Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008320 | XP_003621422.1 | 98.819 | 254 | 3 | 0 | 54 | 307 | 2 | 255 | 0.0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008320 | sp|Q9FL82|FB270_ARATH | 66.142 | 254 | 81 | 3 | 57 | 307 | 1 | 252 | 5.18e-121 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008320 | G7L589 | 98.819 | 254 | 3 | 0 | 54 | 307 | 2 | 255 | 0.0 | 525 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039270 | Msa1008320 | 0.802433 | 5.624036e-49 | -8.615850e-47 |
| Msa0049990 | Msa1008320 | -0.802639 | 5.098752e-49 | -8.615850e-47 |
| Msa0076550 | Msa1008320 | -0.801487 | 8.798531e-49 | -8.615850e-47 |
| Msa0786050 | Msa1008320 | -0.800561 | 1.360245e-48 | -8.615850e-47 |
| Msa0181740 | Msa1008320 | -0.807243 | 5.560361e-50 | -8.615850e-47 |
| Msa0370180 | Msa1008320 | -0.807485 | 4.938755e-50 | -8.615850e-47 |
| Msa0383570 | Msa1008320 | -0.811604 | 6.442507e-51 | -8.615850e-47 |
| Msa0384570 | Msa1008320 | -0.810457 | 1.141948e-50 | -8.615850e-47 |
| Msa0434630 | Msa1008320 | -0.808318 | 3.284739e-50 | -8.615850e-47 |
| Msa0446480 | Msa1008320 | -0.811251 | 7.688065e-51 | -8.615850e-47 |
| Msa0482020 | Msa1008320 | -0.838828 | 2.280116e-57 | -8.615850e-47 |
| Msa1008320 | Msa1139260 | 0.973146 | 6.164797e-136 | -8.615850e-47 |
| Msa1008320 | Msa1209390 | -0.841416 | 4.814463e-58 | -8.615850e-47 |
| Msa1008320 | Msa1209650 | -0.809923 | 1.488569e-50 | -8.615850e-47 |
| Msa1008320 | Msa1258770 | -0.802386 | 5.749704e-49 | -8.615850e-47 |
| Msa1008320 | Msa1292560 | 0.809645 | 1.707811e-50 | -8.615850e-47 |
| Msa1008320 | Msa1298740 | -0.802803 | 4.717915e-49 | -8.615850e-47 |
| Msa1008320 | Msa1330280 | -0.808301 | 3.312647e-50 | -8.615850e-47 |
| Msa1008320 | Msa1344940 | -0.806263 | 8.955773e-50 | -8.615850e-47 |
| Msa1008320 | Msa1369900 | -0.802263 | 6.095429e-49 | -8.615850e-47 |
| Msa1008320 | Msa1450130 | 0.811932 | 5.467569e-51 | -8.615850e-47 |
| Msa0503120 | Msa1008320 | -0.800022 | 1.751203e-48 | -8.615850e-47 |
| Msa0550720 | Msa1008320 | -0.802950 | 4.399292e-49 | -8.615850e-47 |
| Msa0862300 | Msa1008320 | -0.800767 | 1.235217e-48 | -8.615850e-47 |
| Msa0879820 | Msa1008320 | -0.808688 | 2.738210e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008320 | MtrunA17_Chr7g0218771 | 98.805 | 251 | 3 | 0 | 57 | 307 | 1 | 251 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008320 | AT5G39250.2 | 66.142 | 254 | 81 | 3 | 57 | 307 | 1 | 252 | 5.26e-122 | 350 |
| Msa1008320 | AT5G39250.1 | 66.142 | 254 | 81 | 3 | 57 | 307 | 1 | 252 | 5.26e-122 | 350 |
Find 65 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACGTTGTTGGCGTTTA+TGG | 0.113675 | 7_1:+8398156 | None:intergenic |
| GAAGATCTTATGGATGTATT+TGG | 0.156608 | 7_1:-8397705 | Msa1008320:CDS |
| AAAATCCCTATGCGTGATTT+TGG | 0.158437 | 7_1:+8398726 | None:intergenic |
| GAGAATTTCCTTTGATGATT+TGG | 0.254747 | 7_1:-8398120 | Msa1008320:CDS |
| TAGGTTTCAGTAGGAGGATT+AGG | 0.276690 | 7_1:+8398200 | None:intergenic |
| TTGTTATTTATATATTGTTA+TGG | 0.281944 | 7_1:-8397538 | Msa1008320:three_prime_UTR |
| TAGCTAAAGACGATTTCTTT+TGG | 0.285765 | 7_1:-8398265 | Msa1008320:CDS |
| CTTCTTCAGATTCCATTTGA+TGG | 0.287913 | 7_1:+8398366 | None:intergenic |
| CTGTGATGTGGCAAATTCTA+AGG | 0.293619 | 7_1:-8397667 | Msa1008320:CDS |
| AGAGGGAAGTGAAGATCTTA+TGG | 0.307374 | 7_1:-8397715 | Msa1008320:CDS |
| GTATATACTTTATTATTTCA+TGG | 0.307764 | 7_1:-8397422 | Msa1008320:three_prime_UTR |
| TGTTATTTATATATTGTTAT+GGG | 0.338153 | 7_1:-8397537 | Msa1008320:three_prime_UTR |
| ATGGATATCTTTGCTATTCA+TGG | 0.339435 | 7_1:-8397739 | Msa1008320:CDS |
| CTCTTCTCGGAAGCGGTGTC+TGG | 0.348746 | 7_1:-8398062 | Msa1008320:CDS |
| GCAGATTGATGGCCATCTAT+TGG | 0.358781 | 7_1:+8398229 | None:intergenic |
| TCTGGCTCTGTCCTGCAATC+AGG | 0.360560 | 7_1:-8398044 | Msa1008320:CDS |
| GGAAGAAGTCTTGTGGCTAT+TGG | 0.366589 | 7_1:-8397646 | Msa1008320:CDS |
| CCACATCACAGAAATCCATT+TGG | 0.372208 | 7_1:+8397679 | None:intergenic |
| TGTTGATCTTGCTTCTTGTA+TGG | 0.375347 | 7_1:-8398312 | Msa1008320:CDS |
| AAGATCTTATGGATGTATTT+GGG | 0.377784 | 7_1:-8397704 | Msa1008320:CDS |
| GACTTCTGAAACCTGATTGC+AGG | 0.382994 | 7_1:+8398033 | None:intergenic |
| GGTTTCAGAAGTCCAGCTTC+TGG | 0.386300 | 7_1:-8398023 | Msa1008320:CDS |
| TGGGCGGAAGGATACAAATA+AGG | 0.418384 | 7_1:-8397880 | Msa1008320:CDS |
| TTAGGTCGCTTGCAGATTGA+TGG | 0.425972 | 7_1:+8398218 | None:intergenic |
| GGCTATTGGACATGCTAGAT+TGG | 0.433276 | 7_1:-8397632 | Msa1008320:CDS |
| AGATATCCATGCCCGGATGC+CGG | 0.435632 | 7_1:+8397752 | None:intergenic |
| TGCAACTCAGGGCCATCAAA+TGG | 0.463159 | 7_1:-8398378 | Msa1008320:intron |
| GGAGAAGAGTTCTACGTTGT+TGG | 0.464005 | 7_1:+8398147 | None:intergenic |
| TGAAGATATACTTCTCTTCT+CGG | 0.464021 | 7_1:-8398075 | Msa1008320:CDS |
| AAATCATCAAAGGAAATTCT+CGG | 0.464319 | 7_1:+8398122 | None:intergenic |
| AGTATAAACTTAATTCAGTT+GGG | 0.465297 | 7_1:-8398768 | Msa1008320:CDS |
| ATCTTTGCTATTCATGGAAG+AGG | 0.467936 | 7_1:-8397733 | Msa1008320:CDS |
| GATCAACACCCTCCAGTAAA+GGG | 0.470826 | 7_1:+8398327 | None:intergenic |
| GATATCCATGCCCGGATGCC+GGG | 0.472969 | 7_1:+8397753 | None:intergenic |
| GGATGTATTTGGGATCCAAA+TGG | 0.475681 | 7_1:-8397694 | Msa1008320:CDS |
| TAGTATAAACTTAATTCAGT+TGG | 0.481380 | 7_1:-8398769 | Msa1008320:CDS |
| ATAGTAAACCTAGGTTCAAC+CGG | 0.490159 | 7_1:+8397945 | None:intergenic |
| TTGTAGTAGGTTTCAGTAGG+AGG | 0.490448 | 7_1:+8398194 | None:intergenic |
| AGATCAACACCCTCCAGTAA+AGG | 0.495696 | 7_1:+8398326 | None:intergenic |
| CTCTGTGATGGTTGGGCGGA+AGG | 0.498808 | 7_1:-8397892 | Msa1008320:CDS |
| GTTAGTGTCTCTGTGATGGT+TGG | 0.508227 | 7_1:-8397900 | Msa1008320:CDS |
| CCGTTCAATATAATCGAAGA+TGG | 0.510171 | 7_1:+8397836 | None:intergenic |
| GGGTACATCATAAATTTACA+AGG | 0.522303 | 7_1:-8397517 | Msa1008320:three_prime_UTR |
| ACGTTGTTGGCGTTTATGGA+AGG | 0.533624 | 7_1:+8398160 | None:intergenic |
| TTAGTGTCTCTGTGATGGTT+GGG | 0.542497 | 7_1:-8397899 | Msa1008320:CDS |
| CGTGGTAATCTCATTACTCA+TGG | 0.542867 | 7_1:+8401915 | None:intergenic |
| AATGTATGTGTGCCAATAGA+TGG | 0.548994 | 7_1:-8398241 | Msa1008320:CDS |
| TATACTTCTCTTCTCGGAAG+CGG | 0.561703 | 7_1:-8398069 | Msa1008320:CDS |
| AAGTCACAAACTCCAGAAGC+TGG | 0.569927 | 7_1:+8398011 | None:intergenic |
| GATTACCTAGACATATCCCC+TGG | 0.593211 | 7_1:-8397789 | Msa1008320:CDS |
| CATCAAAGGAAATTCTCGGA+GGG | 0.597906 | 7_1:+8398126 | None:intergenic |
| GGTAGCCAGGGGATATGTCT+AGG | 0.598963 | 7_1:+8397784 | None:intergenic |
| TCTTTGCTATTCATGGAAGA+GGG | 0.599764 | 7_1:-8397732 | Msa1008320:CDS |
| CCATCTTCGATTATATTGAA+CGG | 0.603506 | 7_1:-8397836 | Msa1008320:CDS |
| AACTTGTAGTAGGTTTCAGT+AGG | 0.606356 | 7_1:+8398191 | None:intergenic |
| ACGGTCATCATATAGAGCGT+TGG | 0.609824 | 7_1:-8397817 | Msa1008320:CDS |
| GAATGTTAGTGTCTCTGTGA+TGG | 0.628771 | 7_1:-8397904 | Msa1008320:CDS |
| ATAGCAAAGATATCCATGCC+CGG | 0.629559 | 7_1:+8397745 | None:intergenic |
| CCAAATGGATTTCTGTGATG+TGG | 0.629679 | 7_1:-8397679 | Msa1008320:CDS |
| TCTTGTATTCAGAACTCTCG+AGG | 0.633242 | 7_1:+8397976 | None:intergenic |
| ATTCTAAGGAAGAAGTCTTG+TGG | 0.635806 | 7_1:-8397653 | Msa1008320:CDS |
| GTGTCTCTGTGATGGTTGGG+CGG | 0.653712 | 7_1:-8397896 | Msa1008320:CDS |
| TCTGAAGGGATAGTAAACCT+AGG | 0.660259 | 7_1:+8397936 | None:intergenic |
| GTATGGCTGTCTGTAAGCAG+TGG | 0.670737 | 7_1:-8398295 | Msa1008320:CDS |
| TCATCAAAGGAAATTCTCGG+AGG | 0.698476 | 7_1:+8398125 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTA+TGG | - | chr7_1:8399598-8399617 | Msa1008320:intron | 0.0% |
| !!! | ATTTTAAATTTCAATAGTTT+TGG | - | chr7_1:8397999-8398018 | Msa1008320:CDS | 10.0% |
| !!! | TGTCATTTTTAAAATTATTA+TGG | - | chr7_1:8399331-8399350 | Msa1008320:intron | 10.0% |
| !!! | GTCATTTTTAAAATTATTAT+GGG | - | chr7_1:8399332-8399351 | Msa1008320:intron | 10.0% |
| !! | AAAAATTAAGATAAAGATTT+AGG | + | chr7_1:8400009-8400028 | None:intergenic | 10.0% |
| !!! | TAAATCTTTATCTTAATTTT+TGG | - | chr7_1:8400008-8400027 | Msa1008320:intron | 10.0% |
| !!! | ATAACAAAATCATTTTTAAA+TGG | + | chr7_1:8400361-8400380 | None:intergenic | 10.0% |
| !!! | TTGTTATTTATATATTGTTA+TGG | - | chr7_1:8401791-8401810 | Msa1008320:intron | 10.0% |
| !!! | TGTTATTTATATATTGTTAT+GGG | - | chr7_1:8401792-8401811 | Msa1008320:intron | 10.0% |
| !!! | AAATTTTAATTATACTTGTG+GGG | + | chr7_1:8397919-8397938 | None:intergenic | 15.0% |
| !!! | CAAATTTTAATTATACTTGT+GGG | + | chr7_1:8397920-8397939 | None:intergenic | 15.0% |
| !! | AAGTATAATTAAAATTTGGT+TGG | - | chr7_1:8397922-8397941 | Msa1008320:CDS | 15.0% |
| !! | ATTTGTAAACTAGTAAAAAT+AGG | + | chr7_1:8397969-8397988 | None:intergenic | 15.0% |
| !! | TTTAGTTAAAATATGATCTA+GGG | + | chr7_1:8398026-8398045 | None:intergenic | 15.0% |
| !!! | TAGCCAATTAATTTTTTTAT+AGG | - | chr7_1:8398103-8398122 | Msa1008320:CDS | 15.0% |
| !! | AACTAAAAAGTAATTAATGA+TGG | - | chr7_1:8398664-8398683 | Msa1008320:intron | 15.0% |
| !! | GTAAAAATATTTGTAGTATA+CGG | - | chr7_1:8399512-8399531 | Msa1008320:intron | 15.0% |
| !!! | TTAAATTGTTTTAGTGTATT+TGG | - | chr7_1:8399553-8399572 | Msa1008320:intron | 15.0% |
| !! | GTATATACTTTATTATTTCA+TGG | - | chr7_1:8401907-8401926 | Msa1008320:CDS | 15.0% |
| !! | AAAAATATAGAACTCATGTT+TGG | + | chr7_1:8397797-8397816 | None:intergenic | 20.0% |
| !! | TAAATATGGTTGAAGTTAAA+GGG | + | chr7_1:8397878-8397897 | None:intergenic | 20.0% |
| !! | TTAAATATGGTTGAAGTTAA+AGG | + | chr7_1:8397879-8397898 | None:intergenic | 20.0% |
| !! | AAGTCAAATTCTCTTAAATA+TGG | + | chr7_1:8397892-8397911 | None:intergenic | 20.0% |
| !!! | CCAAATTTTAATTATACTTG+TGG | + | chr7_1:8397921-8397940 | None:intergenic | 20.0% |
| !! | CCACAAGTATAATTAAAATT+TGG | - | chr7_1:8397918-8397937 | Msa1008320:CDS | 20.0% |
| !! | CTTTAGTTAAAATATGATCT+AGG | + | chr7_1:8398027-8398046 | None:intergenic | 20.0% |
| !! | CAGCCTATAAAAAAATTAAT+TGG | + | chr7_1:8398109-8398128 | None:intergenic | 20.0% |
| !!! | CATTATCAATTTTTAGTTGA+GGG | + | chr7_1:8398231-8398250 | None:intergenic | 20.0% |
| !!! | ACATTATCAATTTTTAGTTG+AGG | + | chr7_1:8398232-8398251 | None:intergenic | 20.0% |
| !!! | CATTATCAATTTTTAGTTGA+GGG | + | chr7_1:8398231-8398250 | None:intergenic | 20.0% |
| !!! | ACATTATCAATTTTTAGTTG+AGG | + | chr7_1:8398232-8398251 | None:intergenic | 20.0% |
| !!! | TTTTCTATCAATTTTTTGAG+AGG | + | chr7_1:8398379-8398398 | None:intergenic | 20.0% |
| !!! | GTGATTTTTTTTTTTTTGAG+AGG | + | chr7_1:8398447-8398466 | None:intergenic | 20.0% |
| !! | TAAAAAGTAATTAATGATGG+TGG | - | chr7_1:8398667-8398686 | Msa1008320:intron | 20.0% |
| !! | AAAAAGTAATTAATGATGGT+GGG | - | chr7_1:8398668-8398687 | Msa1008320:intron | 20.0% |
| !! | ACTCCATTTATTATACAAAA+CGG | - | chr7_1:8398751-8398770 | Msa1008320:CDS | 20.0% |
| !!! | CTTGACATAAAATTTTCAAT+AGG | - | chr7_1:8399476-8399495 | Msa1008320:intron | 20.0% |
| !! | ACAATTTAACATCAATTCAA+CGG | + | chr7_1:8399542-8399561 | None:intergenic | 20.0% |
| !! | AAGGTTAAATGATTTATGTT+TGG | - | chr7_1:8399654-8399673 | Msa1008320:intron | 20.0% |
| !!! | GATAAAGATTTAGGATATTT+TGG | + | chr7_1:8400000-8400019 | None:intergenic | 20.0% |
| !! | TTATAAAGAGGAGAAAATAA+GGG | + | chr7_1:8400397-8400416 | None:intergenic | 20.0% |
| !! | ATTATAAAGAGGAGAAAATA+AGG | + | chr7_1:8400398-8400417 | None:intergenic | 20.0% |
| !!! | TGAATTATTTTACAGATTTC+TGG | - | chr7_1:8400534-8400553 | Msa1008320:intron | 20.0% |
| !! | TAGTATAAACTTAATTCAGT+TGG | - | chr7_1:8400560-8400579 | Msa1008320:intron | 20.0% |
| !! | AGTATAAACTTAATTCAGTT+GGG | - | chr7_1:8400561-8400580 | Msa1008320:intron | 20.0% |
| ! | AAAGTTGTGAGAAAAATTGA+AGG | - | chr7_1:8397550-8397569 | Msa1008320:three_prime_UTR | 25.0% |
| ! | AAATTGAAGGCTTGAATTTA+TGG | - | chr7_1:8397563-8397582 | Msa1008320:three_prime_UTR | 25.0% |
| ! | AATTGAAGGCTTGAATTTAT+GGG | - | chr7_1:8397564-8397583 | Msa1008320:three_prime_UTR | 25.0% |
| !!! | AATCTGTGAAATTTGGTTTT+GGG | + | chr7_1:8397688-8397707 | None:intergenic | 25.0% |
| ! | AAAAGTGAATCTGTGAAATT+TGG | + | chr7_1:8397695-8397714 | None:intergenic | 25.0% |
| ! | ATCCAAACAACACAAAAAAT+GGG | - | chr7_1:8397720-8397739 | Msa1008320:CDS | 25.0% |
| !! | AAAACTTCTAAAAAAAGGCA+AGG | + | chr7_1:8397837-8397856 | None:intergenic | 25.0% |
| !!! | TTGCCTTTTTTTAGAAGTTT+TGG | - | chr7_1:8397836-8397855 | Msa1008320:CDS | 25.0% |
| !!! | TGCCTTTTTTTAGAAGTTTT+GGG | - | chr7_1:8397837-8397856 | Msa1008320:CDS | 25.0% |
| !! | TTTTATAGGCTGAAAAACAA+CGG | - | chr7_1:8398117-8398136 | Msa1008320:CDS | 25.0% |
| ! | AATGCTATTCAACAAATACA+AGG | - | chr7_1:8398161-8398180 | Msa1008320:CDS | 25.0% |
| ! | TGGAAAATAGATACTATGAA+TGG | + | chr7_1:8398533-8398552 | None:intergenic | 25.0% |
| ! | TGTGTTTATATCTCTTCAAA+TGG | + | chr7_1:8398631-8398650 | None:intergenic | 25.0% |
| ! | AGACACATAAAATAGATAGT+GGG | + | chr7_1:8398712-8398731 | None:intergenic | 25.0% |
| ! | TAGACACATAAAATAGATAG+TGG | + | chr7_1:8398713-8398732 | None:intergenic | 25.0% |
| !! | TCTCCGTTTTGTATAATAAA+TGG | + | chr7_1:8398757-8398776 | None:intergenic | 25.0% |
| ! | ATTTATTATACAAAACGGAG+AGG | - | chr7_1:8398756-8398775 | Msa1008320:CDS | 25.0% |
| !!! | CATTAAACGTTTTGACATTT+GGG | + | chr7_1:8398789-8398808 | None:intergenic | 25.0% |
| !!! | TCATTAAACGTTTTGACATT+TGG | + | chr7_1:8398790-8398809 | None:intergenic | 25.0% |
| ! | AGAAATGATGCATTTACATA+AGG | + | chr7_1:8398825-8398844 | None:intergenic | 25.0% |
| !!! | TGTTTGTTGTGTTATATTGA+TGG | - | chr7_1:8399197-8399216 | Msa1008320:intron | 25.0% |
| ! | ATGAATCAAAAACACAAACA+CGG | + | chr7_1:8399369-8399388 | None:intergenic | 25.0% |
| !!! | TGTTTGTGTTTTTGATTCAT+TGG | - | chr7_1:8399369-8399388 | Msa1008320:intron | 25.0% |
| !! | GACATAAAATTTTCAATAGG+TGG | - | chr7_1:8399479-8399498 | Msa1008320:intron | 25.0% |
| !!! | TTTTAGTGTATTTGGTTCAA+TGG | - | chr7_1:8399561-8399580 | Msa1008320:intron | 25.0% |
| !!! | CCTTAAACTCATTTTTTGAT+GGG | + | chr7_1:8399638-8399657 | None:intergenic | 25.0% |
| !!! | ACCTTAAACTCATTTTTTGA+TGG | + | chr7_1:8399639-8399658 | None:intergenic | 25.0% |
| ! | ATTGTAAATATCATGCTTAG+AGG | - | chr7_1:8399698-8399717 | Msa1008320:intron | 25.0% |
| !!! | GAAATTGATTTTGGTATGTT+TGG | + | chr7_1:8399776-8399795 | None:intergenic | 25.0% |
| ! | ATAAATACTAAGTGCATGTT+TGG | + | chr7_1:8399838-8399857 | None:intergenic | 25.0% |
| ! | CATGCACTTAGTATTTATTA+AGG | - | chr7_1:8399840-8399859 | Msa1008320:intron | 25.0% |
| !!! | TCAAGACATTTGTTTTGATT+TGG | - | chr7_1:8400649-8400668 | Msa1008320:intron | 25.0% |
| ! | ACAGTGATATATATAGGTAA+AGG | + | chr7_1:8400772-8400791 | None:intergenic | 25.0% |
| ! | CATCAAACAGTGATATATAT+AGG | + | chr7_1:8400778-8400797 | None:intergenic | 25.0% |
| ! | TATATATCACTGTTTGATGT+AGG | - | chr7_1:8400779-8400798 | Msa1008320:intron | 25.0% |
| !!! | GGTTTTATATAACTTGTAGT+AGG | + | chr7_1:8401151-8401170 | None:intergenic | 25.0% |
| ! | AAATCATCAAAGGAAATTCT+CGG | + | chr7_1:8401210-8401229 | None:intergenic | 25.0% |
| ! | AAGATCTTATGGATGTATTT+GGG | - | chr7_1:8401625-8401644 | Msa1008320:intron | 25.0% |
| !!! | ACAATTTCCAACTATTTTTG+AGG | + | chr7_1:8401757-8401776 | None:intergenic | 25.0% |
| AAGTGATGTGAAGTAATGAA+AGG | - | chr7_1:8397523-8397542 | Msa1008320:three_prime_UTR | 30.0% | |
| GCTTGAATTTATGGGTAATT+AGG | - | chr7_1:8397572-8397591 | Msa1008320:three_prime_UTR | 30.0% | |
| !! | GAATCTGTGAAATTTGGTTT+TGG | + | chr7_1:8397689-8397708 | None:intergenic | 30.0% |
| !!! | TTTTTGTGTTGTTTGGATGA+AGG | + | chr7_1:8397718-8397737 | None:intergenic | 30.0% |
| CATCCAAACAACACAAAAAA+TGG | - | chr7_1:8397719-8397738 | Msa1008320:CDS | 30.0% | |
| !!! | TTCCCATTTTTTGTGTTGTT+TGG | + | chr7_1:8397725-8397744 | None:intergenic | 30.0% |
| CAACACAAAAAATGGGAAAA+CGG | - | chr7_1:8397727-8397746 | Msa1008320:CDS | 30.0% | |
| ATCTTGAAATTATCCCGATA+TGG | - | chr7_1:8398075-8398094 | Msa1008320:CDS | 30.0% | |
| TGAAAAACAACGGAAATCAA+GGG | - | chr7_1:8398127-8398146 | Msa1008320:CDS | 30.0% | |
| GTGTAACATGAATTTCTCAT+TGG | + | chr7_1:8398469-8398488 | None:intergenic | 30.0% | |
| ATCTCTTCAAATGGATGAAA+TGG | + | chr7_1:8398622-8398641 | None:intergenic | 30.0% | |
| ATGATGCATTTACATAAGGA+CGG | + | chr7_1:8398821-8398840 | None:intergenic | 30.0% | |
| ! | TTCTATCATTCCTTCCATTT+TGG | - | chr7_1:8398841-8398860 | Msa1008320:intron | 30.0% |
| ! | TAAGAGATGATGATGATGAT+TGG | + | chr7_1:8398938-8398957 | None:intergenic | 30.0% |
| !! | TTCACATGTTGATTTCGATT+TGG | - | chr7_1:8399023-8399042 | Msa1008320:intron | 30.0% |
| !! | TCACATGTTGATTTCGATTT+GGG | - | chr7_1:8399024-8399043 | Msa1008320:intron | 30.0% |
| CATGCAATGAAAAACATGTT+GGG | + | chr7_1:8399179-8399198 | None:intergenic | 30.0% | |
| ACATGCAATGAAAAACATGT+TGG | + | chr7_1:8399180-8399199 | None:intergenic | 30.0% | |
| ATAACATGCTCGATAAGTAT+CGG | + | chr7_1:8399275-8399294 | None:intergenic | 30.0% | |
| ACAGATCACAGAAGAATTTA+AGG | + | chr7_1:8399404-8399423 | None:intergenic | 30.0% | |
| CCCATCAAAAAATGAGTTTA+AGG | - | chr7_1:8399635-8399654 | Msa1008320:intron | 30.0% | |
| !!! | CAAAGCACTGAAATTGATTT+TGG | + | chr7_1:8399785-8399804 | None:intergenic | 30.0% |
| CAAAATCAATTTCAGTGCTT+TGG | - | chr7_1:8399783-8399802 | Msa1008320:intron | 30.0% | |
| GAGATTAACGAGTATGAATT+TGG | - | chr7_1:8399874-8399893 | Msa1008320:intron | 30.0% | |
| CTCCTCTTTATAATGATGAT+AGG | - | chr7_1:8400404-8400423 | Msa1008320:intron | 30.0% | |
| TGCCTATCATCATTATAAAG+AGG | + | chr7_1:8400409-8400428 | None:intergenic | 30.0% | |
| AAGTATTTCGTGAATCATAG+TGG | + | chr7_1:8400473-8400492 | None:intergenic | 30.0% | |
| ! | AATTTTCCAAAATCACGCAT+AGG | - | chr7_1:8400597-8400616 | Msa1008320:intron | 30.0% |
| ! | ATTTTCCAAAATCACGCATA+GGG | - | chr7_1:8400598-8400617 | Msa1008320:intron | 30.0% |
| !! | ATAGGGATTTTGAAAGAAAG+AGG | - | chr7_1:8400615-8400634 | Msa1008320:intron | 30.0% |
| ! | TAGCTAAAGACGATTTCTTT+TGG | - | chr7_1:8401064-8401083 | Msa1008320:intron | 30.0% |
| ! | GAGAATTTCCTTTGATGATT+TGG | - | chr7_1:8401209-8401228 | Msa1008320:intron | 30.0% |
| GAAAAACTCCAAATCATCAA+AGG | + | chr7_1:8401220-8401239 | None:intergenic | 30.0% | |
| ! | TGGAGTTTTTCATTGACATT+TGG | - | chr7_1:8401229-8401248 | Msa1008320:intron | 30.0% |
| ! | GGAGTTTTTCATTGACATTT+GGG | - | chr7_1:8401230-8401249 | Msa1008320:intron | 30.0% |
| TGAAGATATACTTCTCTTCT+CGG | - | chr7_1:8401254-8401273 | Msa1008320:intron | 30.0% | |
| ! | TGAATACAAGATGACTTTTC+CGG | - | chr7_1:8401365-8401384 | Msa1008320:intron | 30.0% |
| !! | CATTCTGATTTTGTTCTGAA+GGG | + | chr7_1:8401410-8401429 | None:intergenic | 30.0% |
| ! | ACATTCTGATTTTGTTCTGA+AGG | + | chr7_1:8401411-8401430 | None:intergenic | 30.0% |
| CCATCTTCGATTATATTGAA+CGG | - | chr7_1:8401493-8401512 | Msa1008320:intron | 30.0% | |
| !! | ATGGATATCTTTGCTATTCA+TGG | - | chr7_1:8401590-8401609 | Msa1008320:intron | 30.0% |
| GAAGATCTTATGGATGTATT+TGG | - | chr7_1:8401624-8401643 | Msa1008320:intron | 30.0% | |
| GGGTACATCATAAATTTACA+AGG | - | chr7_1:8401812-8401831 | Msa1008320:intron | 30.0% | |
| AAAAGTAAGGGAAAAGCTGA+AGG | - | chr7_1:8397445-8397464 | Msa1008320:three_prime_UTR | 35.0% | |
| ! | CTTTAATTTCTCAAAGTGGC+AGG | + | chr7_1:8397605-8397624 | None:intergenic | 35.0% |
| !! | CTGCCACTTTGAGAAATTAA+AGG | - | chr7_1:8397603-8397622 | Msa1008320:three_prime_UTR | 35.0% |
| ! | CAGCCTTTAATTTCTCAAAG+TGG | + | chr7_1:8397609-8397628 | None:intergenic | 35.0% |
| ! | CACTTTGAGAAATTAAAGGC+TGG | - | chr7_1:8397607-8397626 | Msa1008320:exon | 35.0% |
| TGGTAAAGTAAACACACGTT+TGG | - | chr7_1:8397754-8397773 | Msa1008320:CDS | 35.0% | |
| ! | GGCCCAAAACTTCTAAAAAA+AGG | + | chr7_1:8397842-8397861 | None:intergenic | 35.0% |
| TTAAAGGGCTGCAATAAGTA+AGG | + | chr7_1:8397863-8397882 | None:intergenic | 35.0% | |
| TTGAAATTATCCCGATATGG+TGG | - | chr7_1:8398078-8398097 | Msa1008320:CDS | 35.0% | |
| AATTGGCTAAACCACCATAT+CGG | + | chr7_1:8398092-8398111 | None:intergenic | 35.0% | |
| CTGAAAAACAACGGAAATCA+AGG | - | chr7_1:8398126-8398145 | Msa1008320:CDS | 35.0% | |
| !! | TTTTTGAGAGGATGTCTCAT+TGG | + | chr7_1:8398435-8398454 | None:intergenic | 35.0% |
| CTTACTCTTGACATTTGACA+CGG | + | chr7_1:8398576-8398595 | None:intergenic | 35.0% | |
| GAAATGGAGAGAATACCAAA+TGG | + | chr7_1:8398606-8398625 | None:intergenic | 35.0% | |
| !! | ACGTTTTGACATTTGGGTAA+AGG | + | chr7_1:8398783-8398802 | None:intergenic | 35.0% |
| GATCTTATTCTACCAGTGAA+GGG | + | chr7_1:8398871-8398890 | None:intergenic | 35.0% | |
| AAGATCGTTAATCACGATCT+AGG | - | chr7_1:8398885-8398904 | Msa1008320:intron | 35.0% | |
| !! | GATGATGATGATTGGTTTGA+GGG | + | chr7_1:8398930-8398949 | None:intergenic | 35.0% |
| !! | TGATGATGATGATTGGTTTG+AGG | + | chr7_1:8398931-8398950 | None:intergenic | 35.0% |
| CTCCAGATCTCTATAATCAA+CGG | - | chr7_1:8398962-8398981 | Msa1008320:intron | 35.0% | |
| !!! | CATTTTTTGATGGGCTAGTT+TGG | + | chr7_1:8399629-8399648 | None:intergenic | 35.0% |
| !! | GCATGTTTGGATTCACTTTT+GGG | + | chr7_1:8399825-8399844 | None:intergenic | 35.0% |
| ! | TGCATGTTTGGATTCACTTT+TGG | + | chr7_1:8399826-8399845 | None:intergenic | 35.0% |
| ! | AACGAGTATGAATTTGGTGA+TGG | - | chr7_1:8399880-8399899 | Msa1008320:intron | 35.0% |
| AAATTACTACTCACAGTGTG+TGG | + | chr7_1:8399966-8399985 | None:intergenic | 35.0% | |
| CACACTGTGAGTAGTAATTT+AGG | - | chr7_1:8399966-8399985 | Msa1008320:intron | 35.0% | |
| ! | AAAATCCCTATGCGTGATTT+TGG | + | chr7_1:8400606-8400625 | None:intergenic | 35.0% |
| !!! | TTGGTGTTTTTTCTCATGAG+AGG | - | chr7_1:8400668-8400687 | Msa1008320:intron | 35.0% |
| ! | AGAGAGTGCAACAGAAAATA+TGG | + | chr7_1:8400872-8400891 | None:intergenic | 35.0% |
| CTTCTTCAGATTCCATTTGA+TGG | + | chr7_1:8400966-8400985 | None:intergenic | 35.0% | |
| !! | GGAATCTGAAGAAGTTTTGA+AGG | - | chr7_1:8400972-8400991 | Msa1008320:intron | 35.0% |
| TGTTGATCTTGCTTCTTGTA+TGG | - | chr7_1:8401017-8401036 | Msa1008320:intron | 35.0% | |
| AATGTATGTGTGCCAATAGA+TGG | - | chr7_1:8401088-8401107 | Msa1008320:intron | 35.0% | |
| AACTTGTAGTAGGTTTCAGT+AGG | + | chr7_1:8401141-8401160 | None:intergenic | 35.0% | |
| ATAGTAAACCTAGGTTCAAC+CGG | + | chr7_1:8401387-8401406 | None:intergenic | 35.0% | |
| CCGTTCAATATAATCGAAGA+TGG | + | chr7_1:8401496-8401515 | None:intergenic | 35.0% | |
| !! | ATCTTTGCTATTCATGGAAG+AGG | - | chr7_1:8401596-8401615 | Msa1008320:intron | 35.0% |
| !! | TCTTTGCTATTCATGGAAGA+GGG | - | chr7_1:8401597-8401616 | Msa1008320:intron | 35.0% |
| ! | ATTCTAAGGAAGAAGTCTTG+TGG | - | chr7_1:8401676-8401695 | Msa1008320:intron | 35.0% |
| !!! | ACTATTTTTGAGGCAATGCT+AGG | + | chr7_1:8401747-8401766 | None:intergenic | 35.0% |
| AGCATTGCCTCAAAAATAGT+TGG | - | chr7_1:8401747-8401766 | Msa1008320:intron | 35.0% | |
| CACGAACTCTGCAAAAGTAA+GGG | - | chr7_1:8397433-8397452 | Msa1008320:three_prime_UTR | 40.0% | |
| GCTGAAGGAAATTGAAAGCT+TGG | - | chr7_1:8397460-8397479 | Msa1008320:three_prime_UTR | 40.0% | |
| ! | AATTCCTAGCTTTCATGGCA+GGG | + | chr7_1:8397643-8397662 | None:intergenic | 40.0% |
| ! | AAATTCCTAGCTTTCATGGC+AGG | + | chr7_1:8397644-8397663 | None:intergenic | 40.0% |
| ! | GCTGAAATTCCTAGCTTTCA+TGG | + | chr7_1:8397648-8397667 | None:intergenic | 40.0% |
| AAAAATGGGAAAACGGCGTT+TGG | - | chr7_1:8397734-8397753 | Msa1008320:CDS | 40.0% | |
| ATTGGCTAAACCACCATATC+GGG | + | chr7_1:8398091-8398110 | None:intergenic | 40.0% | |
| AGAGTAAGATCCTCTCCATT+TGG | - | chr7_1:8398588-8398607 | Msa1008320:intron | 40.0% | |
| GAAGGGAAAACCAAAATGGA+AGG | + | chr7_1:8398854-8398873 | None:intergenic | 40.0% | |
| CAGTGAAGGGAAAACCAAAA+TGG | + | chr7_1:8398858-8398877 | None:intergenic | 40.0% | |
| !!! | CATTTTGGTTTTCCCTTCAC+TGG | - | chr7_1:8398856-8398875 | Msa1008320:intron | 40.0% |
| CGATCTTATTCTACCAGTGA+AGG | + | chr7_1:8398872-8398891 | None:intergenic | 40.0% | |
| ATCGTTAATCACGATCTAGG+AGG | - | chr7_1:8398888-8398907 | Msa1008320:intron | 40.0% | |
| !! | ATGATGATTGGTTTGAGGGT+GGG | + | chr7_1:8398926-8398945 | None:intergenic | 40.0% |
| ! | CGTTGATTATAGAGATCTGG+AGG | + | chr7_1:8398964-8398983 | None:intergenic | 40.0% |
| ! | CACCGTTGATTATAGAGATC+TGG | + | chr7_1:8398967-8398986 | None:intergenic | 40.0% |
| TCTGTGATCTGTCGAGTATA+TGG | - | chr7_1:8399412-8399431 | Msa1008320:intron | 40.0% | |
| TGTCGAGTATATGGAAACTG+TGG | - | chr7_1:8399421-8399440 | Msa1008320:intron | 40.0% | |
| ! | ATCGATTCTAACATGCAGCT+AGG | + | chr7_1:8399738-8399757 | None:intergenic | 40.0% |
| !!! | CAGTGCTTTGGAATCACTTT+TGG | - | chr7_1:8399795-8399814 | Msa1008320:intron | 40.0% |
| !! | TGGTGATGGTTTGATTGTTG+AGG | - | chr7_1:8399894-8399913 | Msa1008320:intron | 40.0% |
| ! | GGTGATGGTTTGATTGTTGA+GGG | - | chr7_1:8399895-8399914 | Msa1008320:intron | 40.0% |
| ! | CAGAGTACGCTATGTTGTTT+GGG | + | chr7_1:8400037-8400056 | None:intergenic | 40.0% |
| ACAGAGTACGCTATGTTGTT+TGG | + | chr7_1:8400038-8400057 | None:intergenic | 40.0% | |
| AACATAGCGTACTCTGTAAC+TGG | - | chr7_1:8400041-8400060 | Msa1008320:intron | 40.0% | |
| ! | GCATTAACCAGAGTGTTATG+TGG | - | chr7_1:8400258-8400277 | Msa1008320:intron | 40.0% |
| TAGTGCAATGGACAACATCT+TGG | - | chr7_1:8400294-8400313 | Msa1008320:intron | 40.0% | |
| ! | AATGGACAACATCTTGGTGT+GGG | - | chr7_1:8400300-8400319 | Msa1008320:intron | 40.0% |
| ! | AGGAGAAAATAAGGGTACAG+AGG | + | chr7_1:8400389-8400408 | None:intergenic | 40.0% |
| !!! | TCCAGTTTTGATTGCAACTC+AGG | - | chr7_1:8400939-8400958 | Msa1008320:intron | 40.0% |
| !!! | CCAGTTTTGATTGCAACTCA+GGG | - | chr7_1:8400940-8400959 | Msa1008320:intron | 40.0% |
| TAGGTTTCAGTAGGAGGATT+AGG | + | chr7_1:8401132-8401151 | None:intergenic | 40.0% | |
| TTGTAGTAGGTTTCAGTAGG+AGG | + | chr7_1:8401138-8401157 | None:intergenic | 40.0% | |
| TTCTACGTTGTTGGCGTTTA+TGG | + | chr7_1:8401176-8401195 | None:intergenic | 40.0% | |
| CATCAAAGGAAATTCTCGGA+GGG | + | chr7_1:8401206-8401225 | None:intergenic | 40.0% | |
| TCATCAAAGGAAATTCTCGG+AGG | + | chr7_1:8401207-8401226 | None:intergenic | 40.0% | |
| TATACTTCTCTTCTCGGAAG+CGG | - | chr7_1:8401260-8401279 | Msa1008320:intron | 40.0% | |
| TCTTGTATTCAGAACTCTCG+AGG | + | chr7_1:8401356-8401375 | None:intergenic | 40.0% | |
| TCTGAAGGGATAGTAAACCT+AGG | + | chr7_1:8401396-8401415 | None:intergenic | 40.0% | |
| GAATGTTAGTGTCTCTGTGA+TGG | - | chr7_1:8401425-8401444 | Msa1008320:intron | 40.0% | |
| TTAGTGTCTCTGTGATGGTT+GGG | - | chr7_1:8401430-8401449 | Msa1008320:intron | 40.0% | |
| ATAGCAAAGATATCCATGCC+CGG | + | chr7_1:8401587-8401606 | None:intergenic | 40.0% | |
| AGAGGGAAGTGAAGATCTTA+TGG | - | chr7_1:8401614-8401633 | Msa1008320:intron | 40.0% | |
| ! | GGATGTATTTGGGATCCAAA+TGG | - | chr7_1:8401635-8401654 | Msa1008320:intron | 40.0% |
| CCACATCACAGAAATCCATT+TGG | + | chr7_1:8401653-8401672 | None:intergenic | 40.0% | |
| ! | CCAAATGGATTTCTGTGATG+TGG | - | chr7_1:8401650-8401669 | Msa1008320:intron | 40.0% |
| CTGTGATGTGGCAAATTCTA+AGG | - | chr7_1:8401662-8401681 | Msa1008320:intron | 40.0% | |
| !! | CCTTACTTTTGCAGAGTTCG+TGG | + | chr7_1:8397435-8397454 | None:intergenic | 45.0% |
| CCACGAACTCTGCAAAAGTA+AGG | - | chr7_1:8397432-8397451 | Msa1008320:three_prime_UTR | 45.0% | |
| ! | TTTTCCCTGCCATGAAAGCT+AGG | - | chr7_1:8397636-8397655 | Msa1008320:CDS | 45.0% |
| !! | GTAAACACACGTTTGGCTTG+TGG | - | chr7_1:8397761-8397780 | Msa1008320:CDS | 45.0% |
| GGAGAGAATACCAAATGGAG+AGG | + | chr7_1:8398601-8398620 | None:intergenic | 45.0% | |
| AGTGGGTCCCACTATTAAGT+GGG | + | chr7_1:8398695-8398714 | None:intergenic | 45.0% | |
| ! | TAGTGGGTCCCACTATTAAG+TGG | + | chr7_1:8398696-8398715 | None:intergenic | 45.0% |
| !! | GATGATGATTGGTTTGAGGG+TGG | + | chr7_1:8398927-8398946 | None:intergenic | 45.0% |
| !! | GATAAGTATCGGTGCTTCAG+AGG | + | chr7_1:8399264-8399283 | None:intergenic | 45.0% |
| GTGGCTAACTCACTGCATAA+TGG | + | chr7_1:8399947-8399966 | None:intergenic | 45.0% | |
| GATGCACAAGTGCATAGACA+TGG | + | chr7_1:8400231-8400250 | None:intergenic | 45.0% | |
| GTGAGGATTGCTTAGTGCAA+TGG | - | chr7_1:8400282-8400301 | Msa1008320:intron | 45.0% | |
| CAATGGACAACATCTTGGTG+TGG | - | chr7_1:8400299-8400318 | Msa1008320:intron | 45.0% | |
| ! | ATGGACAACATCTTGGTGTG+GGG | - | chr7_1:8400301-8400320 | Msa1008320:intron | 45.0% |
| ! | AGACATACGCGCATCGATAA+AGG | + | chr7_1:8400815-8400834 | None:intergenic | 45.0% |
| CCCTGAGTTGCAATCAAAAC+TGG | + | chr7_1:8400943-8400962 | None:intergenic | 45.0% | |
| !! | GAAGGCTGTTTTCCCTTTAC+TGG | - | chr7_1:8400990-8401009 | Msa1008320:intron | 45.0% |
| !! | GCTGTTTTCCCTTTACTGGA+GGG | - | chr7_1:8400994-8401013 | Msa1008320:intron | 45.0% |
| GATCAACACCCTCCAGTAAA+GGG | + | chr7_1:8401005-8401024 | None:intergenic | 45.0% | |
| AGATCAACACCCTCCAGTAA+AGG | + | chr7_1:8401006-8401025 | None:intergenic | 45.0% | |
| ! | GCAGATTGATGGCCATCTAT+TGG | + | chr7_1:8401103-8401122 | None:intergenic | 45.0% |
| TTAGGTCGCTTGCAGATTGA+TGG | + | chr7_1:8401114-8401133 | None:intergenic | 45.0% | |
| ACGTTGTTGGCGTTTATGGA+AGG | + | chr7_1:8401172-8401191 | None:intergenic | 45.0% | |
| GGAGAAGAGTTCTACGTTGT+TGG | + | chr7_1:8401185-8401204 | None:intergenic | 45.0% | |
| !! | GACTTCTGAAACCTGATTGC+AGG | + | chr7_1:8401299-8401318 | None:intergenic | 45.0% |
| AAGTCACAAACTCCAGAAGC+TGG | + | chr7_1:8401321-8401340 | None:intergenic | 45.0% | |
| ! | TGACTTTTCCGGTTGAACCT+AGG | - | chr7_1:8401376-8401395 | Msa1008320:intron | 45.0% |
| GTTAGTGTCTCTGTGATGGT+TGG | - | chr7_1:8401429-8401448 | Msa1008320:intron | 45.0% | |
| TGGGCGGAAGGATACAAATA+AGG | - | chr7_1:8401449-8401468 | Msa1008320:intron | 45.0% | |
| ACGGTCATCATATAGAGCGT+TGG | - | chr7_1:8401512-8401531 | Msa1008320:intron | 45.0% | |
| GATTACCTAGACATATCCCC+TGG | - | chr7_1:8401540-8401559 | Msa1008320:intron | 45.0% | |
| ! | GGAAGAAGTCTTGTGGCTAT+TGG | - | chr7_1:8401683-8401702 | Msa1008320:intron | 45.0% |
| GGCTATTGGACATGCTAGAT+TGG | - | chr7_1:8401697-8401716 | Msa1008320:intron | 45.0% | |
| !!! | TATAAAATTTTTGTTTATAA+AGG | + | chr7_1:8398507-8398526 | None:intergenic | 5.0% |
| !!! | ATTAATTAATTAATTTTGTA+TGG | + | chr7_1:8398553-8398572 | None:intergenic | 5.0% |
| !!! | AAAAAAAAAAAATCAATTTT+CGG | + | chr7_1:8399589-8399608 | None:intergenic | 5.0% |
| TGGTGGGACCCACTTAATAG+TGG | - | chr7_1:8398684-8398703 | Msa1008320:intron | 50.0% | |
| GGTGGGACCCACTTAATAGT+GGG | - | chr7_1:8398685-8398704 | Msa1008320:intron | 50.0% | |
| !! | GATTGGTTTGAGGGTGGGAT+TGG | + | chr7_1:8398921-8398940 | None:intergenic | 50.0% |
| CCTCACTCCACATAACACTC+TGG | + | chr7_1:8400268-8400287 | None:intergenic | 50.0% | |
| ! | CCAGAGTGTTATGTGGAGTG+AGG | - | chr7_1:8400265-8400284 | Msa1008320:intron | 50.0% |
| TGCAACTCAGGGCCATCAAA+TGG | - | chr7_1:8400951-8400970 | Msa1008320:intron | 50.0% | |
| !! | GGCTGTTTTCCCTTTACTGG+AGG | - | chr7_1:8400993-8401012 | Msa1008320:intron | 50.0% |
| GTATGGCTGTCTGTAAGCAG+TGG | - | chr7_1:8401034-8401053 | Msa1008320:intron | 50.0% | |
| GGTTTCAGAAGTCCAGCTTC+TGG | - | chr7_1:8401306-8401325 | Msa1008320:intron | 50.0% | |
| ! | GACAACATCTTGGTGTGGGG+TGG | - | chr7_1:8400304-8400323 | Msa1008320:intron | 55.0% |
| !! | TCTGGCTCTGTCCTGCAATC+AGG | - | chr7_1:8401285-8401304 | Msa1008320:intron | 55.0% |
| GTGTCTCTGTGATGGTTGGG+CGG | - | chr7_1:8401433-8401452 | Msa1008320:intron | 55.0% | |
| GGTAGCCAGGGGATATGTCT+AGG | + | chr7_1:8401548-8401567 | None:intergenic | 55.0% | |
| AGATATCCATGCCCGGATGC+CGG | + | chr7_1:8401580-8401599 | None:intergenic | 55.0% | |
| CTCTTCTCGGAAGCGGTGTC+TGG | - | chr7_1:8401267-8401286 | Msa1008320:intron | 60.0% | |
| CTCTGTGATGGTTGGGCGGA+AGG | - | chr7_1:8401437-8401456 | Msa1008320:intron | 60.0% | |
| GGGCAAAAAGGGGTAGCCAG+GGG | + | chr7_1:8401559-8401578 | None:intergenic | 60.0% | |
| CGGGCAAAAAGGGGTAGCCA+GGG | + | chr7_1:8401560-8401579 | None:intergenic | 60.0% | |
| ! | CCTGGCTACCCCTTTTTGCC+CGG | - | chr7_1:8401558-8401577 | Msa1008320:intron | 60.0% |
| ! | ACCCCTTTTTGCCCGGCATC+CGG | - | chr7_1:8401565-8401584 | Msa1008320:intron | 60.0% |
| GATATCCATGCCCGGATGCC+GGG | + | chr7_1:8401579-8401598 | None:intergenic | 60.0% | |
| CCGGGCAAAAAGGGGTAGCC+AGG | + | chr7_1:8401561-8401580 | None:intergenic | 65.0% | |
| CCCGGATGCCGGGCAAAAAG+GGG | + | chr7_1:8401569-8401588 | None:intergenic | 65.0% | |
| ! | CCCCTTTTTGCCCGGCATCC+GGG | - | chr7_1:8401566-8401585 | Msa1008320:intron | 65.0% |
| GCCCGGATGCCGGGCAAAAA+GGG | + | chr7_1:8401570-8401589 | None:intergenic | 65.0% | |
| TGCCCGGATGCCGGGCAAAA+AGG | + | chr7_1:8401571-8401590 | None:intergenic | 65.0% | |
| ! | TTTTGCCCGGCATCCGGGCA+TGG | - | chr7_1:8401571-8401590 | Msa1008320:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 8397416 | 8401935 | 8397416 | ID=Msa1008320;Name=Msa1008320 |
| chr7_1 | mRNA | 8397416 | 8401935 | 8397416 | ID=Msa1008320-mRNA-1;Parent=Msa1008320;Name=Msa1008320-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0.2|0.2|1|1|5|210|307 |
| chr7_1 | exon | 8397416 | 8398390 | 8397416 | ID=Msa1008320-mRNA-1:exon:2536;Parent=Msa1008320-mRNA-1 |
| chr7_1 | exon | 8398692 | 8398802 | 8398692 | ID=Msa1008320-mRNA-1:exon:2535;Parent=Msa1008320-mRNA-1 |
| chr7_1 | exon | 8399131 | 8399139 | 8399131 | ID=Msa1008320-mRNA-1:exon:2534;Parent=Msa1008320-mRNA-1 |
| chr7_1 | exon | 8399818 | 8399823 | 8399818 | ID=Msa1008320-mRNA-1:exon:2533;Parent=Msa1008320-mRNA-1 |
| chr7_1 | exon | 8401903 | 8401935 | 8401903 | ID=Msa1008320-mRNA-1:exon:2532;Parent=Msa1008320-mRNA-1 |
| chr7_1 | CDS | 8401903 | 8401935 | 8401903 | ID=Msa1008320-mRNA-1:cds;Parent=Msa1008320-mRNA-1 |
| chr7_1 | CDS | 8399818 | 8399823 | 8399818 | ID=Msa1008320-mRNA-1:cds;Parent=Msa1008320-mRNA-1 |
| chr7_1 | CDS | 8399131 | 8399139 | 8399131 | ID=Msa1008320-mRNA-1:cds;Parent=Msa1008320-mRNA-1 |
| chr7_1 | CDS | 8398692 | 8398802 | 8398692 | ID=Msa1008320-mRNA-1:cds;Parent=Msa1008320-mRNA-1 |
| chr7_1 | CDS | 8397626 | 8398390 | 8397626 | ID=Msa1008320-mRNA-1:cds;Parent=Msa1008320-mRNA-1 |
| chr7_1 | three_prime_UTR | 8397416 | 8397625 | 8397416 | ID=Msa1008320-mRNA-1:three_prime_utr;Parent=Msa1008320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
