Msa0610670:CDS
AGGGATACAATATCCTGCTC+AGG 0.524284 4_2:-58524400 Msa0610670:intron
TGAAACTTCTTGTCACATTG+AGG 0.525546 4_2:-58520211 Msa0610670:CDS
GTCAGAATCTGCTTTATATG+AGG 0.527755 4_2:-58522914 Msa0610670:CDS
CTCATACCAAGGAAGGTTCA+CGG 0.528782 4_2:-58520686 Msa0610670:CDS
AAACAGAAACAATGCACAGA+AGG 0.529404 4_2:-58522512 Msa0610670:CDS
CAGGAAGTGCTTAAATGGAA+TGG 0.530324 4_2:+58523219 None:intergenic
GAGAAGAGAATGTTTCAAGA+AGG 0.530490 4_2:-58524583 Msa0610670:CDS
TGAAGAGAGTTCTCATACCG+AGG 0.530516 4_2:-58521243 Msa0610670:CDS
TCTGGTCCATCATTTAATCC+AGG 0.532393 4_2:+58520771 None:intergenic
AGAAGAGAATGTTTCAAGAA+GGG 0.533139 4_2:-58524582 Msa0610670:CDS
ATCCATCATTTAATTCAGGA+AGG 0.533991 4_2:+58521321 None:intergenic
GGTCATGGAATGCTTGATGA+AGG 0.534269 4_2:-58523918 Msa0610670:CDS
TACTTCAGTTGATGAAGTGA+TGG 0.534655 4_2:-58522473 Msa0610670:CDS
CTATTTCCAATATCAGAAGA+AGG 0.535862 4_2:+58522847 None:intergenic
TACCGAGGGAAGTTCATGTA+TGG 0.537020 4_2:-58521228 Msa0610670:CDS
TACCAAGGAAGGTTCATGTA+TGG 0.538200 4_2:-58520874 Msa0610670:CDS
TCTGATCCATCATTTAATGC+AGG 0.538711 4_2:+58521125 None:intergenic
TCTGAATATTTAGGGAATGC+CGG 0.540667 4_2:-58520252 Msa0610670:CDS
CGGAAGGAATTCAACGAGTA+GGG 0.541736 4_2:-58523061 Msa0610670:CDS
GCCACAGAATTTATCTTCAG+TGG 0.542025 4_2:-58521560 Msa0610670:CDS
ATACGTCTCCTAGGAACCTC+CGG 0.542564 4_2:+58524002 None:intergenic
TATCATACATGAACCATCCT+TGG 0.542898 4_2:+58520488 None:intergenic
ACTCTTCATGCACTAAATGA+TGG 0.544048 4_2:-58520585 Msa0610670:CDS
TTCATCCTCATTGTGTCCCA+AGG 0.544133 4_2:+58522144 None:intergenic
GAGAGTTCTTGTACCAAGGA+AGG 0.545936 4_2:-58520885 Msa0610670:CDS
AGAACATTTGGGGTATATGA+TGG 0.546372 4_2:-58524770 Msa0610670:five_prime_UTR
CTGATATTGGAAATAGTGGC+AGG 0.546936 4_2:-58522840 Msa0610670:CDS
TCTCTCTGGATACTGCAAAT+GGG 0.547137 4_2:-58523578 Msa0610670:CDS
AGCTGCCTGAAGTTTAAGCC+AGG 0.549207 4_2:+58523150 None:intergenic
ATCGTGCAGAATATTCTCCT+TGG 0.549495 4_2:+58523769 None:intergenic
CCAGCTTCGCCTACTGAGTA+CGG 0.550685 4_2:+58523882 None:intergenic
GGACTATAATGTTCATCCCA+TGG 0.550701 4_2:-58522770 Msa0610670:CDS
TTAGAGTTCATGGTGATGGC+AGG 0.551415 4_2:-58523428 Msa0610670:CDS
CCATTAGAGCCGTACTCAGT+AGG 0.551970 4_2:-58523891 Msa0610670:CDS
TTAGGCCTGTTGTAGAAGAC+AGG 0.552979 4_2:+58523300 None:intergenic
CCTTGCCGACCCCACTTGGT+GGG 0.554212 4_2:+58520448 None:intergenic
GGTGAAGACCTAAGAAATAG+TGG 0.554305 4_2:-58523381 Msa0610670:CDS
TCAATTAGTGATAGGTTGAT+GGG 0.554469 4_2:-58523402 Msa0610670:CDS
GCGGAAGGAATTCAACGAGT+AGG 0.555263 4_2:-58523062 Msa0610670:CDS
GTCTTCATTGCAAGAAGCTG+AGG 0.555881 4_2:+58520521 None:intergenic
AGGTAGCAATATCGATCCTA+AGG 0.556717 4_2:-58524436 Msa0610670:CDS
CGAATGGGATATAAGAAGAC+GGG 0.557641 4_2:+58524547 None:intergenic
GAAGACAGGCAGATCGACAT+TGG 0.557940 4_2:+58523314 None:intergenic
ACAATGAGGATGAAAGTTTG+AGG 0.558520 4_2:-58522135 Msa0610670:CDS
GCGTATCCACCTACACTGTA+TGG 0.559286 4_2:+58523471 None:intergenic
AAGGTCTTCTGAGCTTGGAG+TGG 0.559335 4_2:-58523703 Msa0610670:CDS
CATATAATCGTTGTTCTCAA+GGG 0.559394 4_2:+58523509 None:intergenic
ACAACGAGGATGAAAGTTTG+AGG 0.560145 4_2:-58522222 Msa0610670:CDS
TCTTCAGTGGAGGAGAGAAA+GGG 0.562156 4_2:-58521547 Msa0610670:CDS
TCTGACCCATCAAATAATGT+AGG 0.563664 4_2:+58521509 None:intergenic
TTGTTGCGCTGATTGGGTGT+TGG 0.565018 4_2:+58522406 None:intergenic
ACCCTTCCTGAATTAAATGA+TGG 0.565083 4_2:-58521323 Msa0610670:CDS
ACCCATCAAATAATGTAGGA+AGG 0.567596 4_2:+58521513 None:intergenic
GAGAGAAGAGACGGGTTCTG+TGG 0.567875 4_2:+58525335 None:intergenic
GTCCATCATTTAATCCAGGA+AGG 0.568632 4_2:+58520775 None:intergenic
CTCTTCATTGCAAGAAGCCG+AGG 0.572492 4_2:+58521259 None:intergenic
CCCACCAAGTGGGGTCGGCA+AGG 0.572781 4_2:-58520448 Msa0610670:CDS
TGGTAATTATGCATCAAGAC+AGG 0.572791 4_2:+58523789 None:intergenic
ACAACGAGGATGAAAGTTTG+AGG 0.573671 4_2:-58522048 Msa0610670:CDS
GATTATACAAGTGGATATGT+TGG 0.573929 4_2:-58523681 Msa0610670:CDS
CACCATACATGAACTTCCCT+CGG 0.574114 4_2:+58521226 None:intergenic
CTAAGGCATTCACTTTGCTA+GGG 0.575167 4_2:-58524419 Msa0610670:CDS
GAGAGTTCTCATACCAAGGA+AGG 0.576498 4_2:-58520693 Msa0610670:CDS
GAATATTCTGCACGATACAA+TGG 0.576914 4_2:-58523762 Msa0610670:CDS
GACAGCTCTCATACCAAGGA+TGG 0.577808 4_2:-58520501 Msa0610670:CDS
ACATTGGAATCACGTAAACT+AGG 0.581051 4_2:+58523330 None:intergenic
CAAGGAAGGTTCATGTATGG+TGG 0.581118 4_2:-58520871 Msa0610670:CDS
TCATACCAAGGAAGGTTCAC+GGG 0.582696 4_2:-58520685 Msa0610670:CDS
CCAATATCAGAAGAAGGGAT+AGG 0.583349 4_2:+58522853 None:intergenic
ACATCAGAGCAGTACTCAGT+TGG 0.584878 4_2:-58523960 Msa0610670:CDS
AGATTGCTCGGAGAATGTCT+TGG 0.585472 4_2:-58522074 Msa0610670:CDS
TGATTTCAAGCGTCGAAGCA+AGG 0.586627 4_2:-58521900 Msa0610670:CDS
CGAGGGAAGTTCATGTATGG+TGG 0.587426 4_2:-58521225 Msa0610670:CDS
ATCCGTATTTAGATCATCCA+AGG 0.588020 4_2:+58521970 None:intergenic
CTTGGAGTGGATTATACAAG+TGG 0.588668 4_2:-58523690 Msa0610670:CDS
CACCTATGGAAGAGAGGAGG+AGG 0.588736 4_2:+58525283 None:intergenic
AAATGCCTTGGAACACAACA+AGG 0.589651 4_2:-58522320 Msa0610670:CDS
CTCAGGCCATACAGTGTAGG+TGG 0.589803 4_2:-58523477 Msa0610670:CDS
CTTATCCCACCAAGTGGGGT+CGG 0.590183 4_2:-58520453 Msa0610670:CDS
CAGAAACAATGCACAGAAGG+AGG 0.590268 4_2:-58522509 Msa0610670:CDS
CCCATCAAATAATGTAGGAA+GGG 0.590369 4_2:+58521514 None:intergenic
CATACAAAACTCTGGCCAGT+TGG 0.590866 4_2:-58522938 Msa0610670:CDS
TCCATCATTTAATGCAGGAA+AGG 0.592991 4_2:+58521130 None:intergenic
TAGGTTTACCGTAACAATGA+GGG 0.593041 4_2:-58524682 Msa0610670:exon
AGCACTTCCTGTGCAACACA+AGG 0.594010 4_2:-58523207 Msa0610670:CDS
GGATATTCTTGCAATGCCAT+GGG 0.597707 4_2:+58522754 None:intergenic
GATACTGCAAATGGGTATGT+TGG 0.597881 4_2:-58523570 Msa0610670:CDS
TATTTCCAATATCAGAAGAA+GGG 0.599016 4_2:+58522848 None:intergenic
AGGGAATGCATACAAAACTC+TGG 0.600459 4_2:-58522946 Msa0610670:CDS
TGAAGACAGCTCTCATACCA+AGG 0.600471 4_2:-58520505 Msa0610670:CDS
AACCTCCTCCTCTCTTCCAT+AGG 0.600733 4_2:-58525285 Msa0610670:intron
AACATCATCAGAAGGAATGT+CGG 0.601317 4_2:+58523449 None:intergenic
AGTTCTGTATGCACGAGTTG+TGG 0.602337 4_2:+58523036 None:intergenic
ATTTGATGGGTCAGAATGTG+CGG 0.603587 4_2:-58521501 Msa0610670:CDS
AAAAGCAGTATCTCTGAAGA+CGG 0.605385 4_2:-58521195 Msa0610670:CDS
TTAGGTTTACCGTAACAATG+AGG 0.607994 4_2:-58524683 Msa0610670:exon
TCCATCATTTAATTCAGGAA+GGG 0.608308 4_2:+58521322 None:intergenic
ATTGCCTCCAGTCACAGTTG+TGG 0.609147 4_2:+58521946 None:intergenic
TTACGACTTGCATTTAGCAA+TGG 0.609473 4_2:+58521707 None:intergenic
AGGGAAGGGAGAGAAGAGAC+GGG 0.609610 4_2:+58525327 None:intergenic
ACGAATGGGATATAAGAAGA+CGG 0.613207 4_2:+58524546 None:intergenic
TATTGGAAGTGGATGTACAT+TGG 0.613937 4_2:-58521672 Msa0610670:CDS
CAAGCCTTATCCCACCAAGT+GGG 0.615163 4_2:-58520458 Msa0610670:CDS
AAGTGATGGAAATGGTTCGT+CGG 0.619342 4_2:-58522459 Msa0610670:CDS
AGAAGCAGCATCTCTGGAGA+AGG 0.620850 4_2:-58521387 Msa0610670:CDS
TTCGTCGGAGTCAAAGCCAC+CGG 0.622611 4_2:-58522444 Msa0610670:CDS
ACAGAATTTATCTTCAGTGG+AGG 0.623986 4_2:-58521557 Msa0610670:CDS
ACCTAAGAAATAGTGGTCAG+AGG 0.626596 4_2:-58523374 Msa0610670:CDS
AACTCAAAGACAAATACAGA+TGG 0.626859 4_2:-58523017 Msa0610670:CDS
AAACTCAAGTCACCAGTCAG+AGG 0.627950 4_2:-58522279 Msa0610670:CDS
TTCAAGGCTACTTCTAAGGG+AGG 0.630188 4_2:-58524456 Msa0610670:CDS
GAAGAGAGTTCTCATACCGA+GGG 0.630928 4_2:-58521242 Msa0610670:CDS
GGATACGATATGGGATGTCA+TGG 0.631953 4_2:-58522625 Msa0610670:CDS
AACCACAACAACAATGCTCG+CGG 0.637953 4_2:-58524651 Msa0610670:CDS
GCTAGTGTTATATCATGACT+CGG 0.641441 4_2:+58522733 None:intergenic
ATAACACTAGCAATGAACAA+TGG 0.642971 4_2:-58522721 Msa0610670:CDS
TCCACTGAAGATAAATTCTG+TGG 0.643618 4_2:+58521559 None:intergenic
TCCATCATTTAATCCAGGAA+GGG 0.647205 4_2:+58520776 None:intergenic
AAATTATCCCAATTTGCCAG+AGG 0.648990 4_2:+58522679 None:intergenic
AAGCCTTATCCCACCAAGTG+GGG 0.649098 4_2:-58520457 Msa0610670:CDS
TGAACTCTAACATCATCAGA+AGG 0.649743 4_2:+58523441 None:intergenic
AAATGCCTTGGGACACAATG+AGG 0.654400 4_2:-58522149 Msa0610670:CDS
TACACGCACCTATGGAAGAG+AGG 0.655936 4_2:+58525277 None:intergenic
GATGTTAGAGTTCATGGTGA+TGG 0.658181 4_2:-58523432 Msa0610670:CDS
AAATGATGGATCAGAATGTG+CGG 0.658186 4_2:-58521309 Msa0610670:CDS
CATCTCAGGCCATACAGTGT+AGG 0.659620 4_2:-58523480 Msa0610670:CDS
CCAAGCCTTATCCCACCAAG+TGG 0.661248 4_2:-58520459 Msa0610670:CDS
GTCTTGATGCATAATTACCA+AGG 0.664929 4_2:-58523786 Msa0610670:CDS
CATGAACAAGTTAGAACCGG+AGG 0.666115 4_2:-58524018 Msa0610670:CDS
AAATGATGGATCAGAATGTG+CGG 0.667244 4_2:-58520571 Msa0610670:CDS
AAATGATGGATCAGAATGTG+CGG 0.667244 4_2:-58521117 Msa0610670:CDS
TCAAGCGTCGAAGCAAGGTG+AGG 0.674009 4_2:-58521895 Msa0610670:CDS
AAATGATGGACCAGAATGTG+TGG 0.675680 4_2:-58520763 Msa0610670:CDS
CTTTCTCCATCAACCAACTG+CGG 0.679533 4_2:-58523081 Msa0610670:CDS
AAATGCCTTGGAACACAACG+AGG 0.681465 4_2:-58522236 Msa0610670:CDS
AATTGATGGACCGGAATGTG+TGG 0.682298 4_2:-58520955 Msa0610670:CDS
GAATGTCTTGGAACACAACG+AGG 0.690050 4_2:-58522062 Msa0610670:CDS
GATTCCACAACTGTGACTGG+AGG 0.694621 4_2:-58521950 Msa0610670:CDS
ACGCACCTATGGAAGAGAGG+AGG 0.698688 4_2:+58525280 None:intergenic
TGTATTGTATGGTAGCAACA+GGG 0.699914 4_2:-58522965 Msa0610670:CDS
TCAAACGTGAAGAACATTTG+GGG 0.710804 4_2:-58524780 Msa0610670:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAGGATTAATAATA+AGG + chr4_2:58520356-58520375 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGTAAC+CGG - chr4_2:58520522-58520541 Msa0610670:CDS 10.0%
!!! TTGATTAATTACTGATTAAT+AGG - chr4_2:58520744-58520763 Msa0610670:CDS 15.0%
!! TAATAATAAGGAAAAGAATG+CGG + chr4_2:58520344-58520363 None:intergenic 20.0%
!! AGTATTAGTATAGAATCTTT+AGG - chr4_2:58520846-58520865 Msa0610670:CDS 20.0%
!! AAATAAAAACAAAGCCATAT+CGG + chr4_2:58521041-58521060 None:intergenic 20.0%
!! AATTATAGAATGAAGTAACT+GGG + chr4_2:58521182-58521201 None:intergenic 20.0%
!! AAATTATAGAATGAAGTAAC+TGG + chr4_2:58521183-58521202 None:intergenic 20.0%
!!! AAATGTGAAAGATTTTCAAA+AGG - chr4_2:58521436-58521455 Msa0610670:CDS 20.0%
!! TGATAATCACAAATCATATT+TGG - chr4_2:58522756-58522775 Msa0610670:CDS 20.0%
!!! AACACACTACTTTTTTTATT+TGG + chr4_2:58522976-58522995 None:intergenic 20.0%
!! CATAATCGAAATCGTATTTT+AGG - chr4_2:58520598-58520617 Msa0610670:CDS 25.0%
! AATAAAAACAAAGCCATATC+GGG + chr4_2:58521040-58521059 None:intergenic 25.0%
! TCAGCTAAAGTAAACAAAAA+TGG + chr4_2:58521246-58521265 None:intergenic 25.0%
!! TTTTAGTAAGCAAACAAAGA+AGG - chr4_2:58521825-58521844 Msa0610670:CDS 25.0%
!! AAAGAACTTTGCTCTAAATT+AGG + chr4_2:58522268-58522287 None:intergenic 25.0%
!! TAATTTAGAGCAAAGTTCTT+TGG - chr4_2:58522267-58522286 Msa0610670:CDS 25.0%
! CCATTATTAATTCCAAAAGA+TGG + chr4_2:58522424-58522443 None:intergenic 25.0%
!!! CCATCTTTTGGAATTAATAA+TGG - chr4_2:58522421-58522440 Msa0610670:CDS 25.0%
! TTTCCAAATTCTGTATTGTA+TGG - chr4_2:58522571-58522590 Msa0610670:CDS 25.0%
! TATTTCCAATATCAGAAGAA+GGG + chr4_2:58522702-58522721 None:intergenic 25.0%
! TTATCAAACAGTGAAGAAAA+TGG + chr4_2:58522742-58522761 None:intergenic 25.0%
!!! CACTACTTTTTTTATTTGGA+TGG + chr4_2:58522972-58522991 None:intergenic 25.0%
! TCAAATCAGTAGTTTGAAAA+AGG - chr4_2:58523356-58523375 Msa0610670:CDS 25.0%
! TAAAAAGAGTGAGAATTTGT+TGG - chr4_2:58523713-58523732 Msa0610670:CDS 25.0%
! CGTAATCATAAAGATGTTAT+TGG - chr4_2:58523858-58523877 Msa0610670:CDS 25.0%
!! TTTTAACATCATAATCACAC+TGG + chr4_2:58523905-58523924 None:intergenic 25.0%
! GGATAATAAAAATCACCAAA+AGG - chr4_2:58524067-58524086 Msa0610670:intron 25.0%
! TAATGTAAAATCAGCATCTT+TGG - chr4_2:58525141-58525160 Msa0610670:intron 25.0%
!!! AAAGATGGTTCTGAATATTT+AGG - chr4_2:58525286-58525305 Msa0610670:five_prime_UTR 25.0%
!!! AAGATGGTTCTGAATATTTA+GGG - chr4_2:58525287-58525306 Msa0610670:five_prime_UTR 25.0%
AAAGTGTAAAGCAGCATAAT+CGG + chr4_2:58520422-58520441 None:intergenic 30.0%
ACTGTAAATATTCAAAACGC+CGG + chr4_2:58520544-58520563 None:intergenic 30.0%
! AGGTCAAATTTGTTTCAACT+AGG - chr4_2:58520618-58520637 Msa0610670:CDS 30.0%
AGAAGAGAATGTTTCAAGAA+GGG - chr4_2:58520965-58520984 Msa0610670:CDS 30.0%
TATGAGAAGAAACTACTTCA+TGG - chr4_2:58521064-58521083 Msa0610670:CDS 30.0%
!! TCGAAATATCTTTTCAGGAA+GGG + chr4_2:58521322-58521341 None:intergenic 30.0%
! CAGCTAACAAGTTTAACTTT+GGG - chr4_2:58521367-58521386 Msa0610670:CDS 30.0%
! ATTTTTGAACTGTTCTTTGC+AGG - chr4_2:58521481-58521500 Msa0610670:CDS 30.0%
! TGTTCAAAATGACAGAGTTT+TGG - chr4_2:58521721-58521740 Msa0610670:CDS 30.0%
! GTTCAAAATGACAGAGTTTT+GGG - chr4_2:58521722-58521741 Msa0610670:CDS 30.0%
GATTATACAAGTGGATATGT+TGG - chr4_2:58521866-58521885 Msa0610670:CDS 30.0%
CATATAATCGTTGTTCTCAA+GGG + chr4_2:58522041-58522060 None:intergenic 30.0%
CTTGAGAACAACGATTATAT+GGG - chr4_2:58522040-58522059 Msa0610670:CDS 30.0%
! ATCAATTAGTGATAGGTTGA+TGG - chr4_2:58522144-58522163 Msa0610670:CDS 30.0%
!! TCAATTAGTGATAGGTTGAT+GGG - chr4_2:58522145-58522164 Msa0610670:CDS 30.0%
AACTCAAAGACAAATACAGA+TGG - chr4_2:58522530-58522549 Msa0610670:CDS 30.0%
AAATACAGATGGCACAATAT+TGG - chr4_2:58522541-58522560 Msa0610670:CDS 30.0%
CTACCATACAATACAGAATT+TGG + chr4_2:58522577-58522596 None:intergenic 30.0%
CTATTTCCAATATCAGAAGA+AGG + chr4_2:58522703-58522722 None:intergenic 30.0%
TCTTCTGATATTGGAAATAG+TGG - chr4_2:58522703-58522722 Msa0610670:CDS 30.0%
ATAACACTAGCAATGAACAA+TGG - chr4_2:58522826-58522845 Msa0610670:CDS 30.0%
AGTCCAATATGATGATTCAT+TGG - chr4_2:58522894-58522913 Msa0610670:CDS 30.0%
GATCCAATGAATCATCATAT+TGG + chr4_2:58522900-58522919 None:intergenic 30.0%
TATGATGATTCATTGGATCA+TGG - chr4_2:58522901-58522920 Msa0610670:CDS 30.0%
GATTCTCAAAATAGCAATCA+TGG - chr4_2:58522946-58522965 Msa0610670:CDS 30.0%
!! TTGGTTTTCTTTTTGTCAAC+CGG + chr4_2:58523125-58523144 None:intergenic 30.0%
ACAACTTTGGTTGTTGTATT+AGG + chr4_2:58523627-58523646 None:intergenic 30.0%
ATGCACTCTTGTTGAAATTT+GGG + chr4_2:58523770-58523789 None:intergenic 30.0%
GAAGACAAAGACATTAATCT+TGG - chr4_2:58523795-58523814 Msa0610670:CDS 30.0%
CATAAAGATGTTATTGGAAG+TGG - chr4_2:58523864-58523883 Msa0610670:CDS 30.0%
TGTCAAGAAAAAGCAAATGT+TGG - chr4_2:58524200-58524219 Msa0610670:CDS 30.0%
TCCATCATTTAATTCAGGAA+GGG + chr4_2:58524228-58524247 None:intergenic 30.0%
ATCCATCATTTAATTCAGGA+AGG + chr4_2:58524229-58524248 None:intergenic 30.0%
TCTGATCCATCATTTAATTC+AGG + chr4_2:58524233-58524252 None:intergenic 30.0%
ACTGTTCATGCATTAATTGA+TGG - chr4_2:58524578-58524597 Msa0610670:CDS 30.0%
!! TTTTTGTTATCCACACATTC+TGG + chr4_2:58524797-58524816 None:intergenic 30.0%
TCTCAAGAAAAAGCAAATGT+TGG - chr4_2:58524938-58524957 Msa0610670:intron 30.0%
GGATAACAAAAATCACCAAA+AGG - chr4_2:58524997-58525016 Msa0610670:intron 30.0%
! ATCTTTTGGCATTTTGTCAT+TGG + chr4_2:58525242-58525261 None:intergenic 30.0%
AATAGTGTGTGATTAAGCGA+TGG + chr4_2:58520320-58520339 None:intergenic 35.0%
GTCAAACGTGAAGAACATTT+GGG - chr4_2:58520766-58520785 Msa0610670:CDS 35.0%
TCAAACGTGAAGAACATTTG+GGG - chr4_2:58520767-58520786 Msa0610670:CDS 35.0%
! AGAACATTTGGGGTATATGA+TGG - chr4_2:58520777-58520796 Msa0610670:CDS 35.0%
TTAGGTTTACCGTAACAATG+AGG - chr4_2:58520864-58520883 Msa0610670:CDS 35.0%
TAGGTTTACCGTAACAATGA+GGG - chr4_2:58520865-58520884 Msa0610670:CDS 35.0%
ATCATTGACCCTCATTGTTA+CGG + chr4_2:58520876-58520895 None:intergenic 35.0%
ATAAAGATTGCACCGAAAAC+CGG + chr4_2:58520929-58520948 None:intergenic 35.0%
GAGAAGAGAATGTTTCAAGA+AGG - chr4_2:58520964-58520983 Msa0610670:CDS 35.0%
TGTTTCAAGAAGGGATTGTT+TGG - chr4_2:58520974-58520993 Msa0610670:CDS 35.0%
GTTTCAAGAAGGGATTGTTT+GGG - chr4_2:58520975-58520994 Msa0610670:CDS 35.0%
ACGAATGGGATATAAGAAGA+CGG + chr4_2:58521004-58521023 None:intergenic 35.0%
GCATAATCTTCTCTACGAAT+GGG + chr4_2:58521018-58521037 None:intergenic 35.0%
! ACTACTTCATGGTGTTTTCA+AGG - chr4_2:58521075-58521094 Msa0610670:CDS 35.0%
!! TGTTTTCAAGGCTACTTCTA+AGG - chr4_2:58521087-58521106 Msa0610670:CDS 35.0%
!! GTTTTCAAGGCTACTTCTAA+GGG - chr4_2:58521088-58521107 Msa0610670:CDS 35.0%
TACCATTGATCTTCTGCTTT+AGG - chr4_2:58521266-58521285 Msa0610670:CDS 35.0%
AACCTAAAGCAGAAGATCAA+TGG + chr4_2:58521271-58521290 None:intergenic 35.0%
AGGTTAAGTTCACTGAGATT+TGG - chr4_2:58521286-58521305 Msa0610670:CDS 35.0%
!! CGAAATATCTTTTCAGGAAG+GGG + chr4_2:58521321-58521340 None:intergenic 35.0%
!! CTCGAAATATCTTTTCAGGA+AGG + chr4_2:58521323-58521342 None:intergenic 35.0%
! GCATCTCGAAATATCTTTTC+AGG + chr4_2:58521327-58521346 None:intergenic 35.0%
! GCAGCTAACAAGTTTAACTT+TGG - chr4_2:58521366-58521385 Msa0610670:CDS 35.0%
! AAGTTTAACTTTGGGCTATC+TGG - chr4_2:58521375-58521394 Msa0610670:CDS 35.0%
TGGTAATTATGCATCAAGAC+AGG + chr4_2:58521761-58521780 None:intergenic 35.0%
GTCTTGATGCATAATTACCA+AGG - chr4_2:58521761-58521780 Msa0610670:CDS 35.0%
GAATATTCTGCACGATACAA+TGG - chr4_2:58521785-58521804 Msa0610670:CDS 35.0%
TGCCATTAAAAGATGAAAGC+AGG - chr4_2:58521897-58521916 Msa0610670:CDS 35.0%
! AGCCTGCTTTCATCTTTTAA+TGG + chr4_2:58521902-58521921 None:intergenic 35.0%
!! TGGGTATGTTGGTGATTATT+TGG - chr4_2:58521988-58522007 Msa0610670:CDS 35.0%
CCATATAATCGTTGTTCTCA+AGG + chr4_2:58522042-58522061 None:intergenic 35.0%
CCTTGAGAACAACGATTATA+TGG - chr4_2:58522039-58522058 Msa0610670:CDS 35.0%
AACATCATCAGAAGGAATGT+CGG + chr4_2:58522101-58522120 None:intergenic 35.0%
TGAACTCTAACATCATCAGA+AGG + chr4_2:58522109-58522128 None:intergenic 35.0%
! TCTGATGATGTTAGAGTTCA+TGG - chr4_2:58522109-58522128 Msa0610670:CDS 35.0%
! TGGTCAGAGGATGATATTTT+CGG - chr4_2:58522186-58522205 Msa0610670:CDS 35.0%
ACATTGGAATCACGTAAACT+AGG + chr4_2:58522220-58522239 None:intergenic 35.0%
!! AGGAAGTGCTTAAATGGAAT+GGG + chr4_2:58522330-58522349 None:intergenic 35.0%
TGTATTGTATGGTAGCAACA+GGG - chr4_2:58522582-58522601 Msa0610670:CDS 35.0%
GTCAGAATCTGCTTTATATG+AGG - chr4_2:58522633-58522652 Msa0610670:CDS 35.0%
GCTAGTGTTATATCATGACT+CGG + chr4_2:58522817-58522836 None:intergenic 35.0%
! ATTAAGTTCTGATGTTCCTC+TGG - chr4_2:58522852-58522871 Msa0610670:CDS 35.0%
AAATTATCCCAATTTGCCAG+AGG + chr4_2:58522871-58522890 None:intergenic 35.0%
ATTGGATCATGGATACGATA+TGG - chr4_2:58522912-58522931 Msa0610670:CDS 35.0%
TTGGATCATGGATACGATAT+GGG - chr4_2:58522913-58522932 Msa0610670:CDS 35.0%
ATGCACGTGATGTTAACAAA+CGG - chr4_2:58523010-58523029 Msa0610670:CDS 35.0%
AAACAGAAACAATGCACAGA+AGG - chr4_2:58523035-58523054 Msa0610670:CDS 35.0%
CACTTCATCAACTGAAGTAA+TGG + chr4_2:58523073-58523092 None:intergenic 35.0%
!! TACTTCAGTTGATGAAGTGA+TGG - chr4_2:58523074-58523093 Msa0610670:CDS 35.0%
!! AGTTGATGAAGTGATGGAAA+TGG - chr4_2:58523080-58523099 Msa0610670:CDS 35.0%
GCAACAATACTGAAAGTTTG+AGG - chr4_2:58523157-58523176 Msa0610670:CDS 35.0%
!! TGATTGCTTTGAAAATGCCT+TGG - chr4_2:58523215-58523234 Msa0610670:CDS 35.0%
ACAACAAGGATGAAAGCTTA+AGG - chr4_2:58523241-58523260 Msa0610670:CDS 35.0%
! AGATCTCTTTGAAAATGCCT+TGG - chr4_2:58523299-58523318 Msa0610670:CDS 35.0%
ACAATGAGGATGAAAGTTTG+AGG - chr4_2:58523412-58523431 Msa0610670:CDS 35.0%
GATGAAAGTTTGAGGAAGAA+AGG - chr4_2:58523420-58523439 Msa0610670:CDS 35.0%
AACGAAGAAAAGAGATTGCT+CGG - chr4_2:58523461-58523480 Msa0610670:CDS 35.0%
CTTCTTCTTCTTCATACTAC+AGG + chr4_2:58523538-58523557 None:intergenic 35.0%
!! AGATTGCTTTGAAAATGCCT+TGG - chr4_2:58523560-58523579 Msa0610670:CDS 35.0%
TGCCTTGGATGATCTAAATA+CGG - chr4_2:58523575-58523594 Msa0610670:CDS 35.0%
ATCCGTATTTAGATCATCCA+AGG + chr4_2:58523580-58523599 None:intergenic 35.0%
ACGCTTGAAATCAACAACTT+TGG + chr4_2:58523640-58523659 None:intergenic 35.0%
! CTCACTCTTTTTACTCTCAT+TGG + chr4_2:58523706-58523725 None:intergenic 35.0%
!! AAGAGTGAGAATTTGTTGGT+TGG - chr4_2:58523717-58523736 Msa0610670:CDS 35.0%
!! AGAGTGAGAATTTGTTGGTT+GGG - chr4_2:58523718-58523737 Msa0610670:CDS 35.0%
GATGCACTCTTGTTGAAATT+TGG + chr4_2:58523771-58523790 None:intergenic 35.0%
GACAAAGACATTAATCTTGG+CGG - chr4_2:58523798-58523817 Msa0610670:CDS 35.0%
TTACGACTTGCATTTAGCAA+TGG + chr4_2:58523843-58523862 None:intergenic 35.0%
TATTGGAAGTGGATGTACAT+TGG - chr4_2:58523875-58523894 Msa0610670:CDS 35.0%
TCCACTGAAGATAAATTCTG+TGG + chr4_2:58523991-58524010 None:intergenic 35.0%
ACAGAATTTATCTTCAGTGG+AGG - chr4_2:58523990-58524009 Msa0610670:CDS 35.0%
CCCATCAAATAATGTAGGAA+GGG + chr4_2:58524036-58524055 None:intergenic 35.0%
CCCTTCCTACATTATTTGAT+GGG - chr4_2:58524033-58524052 Msa0610670:CDS 35.0%
ACCCATCAAATAATGTAGGA+AGG + chr4_2:58524037-58524056 None:intergenic 35.0%
TCTGACCCATCAAATAATGT+AGG + chr4_2:58524041-58524060 None:intergenic 35.0%
! AAGCTGAGAACAAAACCTTT+TGG + chr4_2:58524085-58524104 None:intergenic 35.0%
! TGACGAGAGTTTTCATAACA+AGG - chr4_2:58524112-58524131 Msa0610670:intron 35.0%
! GAGAGTTTTCATAACAAGGA+AGG - chr4_2:58524116-58524135 Msa0610670:intron 35.0%
ACCCTTCCTGAATTAAATGA+TGG - chr4_2:58524224-58524243 Msa0610670:CDS 35.0%
!! AAATGATGGATCAGAATGTG+CGG - chr4_2:58524238-58524257 Msa0610670:CDS 35.0%
! AAAAGCAGTATCTCTGAAGA+CGG - chr4_2:58524352-58524371 Msa0610670:intron 35.0%
ACCTTTCCTGCATTAAATGA+TGG - chr4_2:58524416-58524435 Msa0610670:CDS 35.0%
TCCATCATTTAATGCAGGAA+AGG + chr4_2:58524420-58524439 None:intergenic 35.0%
TCTGATCCATCATTTAATGC+AGG + chr4_2:58524425-58524444 None:intergenic 35.0%
!! AAATGATGGATCAGAATGTG+CGG - chr4_2:58524238-58524257 Msa0610670:CDS 35.0%
GGATAGCAAAAATGACCAAA+AGG - chr4_2:58524451-58524470 Msa0610670:CDS 35.0%
! AAGCTGAGAACAAAACCTTT+TGG + chr4_2:58524085-58524104 None:intergenic 35.0%
! AAAAGTAGCATCTCTGAAGA+TGG - chr4_2:58524514-58524533 Msa0610670:CDS 35.0%
! TCATGCATTAATTGATGGAC+CGG - chr4_2:58524583-58524602 Msa0610670:CDS 35.0%
! TTTTTGTCATCCACACATTC+CGG + chr4_2:58524605-58524624 None:intergenic 35.0%
GGATGACAAAAATCACCAAA+AGG - chr4_2:58524613-58524632 Msa0610670:CDS 35.0%
! AAGCTGAAGACAAAACCTTT+TGG + chr4_2:58524631-58524650 None:intergenic 35.0%
TCCATCATTTAATCCAGGAA+GGG + chr4_2:58524774-58524793 None:intergenic 35.0%
GGATAACAAAAACCACCAAA+AGG - chr4_2:58524805-58524824 Msa0610670:intron 35.0%
TCTTCATTCCAAGTAGTTGA+GGG + chr4_2:58524836-58524855 None:intergenic 35.0%
ACTCTTCATGCACTAAATGA+TGG - chr4_2:58524962-58524981 Msa0610670:intron 35.0%
!! AAATGATGGATCAGAATGTG+CGG - chr4_2:58524238-58524257 Msa0610670:CDS 35.0%
TATCATACATGAACCATCCT+TGG + chr4_2:58525062-58525081 None:intergenic 35.0%
GACAAAATGCCAAAAGATTG+TGG - chr4_2:58525244-58525263 Msa0610670:intron 35.0%
! ATCTTTAGCTTCAATGGAGA+AGG + chr4_2:58525272-58525291 None:intergenic 35.0%
TTCTCCATTGAAGCTAAAGA+TGG - chr4_2:58525271-58525290 Msa0610670:intron 35.0%
! AGAACCATCTTTAGCTTCAA+TGG + chr4_2:58525278-58525297 None:intergenic 35.0%
TCTGAATATTTAGGGAATGC+CGG - chr4_2:58525295-58525314 Msa0610670:five_prime_UTR 35.0%
!! AACTGGAGCATTTTCATTAC+CGG + chr4_2:58525317-58525336 None:intergenic 35.0%
ATGTGACAAGAAGTTTCAAC+TGG + chr4_2:58525334-58525353 None:intergenic 35.0%
TGAAACTTCTTGTCACATTG+AGG - chr4_2:58525336-58525355 Msa0610670:five_prime_UTR 35.0%
GAAAAAGAAGAAGAGAGCGA+AGG + chr4_2:58520296-58520315 None:intergenic 40.0%
GTAAAGCAGCATAATCGGAA+CGG + chr4_2:58520417-58520436 None:intergenic 40.0%
GGTCAAACGTGAAGAACATT+TGG - chr4_2:58520765-58520784 Msa0610670:CDS 40.0%
CGAATGGGATATAAGAAGAC+GGG + chr4_2:58521003-58521022 None:intergenic 40.0%
GGCATAATCTTCTCTACGAA+TGG + chr4_2:58521019-58521038 None:intergenic 40.0%
AGAGAAGATTATGCCCGATA+TGG - chr4_2:58521024-58521043 Msa0610670:CDS 40.0%
AGGTAGCAATATCGATCCTA+AGG - chr4_2:58521111-58521130 Msa0610670:CDS 40.0%
! CTAAGGCATTCACTTTGCTA+GGG - chr4_2:58521128-58521147 Msa0610670:CDS 40.0%
CGACATGAACAAGTTAGAAC+CGG - chr4_2:58521526-58521545 Msa0610670:CDS 40.0%
! GTTGGAAGATCTTTTGGTCA+TGG - chr4_2:58521614-58521633 Msa0610670:CDS 40.0%
ATCGTGCAGAATATTCTCCT+TGG + chr4_2:58521781-58521800 None:intergenic 40.0%
!! CTTGGAGTGGATTATACAAG+TGG - chr4_2:58521857-58521876 Msa0610670:CDS 40.0%
TCTCTCTGGATACTGCAAAT+GGG - chr4_2:58521969-58521988 Msa0610670:CDS 40.0%
GATACTGCAAATGGGTATGT+TGG - chr4_2:58521977-58521996 Msa0610670:CDS 40.0%
ATTATATGGGCACACATCTC+AGG - chr4_2:58522053-58522072 Msa0610670:CDS 40.0%
GATGTTAGAGTTCATGGTGA+TGG - chr4_2:58522115-58522134 Msa0610670:CDS 40.0%
GCAGGTCATCAATTAGTGAT+AGG - chr4_2:58522137-58522156 Msa0610670:CDS 40.0%
GGTGAAGACCTAAGAAATAG+TGG - chr4_2:58522166-58522185 Msa0610670:CDS 40.0%
ACCTAAGAAATAGTGGTCAG+AGG - chr4_2:58522173-58522192 Msa0610670:CDS 40.0%
! TCCTCTGACCACTATTTCTT+AGG + chr4_2:58522177-58522196 None:intergenic 40.0%
!! CAGGAAGTGCTTAAATGGAA+TGG + chr4_2:58522331-58522350 None:intergenic 40.0%
!! TTGCACAGGAAGTGCTTAAA+TGG + chr4_2:58522336-58522355 None:intergenic 40.0%
CTGTATTGTATGGTAGCAAC+AGG - chr4_2:58522581-58522600 Msa0610670:CDS 40.0%
AGGGAATGCATACAAAACTC+TGG - chr4_2:58522601-58522620 Msa0610670:CDS 40.0%
CCAATATCAGAAGAAGGGAT+AGG + chr4_2:58522697-58522716 None:intergenic 40.0%
CCTATCCCTTCTTCTGATAT+TGG - chr4_2:58522694-58522713 Msa0610670:CDS 40.0%
CTGATATTGGAAATAGTGGC+AGG - chr4_2:58522707-58522726 Msa0610670:CDS 40.0%
GGACTATAATGTTCATCCCA+TGG - chr4_2:58522777-58522796 Msa0610670:CDS 40.0%
GGATATTCTTGCAATGCCAT+GGG + chr4_2:58522796-58522815 None:intergenic 40.0%
TGATGTTCCTCTGGCAAATT+GGG - chr4_2:58522861-58522880 Msa0610670:CDS 40.0%
TGCACGTGATGTTAACAAAC+GGG - chr4_2:58523011-58523030 Msa0610670:CDS 40.0%
AATGCACAGAAGGAGGAATA+TGG - chr4_2:58523045-58523064 Msa0610670:CDS 40.0%
! AAGTGATGGAAATGGTTCGT+CGG - chr4_2:58523088-58523107 Msa0610670:CDS 40.0%
! GTTTTCTTTTTGTCAACCGG+TGG + chr4_2:58523122-58523141 None:intergenic 40.0%
!! TCAGTATTGTTGCGCTGATT+GGG + chr4_2:58523150-58523169 None:intergenic 40.0%
! TTCAGTATTGTTGCGCTGAT+TGG + chr4_2:58523151-58523170 None:intergenic 40.0%
AAATGCCTTGGAACACAACA+AGG - chr4_2:58523227-58523246 Msa0610670:CDS 40.0%
! TTCATCCTTGTTGTGTTCCA+AGG + chr4_2:58523235-58523254 None:intergenic 40.0%
ACAACGAGGATGAAAGTTTG+AGG - chr4_2:58523325-58523344 Msa0610670:CDS 40.0%
!! AGATTGCTCTGAAAATGCCT+TGG - chr4_2:58523386-58523405 Msa0610670:CDS 40.0%
!! GATTGCTCTGAAAATGCCTT+GGG - chr4_2:58523387-58523406 Msa0610670:CDS 40.0%
ACAACGAGGATGAAAGTTTG+AGG - chr4_2:58523325-58523344 Msa0610670:CDS 40.0%
GCCACAGAATTTATCTTCAG+TGG - chr4_2:58523987-58524006 Msa0610670:CDS 40.0%
GCCCTTCCTACATTATTTGA+TGG - chr4_2:58524032-58524051 Msa0610670:CDS 40.0%
! ATTTGATGGGTCAGAATGTG+CGG - chr4_2:58524046-58524065 Msa0610670:CDS 40.0%
CAAGGAAGGTTCATGTATGA+TGG - chr4_2:58524130-58524149 Msa0610670:intron 40.0%
TAATGTAGAAGCAGCATCTC+TGG - chr4_2:58524154-58524173 Msa0610670:intron 40.0%
! TCACCAGAAGTTTTTGTCCT+CGG - chr4_2:58524271-58524290 Msa0610670:intron 40.0%
TGTCAACAAAAAGCAAACGC+TGG - chr4_2:58524392-58524411 Msa0610670:intron 40.0%
TGAAGAGAGTTCTTGTACCA+AGG - chr4_2:58524658-58524677 Msa0610670:CDS 40.0%
TACCAAGGAAGGTTCATGTA+TGG - chr4_2:58524673-58524692 Msa0610670:exon 40.0%
ACCCTTCCTGGATTAAATGA+TGG - chr4_2:58524770-58524789 Msa0610670:five_prime_UTR 40.0%
GTCCATCATTTAATCCAGGA+AGG + chr4_2:58524775-58524794 None:intergenic 40.0%
TCTGGTCCATCATTTAATCC+AGG + chr4_2:58524779-58524798 None:intergenic 40.0%
!! AAATGATGGACCAGAATGTG+TGG - chr4_2:58524784-58524803 Msa0610670:five_prime_UTR 40.0%
CTCTTCATTCCAAGTAGTTG+AGG + chr4_2:58524837-58524856 None:intergenic 40.0%
TGAAGAGAGTTCTCATACCA+AGG - chr4_2:58524850-58524869 Msa0610670:intron 40.0%
! AAGCTGAGGACAAAACCTTT+TGG + chr4_2:58525015-58525034 None:intergenic 40.0%
CAAGGAAGGTTCATGTATGA+TGG - chr4_2:58524130-58524149 Msa0610670:intron 40.0%
!!! AGGTTTTAGGTTTGGTGAGC+GGG + chr4_2:58520247-58520266 None:intergenic 45.0%
!!! GAGGTTTTAGGTTTGGTGAG+CGG + chr4_2:58520248-58520267 None:intergenic 45.0%
!!! AGAGGAGGAGGTTTTAGGTT+TGG + chr4_2:58520255-58520274 None:intergenic 45.0%
TTGTTCCGATCATTCTCTGC+TGG - chr4_2:58520494-58520513 Msa0610670:CDS 45.0%
CTACACCAGCAGAGAATGAT+CGG + chr4_2:58520502-58520521 None:intergenic 45.0%
AACCACAACAACAATGCTCG+CGG - chr4_2:58520896-58520915 Msa0610670:CDS 45.0%
! TTCAAGGCTACTTCTAAGGG+AGG - chr4_2:58521091-58521110 Msa0610670:CDS 45.0%
CCTAGCAAAGTGAATGCCTT+AGG + chr4_2:58521130-58521149 None:intergenic 45.0%
! CCTAAGGCATTCACTTTGCT+AGG - chr4_2:58521127-58521146 Msa0610670:CDS 45.0%
AGGGATACAATATCCTGCTC+AGG - chr4_2:58521147-58521166 Msa0610670:CDS 45.0%
GGTATGCGCTTGTACATGAT+TGG - chr4_2:58521404-58521423 Msa0610670:CDS 45.0%
CATGAACAAGTTAGAACCGG+AGG - chr4_2:58521529-58521548 Msa0610670:CDS 45.0%
ACATCAGAGCAGTACTCAGT+TGG - chr4_2:58521587-58521606 Msa0610670:CDS 45.0%
! GGCGAAGTTGGAAGATCTTT+TGG - chr4_2:58521608-58521627 Msa0610670:CDS 45.0%
GGTCATGGAATGCTTGATGA+AGG - chr4_2:58521629-58521648 Msa0610670:CDS 45.0%
! GCTGGAAGATCTTTTGGTCA+TGG - chr4_2:58521683-58521702 Msa0610670:CDS 45.0%
CAAAGAAGGTCTTCTGAGCT+TGG - chr4_2:58521839-58521858 Msa0610670:CDS 45.0%
TGCAGTATCCAGAGAGAGTT+TGG + chr4_2:58521966-58521985 None:intergenic 45.0%
CTCTCTCTGGATACTGCAAA+TGG - chr4_2:58521968-58521987 Msa0610670:CDS 45.0%
TGGCAAGAAAAGATGACAGC+AGG - chr4_2:58522008-58522027 Msa0610670:CDS 45.0%
!! TTAGAGTTCATGGTGATGGC+AGG - chr4_2:58522119-58522138 Msa0610670:CDS 45.0%
ATCTGCCTGTCTTCTACAAC+AGG - chr4_2:58522242-58522261 Msa0610670:CDS 45.0%
TTAGGCCTGTTGTAGAAGAC+AGG + chr4_2:58522250-58522269 None:intergenic 45.0%
CTGTATGATTCAGATGCTCC+TGG - chr4_2:58522379-58522398 Msa0610670:CDS 45.0%
ATGCTCCTGGCTTAAACTTC+AGG - chr4_2:58522392-58522411 Msa0610670:CDS 45.0%
! TTCAGGCAGCTACCATCTTT+TGG - chr4_2:58522409-58522428 Msa0610670:CDS 45.0%
CTTTCTCCATCAACCAACTG+CGG - chr4_2:58522466-58522485 Msa0610670:CDS 45.0%
CGGAAGGAATTCAACGAGTA+GGG - chr4_2:58522486-58522505 Msa0610670:CDS 45.0%
AGTTCTGTATGCACGAGTTG+TGG + chr4_2:58522514-58522533 None:intergenic 45.0%
CATACAAAACTCTGGCCAGT+TGG - chr4_2:58522609-58522628 Msa0610670:CDS 45.0%
AGGAGCTGACGAAGACTTTA+AGG + chr4_2:58522677-58522696 None:intergenic 45.0%
CGGATATTCTTGCAATGCCA+TGG + chr4_2:58522797-58522816 None:intergenic 45.0%
CTGATGTTCCTCTGGCAAAT+TGG - chr4_2:58522860-58522879 Msa0610670:CDS 45.0%
GGATACGATATGGGATGTCA+TGG - chr4_2:58522922-58522941 Msa0610670:CDS 45.0%
CAGAAACAATGCACAGAAGG+AGG - chr4_2:58523038-58523057 Msa0610670:CDS 45.0%
AAACTCAAGTCACCAGTCAG+AGG - chr4_2:58523268-58523287 Msa0610670:CDS 45.0%
ATCTCTCTTCTTCCTCTGAC+TGG + chr4_2:58523283-58523302 None:intergenic 45.0%
AAATGCCTTGGAACACAACG+AGG - chr4_2:58523311-58523330 Msa0610670:CDS 45.0%
TTCATCCTCGTTGTGTTCCA+AGG + chr4_2:58523319-58523338 None:intergenic 45.0%
AAATGCCTTGGGACACAATG+AGG - chr4_2:58523398-58523417 Msa0610670:CDS 45.0%
TTCATCCTCATTGTGTCCCA+AGG + chr4_2:58523406-58523425 None:intergenic 45.0%
AGATTGCTCGGAGAATGTCT+TGG - chr4_2:58523473-58523492 Msa0610670:CDS 45.0%
GAATGTCTTGGAACACAACG+AGG - chr4_2:58523485-58523504 Msa0610670:CDS 45.0%
!! TGATTTCAAGCGTCGAAGCA+AGG - chr4_2:58523647-58523666 Msa0610670:CDS 45.0%
ATCTTCAGTGGAGGAGAGAA+AGG - chr4_2:58523999-58524018 Msa0610670:CDS 45.0%
TCTTCAGTGGAGGAGAGAAA+GGG - chr4_2:58524000-58524019 Msa0610670:CDS 45.0%
GAGGACAAAAACTTCTGGTG+AGG + chr4_2:58524272-58524291 None:intergenic 45.0%
AAGCCGAGGACAAAAACTTC+TGG + chr4_2:58524277-58524296 None:intergenic 45.0%
TGAAGAGAGTTCTCATACCG+AGG - chr4_2:58524304-58524323 Msa0610670:intron 45.0%
GAAGAGAGTTCTCATACCGA+GGG - chr4_2:58524305-58524324 Msa0610670:intron 45.0%
TACCGAGGGAAGTTCATGTA+TGG - chr4_2:58524319-58524338 Msa0610670:intron 45.0%
CACCATACATGAACTTCCCT+CGG + chr4_2:58524324-58524343 None:intergenic 45.0%
! AATTGATGGACCGGAATGTG+TGG - chr4_2:58524592-58524611 Msa0610670:CDS 45.0%
GAGAGTTCTTGTACCAAGGA+AGG - chr4_2:58524662-58524681 Msa0610670:CDS 45.0%
CACCATACATGAACCTTCCT+TGG + chr4_2:58524678-58524697 None:intergenic 45.0%
CAAGGAAGGTTCATGTATGG+TGG - chr4_2:58524676-58524695 Msa0610670:exon 45.0%
! TAGTTGAGGGCAAAGCCTTT+TGG + chr4_2:58524823-58524842 None:intergenic 45.0%
GAGAGTTCTCATACCAAGGA+AGG - chr4_2:58524854-58524873 Msa0610670:intron 45.0%
CTCATACCAAGGAAGGTTCA+CGG - chr4_2:58524861-58524880 Msa0610670:intron 45.0%
TCATACCAAGGAAGGTTCAC+GGG - chr4_2:58524862-58524881 Msa0610670:intron 45.0%
GTCTTCATTGCAAGAAGCTG+AGG + chr4_2:58524483-58524502 None:intergenic 45.0%
TGAAGACAGCTCTCATACCA+AGG - chr4_2:58525042-58525061 Msa0610670:intron 45.0%
! GAGAAGGAGCCACAATCTTT+TGG + chr4_2:58525256-58525275 None:intergenic 45.0%
!! TATGTATATAAAAAAATAAA+AGG + chr4_2:58520369-58520388 None:intergenic 5.0%
AAGGGAAGGGAGAGAAGAGA+CGG + chr4_2:58520224-58520243 None:intergenic 50.0%
!! TTAGGTTTGGTGAGCGGGAA+GGG + chr4_2:58520242-58520261 None:intergenic 50.0%
!! TTTAGGTTTGGTGAGCGGGA+AGG + chr4_2:58520243-58520262 None:intergenic 50.0%
! GGAAGAGAGGAGGAGGTTTT+AGG + chr4_2:58520260-58520279 None:intergenic 50.0%
AACCTCCTCCTCTCTTCCAT+AGG - chr4_2:58520262-58520281 Msa0610670:CDS 50.0%
TACACGCACCTATGGAAGAG+AGG + chr4_2:58520273-58520292 None:intergenic 50.0%
! TTCCGCGAGCATTGTTGTTG+TGG + chr4_2:58520901-58520920 None:intergenic 50.0%
CAATGCTCGCGGAAAAGATC+CGG - chr4_2:58520907-58520926 Msa0610670:CDS 50.0%
! CGCGGAAAAGATCCGGTTTT+CGG - chr4_2:58520914-58520933 Msa0610670:CDS 50.0%
CTTTGGGCTATCTGGAGATC+AGG - chr4_2:58521383-58521402 Msa0610670:CDS 50.0%
AGTTAGAACCGGAGGTTCCT+AGG - chr4_2:58521537-58521556 Msa0610670:CDS 50.0%
ATACGTCTCCTAGGAACCTC+CGG + chr4_2:58521548-58521567 None:intergenic 50.0%
! GCTCTAGACATACGTCTCCT+AGG + chr4_2:58521557-58521576 None:intergenic 50.0%
CAGTACTCAGTTGGCGAAGT+TGG - chr4_2:58521596-58521615 Msa0610670:CDS 50.0%
! CCTACTGAGTACGGCTCTAA+TGG + chr4_2:58521659-58521678 None:intergenic 50.0%
CCATTAGAGCCGTACTCAGT+AGG - chr4_2:58521656-58521675 Msa0610670:CDS 50.0%
! GGCGAAGCTGGAAGATCTTT+TGG - chr4_2:58521677-58521696 Msa0610670:CDS 50.0%
AAGGTCTTCTGAGCTTGGAG+TGG - chr4_2:58521844-58521863 Msa0610670:CDS 50.0%
CTATGCTGCCAAACTCTCTC+TGG - chr4_2:58521955-58521974 Msa0610670:CDS 50.0%
CATCTCAGGCCATACAGTGT+AGG - chr4_2:58522067-58522086 Msa0610670:CDS 50.0%
GCGTATCCACCTACACTGTA+TGG + chr4_2:58522079-58522098 None:intergenic 50.0%
GAAGACAGGCAGATCGACAT+TGG + chr4_2:58522236-58522255 None:intergenic 50.0%
AGCACTTCCTGTGCAACACA+AGG - chr4_2:58522340-58522359 Msa0610670:CDS 50.0%
TTCAGCTCCTTGTGTTGCAC+AGG + chr4_2:58522350-58522369 None:intergenic 50.0%
AGCTGCCTGAAGTTTAAGCC+AGG + chr4_2:58522400-58522419 None:intergenic 50.0%
TTCCTTCCGCAGTTGGTTGA+TGG + chr4_2:58522475-58522494 None:intergenic 50.0%
CGTTGAATTCCTTCCGCAGT+TGG + chr4_2:58522482-58522501 None:intergenic 50.0%
GCGGAAGGAATTCAACGAGT+AGG - chr4_2:58522485-58522504 Msa0610670:CDS 50.0%
AAGCAGATTCTGACGCCAAC+TGG + chr4_2:58522627-58522646 None:intergenic 50.0%
!! TTGTTGCGCTGATTGGGTGT+TGG + chr4_2:58523144-58523163 None:intergenic 50.0%
ACGGATTCCACAACTGTGAC+TGG - chr4_2:58523594-58523613 Msa0610670:CDS 50.0%
GATTCCACAACTGTGACTGG+AGG - chr4_2:58523597-58523616 Msa0610670:CDS 50.0%
ATTGCCTCCAGTCACAGTTG+TGG + chr4_2:58523604-58523623 None:intergenic 50.0%
! AGAAGCAGCATCTCTGGAGA+AGG - chr4_2:58524160-58524179 Msa0610670:intron 50.0%
CTCTTCATTGCAAGAAGCCG+AGG + chr4_2:58524291-58524310 None:intergenic 50.0%
CGAGGGAAGTTCATGTATGG+TGG - chr4_2:58524322-58524341 Msa0610670:intron 50.0%
! TTGAGGGCAAAGCCTTTTGG+TGG + chr4_2:58524820-58524839 None:intergenic 50.0%
AGGCTTTGCCCTCAACTACT+TGG - chr4_2:58524825-58524844 Msa0610670:intron 50.0%
GACAGCTCTCATACCAAGGA+TGG - chr4_2:58525046-58525065 Msa0610670:intron 50.0%
! CAAGCCTTATCCCACCAAGT+GGG - chr4_2:58525089-58525108 Msa0610670:intron 50.0%
! AAGCCTTATCCCACCAAGTG+GGG - chr4_2:58525090-58525109 Msa0610670:intron 50.0%
! GAGAGAAGAGACGGGTTCTG+TGG + chr4_2:58520215-58520234 None:intergenic 55.0%
AGGGAAGGGAGAGAAGAGAC+GGG + chr4_2:58520223-58520242 None:intergenic 55.0%
TTTGGTGAGCGGGAAGGGAA+GGG + chr4_2:58520237-58520256 None:intergenic 55.0%
CACCTATGGAAGAGAGGAGG+AGG + chr4_2:58520267-58520286 None:intergenic 55.0%
ACGCACCTATGGAAGAGAGG+AGG + chr4_2:58520270-58520289 None:intergenic 55.0%
! AGCGAAGGTACACGCACCTA+TGG + chr4_2:58520281-58520300 None:intergenic 55.0%
GCATAATCGGAACGGCGCAA+CGG + chr4_2:58520409-58520428 None:intergenic 55.0%
TGGGTTCTTCTCACCTGAGC+AGG + chr4_2:58521163-58521182 None:intergenic 55.0%
CCAGCTTCGCCTACTGAGTA+CGG + chr4_2:58521668-58521687 None:intergenic 55.0%
CTCAGGCCATACAGTGTAGG+TGG - chr4_2:58522070-58522089 Msa0610670:CDS 55.0%
CTCCATCAACCAACTGCGGA+AGG - chr4_2:58522470-58522489 Msa0610670:CDS 55.0%
TTCGTCGGAGTCAAAGCCAC+CGG - chr4_2:58523103-58523122 Msa0610670:CDS 55.0%
!! TCAAGCGTCGAAGCAAGGTG+AGG - chr4_2:58523652-58523671 Msa0610670:CDS 55.0%
GCAATTGCTGACACCCTTCC+TGG - chr4_2:58524758-58524777 Msa0610670:five_prime_UTR 55.0%
CATCACCCGTGAACCTTCCT+TGG + chr4_2:58524870-58524889 None:intergenic 55.0%
CAAGGAAGGTTCACGGGTGA+TGG - chr4_2:58524868-58524887 Msa0610670:intron 55.0%
! CCACTTGGTGGGATAAGGCT+TGG + chr4_2:58525091-58525110 None:intergenic 55.0%
! CCAAGCCTTATCCCACCAAG+TGG - chr4_2:58525088-58525107 Msa0610670:intron 55.0%
CTTATCCCACCAAGTGGGGT+CGG - chr4_2:58525094-58525113 Msa0610670:intron 55.0%
GGGTTCTGTGGCAGCGCAAT+AGG + chr4_2:58520203-58520222 None:intergenic 60.0%
! GTTTGGTGAGCGGGAAGGGA+AGG + chr4_2:58520238-58520257 None:intergenic 60.0%
CCGTACTCAGTAGGCGAAGC+TGG - chr4_2:58521665-58521684 Msa0610670:CDS 60.0%
! CGACCCCACTTGGTGGGATA+AGG + chr4_2:58525096-58525115 None:intergenic 60.0%
CCTTGCCGACCCCACTTGGT+GGG + chr4_2:58525102-58525121 None:intergenic 65.0%
TCCTTGCCGACCCCACTTGG+TGG + chr4_2:58525103-58525122 None:intergenic 65.0%
CCTTCCTTGCCGACCCCACT+TGG + chr4_2:58525106-58525125 None:intergenic 65.0%
CCAAGTGGGGTCGGCAAGGA+AGG - chr4_2:58525103-58525122 Msa0610670:intron 65.0%
CCCACCAAGTGGGGTCGGCA+AGG - chr4_2:58525099-58525118 Msa0610670:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 58520200 58525369 58520200 ID=Msa0610670;Name=Msa0610670
chr4_2 mRNA 58520200 58525369 58520200 ID=Msa0610670-mRNA-1;Parent=Msa0610670;Name=Msa0610670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=199|1|0.75|1|0.66|0.5|4|0|1423
chr4_2 exon 58520200 58524066 58520200 ID=Msa0610670-mRNA-1:exon:15408;Parent=Msa0610670-mRNA-1
chr4_2 exon 58524165 58524281 58524165 ID=Msa0610670-mRNA-1:exon:15407;Parent=Msa0610670-mRNA-1
chr4_2 exon 58524401 58524803 58524401 ID=Msa0610670-mRNA-1:exon:15406;Parent=Msa0610670-mRNA-1
chr4_2 exon 58525286 58525369 58525286 ID=Msa0610670-mRNA-1:exon:15405;Parent=Msa0610670-mRNA-1
chr4_2 five_prime_UTR 58525286 58525369 58525286 ID=Msa0610670-mRNA-1:five_prime_utr;Parent=Msa0610670-mRNA-1
chr4_2 five_prime_UTR 58524689 58524803 58524689 ID=Msa0610670-mRNA-1:five_prime_utr;Parent=Msa0610670-mRNA-1
chr4_2 CDS 58524401 58524688 58524401 ID=Msa0610670-mRNA-1:cds;Parent=Msa0610670-mRNA-1
chr4_2 CDS 58524165 58524281 58524165 ID=Msa0610670-mRNA-1:cds;Parent=Msa0610670-mRNA-1
chr4_2 CDS 58520200 58524066 58520200 ID=Msa0610670-mRNA-1:cds;Parent=Msa0610670-mRNA-1
Gene Sequence

>Msa0610670

ATGAGGGTCAATGATAACCACAACAACAATGCTCGCGGAAAAGATCCGGTTTTCGGTGCAATCTTTATTGCAAACAGTGAATCGAGAAGAGAATGTTTCAAGAAGGGATTGTTTGGGCTCCCGTCTTCTTATATCCCATTCGTAGAGAAGATTATGCCCGATATGGCTTTGTTTTTATTTGATTATGAGAAGAAACTACTTCATGGTGTTTTCAAGGCTACTTCTAAGGGAGGTAGCAATATCGATCCTAAGGCATTCACTTTGCTAGGGATACAATATCCTGCTCAGGTTAAGTTCACTGAGATTTGGAAATGTAAGCCCCTTCCTGAAAAGATATTTCGAGATGCAATCAGAGAGAATTACTTTGCAGCTAACAAGTTTAACTTTGGGCTATCTGGAGATCAGGTCAATAAACTTCTACATTTGTTCGACATGAACAAGTTAGAACCGGAGGTTCCTAGGAGACGTATGTCTAGAGCAGATGATATGACATCAGAGCAGTACTCAGTTGGCGAAGTTGGAAGATCTTTTGGTCATGGAATGCTTGATGAAGGTGTTCCATTAGAGCCGTACTCAGTAGGCGAAGCTGGAAGATCTTTTGGTCATGGAATGCTTGATGAAAATGTTCAAAATGACAGAGTTTTGGGTGATAAAAGTTCACCTGTCTTGATGCATAATTACCAAGGAGAATATTCTGCACGATACAATGGATTCAGTGCAGATGATATTTTAGTAAGCAAACAAAGAAGGTCTTCTGAGCTTGGAGTGGATTATACAAGTGGATATGTTGGTGATTATTTGCCATTAAAAGATGAAAGCAGGCTTGCTGCACGCAACAATGCAGATTATTTAGATAACTATGCTGCCAAACTCTCTCTGGATACTGCAAATGGGTATGTTGGTGATTATTTGGCAAGAAAAGATGACAGCAGGTTTACGTCCCTTGAGAACAACGATTATATGGGCACACATCTCAGGCCATACAGTGTAGGTGGATACGCCGACATTCCTTCTGATGATGTTAGAGTTCATGGTGATGGCAGGTCATCAATTAGTGATAGGTTGATGGGTGAAGACCTAAGAAATAGTGGTCAGAGGATGATATTTTCGGATGATACTCCTAGTTTACGTGATTCCAATGTCGATCTGCCTGTCTTCTACAACAGGCCTAATTTAGAGCAAAGTTCTTTGGTTGAAAATCATTGCAGTTCAACTTCTGCTATGATTCACCCATTCCATTTAAGCACTTCCTGTGCAACACAAGGAGCTGAAAGTTCTATTCTGTATGATTCAGATGCTCCTGGCTTAAACTTCAGGCAGCTACCATCTTTTGGAATTAATAATGGTTCTGAGTCAATAACAGAAAGACTTTCTCCATCAACCAACTGCGGAAGGAATTCAACGAGTAGGGAACCACAACTCGTGCATACAGAACTCAAAGACAAATACAGATGGCACAATATTGGTGATTGTTTTCCAAATTCTGTATTGTATGGTAGCAACAGGGAATGCATACAAAACTCTGGCCAGTTGGCGTCAGAATCTGCTTTATATGAGGCTCGCAGTAACATTTTTTCCTTAAAGTCTTCGTCAGCTCCTATCCCTTCTTCTGATATTGGAAATAGTGGCAGGACACATGAGCCATTTTCTTCACTGTTTGATAATCACAAATCATATTTGGACTATAATGTTCATCCCATGGCATTGCAAGAATATCCGAGTCATGATATAACACTAGCAATGAACAATGGAACATTAAGTTCTGATGTTCCTCTGGCAAATTGGGATAATTTTCAAGTCCAATATGATGATTCATTGGATCATGGATACGATATGGGATGTCATGGTGATTCTCAAAATAGCAATCATGGCCATCCAAATAAAAAAAGTAGTGTGTTTTCTCGTATATCTTATGCACGTGATGTTAACAAACGGGAAAACAGAAACAATGCACAGAAGGAGGAATATGGTTCCATTACTTCAGTTGATGAAGTGATGGAAATGGTTCGTCGGAGTCAAAGCCACCGGTTGACAAAAAGAAAACCAACACCCAATCAGCGCAACAATACTGAAAGTTTGAGGAATAAAACTCAACTCAGTAGTCAGAGCAAGAAGAATGATTGCTTTGAAAATGCCTTGGAACACAACAAGGATGAAAGCTTAAGGAATAAAACTCAAGTCACCAGTCAGAGGAAGAAGAGAGATCTCTTTGAAAATGCCTTGGAACACAACGAGGATGAAAGTTTGAGGAGTAAAACTCAAATCAGTAGTTTGAAAAAGGAGAAAAGAGATTGCTCTGAAAATGCCTTGGGACACAATGAGGATGAAAGTTTGAGGAAGAAAGGTCGAATCATTAGTCTGAAAACGAAGAAAAGAGATTGCTCGGAGAATGTCTTGGAACACAACGAGGATGAAAGTTTGAGGTATAAAACGCAAACCTGTAGTATGAAGAAGAAGAAGAGAGATTGCTTTGAAAATGCCTTGGATGATCTAAATACGGATTCCACAACTGTGACTGGAGGCAATCCTAATACAACAACCAAAGTTGTTGATTTCAAGCGTCGAAGCAAGGTGAGGAAACATAGTGATGAGATTGAGAGAAGCTCCAATGAGAGTAAAAAGAGTGAGAATTTGTTGGTTGGGCAGCAAAAGAGAAGAAAGTTGATTCGCCCAAATTTCAACAAGAGTGCATCTTGTGAAGACAAAGACATTAATCTTGGCGGTTCTCAAAATTTACAACTACCATTGCTAAATGCAAGTCGTAATCATAAAGATGTTATTGGAAGTGGATGTACATTGGTGAACCAGTGTGATTATGATGTTAAAACAGATGCTGAAGTTCAAAACATCAATTATCAAACACAATCTGAAGTTAAGAATAGTAGTCACGCCACAGAATTTATCTTCAGTGGAGGAGAGAAAGGGAACGTTGTCGCCCTTCCTACATTATTTGATGGGTCAGAATGTGCGGATAATAAAAATCACCAAAAGGTTTTGTTCTCAGCTTCTTGCAGTGACGAGAGTTTTCATAACAAGGAAGGTTCATGTATGATGGATAATGTAGAAGCAGCATCTCTGGAGAAGGAATCGTTGCGTGCAATTTGTCAAGAAAAAGCAAATGTTGGCACCCTTCCTGAATTAAATGATGGATCAGAATGTGCGGATAACAAACCTCACCAGAAGTTTTTGTCCTCGGCTTCTTGCAATGAAGAGAGTTCTCATACCGAGGGAAGTTCATGTATGGTGGATAATGTAAAAGCAGTATCTCTGAAGACGGAATCATTGCATGCACTTTGTCAACAAAAAGCAAACGCTGGCACCTTTCCTGCATTAAATGATGGATCAGAATGTGCGGATAGCAAAAATGACCAAAAGGTTTTGTTCTCAGCTTCTTGCAATGAAGACAGTTGTCTAGAAAAAGTAGCATCTCTGAAGATGGAATCATTGCATACAATTTGTCTAGAAAAAGTGAATGTTAGCACTGTTCATGCATTAATTGATGGACCGGAATGTGTGGATGACAAAAATCACCAAAAGGTTTTGTCTTCAGCTTCTTGCAATGAAGAGAGTTCTTGTACCAAGGAAGGTTCATGTATGGTGGATAATGTAAAAGAAGCATCTCTGAAGATTGAATCATTGCATGCAGTTTGTCAAGAAAAAGCAATTGCTGACACCCTTCCTGGATTAAATGATGGACCAGAATGTGTGGATAACAAAAACCACCAAAAGGCTTTGCCCTCAACTACTTGGAATGAAGAGAGTTCTCATACCAAGGAAGGTTCACGGGTGATGGTTAATGTGAAAGAAGCATCTCTGAAGACAGAATCATTGCATGCAGTTTCTCAAGAAAAAGCAAATGTTGGCACTCTTCATGCACTAAATGATGGATCAGAATGTGCGGATAACAAAAATCACCAAAAGGTTTTGTCCTCAGCTTCTTGCAATGAAGACAGCTCTCATACCAAGGATGGTTCATGTATGATACAACAACCAAGCCTTATCCCACCAAGTGGGGTCGGCAAGGAAGGTTCATGTATGATGGATAATGTAAAATCAGCATCTTTGGAGACAGAATCATTGAATGCAATTTGTCAAGAAAATAATGCAGATAAGATCATATGTGCTGACAGATGTATTAATGCCAATGACAAAATGCCAAAAGATTGTGGCTCCTTCTCCATTGAAGCTAAAGATGGTTCTGAATATTTAGGGAATGCCGGTAATGAAAATGCTCCAGTTGAAACTTCTTGTCACATTGAGGCTTGCATGTAG
Protein sequence

>Msa0610670

MRVNDNHNNNARGKDPVFGAIFIANSESRRECFKKGLFGLPSSYIPFVEKIMPDMALFLFDYEKKLLHGVFKATSKGGSNIDPKAFTLLGIQYPAQVKFTEIWKCKPLPEKIFRDAIRENYFAANKFNFGLSGDQVNKLLHLFDMNKLEPEVPRRRMSRADDMTSEQYSVGEVGRSFGHGMLDEGVPLEPYSVGEAGRSFGHGMLDENVQNDRVLGDKSSPVLMHNYQGEYSARYNGFSADDILVSKQRRSSELGVDYTSGYVGDYLPLKDESRLAARNNADYLDNYAAKLSLDTANGYVGDYLARKDDSRFTSLENNDYMGTHLRPYSVGGYADIPSDDVRVHGDGRSSISDRLMGEDLRNSGQRMIFSDDTPSLRDSNVDLPVFYNRPNLEQSSLVENHCSSTSAMIHPFHLSTSCATQGAESSILYDSDAPGLNFRQLPSFGINNGSESITERLSPSTNCGRNSTSREPQLVHTELKDKYRWHNIGDCFPNSVLYGSNRECIQNSGQLASESALYEARSNIFSLKSSSAPIPSSDIGNSGRTHEPFSSLFDNHKSYLDYNVHPMALQEYPSHDITLAMNNGTLSSDVPLANWDNFQVQYDDSLDHGYDMGCHGDSQNSNHGHPNKKSSVFSRISYARDVNKRENRNNAQKEEYGSITSVDEVMEMVRRSQSHRLTKRKPTPNQRNNTESLRNKTQLSSQSKKNDCFENALEHNKDESLRNKTQVTSQRKKRDLFENALEHNEDESLRSKTQISSLKKEKRDCSENALGHNEDESLRKKGRIISLKTKKRDCSENVLEHNEDESLRYKTQTCSMKKKKRDCFENALDDLNTDSTTVTGGNPNTTTKVVDFKRRSKVRKHSDEIERSSNESKKSENLLVGQQKRRKLIRPNFNKSASCEDKDINLGGSQNLQLPLLNASRNHKDVIGSGCTLVNQCDYDVKTDAEVQNINYQTQSEVKNSSHATEFIFSGGEKGNVVALPTLFDGSECADNKNHQKVLFSASCSDESFHNKEGSCMMDNVEAASLEKESLRAICQEKANVGTLPELNDGSECADNKPHQKFLSSASCNEESSHTEGSSCMVDNVKAVSLKTESLHALCQQKANAGTFPALNDGSECADSKNDQKVLFSASCNEDSCLEKVASLKMESLHTICLEKVNVSTVHALIDGPECVDDKNHQKVLSSASCNEESSCTKEGSCMVDNVKEASLKIESLHAVCQEKAIADTLPGLNDGPECVDNKNHQKALPSTTWNEESSHTKEGSRVMVNVKEASLKTESLHAVSQEKANVGTLHALNDGSECADNKNHQKVLSSASCNEDSSHTKDGSCMIQQPSLIPPSGVGKEGSCMMDNVKSASLETESLNAICQENNADKIICADRCINANDKMPKDCGSFSIEAKDGSEYLGNAGNENAPVETSCHIEACM*