Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292560 | XP_003628897.2 | 96.721 | 244 | 8 | 0 | 1 | 244 | 1 | 244 | 7.61e-174 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292560 | sp|Q8S8F9|NIC1_ARATH | 64.378 | 233 | 82 | 1 | 13 | 244 | 11 | 243 | 1.99e-115 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292560 | G7LIK7 | 96.721 | 244 | 8 | 0 | 1 | 244 | 1 | 244 | 3.63e-174 | 488 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002700 | Msa1292560 | -0.803990 | 2.677170e-49 | -8.615850e-47 |
| Msa0004180 | Msa1292560 | -0.800080 | 1.704629e-48 | -8.615850e-47 |
| Msa0021240 | Msa1292560 | -0.812539 | 4.029603e-51 | -8.615850e-47 |
| Msa0021570 | Msa1292560 | -0.800695 | 1.277440e-48 | -8.615850e-47 |
| Msa0024070 | Msa1292560 | -0.819683 | 1.021023e-52 | -8.615850e-47 |
| Msa0028410 | Msa1292560 | -0.801452 | 8.945089e-49 | -8.615850e-47 |
| Msa0028450 | Msa1292560 | -0.801356 | 9.358179e-49 | -8.615850e-47 |
| Msa0030710 | Msa1292560 | -0.819701 | 1.011538e-52 | -8.615850e-47 |
| Msa0034590 | Msa1292560 | -0.836436 | 9.368809e-57 | -8.615850e-47 |
| Msa0047400 | Msa1292560 | -0.806581 | 7.673668e-50 | -8.615850e-47 |
| Msa0048380 | Msa1292560 | 0.802383 | 5.757666e-49 | -8.615850e-47 |
| Msa0097490 | Msa1292560 | -0.807693 | 4.462711e-50 | -8.615850e-47 |
| Msa0098960 | Msa1292560 | -0.811748 | 5.994347e-51 | -8.615850e-47 |
| Msa0107830 | Msa1292560 | 0.809236 | 2.091104e-50 | -8.615850e-47 |
| Msa0113910 | Msa1292560 | -0.802375 | 5.780047e-49 | -8.615850e-47 |
| Msa0118700 | Msa1292560 | -0.808766 | 2.636286e-50 | -8.615850e-47 |
| Msa0605150 | Msa1292560 | -0.800310 | 1.530130e-48 | -8.615850e-47 |
| Msa0621870 | Msa1292560 | -0.812437 | 4.241881e-51 | -8.615850e-47 |
| Msa0622800 | Msa1292560 | -0.809556 | 1.785234e-50 | -8.615850e-47 |
| Msa0628200 | Msa1292560 | 0.813663 | 2.283933e-51 | -8.615850e-47 |
| Msa0629030 | Msa1292560 | 0.816711 | 4.803918e-52 | -8.615850e-47 |
| Msa0649140 | Msa1292560 | -0.804091 | 2.550757e-49 | -8.615850e-47 |
| Msa0650550 | Msa1292560 | 0.817183 | 3.762681e-52 | -8.615850e-47 |
| Msa0657260 | Msa1292560 | 0.835592 | 1.534054e-56 | -8.615850e-47 |
| Msa0666580 | Msa1292560 | 0.822283 | 2.573498e-53 | -8.615850e-47 |
| Msa0685860 | Msa1292560 | -0.807019 | 6.202190e-50 | -8.615850e-47 |
| Msa0701490 | Msa1292560 | 0.851814 | 6.945826e-61 | -8.615850e-47 |
| Msa0701560 | Msa1292560 | 0.852794 | 3.652948e-61 | -8.615850e-47 |
| Msa0716620 | Msa1292560 | 0.813562 | 2.404320e-51 | -8.615850e-47 |
| Msa0721260 | Msa1292560 | 0.837545 | 4.880936e-57 | -8.615850e-47 |
| Msa0727230 | Msa1292560 | 0.835127 | 2.010427e-56 | -8.615850e-47 |
| Msa0749140 | Msa1292560 | 0.808356 | 3.224958e-50 | -8.615850e-47 |
| Msa0750830 | Msa1292560 | 0.800277 | 1.554490e-48 | -8.615850e-47 |
| Msa0751510 | Msa1292560 | 0.815354 | 9.648851e-52 | -8.615850e-47 |
| Msa0753410 | Msa1292560 | 0.848783 | 4.918478e-60 | -8.615850e-47 |
| Msa0766910 | Msa1292560 | -0.800682 | 1.285400e-48 | -8.615850e-47 |
| Msa0772350 | Msa1292560 | 0.824399 | 8.245711e-54 | -8.615850e-47 |
| Msa0777600 | Msa1292560 | 0.815519 | 8.869776e-52 | -8.615850e-47 |
| Msa0792890 | Msa1292560 | 0.810671 | 1.026302e-50 | -8.615850e-47 |
| Msa0794200 | Msa1292560 | 0.822808 | 1.942762e-53 | -8.615850e-47 |
| Msa0795320 | Msa1292560 | 0.811337 | 7.362368e-51 | -8.615850e-47 |
| Msa0795330 | Msa1292560 | 0.839761 | 1.305572e-57 | -8.615850e-47 |
| Msa0826360 | Msa1292560 | 0.830634 | 2.629590e-55 | -8.615850e-47 |
| Msa0828910 | Msa1292560 | 0.807405 | 5.137405e-50 | -8.615850e-47 |
| Msa0829990 | Msa1292560 | 0.806413 | 8.326669e-50 | -8.615850e-47 |
| Msa0831450 | Msa1292560 | 0.805602 | 1.233337e-49 | -8.615850e-47 |
| Msa0837550 | Msa1292560 | 0.800513 | 1.391103e-48 | -8.615850e-47 |
| Msa0124070 | Msa1292560 | -0.802732 | 4.878770e-49 | -8.615850e-47 |
| Msa0129290 | Msa1292560 | 0.829459 | 5.087211e-55 | -8.615850e-47 |
| Msa0129820 | Msa1292560 | -0.822005 | 2.985889e-53 | -8.615850e-47 |
| Msa0136040 | Msa1292560 | -0.805901 | 1.067275e-49 | -8.615850e-47 |
| Msa0147070 | Msa1292560 | -0.816517 | 5.307994e-52 | -8.615850e-47 |
| Msa0164310 | Msa1292560 | -0.811539 | 6.655478e-51 | -8.615850e-47 |
| Msa0170640 | Msa1292560 | -0.817012 | 4.111872e-52 | -8.615850e-47 |
| Msa0172310 | Msa1292560 | -0.800237 | 1.583777e-48 | -8.615850e-47 |
| Msa0181740 | Msa1292560 | -0.807979 | 3.879212e-50 | -8.615850e-47 |
| Msa0184320 | Msa1292560 | 0.808640 | 2.803960e-50 | -8.615850e-47 |
| Msa0191180 | Msa1292560 | -0.804155 | 2.473655e-49 | -8.615850e-47 |
| Msa0191470 | Msa1292560 | 0.833662 | 4.689053e-56 | -8.615850e-47 |
| Msa0194370 | Msa1292560 | -0.814706 | 1.343974e-51 | -8.615850e-47 |
| Msa0219720 | Msa1292560 | -0.800193 | 1.616655e-48 | -8.615850e-47 |
| Msa1225280 | Msa1292560 | -0.803611 | 3.209046e-49 | -8.615850e-47 |
| Msa1229880 | Msa1292560 | -0.811472 | 6.882615e-51 | -8.615850e-47 |
| Msa1235960 | Msa1292560 | -0.827353 | 1.639851e-54 | -8.615850e-47 |
| Msa1235990 | Msa1292560 | -0.831003 | 2.135647e-55 | -8.615850e-47 |
| Msa1236090 | Msa1292560 | -0.800889 | 1.166044e-48 | -8.615850e-47 |
| Msa1239190 | Msa1292560 | 0.831330 | 1.774576e-55 | -8.615850e-47 |
| Msa1239210 | Msa1292560 | 0.818360 | 2.041139e-52 | -8.615850e-47 |
| Msa1251830 | Msa1292560 | -0.815201 | 1.043810e-51 | -8.615850e-47 |
| Msa1251890 | Msa1292560 | -0.849579 | 2.953097e-60 | -8.615850e-47 |
| Msa1254870 | Msa1292560 | 0.828020 | 1.134061e-54 | -8.615850e-47 |
| Msa1257860 | Msa1292560 | -0.802347 | 5.856500e-49 | -8.615850e-47 |
| Msa1265990 | Msa1292560 | -0.811304 | 7.485917e-51 | -8.615850e-47 |
| Msa1269200 | Msa1292560 | 0.822703 | 2.055399e-53 | -8.615850e-47 |
| Msa1292560 | Msa1298440 | 0.805436 | 1.336449e-49 | -8.615850e-47 |
| Msa1292560 | Msa1310620 | -0.801367 | 9.311818e-49 | -8.615850e-47 |
| Msa1292560 | Msa1316090 | -0.820353 | 7.174706e-53 | -8.615850e-47 |
| Msa1292560 | Msa1317090 | -0.816761 | 4.682092e-52 | -8.615850e-47 |
| Msa1292560 | Msa1328430 | 0.828225 | 1.011891e-54 | -8.615850e-47 |
| Msa1292560 | Msa1331530 | -0.806207 | 9.201585e-50 | -8.615850e-47 |
| Msa1292560 | Msa1342460 | -0.818425 | 1.973440e-52 | -8.615850e-47 |
| Msa1292560 | Msa1356500 | -0.803086 | 4.121932e-49 | -8.615850e-47 |
| Msa1292560 | Msa1357090 | -0.801264 | 9.772688e-49 | -8.615850e-47 |
| Msa1292560 | Msa1357760 | -0.806534 | 7.849247e-50 | -8.615850e-47 |
| Msa1292560 | Msa1364690 | 0.819659 | 1.034113e-52 | -8.615850e-47 |
| Msa1292560 | Msa1372570 | -0.811466 | 6.902732e-51 | -8.615850e-47 |
| Msa1292560 | Msa1378020 | 0.807854 | 4.124935e-50 | -8.615850e-47 |
| Msa1292560 | Msa1398110 | 0.840056 | 1.094108e-57 | -8.615850e-47 |
| Msa1292560 | Msa1398120 | 0.811807 | 5.819066e-51 | -8.615850e-47 |
| Msa1292560 | Msa1408320 | 0.809070 | 2.268704e-50 | -8.615850e-47 |
| Msa1292560 | Msa1437590 | 0.825395 | 4.799708e-54 | -8.615850e-47 |
| Msa1292560 | Msa1450970 | 0.814806 | 1.277149e-51 | -8.615850e-47 |
| Msa1292560 | Msa1453890 | 0.801496 | 8.762598e-49 | -8.615850e-47 |
| Msa1292560 | Msa1459920 | 0.804140 | 2.491411e-49 | -8.615850e-47 |
| Msa1292560 | Msa1459930 | 0.844868 | 5.791962e-59 | -8.615850e-47 |
| Msa1292560 | Msa1465950 | -0.801330 | 9.474378e-49 | -8.615850e-47 |
| Msa0367350 | Msa1292560 | 0.810962 | 8.877598e-51 | -8.615850e-47 |
| Msa0369660 | Msa1292560 | 0.828493 | 8.718965e-55 | -8.615850e-47 |
| Msa0369890 | Msa1292560 | 0.837324 | 5.558581e-57 | -8.615850e-47 |
| Msa0371050 | Msa1292560 | -0.806137 | 9.518751e-50 | -8.615850e-47 |
| Msa0378570 | Msa1292560 | -0.810106 | 1.359123e-50 | -8.615850e-47 |
| Msa0383110 | Msa1292560 | -0.802987 | 4.321470e-49 | -8.615850e-47 |
| Msa0384140 | Msa1292560 | -0.803746 | 3.009107e-49 | -8.615850e-47 |
| Msa0390200 | Msa1292560 | 0.806736 | 7.115489e-50 | -8.615850e-47 |
| Msa0405200 | Msa1292560 | 0.810091 | 1.369751e-50 | -8.615850e-47 |
| Msa0415010 | Msa1292560 | 0.813947 | 1.977230e-51 | -8.615850e-47 |
| Msa0417060 | Msa1292560 | 0.809306 | 2.019782e-50 | -8.615850e-47 |
| Msa0421080 | Msa1292560 | 0.821230 | 4.508260e-53 | -8.615850e-47 |
| Msa0422230 | Msa1292560 | -0.809585 | 1.759110e-50 | -8.615850e-47 |
| Msa0428720 | Msa1292560 | -0.811145 | 8.102902e-51 | -8.615850e-47 |
| Msa0433090 | Msa1292560 | 0.835668 | 1.467600e-56 | -8.615850e-47 |
| Msa0434280 | Msa1292560 | -0.803025 | 4.244442e-49 | -8.615850e-47 |
| Msa0434830 | Msa1292560 | -0.806378 | 8.470439e-50 | -8.615850e-47 |
| Msa0449500 | Msa1292560 | 0.802720 | 4.906591e-49 | -8.615850e-47 |
| Msa0463890 | Msa1292560 | 0.845983 | 2.889917e-59 | -8.615850e-47 |
| Msa0464150 | Msa1292560 | 0.830816 | 2.373704e-55 | -8.615850e-47 |
| Msa0470850 | Msa1292560 | -0.804284 | 2.325326e-49 | -8.615850e-47 |
| Msa0473000 | Msa1292560 | 0.806873 | 6.657058e-50 | -8.615850e-47 |
| Msa0474220 | Msa1292560 | -0.805106 | 1.566987e-49 | -8.615850e-47 |
| Msa0474290 | Msa1292560 | -0.806746 | 7.083108e-50 | -8.615850e-47 |
| Msa0475080 | Msa1292560 | -0.831764 | 1.387339e-55 | -8.615850e-47 |
| Msa0481580 | Msa1292560 | -0.804052 | 2.599222e-49 | -8.615850e-47 |
| Msa0985380 | Msa1292560 | 0.828509 | 8.639951e-55 | -8.615850e-47 |
| Msa0985980 | Msa1292560 | -0.822977 | 1.774210e-53 | -8.615850e-47 |
| Msa1008320 | Msa1292560 | 0.809645 | 1.707811e-50 | -8.615850e-47 |
| Msa1014530 | Msa1292560 | -0.846068 | 2.739530e-59 | -8.615850e-47 |
| Msa1023430 | Msa1292560 | 0.830488 | 2.855237e-55 | -8.615850e-47 |
| Msa1040030 | Msa1292560 | -0.811264 | 7.636560e-51 | -8.615850e-47 |
| Msa1055490 | Msa1292560 | -0.817288 | 3.564292e-52 | -8.615850e-47 |
| Msa1061840 | Msa1292560 | 0.813061 | 3.097422e-51 | -8.615850e-47 |
| Msa1062060 | Msa1292560 | 0.802513 | 5.413426e-49 | -8.615850e-47 |
| Msa1070710 | Msa1292560 | -0.806130 | 9.553050e-50 | -8.615850e-47 |
| Msa1071020 | Msa1292560 | 0.846918 | 1.605519e-59 | -8.615850e-47 |
| Msa1084340 | Msa1292560 | -0.805066 | 1.597224e-49 | -8.615850e-47 |
| Msa1085820 | Msa1292560 | 0.831402 | 1.703451e-55 | -8.615850e-47 |
| Msa0267700 | Msa1292560 | 0.840344 | 9.200569e-58 | -8.615850e-47 |
| Msa0271700 | Msa1292560 | 0.831336 | 1.768447e-55 | -8.615850e-47 |
| Msa0271720 | Msa1292560 | 0.824997 | 5.958897e-54 | -8.615850e-47 |
| Msa0273400 | Msa1292560 | 0.800617 | 1.324957e-48 | -8.615850e-47 |
| Msa0274000 | Msa1292560 | -0.811414 | 7.084923e-51 | -8.615850e-47 |
| Msa0288300 | Msa1292560 | -0.804633 | 1.967332e-49 | -8.615850e-47 |
| Msa0305810 | Msa1292560 | -0.803830 | 2.891280e-49 | -8.615850e-47 |
| Msa0312300 | Msa1292560 | 0.858274 | 9.221627e-63 | -8.615850e-47 |
| Msa0314620 | Msa1292560 | -0.809845 | 1.546864e-50 | -8.615850e-47 |
| Msa0320140 | Msa1292560 | 0.811322 | 7.417854e-51 | -8.615850e-47 |
| Msa0324810 | Msa1292560 | 0.824154 | 9.411930e-54 | -8.615850e-47 |
| Msa0336550 | Msa1292560 | -0.811713 | 6.101208e-51 | -8.615850e-47 |
| Msa0343230 | Msa1292560 | -0.811811 | 5.808533e-51 | -8.615850e-47 |
| Msa1107220 | Msa1292560 | 0.807533 | 4.824340e-50 | -8.615850e-47 |
| Msa1107250 | Msa1292560 | 0.821792 | 3.344422e-53 | -8.615850e-47 |
| Msa1107510 | Msa1292560 | 0.827918 | 1.199815e-54 | -8.615850e-47 |
| Msa1126980 | Msa1292560 | -0.809361 | 1.965864e-50 | -8.615850e-47 |
| Msa1127940 | Msa1292560 | 0.802589 | 5.221591e-49 | -8.615850e-47 |
| Msa1131120 | Msa1292560 | 0.801385 | 9.232882e-49 | -8.615850e-47 |
| Msa1137750 | Msa1292560 | 0.801075 | 1.068341e-48 | -8.615850e-47 |
| Msa1139260 | Msa1292560 | 0.800859 | 1.182480e-48 | -8.615850e-47 |
| Msa1143060 | Msa1292560 | -0.813077 | 3.072550e-51 | -8.615850e-47 |
| Msa1150740 | Msa1292560 | 0.819080 | 1.401569e-52 | -8.615850e-47 |
| Msa1150760 | Msa1292560 | 0.810077 | 1.378730e-50 | -8.615850e-47 |
| Msa1151070 | Msa1292560 | 0.835475 | 1.642493e-56 | -8.615850e-47 |
| Msa1154130 | Msa1292560 | -0.806312 | 8.744997e-50 | -8.615850e-47 |
| Msa1157200 | Msa1292560 | 0.806710 | 7.207650e-50 | -8.615850e-47 |
| Msa1158540 | Msa1292560 | -0.815047 | 1.129178e-51 | -8.615850e-47 |
| Msa1161390 | Msa1292560 | -0.809371 | 1.956336e-50 | -8.615850e-47 |
| Msa1162050 | Msa1292560 | 0.801233 | 9.918771e-49 | -8.615850e-47 |
| Msa1165860 | Msa1292560 | 0.805973 | 1.030456e-49 | -8.615850e-47 |
| Msa1177300 | Msa1292560 | -0.804168 | 2.458880e-49 | -8.615850e-47 |
| Msa1185270 | Msa1292560 | 0.832081 | 1.158371e-55 | -8.615850e-47 |
| Msa1197210 | Msa1292560 | -0.837106 | 6.320438e-57 | -8.615850e-47 |
| Msa1197230 | Msa1292560 | 0.878217 | 3.357232e-69 | -8.615850e-47 |
| Msa1202110 | Msa1292560 | 0.826062 | 3.334301e-54 | -8.615850e-47 |
| Msa1223050 | Msa1292560 | -0.810434 | 1.155021e-50 | -8.615850e-47 |
| Msa0483000 | Msa1292560 | 0.811577 | 6.531647e-51 | -8.615850e-47 |
| Msa0484240 | Msa1292560 | 0.807495 | 4.916335e-50 | -8.615850e-47 |
| Msa0485290 | Msa1292560 | 0.803681 | 3.103476e-49 | -8.615850e-47 |
| Msa0497680 | Msa1292560 | 0.816989 | 4.160396e-52 | -8.615850e-47 |
| Msa0509640 | Msa1292560 | 0.822151 | 2.761772e-53 | -8.615850e-47 |
| Msa0518720 | Msa1292560 | -0.804107 | 2.531645e-49 | -8.615850e-47 |
| Msa0524570 | Msa1292560 | -0.800658 | 1.299928e-48 | -8.615850e-47 |
| Msa0524710 | Msa1292560 | 0.824156 | 9.402896e-54 | -8.615850e-47 |
| Msa0527420 | Msa1292560 | -0.813373 | 2.645607e-51 | -8.615850e-47 |
| Msa0549700 | Msa1292560 | -0.800805 | 1.213243e-48 | -8.615850e-47 |
| Msa0565120 | Msa1292560 | 0.819346 | 1.218679e-52 | -8.615850e-47 |
| Msa0567420 | Msa1292560 | -0.807937 | 3.960684e-50 | -8.615850e-47 |
| Msa0572700 | Msa1292560 | 0.802568 | 5.274499e-49 | -8.615850e-47 |
| Msa0579520 | Msa1292560 | 0.814876 | 1.232294e-51 | -8.615850e-47 |
| Msa0583270 | Msa1292560 | -0.806611 | 7.561494e-50 | -8.615850e-47 |
| Msa0588040 | Msa1292560 | 0.825365 | 4.876985e-54 | -8.615850e-47 |
| Msa0594470 | Msa1292560 | 0.810465 | 1.137146e-50 | -8.615850e-47 |
| Msa0597800 | Msa1292560 | 0.831318 | 1.786833e-55 | -8.615850e-47 |
| Msa0597820 | Msa1292560 | 0.822688 | 2.072351e-53 | -8.615850e-47 |
| Msa0598610 | Msa1292560 | -0.831318 | 1.786359e-55 | -8.615850e-47 |
| Msa0855260 | Msa1292560 | 0.801429 | 9.044346e-49 | -8.615850e-47 |
| Msa0865830 | Msa1292560 | 0.827176 | 1.807272e-54 | -8.615850e-47 |
| Msa0874750 | Msa1292560 | 0.804665 | 1.936890e-49 | -8.615850e-47 |
| Msa0879820 | Msa1292560 | -0.804547 | 2.050007e-49 | -8.615850e-47 |
| Msa0879940 | Msa1292560 | -0.805218 | 1.484578e-49 | -8.615850e-47 |
| Msa0880370 | Msa1292560 | -0.810362 | 1.197020e-50 | -8.615850e-47 |
| Msa0883880 | Msa1292560 | -0.801009 | 1.102234e-48 | -8.615850e-47 |
| Msa0910560 | Msa1292560 | 0.824255 | 8.912172e-54 | -8.615850e-47 |
| Msa0910590 | Msa1292560 | 0.804689 | 1.914491e-49 | -8.615850e-47 |
| Msa0911440 | Msa1292560 | -0.806414 | 8.322515e-50 | -8.615850e-47 |
| Msa0911490 | Msa1292560 | -0.807003 | 6.249024e-50 | -8.615850e-47 |
| Msa0933050 | Msa1292560 | -0.813340 | 2.689991e-51 | -8.615850e-47 |
| Msa0933320 | Msa1292560 | -0.803240 | 3.830596e-49 | -8.615850e-47 |
| Msa0934800 | Msa1292560 | -0.804972 | 1.671051e-49 | -8.615850e-47 |
| Msa0946570 | Msa1292560 | -0.825470 | 4.605221e-54 | -8.615850e-47 |
| Msa0947420 | Msa1292560 | 0.815770 | 7.797584e-52 | -8.615850e-47 |
| Msa0956580 | Msa1292560 | -0.800896 | 1.162344e-48 | -8.615850e-47 |
| Msa0967940 | Msa1292560 | -0.810430 | 1.157327e-50 | -8.615850e-47 |
| Msa0970160 | Msa1292560 | -0.804602 | 1.996391e-49 | -8.615850e-47 |
| Msa0970940 | Msa1292560 | -0.819405 | 1.181395e-52 | -8.615850e-47 |
| Msa0971100 | Msa1292560 | -0.805777 | 1.133250e-49 | -8.615850e-47 |
| Msa0974410 | Msa1292560 | -0.823665 | 1.225450e-53 | -8.615850e-47 |
| Msa0976400 | Msa1292560 | 0.817923 | 2.562951e-52 | -8.615850e-47 |
| Msa0976950 | Msa1292560 | -0.811648 | 6.302256e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292560 | MtrunA17_Chr8g0367511 | 96.721 | 244 | 8 | 0 | 1 | 244 | 1 | 244 | 7.00e-178 | 488 |
| Msa1292560 | MtrunA17_Chr4g0049831 | 60.084 | 238 | 95 | 0 | 7 | 244 | 27 | 264 | 1.25e-113 | 327 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292560 | AT2G22570.1 | 64.378 | 233 | 82 | 1 | 13 | 244 | 11 | 243 | 2.02e-116 | 333 |
| Msa1292560 | AT2G22570.2 | 63.265 | 147 | 53 | 1 | 13 | 158 | 11 | 157 | 1.11e-68 | 209 |
Find 68 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCTCCTCATTGTCTTAT+TGG | 0.100923 | 8_3:+48892404 | Msa1292560:CDS |
| TTCTGTATTGATAATGTTAT+TGG | 0.121435 | 8_3:+48895460 | Msa1292560:three_prime_UTR |
| CGTGATTTGGTCAAATAATT+TGG | 0.138354 | 8_3:+48891937 | Msa1292560:five_prime_UTR |
| GTCCTCGTTGATCTTGTTAA+TGG | 0.182595 | 8_3:+48892091 | Msa1292560:CDS |
| CAAATCACGTAATTATTATA+AGG | 0.226279 | 8_3:-48891923 | None:intergenic |
| ATGACACCTTTGATGCTATC+TGG | 0.264551 | 8_3:-48895306 | None:intergenic |
| ATTCAGAGCCCATGTTGTTT+TGG | 0.286383 | 8_3:-48891979 | None:intergenic |
| CTTATAATAATTACGTGATT+TGG | 0.291854 | 8_3:+48891924 | Msa1292560:five_prime_UTR |
| GACTGCATTGATGGATTCAT+TGG | 0.318733 | 8_3:+48893378 | Msa1292560:CDS |
| CACCAGATCTTTGCTAGCTT+TGG | 0.323118 | 8_3:-48894209 | None:intergenic |
| TTGCTCCTGAGTGTTGCATT+TGG | 0.331157 | 8_3:-48893354 | None:intergenic |
| CTTATATACGAAAATTCTAT+AGG | 0.357175 | 8_3:-48895543 | None:intergenic |
| CTCTAATGTGTTTATTGATT+GGG | 0.358219 | 8_3:+48893419 | Msa1292560:CDS |
| GCTCTAATGTGTTTATTGAT+TGG | 0.369907 | 8_3:+48893418 | Msa1292560:CDS |
| TGAGGAGGATAAGGAGGTTC+AGG | 0.370110 | 8_3:-48892392 | None:intergenic |
| TCGCGGTTTCCTTTCTCCTC+TGG | 0.370388 | 8_3:+48894129 | Msa1292560:CDS |
| GTGTTGCGTTTAAAAGTCTT+TGG | 0.383188 | 8_3:+48895404 | Msa1292560:three_prime_UTR |
| TAAGGAGGTTCAGGAATATC+AGG | 0.390296 | 8_3:-48892383 | None:intergenic |
| TTATTGTTTAATAACATGTT+TGG | 0.402357 | 8_3:+48895382 | Msa1292560:three_prime_UTR |
| GAATCAAGATAAGCAAATAT+TGG | 0.405541 | 8_3:-48892353 | None:intergenic |
| GATGAAAGCAAATTAGTTCC+TGG | 0.413459 | 8_3:+48892431 | Msa1292560:CDS |
| AGGAGCAAAGACTGCATTGA+TGG | 0.415455 | 8_3:+48893369 | Msa1292560:CDS |
| CTATCAGATACCTTCAAAAC+TGG | 0.417165 | 8_3:+48892064 | Msa1292560:CDS |
| AAGAATAATTACGAAGTTGC+CGG | 0.420829 | 8_3:-48892131 | None:intergenic |
| TTATTGGAATGCGTTTATAC+TGG | 0.438197 | 8_3:+48895476 | Msa1292560:three_prime_UTR |
| GGTTTCTGCACCGTTGGATC+CGG | 0.450802 | 8_3:+48892112 | Msa1292560:CDS |
| AAATCACGTAATTATTATAA+GGG | 0.460495 | 8_3:-48891922 | None:intergenic |
| AGGAACTAATTTGCTTTCAT+CGG | 0.461633 | 8_3:-48892429 | None:intergenic |
| GTTAATGGTTTCTGCACCGT+TGG | 0.463955 | 8_3:+48892106 | Msa1292560:CDS |
| ATAAGACAATGAGGAGGATA+AGG | 0.464415 | 8_3:-48892401 | None:intergenic |
| TCTCGCAGACAAAACTGAAC+AGG | 0.475158 | 8_3:-48894104 | None:intergenic |
| AAATGAAGATCTCCTCTGGC+TGG | 0.479902 | 8_3:+48893323 | Msa1292560:intron |
| TACGAAGTTGCCGGATCCAA+CGG | 0.481544 | 8_3:-48892122 | None:intergenic |
| TGACACCTTTGATGCTATCT+GGG | 0.502158 | 8_3:-48895305 | None:intergenic |
| AGCCAAAGCTAGCAAAGATC+TGG | 0.505190 | 8_3:+48894207 | Msa1292560:CDS |
| CTAGCTTTGGCTACATGTAG+TGG | 0.506568 | 8_3:-48894196 | None:intergenic |
| CACTTTACATAGCCGTGGGA+AGG | 0.508305 | 8_3:+48895278 | Msa1292560:CDS |
| TCCTCTGGAAAATGTGATTG+TGG | 0.515877 | 8_3:+48894144 | Msa1292560:CDS |
| ATTGGTTCGTATGAGAAAGA+TGG | 0.517940 | 8_3:+48893396 | Msa1292560:CDS |
| AAGGTATCTGATAGAAGAAG+AGG | 0.530007 | 8_3:-48892055 | None:intergenic |
| AATGAAATGAAGATCTCCTC+TGG | 0.533168 | 8_3:+48893319 | Msa1292560:intron |
| CTTTACATAGCCGTGGGAAG+GGG | 0.535636 | 8_3:+48895280 | Msa1292560:CDS |
| TGGAATGCGTTTATACTGGT+TGG | 0.537139 | 8_3:+48895480 | Msa1292560:three_prime_UTR |
| ATGCACTGATATCTGCGTGC+TGG | 0.538194 | 8_3:+48894075 | Msa1292560:CDS |
| CGATGAGAAAATTAGTAAGA+TGG | 0.545937 | 8_3:+48892283 | Msa1292560:CDS |
| TGAGAAAATTAGTAAGATGG+TGG | 0.546145 | 8_3:+48892286 | Msa1292560:CDS |
| GATCATAAGTAGCACAAGCA+TGG | 0.546634 | 8_3:-48894171 | None:intergenic |
| CTCTGAATCTCAATCTCCGA+CGG | 0.551673 | 8_3:+48891994 | Msa1292560:CDS |
| TCCGACGGTGGAGCTTGTAA+AGG | 0.551838 | 8_3:+48892009 | Msa1292560:CDS |
| ACTTTACATAGCCGTGGGAA+GGG | 0.552368 | 8_3:+48895279 | Msa1292560:CDS |
| AGATCTGGTGTCACATCCAC+AGG | 0.561424 | 8_3:+48894222 | Msa1292560:CDS |
| CATCTTGAGGCTAGTTAACA+CGG | 0.561753 | 8_3:-48895609 | None:intergenic |
| AAGCAGACATCGTTAAGTGT+TGG | 0.570890 | 8_3:+48895336 | Msa1292560:exon |
| TCCTTTACAAGCTCCACCGT+CGG | 0.571855 | 8_3:-48892010 | None:intergenic |
| TGAATCTCAATCTCCGACGG+TGG | 0.574215 | 8_3:+48891997 | Msa1292560:CDS |
| ATCATAAGTAGCACAAGCAT+GGG | 0.575362 | 8_3:-48894170 | None:intergenic |
| TGTTGCACTTTACATAGCCG+TGG | 0.579004 | 8_3:+48895273 | Msa1292560:CDS |
| GGGAGCCCAGATAGCATCAA+AGG | 0.586512 | 8_3:+48895300 | Msa1292560:CDS |
| AACTCCAAACCAAAACAACA+TGG | 0.595457 | 8_3:+48891970 | Msa1292560:exon |
| GTTGCACTTTACATAGCCGT+GGG | 0.616215 | 8_3:+48895274 | Msa1292560:CDS |
| ATGATCCAAATGCAACACTC+AGG | 0.618760 | 8_3:+48893349 | Msa1292560:CDS |
| AGACAATGAGGAGGATAAGG+AGG | 0.632532 | 8_3:-48892398 | None:intergenic |
| ATAAGTAGCACAAGCATGGG+AGG | 0.633418 | 8_3:-48894167 | None:intergenic |
| TATCTGGGCTCCCCTTCCCA+CGG | 0.657861 | 8_3:-48895290 | None:intergenic |
| TCGGATCCAATAAGACAATG+AGG | 0.675598 | 8_3:-48892410 | None:intergenic |
| ACTCCAAACCAAAACAACAT+GGG | 0.686000 | 8_3:+48891971 | Msa1292560:exon |
| GATCCAATAAGACAATGAGG+AGG | 0.711794 | 8_3:-48892407 | None:intergenic |
| AACCATTAACAAGATCAACG+AGG | 0.806684 | 8_3:-48892093 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTAAAATTTATGTTAA+AGG | + | chr8_3:48893057-48893076 | Msa1292560:intron | 10.0% |
| !! | AAATCACGTAATTATTATAA+GGG | - | chr8_3:48891925-48891944 | None:intergenic | 15.0% |
| !! | CATCTTCAAATAATATTATA+TGG | + | chr8_3:48892471-48892490 | Msa1292560:intron | 15.0% |
| !! | GATAAACAAAATTAACATTT+GGG | - | chr8_3:48893117-48893136 | None:intergenic | 15.0% |
| !! | TGATAAACAAAATTAACATT+TGG | - | chr8_3:48893118-48893137 | None:intergenic | 15.0% |
| !!! | ATTTTTACTAGTTTGAATTT+GGG | + | chr8_3:48893667-48893686 | Msa1292560:intron | 15.0% |
| !!! | TATTTGGTCAAATTAAATTT+TGG | + | chr8_3:48894245-48894264 | Msa1292560:intron | 15.0% |
| !! | TTCAAAAAAATAAAATCAAG+TGG | - | chr8_3:48894550-48894569 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGAAAAAACATTG+AGG | + | chr8_3:48894559-48894578 | Msa1292560:intron | 15.0% |
| !! | TTATTGTTTAATAACATGTT+TGG | + | chr8_3:48895382-48895401 | Msa1292560:three_prime_UTR | 15.0% |
| !! | CAAATCACGTAATTATTATA+AGG | - | chr8_3:48891926-48891945 | None:intergenic | 20.0% |
| !! | CTTATAATAATTACGTGATT+TGG | + | chr8_3:48891924-48891943 | Msa1292560:five_prime_UTR | 20.0% |
| !!! | TATTTTGTTGTTATTGTGAT+AGG | + | chr8_3:48892247-48892266 | Msa1292560:intron | 20.0% |
| !!! | AAAAATTTGCTGAGAAAAAT+TGG | + | chr8_3:48892330-48892349 | Msa1292560:CDS | 20.0% |
| !!! | TTGAATGTAACTATATGTTT+TGG | + | chr8_3:48892555-48892574 | Msa1292560:intron | 20.0% |
| !!! | TAATTTTCCAAACAAATAGA+AGG | + | chr8_3:48892997-48893016 | Msa1292560:intron | 20.0% |
| !!! | AATTTTCCAAACAAATAGAA+GGG | + | chr8_3:48892998-48893017 | Msa1292560:intron | 20.0% |
| !! | AATAATGCTCAAAAGTTATT+GGG | - | chr8_3:48893148-48893167 | None:intergenic | 20.0% |
| !! | AAATAATGCTCAAAAGTTAT+TGG | - | chr8_3:48893149-48893168 | None:intergenic | 20.0% |
| !! | AGCATTATTTCAACTATTAA+GGG | + | chr8_3:48893159-48893178 | Msa1292560:intron | 20.0% |
| !! | GAATAAAATAATAACAACAC+AGG | - | chr8_3:48893478-48893497 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGATTTTTGAAAC+TGG | + | chr8_3:48893583-48893602 | Msa1292560:intron | 20.0% |
| !!! | GATTTTTACTAGTTTGAATT+TGG | + | chr8_3:48893666-48893685 | Msa1292560:intron | 20.0% |
| !! | AGTGTAAATATTATTCATCA+TGG | - | chr8_3:48893744-48893763 | None:intergenic | 20.0% |
| !! | AAAAAACAACTAAAGTTGAA+AGG | - | chr8_3:48894402-48894421 | None:intergenic | 20.0% |
| !! | AATCTCATTATTTAGATGTT+TGG | + | chr8_3:48894497-48894516 | Msa1292560:intron | 20.0% |
| !! | AATGTAGATGCAAAAAAAAT+TGG | - | chr8_3:48894977-48894996 | None:intergenic | 20.0% |
| !!! | TTCTGTATTGATAATGTTAT+TGG | + | chr8_3:48895460-48895479 | Msa1292560:three_prime_UTR | 20.0% |
| !! | CTTATATACGAAAATTCTAT+AGG | - | chr8_3:48895546-48895565 | None:intergenic | 20.0% |
| ! | GAATCAAGATAAGCAAATAT+TGG | - | chr8_3:48892356-48892375 | None:intergenic | 25.0% |
| ! | GATAGAAAAGAAATAATACC+AGG | - | chr8_3:48892452-48892471 | None:intergenic | 25.0% |
| ! | GTAATTATATATGTCAGTGT+TGG | - | chr8_3:48892688-48892707 | None:intergenic | 25.0% |
| ! | CTATTAGATATTCTCAATGA+AGG | - | chr8_3:48892903-48892922 | None:intergenic | 25.0% |
| ! | TCAAATATGGAAACTCTAAA+AGG | + | chr8_3:48892964-48892983 | Msa1292560:intron | 25.0% |
| !! | CAAATATGGAAACTCTAAAA+GGG | + | chr8_3:48892965-48892984 | Msa1292560:intron | 25.0% |
| ! | AAAAGAATATACTTCTCCTA+AGG | - | chr8_3:48893038-48893057 | None:intergenic | 25.0% |
| ! | GAGCATTATTTCAACTATTA+AGG | + | chr8_3:48893158-48893177 | Msa1292560:intron | 25.0% |
| ! | ACAAAGATATACATGCTTAT+TGG | + | chr8_3:48893255-48893274 | Msa1292560:intron | 25.0% |
| !! | CTCTAATGTGTTTATTGATT+GGG | + | chr8_3:48893419-48893438 | Msa1292560:CDS | 25.0% |
| !! | ATTTTATTCTCTGTTATTGC+AGG | + | chr8_3:48893489-48893508 | Msa1292560:intron | 25.0% |
| ! | TGAAAACATTAATCTTCACA+TGG | - | chr8_3:48893771-48893790 | None:intergenic | 25.0% |
| !! | AATGTTTTCACTTTCCTATA+TGG | + | chr8_3:48893781-48893800 | Msa1292560:intron | 25.0% |
| ! | ATACAAAGTCTTTACCATAA+CGG | + | chr8_3:48893874-48893893 | Msa1292560:intron | 25.0% |
| ! | AATAAAGAATCTGTCAATTG+AGG | - | chr8_3:48893969-48893988 | None:intergenic | 25.0% |
| !! | TTGTTTAGTTCATAGATTCT+TGG | + | chr8_3:48893999-48894018 | Msa1292560:intron | 25.0% |
| !! | ATTATTTAGATGTTTGGTGA+TGG | + | chr8_3:48894503-48894522 | Msa1292560:intron | 25.0% |
| !! | ACCAAATTTTCAAAATCAGA+CGG | - | chr8_3:48894683-48894702 | None:intergenic | 25.0% |
| ! | ACAAATGTCTACTTTATATC+TGG | + | chr8_3:48895006-48895025 | Msa1292560:intron | 25.0% |
| !! | CGTGATTTGGTCAAATAATT+TGG | + | chr8_3:48891937-48891956 | Msa1292560:five_prime_UTR | 30.0% |
| AAGAATAATTACGAAGTTGC+CGG | - | chr8_3:48892134-48892153 | None:intergenic | 30.0% | |
| AGATAACAGAGTAAGTTAAG+AGG | - | chr8_3:48892178-48892197 | None:intergenic | 30.0% | |
| CATGACAATGAAAAAGACAA+AGG | - | chr8_3:48892203-48892222 | None:intergenic | 30.0% | |
| ! | ATTTTCTCATCGTGTTCTTT+TGG | - | chr8_3:48892275-48892294 | None:intergenic | 30.0% |
| CGATGAGAAAATTAGTAAGA+TGG | + | chr8_3:48892283-48892302 | Msa1292560:CDS | 30.0% | |
| TGAGAAAATTAGTAAGATGG+TGG | + | chr8_3:48892286-48892305 | Msa1292560:CDS | 30.0% | |
| !! | AGGAACTAATTTGCTTTCAT+CGG | - | chr8_3:48892432-48892451 | None:intergenic | 30.0% |
| !! | CATCCATTTTTATTAAGCCA+TGG | + | chr8_3:48892836-48892855 | Msa1292560:intron | 30.0% |
| ATAGTACCAACTTCCTAATA+AGG | + | chr8_3:48892919-48892938 | Msa1292560:intron | 30.0% | |
| !! | TTAAAGGGTACTTCCTTATT+AGG | - | chr8_3:48892935-48892954 | None:intergenic | 30.0% |
| ATTTGATGAGGGGATTTAAA+GGG | - | chr8_3:48892950-48892969 | None:intergenic | 30.0% | |
| TATTTGATGAGGGGATTTAA+AGG | - | chr8_3:48892951-48892970 | None:intergenic | 30.0% | |
| TTAAATCCCCTCATCAAATA+TGG | + | chr8_3:48892951-48892970 | Msa1292560:intron | 30.0% | |
| AGAGTTTCCATATTTGATGA+GGG | - | chr8_3:48892961-48892980 | None:intergenic | 30.0% | |
| TAGAGTTTCCATATTTGATG+AGG | - | chr8_3:48892962-48892981 | None:intergenic | 30.0% | |
| AATATACTTCTCCTAAGGTT+TGG | - | chr8_3:48893033-48893052 | None:intergenic | 30.0% | |
| !! | GGTTCTTGAAGTCATTTTAT+TGG | + | chr8_3:48893078-48893097 | Msa1292560:intron | 30.0% |
| TTACTCTTCAAACTACTACT+TGG | + | chr8_3:48893231-48893250 | Msa1292560:intron | 30.0% | |
| GATATACATGCTTATTGGAA+TGG | + | chr8_3:48893260-48893279 | Msa1292560:intron | 30.0% | |
| AGGAAACCAAAACCAAATTA+GGG | - | chr8_3:48893295-48893314 | None:intergenic | 30.0% | |
| AGATCTTCATTTCATTTCAG+AGG | - | chr8_3:48893315-48893334 | None:intergenic | 30.0% | |
| GCTCTAATGTGTTTATTGAT+TGG | + | chr8_3:48893418-48893437 | Msa1292560:CDS | 30.0% | |
| TACACTTTCTTGCTTAATGA+TGG | - | chr8_3:48893527-48893546 | None:intergenic | 30.0% | |
| !!! | TAGTTGATTTTTGAAACTGG+TGG | + | chr8_3:48893586-48893605 | Msa1292560:intron | 30.0% |
| TTAAACATAGTAGCTTACAG+TGG | - | chr8_3:48893629-48893648 | None:intergenic | 30.0% | |
| ACTGTAAGCTACTATGTTTA+AGG | + | chr8_3:48893628-48893647 | Msa1292560:intron | 30.0% | |
| ! | TAAGCTACTATGTTTAAGGT+AGG | + | chr8_3:48893632-48893651 | Msa1292560:intron | 30.0% |
| ! | AAGCTACTATGTTTAAGGTA+GGG | + | chr8_3:48893633-48893652 | Msa1292560:intron | 30.0% |
| ! | TACTAGTTTGAATTTGGGAT+AGG | + | chr8_3:48893672-48893691 | Msa1292560:intron | 30.0% |
| !! | TTTGAATTTGGGATAGGTTT+TGG | + | chr8_3:48893678-48893697 | Msa1292560:intron | 30.0% |
| TTAAGGAACTATGAATGAGA+AGG | + | chr8_3:48893702-48893721 | Msa1292560:intron | 30.0% | |
| ATTCCAACAATCATTAGTTG+AGG | - | chr8_3:48893809-48893828 | None:intergenic | 30.0% | |
| !! | TTTTCACTTGTTACAGGTTT+TGG | + | chr8_3:48894042-48894061 | Msa1292560:intron | 30.0% |
| ! | TTAATTTGACCAAATACCTG+TGG | - | chr8_3:48894241-48894260 | None:intergenic | 30.0% |
| ! | CATGTTCTGACTTTGTATTT+TGG | + | chr8_3:48894630-48894649 | Msa1292560:intron | 30.0% |
| TTGGATCTAACATACAAAGT+TGG | + | chr8_3:48894649-48894668 | Msa1292560:intron | 30.0% | |
| !! | ACCGTCTGATTTTGAAAATT+TGG | + | chr8_3:48894679-48894698 | Msa1292560:intron | 30.0% |
| AAAATTTGGTCCAATTGTCT+GGG | + | chr8_3:48894693-48894712 | Msa1292560:intron | 30.0% | |
| AAAATTGGCAGCAAAAAACA+AGG | - | chr8_3:48894962-48894981 | None:intergenic | 30.0% | |
| TTTCATCCATAGCAATAGAA+GGG | + | chr8_3:48895034-48895053 | Msa1292560:intron | 30.0% | |
| TAAAATCCCTTCTATTGCTA+TGG | - | chr8_3:48895043-48895062 | None:intergenic | 30.0% | |
| !! | CAATAGAAGGGATTTTAAGA+TGG | + | chr8_3:48895046-48895065 | Msa1292560:intron | 30.0% |
| !!! | ATTCTTGTGCTGATTTTACA+TGG | + | chr8_3:48895154-48895173 | Msa1292560:intron | 30.0% |
| CTGCAGCAAAACAATAATAA+TGG | - | chr8_3:48895239-48895258 | None:intergenic | 30.0% | |
| !! | CATTATTATTGTTTTGCTGC+AGG | + | chr8_3:48895237-48895256 | Msa1292560:intron | 30.0% |
| TTATTGGAATGCGTTTATAC+TGG | + | chr8_3:48895476-48895495 | Msa1292560:three_prime_UTR | 30.0% | |
| AACTCCAAACCAAAACAACA+TGG | + | chr8_3:48891970-48891989 | Msa1292560:exon | 35.0% | |
| ACTCCAAACCAAAACAACAT+GGG | + | chr8_3:48891971-48891990 | Msa1292560:exon | 35.0% | |
| !!! | GAAGAGGTTGTTGTTTTACT+GGG | - | chr8_3:48892042-48892061 | None:intergenic | 35.0% |
| !!! | AGAAGAGGTTGTTGTTTTAC+TGG | - | chr8_3:48892043-48892062 | None:intergenic | 35.0% |
| ! | AAGGTATCTGATAGAAGAAG+AGG | - | chr8_3:48892058-48892077 | None:intergenic | 35.0% |
| CTATCAGATACCTTCAAAAC+TGG | + | chr8_3:48892064-48892083 | Msa1292560:CDS | 35.0% | |
| AACCATTAACAAGATCAACG+AGG | - | chr8_3:48892096-48892115 | None:intergenic | 35.0% | |
| ATAAGACAATGAGGAGGATA+AGG | - | chr8_3:48892404-48892423 | None:intergenic | 35.0% | |
| TATCCTCCTCATTGTCTTAT+TGG | + | chr8_3:48892404-48892423 | Msa1292560:CDS | 35.0% | |
| GATGAAAGCAAATTAGTTCC+TGG | + | chr8_3:48892431-48892450 | Msa1292560:CDS | 35.0% | |
| !! | ATATATGTCAGTGTTGGTGT+CGG | - | chr8_3:48892682-48892701 | None:intergenic | 35.0% |
| !!! | TGTCTGCTATGTCATTTTGT+GGG | - | chr8_3:48892862-48892881 | None:intergenic | 35.0% |
| !!! | TTGTCTGCTATGTCATTTTG+TGG | - | chr8_3:48892863-48892882 | None:intergenic | 35.0% |
| ACAAAATGACATAGCAGACA+AGG | + | chr8_3:48892862-48892881 | Msa1292560:intron | 35.0% | |
| CAAAATGACATAGCAGACAA+GGG | + | chr8_3:48892863-48892882 | Msa1292560:intron | 35.0% | |
| GTACTTCCTTATTAGGAAGT+TGG | - | chr8_3:48892928-48892947 | None:intergenic | 35.0% | |
| GAGTTTCCATATTTGATGAG+GGG | - | chr8_3:48892960-48892979 | None:intergenic | 35.0% | |
| ACATGTCCCTTCTATTTGTT+TGG | - | chr8_3:48893007-48893026 | None:intergenic | 35.0% | |
| !! | TTTCTGCCCTAATTTGGTTT+TGG | + | chr8_3:48893286-48893305 | Msa1292560:intron | 35.0% |
| GAGGAAACCAAAACCAAATT+AGG | - | chr8_3:48893296-48893315 | None:intergenic | 35.0% | |
| AATGAAATGAAGATCTCCTC+TGG | + | chr8_3:48893319-48893338 | Msa1292560:intron | 35.0% | |
| !! | ATTGGTTCGTATGAGAAAGA+TGG | + | chr8_3:48893396-48893415 | Msa1292560:CDS | 35.0% |
| !! | CTATGTTTAAGGTAGGGTTT+TGG | + | chr8_3:48893639-48893658 | Msa1292560:intron | 35.0% |
| !!! | TTGGGATAGGTTTTGGTTTA+AGG | + | chr8_3:48893685-48893704 | Msa1292560:intron | 35.0% |
| !! | GAGACCATAGTTCTAAATTG+TGG | + | chr8_3:48893832-48893851 | Msa1292560:intron | 35.0% |
| CTTTGTATTGCAGTTGCAAT+TGG | - | chr8_3:48893862-48893881 | None:intergenic | 35.0% | |
| !!! | TTGTTACAGGTTTTGGTTTG+TGG | + | chr8_3:48894049-48894068 | Msa1292560:intron | 35.0% |
| !!! | TGTTACAGGTTTTGGTTTGT+GGG | + | chr8_3:48894050-48894069 | Msa1292560:intron | 35.0% |
| ATCATAAGTAGCACAAGCAT+GGG | - | chr8_3:48894173-48894192 | None:intergenic | 35.0% | |
| ATAACCAACCAACACAAGAT+GGG | - | chr8_3:48894367-48894386 | None:intergenic | 35.0% | |
| TATAACCAACCAACACAAGA+TGG | - | chr8_3:48894368-48894387 | None:intergenic | 35.0% | |
| TGTTGGATCACAAGATTGAA+CGG | + | chr8_3:48894605-48894624 | Msa1292560:intron | 35.0% | |
| ! | TTTTCAAAATCAGACGGTTC+AGG | - | chr8_3:48894677-48894696 | None:intergenic | 35.0% |
| GAAAATTTGGTCCAATTGTC+TGG | + | chr8_3:48894692-48894711 | Msa1292560:intron | 35.0% | |
| AAATTTGGTCCAATTGTCTG+GGG | + | chr8_3:48894694-48894713 | Msa1292560:intron | 35.0% | |
| ! | TCCAATCTCTCTGAGAAATT+GGG | - | chr8_3:48894740-48894759 | None:intergenic | 35.0% |
| ! | ATCCAATCTCTCTGAGAAAT+TGG | - | chr8_3:48894741-48894760 | None:intergenic | 35.0% |
| TGATATTGATATTGAGCCAG+AGG | + | chr8_3:48894811-48894830 | Msa1292560:intron | 35.0% | |
| AAAATCCTTCCTTAACTGCA+TGG | + | chr8_3:48894854-48894873 | Msa1292560:intron | 35.0% | |
| ACCGTATTATAACGAACACT+TGG | + | chr8_3:48894904-48894923 | Msa1292560:intron | 35.0% | |
| GCCAAGTGTTCGTTATAATA+CGG | - | chr8_3:48894908-48894927 | None:intergenic | 35.0% | |
| ATCACAGTTTCGAACTAAAG+AGG | - | chr8_3:48894934-48894953 | None:intergenic | 35.0% | |
| CTTTCATCCATAGCAATAGA+AGG | + | chr8_3:48895033-48895052 | Msa1292560:intron | 35.0% | |
| TCACAGATTCACAATTCACA+TGG | - | chr8_3:48895117-48895136 | None:intergenic | 35.0% | |
| GTGTTGCGTTTAAAAGTCTT+TGG | + | chr8_3:48895404-48895423 | Msa1292560:three_prime_UTR | 35.0% | |
| !! | ATTCAGAGCCCATGTTGTTT+TGG | - | chr8_3:48891982-48892001 | None:intergenic | 40.0% |
| GTCCTCGTTGATCTTGTTAA+TGG | + | chr8_3:48892091-48892110 | Msa1292560:CDS | 40.0% | |
| TAAGGAGGTTCAGGAATATC+AGG | - | chr8_3:48892386-48892405 | None:intergenic | 40.0% | |
| GATCCAATAAGACAATGAGG+AGG | - | chr8_3:48892410-48892429 | None:intergenic | 40.0% | |
| TCGGATCCAATAAGACAATG+AGG | - | chr8_3:48892413-48892432 | None:intergenic | 40.0% | |
| TATGAAGCACAGACACTACT+TGG | + | chr8_3:48892632-48892651 | Msa1292560:intron | 40.0% | |
| ! | TACTTGGATTAGGTGTGTCT+TGG | + | chr8_3:48892648-48892667 | Msa1292560:intron | 40.0% |
| GGGCCATGGCTTAATAAAAA+TGG | - | chr8_3:48892842-48892861 | None:intergenic | 40.0% | |
| GGACATGTAAACCAAACCTT+AGG | + | chr8_3:48893019-48893038 | Msa1292560:intron | 40.0% | |
| ! | TGGTGTTTTCTGCCCTAATT+TGG | + | chr8_3:48893280-48893299 | Msa1292560:intron | 40.0% |
| ATGATCCAAATGCAACACTC+AGG | + | chr8_3:48893349-48893368 | Msa1292560:CDS | 40.0% | |
| !! | GACTGCATTGATGGATTCAT+TGG | + | chr8_3:48893378-48893397 | Msa1292560:CDS | 40.0% |
| CATTAGTTGAGGAGCCATAT+AGG | - | chr8_3:48893798-48893817 | None:intergenic | 40.0% | |
| GCTCCTCAACTAATGATTGT+TGG | + | chr8_3:48893803-48893822 | Msa1292560:intron | 40.0% | |
| ! | CGGACCACAATTTAGAACTA+TGG | - | chr8_3:48893839-48893858 | None:intergenic | 40.0% |
| TGTATTGCAGTTGCAATTGG+CGG | - | chr8_3:48893859-48893878 | None:intergenic | 40.0% | |
| CAAACTTGCAATTGCCGTTA+TGG | - | chr8_3:48893891-48893910 | None:intergenic | 40.0% | |
| GAATCTGTCAATTGAGGTTG+TGG | - | chr8_3:48893963-48893982 | None:intergenic | 40.0% | |
| GATTCTTGGTTGAGATTCTG+AGG | + | chr8_3:48894013-48894032 | Msa1292560:intron | 40.0% | |
| !!! | TGCTGGTTTTCACTTGTTAC+AGG | + | chr8_3:48894036-48894055 | Msa1292560:intron | 40.0% |
| ! | TCACATTTTCCAGAGGAGAA+AGG | - | chr8_3:48894141-48894160 | None:intergenic | 40.0% |
| ! | TCCTCTGGAAAATGTGATTG+TGG | + | chr8_3:48894144-48894163 | Msa1292560:CDS | 40.0% |
| GATCATAAGTAGCACAAGCA+TGG | - | chr8_3:48894174-48894193 | None:intergenic | 40.0% | |
| !! | GCTTTAAGACACACTGTAAC+TGG | + | chr8_3:48894455-48894474 | Msa1292560:intron | 40.0% |
| AATTTGGTCCAATTGTCTGG+GGG | + | chr8_3:48894695-48894714 | Msa1292560:intron | 40.0% | |
| TCCCAATTTCTCAGAGAGAT+TGG | + | chr8_3:48894736-48894755 | Msa1292560:intron | 40.0% | |
| CAATTCCATGCAGTTAAGGA+AGG | - | chr8_3:48894862-48894881 | None:intergenic | 40.0% | |
| GAGTCAATTCCATGCAGTTA+AGG | - | chr8_3:48894866-48894885 | None:intergenic | 40.0% | |
| TGACACCTTTGATGCTATCT+GGG | - | chr8_3:48895308-48895327 | None:intergenic | 40.0% | |
| ATGACACCTTTGATGCTATC+TGG | - | chr8_3:48895309-48895328 | None:intergenic | 40.0% | |
| AAGCAGACATCGTTAAGTGT+TGG | + | chr8_3:48895336-48895355 | Msa1292560:exon | 40.0% | |
| TGGAATGCGTTTATACTGGT+TGG | + | chr8_3:48895480-48895499 | Msa1292560:three_prime_UTR | 40.0% | |
| !!! | GAGCCCATGTTGTTTTGGTT+TGG | - | chr8_3:48891977-48891996 | None:intergenic | 45.0% |
| CTCTGAATCTCAATCTCCGA+CGG | + | chr8_3:48891994-48892013 | Msa1292560:CDS | 45.0% | |
| !! | GAGGACAAGACCAGTTTTGA+AGG | - | chr8_3:48892077-48892096 | None:intergenic | 45.0% |
| GTTAATGGTTTCTGCACCGT+TGG | + | chr8_3:48892106-48892125 | Msa1292560:CDS | 45.0% | |
| AGACAATGAGGAGGATAAGG+AGG | - | chr8_3:48892401-48892420 | None:intergenic | 45.0% | |
| ! | GTGTTACTATCAAACACCGC+CGG | + | chr8_3:48892582-48892601 | Msa1292560:intron | 45.0% |
| TTGAAGACGTGTTCACTGTC+CGG | - | chr8_3:48892604-48892623 | None:intergenic | 45.0% | |
| GTGTCTGTGCTTCATAGCTT+TGG | - | chr8_3:48892628-48892647 | None:intergenic | 45.0% | |
| GCACAGACACTACTTGGATT+AGG | + | chr8_3:48892638-48892657 | Msa1292560:intron | 45.0% | |
| ! | TTCGGATCTAAGCTCTGACA+CGG | - | chr8_3:48892768-48892787 | None:intergenic | 45.0% |
| TGTCAGAGCTTAGATCCGAA+GGG | + | chr8_3:48892768-48892787 | Msa1292560:intron | 45.0% | |
| !!! | CTATGTCATTTTGTGGGCCA+TGG | - | chr8_3:48892856-48892875 | None:intergenic | 45.0% |
| AAATGAAGATCTCCTCTGGC+TGG | + | chr8_3:48893323-48893342 | Msa1292560:intron | 45.0% | |
| ! | TTGGATCATTTTCCAGCCAG+AGG | - | chr8_3:48893338-48893357 | None:intergenic | 45.0% |
| ! | TTGCTCCTGAGTGTTGCATT+TGG | - | chr8_3:48893357-48893376 | None:intergenic | 45.0% |
| AGGAGCAAAGACTGCATTGA+TGG | + | chr8_3:48893369-48893388 | Msa1292560:CDS | 45.0% | |
| ATATTGCAGACGCAGCAATG+CGG | - | chr8_3:48893917-48893936 | None:intergenic | 45.0% | |
| GTCAATTGAGGTTGTGGTCA+CGG | - | chr8_3:48893957-48893976 | None:intergenic | 45.0% | |
| TCTCGCAGACAAAACTGAAC+AGG | - | chr8_3:48894107-48894126 | None:intergenic | 45.0% | |
| ! | GTTTTGTCTGCGAGAAATCG+CGG | + | chr8_3:48894112-48894131 | Msa1292560:CDS | 45.0% |
| ! | GCCACAATCACATTTTCCAG+AGG | - | chr8_3:48894148-48894167 | None:intergenic | 45.0% |
| ATAAGTAGCACAAGCATGGG+AGG | - | chr8_3:48894170-48894189 | None:intergenic | 45.0% | |
| !! | CTAGCTTTGGCTACATGTAG+TGG | - | chr8_3:48894199-48894218 | None:intergenic | 45.0% |
| AGCCAAAGCTAGCAAAGATC+TGG | + | chr8_3:48894207-48894226 | Msa1292560:CDS | 45.0% | |
| ! | CACCAGATCTTTGCTAGCTT+TGG | - | chr8_3:48894212-48894231 | None:intergenic | 45.0% |
| GTGTCACATCCACAGGTATT+TGG | + | chr8_3:48894229-48894248 | Msa1292560:intron | 45.0% | |
| CAACCAACACAAGATGGGAA+AGG | - | chr8_3:48894362-48894381 | None:intergenic | 45.0% | |
| ! | CTTTCCCATCTTGTGTTGGT+TGG | + | chr8_3:48894360-48894379 | Msa1292560:intron | 45.0% |
| TGTGATCCAACATACCAGAC+TGG | - | chr8_3:48894597-48894616 | None:intergenic | 45.0% | |
| TGGGAATCATGCATTTGACG+TGG | - | chr8_3:48894721-48894740 | None:intergenic | 45.0% | |
| AGAGATTGGATCGTCTGTAG+CGG | + | chr8_3:48894750-48894769 | Msa1292560:intron | 45.0% | |
| TGTTGCACTTTACATAGCCG+TGG | + | chr8_3:48895273-48895292 | Msa1292560:CDS | 45.0% | |
| GTTGCACTTTACATAGCCGT+GGG | + | chr8_3:48895274-48895293 | Msa1292560:CDS | 45.0% | |
| ACTTTACATAGCCGTGGGAA+GGG | + | chr8_3:48895279-48895298 | Msa1292560:CDS | 45.0% | |
| TGAATCTCAATCTCCGACGG+TGG | + | chr8_3:48891997-48892016 | Msa1292560:CDS | 50.0% | |
| TCCTTTACAAGCTCCACCGT+CGG | - | chr8_3:48892013-48892032 | None:intergenic | 50.0% | |
| TACGAAGTTGCCGGATCCAA+CGG | - | chr8_3:48892125-48892144 | None:intergenic | 50.0% | |
| TGAGGAGGATAAGGAGGTTC+AGG | - | chr8_3:48892395-48892414 | None:intergenic | 50.0% | |
| GTGTCAGAGCTTAGATCCGA+AGG | + | chr8_3:48892767-48892786 | Msa1292560:intron | 50.0% | |
| AGAGCTTAGATCCGAAGGGT+TGG | + | chr8_3:48892772-48892791 | Msa1292560:intron | 50.0% | |
| TGCTAGGTGCTAGTGCTTCA+TGG | + | chr8_3:48892795-48892814 | Msa1292560:intron | 50.0% | |
| !! | TGGTTGAGATTCTGAGGTGC+TGG | + | chr8_3:48894019-48894038 | Msa1292560:intron | 50.0% |
| ! | ATGCACTGATATCTGCGTGC+TGG | + | chr8_3:48894075-48894094 | Msa1292560:CDS | 50.0% |
| !! | AGATCTGGTGTCACATCCAC+AGG | + | chr8_3:48894222-48894241 | Msa1292560:CDS | 50.0% |
| CTGCCTTTCCCATCTTGTGT+TGG | + | chr8_3:48894356-48894375 | Msa1292560:intron | 50.0% | |
| GGTAATCACAGTCACCAGTC+TGG | + | chr8_3:48894580-48894599 | Msa1292560:intron | 50.0% | |
| CAGTCACCAGTCTGGTATGT+TGG | + | chr8_3:48894588-48894607 | Msa1292560:intron | 50.0% | |
| CACTTTACATAGCCGTGGGA+AGG | + | chr8_3:48895278-48895297 | Msa1292560:CDS | 50.0% | |
| CTTTACATAGCCGTGGGAAG+GGG | + | chr8_3:48895280-48895299 | Msa1292560:CDS | 50.0% | |
| TCCGACGGTGGAGCTTGTAA+AGG | + | chr8_3:48892009-48892028 | Msa1292560:CDS | 55.0% | |
| GGTTTCTGCACCGTTGGATC+CGG | + | chr8_3:48892112-48892131 | Msa1292560:CDS | 55.0% | |
| AAGACGTGTTCACTGTCCGG+CGG | - | chr8_3:48892601-48892620 | None:intergenic | 55.0% | |
| ! | CTAAGCTCTGACACGGACAC+TGG | - | chr8_3:48892761-48892780 | None:intergenic | 55.0% |
| !! | AGATCCGAAGGGTTGGTGCT+AGG | + | chr8_3:48892779-48892798 | Msa1292560:intron | 55.0% |
| AGCACCTAGCACCAACCCTT+CGG | - | chr8_3:48892786-48892805 | None:intergenic | 55.0% | |
| TCGCGGTTTCCTTTCTCCTC+TGG | + | chr8_3:48894129-48894148 | Msa1292560:CDS | 55.0% | |
| CGTCTGTAGCGGCTGCAAAA+CGG | + | chr8_3:48894761-48894780 | Msa1292560:intron | 55.0% | |
| TGTAGCGGCTGCAAAACGGT+TGG | + | chr8_3:48894765-48894784 | Msa1292560:intron | 55.0% | |
| CTTCCACTGCAAAGAGCCTC+TGG | - | chr8_3:48894830-48894849 | None:intergenic | 55.0% | |
| CAGAGGCTCTTTGCAGTGGA+AGG | + | chr8_3:48894828-48894847 | Msa1292560:intron | 55.0% | |
| GGGAGCCCAGATAGCATCAA+AGG | + | chr8_3:48895300-48895319 | Msa1292560:CDS | 55.0% | |
| TGACGTGGCCCCCAGACAAT+TGG | - | chr8_3:48894706-48894725 | None:intergenic | 60.0% | |
| GAGCCAGAGGCTCTTTGCAG+TGG | + | chr8_3:48894824-48894843 | Msa1292560:intron | 60.0% | |
| TATCTGGGCTCCCCTTCCCA+CGG | - | chr8_3:48895293-48895312 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 48891893 | 48895623 | 48891893 | ID=Msa1292560;Name=Msa1292560 |
| chr8_3 | mRNA | 48891893 | 48895623 | 48891893 | ID=Msa1292560-mRNA-1;Parent=Msa1292560;Name=Msa1292560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=96|1|1|1|1|1|5|287|244 |
| chr8_3 | exon | 48891893 | 48892141 | 48891893 | ID=Msa1292560-mRNA-1:exon:13576;Parent=Msa1292560-mRNA-1 |
| chr8_3 | exon | 48892269 | 48892452 | 48892269 | ID=Msa1292560-mRNA-1:exon:13577;Parent=Msa1292560-mRNA-1 |
| chr8_3 | exon | 48893331 | 48893464 | 48893331 | ID=Msa1292560-mRNA-1:exon:13578;Parent=Msa1292560-mRNA-1 |
| chr8_3 | exon | 48894058 | 48894243 | 48894058 | ID=Msa1292560-mRNA-1:exon:13579;Parent=Msa1292560-mRNA-1 |
| chr8_3 | exon | 48895259 | 48895623 | 48895259 | ID=Msa1292560-mRNA-1:exon:13580;Parent=Msa1292560-mRNA-1 |
| chr8_3 | five_prime_UTR | 48891893 | 48891988 | 48891893 | ID=Msa1292560-mRNA-1:five_prime_utr;Parent=Msa1292560-mRNA-1 |
| chr8_3 | CDS | 48891989 | 48892141 | 48891989 | ID=Msa1292560-mRNA-1:cds;Parent=Msa1292560-mRNA-1 |
| chr8_3 | CDS | 48892269 | 48892452 | 48892269 | ID=Msa1292560-mRNA-1:cds;Parent=Msa1292560-mRNA-1 |
| chr8_3 | CDS | 48893331 | 48893464 | 48893331 | ID=Msa1292560-mRNA-1:cds;Parent=Msa1292560-mRNA-1 |
| chr8_3 | CDS | 48894058 | 48894243 | 48894058 | ID=Msa1292560-mRNA-1:cds;Parent=Msa1292560-mRNA-1 |
| chr8_3 | CDS | 48895259 | 48895336 | 48895259 | ID=Msa1292560-mRNA-1:cds;Parent=Msa1292560-mRNA-1 |
| chr8_3 | three_prime_UTR | 48895337 | 48895623 | 48895337 | ID=Msa1292560-mRNA-1:three_prime_utr;Parent=Msa1292560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
