AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0786050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0786050 MtrunA17_Chr5g0443681 94.242 330 19 0 28 357 1 330 0.0 605
Msa0786050 MtrunA17_Chr3g0098181 41.985 262 123 8 121 357 7 264 1.36e-40 152
Msa0786050 MtrunA17_Chr3g0098161 41.509 159 72 2 220 357 21 179 7.49e-24 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 265 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGGTGCTTCTATATTTA+AGG 0.112248 5_2:+71444924 Msa0786050:three_prime_UTR
CTCGTTCAATGTGACCTTTC+TGG 0.137113 5_2:-71443796 None:intergenic
TTTGATGGTGTACCAGTTTC+TGG 0.139823 5_2:+71440278 Msa0786050:three_prime_UTR
AACTATGGATTCAAGGTTTC+TGG 0.146438 5_2:+71439912 Msa0786050:three_prime_UTR
TGTCTCTGTGTTGATATTTA+AGG 0.161927 5_2:-71442104 None:intergenic
TATAGAAACAATACAATTTA+AGG 0.167510 5_2:-71444969 None:intergenic
TCTCTTATAGTTGCTGATTA+TGG 0.182212 5_2:+71443031 Msa0786050:three_prime_UTR
GGTGGTCCAGATGCAGATTT+TGG 0.217120 5_2:+71439580 Msa0786050:three_prime_UTR
GAGACGGAAAATCTTGTATC+TGG 0.231363 5_2:+71439602 Msa0786050:three_prime_UTR
GATTCATCAAGACAATTAAA+TGG 0.247771 5_2:+71439972 Msa0786050:three_prime_UTR
ATGAATATTGGCGCCCATTT+GGG 0.251620 5_2:+71440324 Msa0786050:three_prime_UTR
TCAACTGCTTCACGAATATA+TGG 0.259129 5_2:-71443251 None:intergenic
CATTGTGTCTACACATTACT+AGG 0.262660 5_2:+71443731 Msa0786050:three_prime_UTR
AAGAATATTCTTGCCATAGA+AGG 0.265247 5_2:-71444750 None:intergenic
AGTTAGTGGTGATGCTTTAA+AGG 0.267067 5_2:+71440993 Msa0786050:three_prime_UTR
AGCCCGGCGGTTCCCTTTGA+TGG 0.287719 5_2:+71443757 Msa0786050:three_prime_UTR
TTTAGAATTACCTGCAGATT+TGG 0.291790 5_2:-71442148 None:intergenic
AACTATATTTGGTAAGAAAA+AGG 0.292566 5_2:+71440091 Msa0786050:three_prime_UTR
CTTAACTTCTCAATTGCATA+TGG 0.303941 5_2:+71443468 Msa0786050:three_prime_UTR
CAATGCACATGGCACGGTTA+TGG 0.311706 5_2:+71439949 Msa0786050:three_prime_UTR
AAATTGGTACTCTGCAAAAT+AGG 0.311891 5_2:+71444808 Msa0786050:three_prime_UTR
TCGTGAAGCAGTTGAGAAAA+AGG 0.315769 5_2:+71443259 Msa0786050:three_prime_UTR
GTGTCAATGAAAACTATATT+TGG 0.317683 5_2:+71440080 Msa0786050:three_prime_UTR
TTCTTGTTTGACATCTATCT+TGG 0.323457 5_2:-71439515 None:intergenic
ATGATTTCTACAATGAATAT+TGG 0.324776 5_2:+71440312 Msa0786050:three_prime_UTR
TGTCTAAAAGATAGCTCTTT+AGG 0.328542 5_2:-71440244 None:intergenic
TCTTGCATCATGTACCGATA+TGG 0.335405 5_2:+71445156 Msa0786050:three_prime_UTR
AACAGCCACTGAAAGAAAAT+TGG 0.335796 5_2:+71438836 Msa0786050:CDS
GTATACTACATGACTGTATT+TGG 0.338814 5_2:+71444830 Msa0786050:three_prime_UTR
TTCATAAATGTAACGCGAAC+CGG 0.343055 5_2:-71438687 None:intergenic
GTGGCTGTTGTGGAAAGTTC+AGG 0.345603 5_2:-71438822 None:intergenic
TCGTATCTATGAAGATATTC+TGG 0.346038 5_2:+71439283 Msa0786050:CDS
ACAGCTTGAACTTAGGATTC+TGG 0.346500 5_2:+71443145 Msa0786050:intron
CGAGAGAGACGGCAGCATAA+AGG 0.347711 5_2:-71437196 None:intergenic
AATGAATATTGGCGCCCATT+TGG 0.349493 5_2:+71440323 Msa0786050:three_prime_UTR
AGTTAATGGTGATGATGTTT+TGG 0.350312 5_2:+71439175 Msa0786050:CDS
GAATTAGAATCAACCTGCTT+TGG 0.359625 5_2:+71442958 Msa0786050:intron
AATGCACATGGCACGGTTAT+GGG 0.361842 5_2:+71439950 Msa0786050:three_prime_UTR
ATGCCAAGTGTGCTCAAAAT+TGG 0.367669 5_2:+71444792 Msa0786050:three_prime_UTR
AGTAGGACTTTCTAAGGATT+GGG 0.368246 5_2:+71443500 Msa0786050:three_prime_UTR
CTGTTGATAGATTCAGGAAA+TGG 0.368623 5_2:+71440441 Msa0786050:three_prime_UTR
GAAGGCCATTGCTAGCAATC+TGG 0.371870 5_2:-71438545 None:intergenic
AACCATGAAAAGGATTTGAT+TGG 0.372861 5_2:+71440053 Msa0786050:three_prime_UTR
GACTCCAGTAGGACTTTCTA+AGG 0.374256 5_2:+71443494 Msa0786050:three_prime_UTR
CTCAGTTGGAAGTGCTAGAT+TGG 0.374851 5_2:-71440833 None:intergenic
CGTCCTAAGTTAAGAGTGAT+AGG 0.375141 5_2:-71445047 None:intergenic
CAGTTTAATGAATCTGCATT+GGG 0.376715 5_2:+71439128 Msa0786050:CDS
ATTCTTGCCATAGAAGGGTT+TGG 0.378109 5_2:-71444744 None:intergenic
CAAGCATTCATTGCTGCGCC+TGG 0.380291 5_2:+71443004 Msa0786050:three_prime_UTR
CTTTGCACATACATATTGAT+TGG 0.383573 5_2:+71445254 Msa0786050:three_prime_UTR
TGCATGTCCAAACCCTTCTA+TGG 0.384741 5_2:+71444737 Msa0786050:three_prime_UTR
TAGTGACTATTTAGAGTGTT+TGG 0.385310 5_2:+71445281 Msa0786050:three_prime_UTR
TTTATACATTCAGATAGCTT+TGG 0.386221 5_2:+71444859 Msa0786050:three_prime_UTR
TCTCTCTGCAGATCTTCAAC+AGG 0.386422 5_2:-71440155 None:intergenic
TGCATCAGCTAGCATGTTAG+AGG 0.388984 5_2:+71438719 Msa0786050:CDS
GGACATGCACTCAACAACTA+TGG 0.390941 5_2:-71444723 None:intergenic
TATTCATTGCAGTCCTTGAA+TGG 0.393568 5_2:-71443223 None:intergenic
AAAGTTGATAACTCTGCATA+TGG 0.394014 5_2:+71441138 Msa0786050:three_prime_UTR
GAGTGAACCTGTGGGGAGTA+AGG 0.394863 5_2:-71437261 None:intergenic
AGATAGCTGTTGATAGATTC+AGG 0.395308 5_2:+71440435 Msa0786050:three_prime_UTR
TGTGTACATTTCTGTCTTCA+AGG 0.395631 5_2:-71440953 None:intergenic
AGCTATCTCTTGCTCTACTT+TGG 0.399232 5_2:-71440420 None:intergenic
TTCAATCACTTCATCAACAT+TGG 0.400056 5_2:-71440872 None:intergenic
ATTCATCAAGACAATTAAAT+GGG 0.402582 5_2:+71439973 Msa0786050:three_prime_UTR
GGTTTATCTTCACCAGGCTG+AGG 0.405175 5_2:-71443302 None:intergenic
TGCGTCTTCTGCAACTTCAA+TGG 0.407381 5_2:-71437128 None:intergenic
ATCACAAGAGGCTGCTACTC+TGG 0.410559 5_2:+71444907 Msa0786050:three_prime_UTR
CCGTCTCCAAAATCTGCATC+TGG 0.412606 5_2:-71439586 None:intergenic
CTTTCTGGTAAGTATTAGCT+TGG 0.413148 5_2:-71443781 None:intergenic
CAGTAGGACTTTCTAAGGAT+TGG 0.413822 5_2:+71443499 Msa0786050:three_prime_UTR
GAGAGAGACGGCAGCATAAA+GGG 0.415295 5_2:-71437195 None:intergenic
TGTCATGTTATAGAGAACTA+TGG 0.419594 5_2:+71439897 Msa0786050:three_prime_UTR
CTCCGTTGGAAAAGCAGAAA+AGG 0.420128 5_2:-71441166 None:intergenic
CTAAGAAAACAGTTGACCTT+TGG 0.420547 5_2:+71443645 Msa0786050:three_prime_UTR
GAAGATAAGGAGAGGGAGAA+AGG 0.421429 5_2:-71437220 None:intergenic
AAATTGTATTGTTTCTATAG+AGG 0.422041 5_2:+71444973 Msa0786050:three_prime_UTR
GGTTCATGATGAAGTCATAT+TGG 0.422201 5_2:+71444667 Msa0786050:intron
CACCGACCAGTCAAAACTTC+AGG 0.424070 5_2:+71439250 Msa0786050:CDS
TTGATGGTGTACCAGTTTCT+GGG 0.428787 5_2:+71440279 Msa0786050:three_prime_UTR
TCTCTCCCTTCTTTCTCCGT+TGG 0.436529 5_2:-71441180 None:intergenic
TCTAATAGATTTGCTTCCAT+TGG 0.437649 5_2:+71438969 Msa0786050:CDS
TCAATCACTTCATCAACATT+GGG 0.438425 5_2:-71440871 None:intergenic
TGGTGATGCTTTAAAGGTCC+TGG 0.447594 5_2:+71440999 Msa0786050:three_prime_UTR
AAAACTATCAGGCGACAAAA+AGG 0.447871 5_2:+71440010 Msa0786050:three_prime_UTR
CGGACTAGAATCTCCCCAAA+TGG 0.449661 5_2:-71440338 None:intergenic
GTTTATCTTCACCAGGCTGA+GGG 0.450494 5_2:-71443301 None:intergenic
TATAGAGAACTATGGATTCA+AGG 0.450901 5_2:+71439905 Msa0786050:three_prime_UTR
GGAAATGACAGCGGAGGAAG+AGG 0.451851 5_2:+71438740 Msa0786050:CDS
CGGCAGCATAAAGGGCAATA+TGG 0.452151 5_2:-71437187 None:intergenic
TTAAATATCAACACAGAGAC+AGG 0.452909 5_2:+71442106 Msa0786050:three_prime_UTR
ATCTGGGTAGATGTGCTTGA+TGG 0.453325 5_2:+71439619 Msa0786050:three_prime_UTR
GTATTGTTTCTATAGAGGTT+TGG 0.455628 5_2:+71444978 Msa0786050:three_prime_UTR
GACATGCCGTGGAAATTTGA+TGG 0.456430 5_2:+71440263 Msa0786050:three_prime_UTR
TGGATGGAAGTTACTTCTAC+AGG 0.458470 5_2:+71444242 Msa0786050:three_prime_UTR
TTCAGATAGCTTTGGATGCA+AGG 0.461333 5_2:+71444867 Msa0786050:three_prime_UTR
AACCCCACAGATGTCAACTT+TGG 0.462582 5_2:-71438615 None:intergenic
ATAACATGCTTCAGCATGTA+TGG 0.463137 5_2:+71439559 Msa0786050:three_prime_UTR
AAGGCGAAAACCAGTGGCCT+AGG 0.463286 5_2:+71445076 Msa0786050:three_prime_UTR
TCAGTTTAATGAATCTGCAT+TGG 0.465098 5_2:+71439127 Msa0786050:CDS
TGCTATTAATACGCCAGTGC+AGG 0.465264 5_2:+71443820 Msa0786050:three_prime_UTR
GAATTTCATTCTACCCCTGC+AGG 0.466319 5_2:+71441260 Msa0786050:three_prime_UTR
GTCTCGGTTTAACCATGAAA+AGG 0.467931 5_2:+71440043 Msa0786050:three_prime_UTR
AGCTAGACGGCCAAATCTGC+AGG 0.470127 5_2:+71442138 Msa0786050:three_prime_UTR
GGGCCATCAAAGGGAACCGC+CGG 0.472367 5_2:-71443760 None:intergenic
CAAGAAACACCTGTAGATCA+TGG 0.473009 5_2:+71439532 Msa0786050:three_prime_UTR
GCTTCCGACATTCATATACT+TGG 0.473838 5_2:-71440486 None:intergenic
TATACCTTCAATAGAGGCAC+TGG 0.474434 5_2:-71443326 None:intergenic
ATTCCTCTGAAACACAAGTT+AGG 0.474816 5_2:+71438775 Msa0786050:CDS
AAGCCTATCACTCTTAACTT+AGG 0.476021 5_2:+71445044 Msa0786050:three_prime_UTR
TGAGGGAATGCTAGTTGATC+GGG 0.476748 5_2:+71440370 Msa0786050:three_prime_UTR
TGATATGAAGGTGAAGAGCC+TGG 0.479538 5_2:+71440924 Msa0786050:three_prime_UTR
CTTGAGTGGCACCCTCAGCC+TGG 0.479651 5_2:+71443290 Msa0786050:three_prime_UTR
TCGTTTCCCTTACTCCCCAC+AGG 0.481287 5_2:+71437254 Msa0786050:CDS
TCTTCCTCAAAATCATATTG+AGG 0.482732 5_2:+71441110 Msa0786050:three_prime_UTR
TATAGTTGCTGATTATGGAC+AGG 0.484141 5_2:+71443036 Msa0786050:three_prime_UTR
TAGGTTAGCTGAAGGTAAGA+AGG 0.485568 5_2:+71438896 Msa0786050:CDS
TGATGCGACGTTTGATAGAA+AGG 0.487043 5_2:+71439220 Msa0786050:CDS
CACTTAAAATACATACCTGC+AGG 0.487980 5_2:-71441275 None:intergenic
GAGAGAAGAGCAAGAAGATA+AGG 0.488324 5_2:-71437233 None:intergenic
CAATCCTTAGAAAGTCCTAC+TGG 0.488554 5_2:-71443498 None:intergenic
CAGCGATCCTTCGATCATGA+AGG 0.488676 5_2:+71439681 Msa0786050:three_prime_UTR
ACTTTGAATATTCGCTCAGT+TGG 0.490185 5_2:-71440847 None:intergenic
GTTATCTCCCCATGATCTAC+AGG 0.491276 5_2:-71439541 None:intergenic
AAAAGTTGAAGGAGCTTGGA+TGG 0.491725 5_2:+71444226 Msa0786050:three_prime_UTR
AAGATAAGGAGAGGGAGAAA+GGG 0.495052 5_2:-71437219 None:intergenic
TGTTGATAGATTCAGGAAAT+GGG 0.495994 5_2:+71440442 Msa0786050:three_prime_UTR
AGTGGTTGGCCGTCAGTTAG+TGG 0.498020 5_2:+71440979 Msa0786050:three_prime_UTR
TATTAGCTTGGGCCATCAAA+GGG 0.499157 5_2:-71443769 None:intergenic
CCGGTGGAGATTTCCATTCA+AGG 0.499757 5_2:+71443210 Msa0786050:three_prime_UTR
TCGAGCTATACCTTCAATAG+AGG 0.499820 5_2:-71443332 None:intergenic
TTAACTTCTCAATTGCATAT+GGG 0.503171 5_2:+71443469 Msa0786050:three_prime_UTR
GTTGATCGGGAGTATCTTGA+AGG 0.503849 5_2:+71440383 Msa0786050:three_prime_UTR
ACTAACTGACGGCCAACCAC+TGG 0.504482 5_2:-71440977 None:intergenic
GGGAGAAAGGGCGAGAGAGA+CGG 0.507400 5_2:-71437207 None:intergenic
ATGCAGATTCATTAAACTGA+TGG 0.507911 5_2:-71439124 None:intergenic
GCATTCCCTCAGATTCCATT+CGG 0.508109 5_2:-71440358 None:intergenic
TTCCATCATGCTCTTACAGT+TGG 0.509562 5_2:-71443177 None:intergenic
ACAAGTTAGGAAGGTGGATG+TGG 0.516441 5_2:+71438788 Msa0786050:CDS
TTTCTGGTAAGTATTAGCTT+GGG 0.521971 5_2:-71443780 None:intergenic
CTGAGGGAATGCTAGTTGAT+CGG 0.522706 5_2:+71440369 Msa0786050:three_prime_UTR
GACATTCATATACTTGGCAT+CGG 0.523391 5_2:-71440480 None:intergenic
TAATTTCTCATACAAGAGTC+CGG 0.523514 5_2:+71438668 Msa0786050:CDS
GCTGATCTCATTCTCTTCAA+AGG 0.523673 5_2:+71439489 Msa0786050:three_prime_UTR
GTATTAGCTTGGGCCATCAA+AGG 0.524869 5_2:-71443770 None:intergenic
AGTGATTGAAGAAGGAAAGA+AGG 0.526922 5_2:+71440885 Msa0786050:three_prime_UTR
TGTCCAAAGTTGACATCTGT+GGG 0.527550 5_2:+71438612 Msa0786050:CDS
AGAGCAAGAAGATAAGGAGA+GGG 0.527695 5_2:-71437227 None:intergenic
AGTGAACCTGTGGGGAGTAA+GGG 0.527991 5_2:-71437260 None:intergenic
AGGACCGACGGAGTCGGCTG+AGG 0.529659 5_2:+71444691 Msa0786050:three_prime_UTR
GGACTAGAATCTCCCCAAAT+GGG 0.530098 5_2:-71440337 None:intergenic
CAGATCTTCAACAGGGGCAA+TGG 0.530689 5_2:-71440147 None:intergenic
AGAATATTCTTGCCATAGAA+GGG 0.531599 5_2:-71444749 None:intergenic
CTTCCTAACTTGTGTTTCAG+AGG 0.536664 5_2:-71438778 None:intergenic
AAAAGGTCATGTCAAGGTCT+CGG 0.537334 5_2:+71440027 Msa0786050:three_prime_UTR
ACATTCATATACTTGGCATC+GGG 0.539263 5_2:-71440479 None:intergenic
TTAAATAAACACAGTAACAC+TGG 0.542514 5_2:+71438636 Msa0786050:CDS
GTATCTTGAAGGCATAGAAA+AGG 0.545111 5_2:+71440394 Msa0786050:three_prime_UTR
AGATGATCACAGTAAAATAC+CGG 0.545217 5_2:+71439342 Msa0786050:CDS
ACACATTACTAGGGCGAGCC+CGG 0.546644 5_2:+71443741 Msa0786050:three_prime_UTR
TATGCGCACTGCTATTTCGA+AGG 0.547212 5_2:-71438563 None:intergenic
CACATAAAGCAGCAATTGCA+TGG 0.547794 5_2:-71441209 None:intergenic
TTAACTTAGGACGAAGCAAA+AGG 0.548842 5_2:+71445057 Msa0786050:three_prime_UTR
AAGAAACACCTGTAGATCAT+GGG 0.552327 5_2:+71439533 Msa0786050:three_prime_UTR
GCTTCCATTGGTCGGAGACA+AGG 0.553441 5_2:+71438981 Msa0786050:CDS
TTCATTGTAGAAATCATACA+TGG 0.555053 5_2:-71440306 None:intergenic
AAGCATTCATTGCTGCGCCT+GGG 0.555305 5_2:+71443005 Msa0786050:three_prime_UTR
GCGCAGCAATGAATGCTTGA+CGG 0.555456 5_2:-71443000 None:intergenic
AAGAGCAAGAAGATAAGGAG+AGG 0.555578 5_2:-71437228 None:intergenic
CCTTGAATGGAAATCTCCAC+CGG 0.556100 5_2:-71443210 None:intergenic
AGGATGCATTTGGTTCTGAA+AGG 0.557039 5_2:+71443430 Msa0786050:intron
GCCACTGAAAGAAAATTGGC+TGG 0.560792 5_2:+71438840 Msa0786050:CDS
ATAGATTTGCTTCCATTGGT+CGG 0.561336 5_2:+71438973 Msa0786050:CDS
TGAATATTGGCGCCCATTTG+GGG 0.562195 5_2:+71440325 Msa0786050:three_prime_UTR
CATGATGAAGTCATATTGGA+AGG 0.562543 5_2:+71444671 Msa0786050:three_prime_UTR
CACATGCATAAATAAGATGC+CGG 0.562708 5_2:-71439361 None:intergenic
GAACTGCAGAAGAAAGATCA+AGG 0.564336 5_2:+71438518 Msa0786050:intron
GGCCATCAAAGGGAACCGCC+GGG 0.569004 5_2:-71443759 None:intergenic
AAAGAAGTAAGGACCTGCAC+TGG 0.569132 5_2:-71443833 None:intergenic
TTGGCTGGTGGTGATAATAG+AGG 0.569314 5_2:+71438855 Msa0786050:CDS
GTTGATGAAGTGATTGAAGA+AGG 0.570389 5_2:+71440877 Msa0786050:three_prime_UTR
CAAGCTAATACTTACCAGAA+AGG 0.571604 5_2:+71443782 Msa0786050:three_prime_UTR
GTGGAAAGTTCAGGATTGCA+AGG 0.571641 5_2:-71438813 None:intergenic
CTCTGAAACACAAGTTAGGA+AGG 0.571756 5_2:+71438779 Msa0786050:CDS
GTTTACAGATTCTGAAACTG+TGG 0.574977 5_2:+71439100 Msa0786050:CDS
GATTCAGGAAATGGGCATGT+AGG 0.575492 5_2:+71440450 Msa0786050:three_prime_UTR
CTCTCTGCAGATCTTCAACA+GGG 0.577349 5_2:-71440154 None:intergenic
TCGGAGACAAGGTTCTTCTA+CGG 0.577616 5_2:+71438992 Msa0786050:CDS
CAGACGAAATGTTTCCAGCC+AGG 0.580445 5_2:-71441017 None:intergenic
GATGCTTTAAAGGTCCTGGC+TGG 0.580663 5_2:+71441003 Msa0786050:three_prime_UTR
TCTAGTCCGAATGGAATCTG+AGG 0.582143 5_2:+71440352 Msa0786050:three_prime_UTR
AGAACCTTGTCTCCGACCAA+TGG 0.583368 5_2:-71438985 None:intergenic
TGGGTAGATGTGCTTGATGG+TGG 0.584851 5_2:+71439622 Msa0786050:three_prime_UTR
GCAACCTCAGCCGACTCCGT+CGG 0.585157 5_2:-71444695 None:intergenic
GTAGGACTTTCTAAGGATTG+GGG 0.585947 5_2:+71443501 Msa0786050:three_prime_UTR
AATCTTGTACAGCAAGGTCA+TGG 0.587601 5_2:+71439026 Msa0786050:CDS
TATTTAATATTTAAGCAGCA+AGG 0.590152 5_2:+71437075 Msa0786050:intron
ATACCTTCAATAGAGGCACT+GGG 0.590460 5_2:-71443325 None:intergenic
TAACGAAGTGGACTGTGTAG+TGG 0.591404 5_2:-71437161 None:intergenic
GTAGATGTGCTTGATGGTGG+AGG 0.591487 5_2:+71439625 Msa0786050:three_prime_UTR
AGAGAGATGAGCGCGTACCT+TGG 0.591808 5_2:+71440171 Msa0786050:three_prime_UTR
GATATGAAGGTGAAGAGCCT+GGG 0.592747 5_2:+71440925 Msa0786050:three_prime_UTR
AGACGGAAAATCTTGTATCT+GGG 0.593781 5_2:+71439603 Msa0786050:three_prime_UTR
TGGGGAGATTCTAGTCCGAA+TGG 0.597551 5_2:+71440343 Msa0786050:three_prime_UTR
ACTTAAAATACATACCTGCA+GGG 0.599199 5_2:-71441274 None:intergenic
AAGTTCACCTTCATGATCGA+AGG 0.599962 5_2:-71439688 None:intergenic
TTCGTGATTGCAATCACAAG+AGG 0.602027 5_2:+71444895 Msa0786050:three_prime_UTR
ATTGGAAGGACCGACGGAGT+CGG 0.602601 5_2:+71444685 Msa0786050:three_prime_UTR
AAAAGGAAGTGCTTCTTGAG+TGG 0.603714 5_2:+71443276 Msa0786050:three_prime_UTR
ACCTTCAATAGAGGCACTGG+GGG 0.604803 5_2:-71443323 None:intergenic
TAATATTCCTCTAGCAGAGG+AGG 0.605870 5_2:+71439313 Msa0786050:CDS
GCAATCCAGATTGCTAGCAA+TGG 0.606866 5_2:+71438540 Msa0786050:CDS
GTGTCCAAAGTTGACATCTG+TGG 0.607559 5_2:+71438611 Msa0786050:CDS
TGCAGAAGACGCAACAATGG+AGG 0.608551 5_2:+71437138 Msa0786050:CDS
ATGTAAGTATGTATGACTCC+CGG 0.609494 5_2:+71445200 Msa0786050:three_prime_UTR
TTAACAACCTCCTCTGCTAG+AGG 0.611536 5_2:-71439320 None:intergenic
CTGATACAATGCACATGGCA+CGG 0.611585 5_2:+71439943 Msa0786050:three_prime_UTR
TTCATCAAGACAATTAAATG+GGG 0.616497 5_2:+71439974 Msa0786050:three_prime_UTR
GTTAGCAATCTTGTACAGCA+AGG 0.618152 5_2:+71439020 Msa0786050:CDS
TGCCAACTGTAAGAGCATGA+TGG 0.618720 5_2:+71443175 Msa0786050:three_prime_UTR
CTTGTGATTGCAATCACGAA+CGG 0.619909 5_2:-71444892 None:intergenic
AAATGTACACAGCCAGTGGT+TGG 0.625678 5_2:+71440965 Msa0786050:three_prime_UTR
TCATGCTGATACAATGCACA+TGG 0.625864 5_2:+71439938 Msa0786050:three_prime_UTR
GCAATATGGTCTTAACGAAG+TGG 0.629062 5_2:-71437173 None:intergenic
TGTAGACACAATGGTACTCG+CGG 0.629386 5_2:-71443721 None:intergenic
GCATATGGGAAGACTCCAGT+AGG 0.629397 5_2:+71443483 Msa0786050:three_prime_UTR
AGTTGCAGAAGACGCAACAA+TGG 0.631960 5_2:+71437135 Msa0786050:CDS
AAGGCAGAATAACATATCCA+AGG 0.632707 5_2:-71440188 None:intergenic
GATGCCAAGTATATGAATGT+CGG 0.635388 5_2:+71440482 Msa0786050:three_prime_UTR
AAGCAAAAGGCGAAAACCAG+TGG 0.637373 5_2:+71445070 Msa0786050:three_prime_UTR
CTAGTCCGAATGGAATCTGA+GGG 0.637970 5_2:+71440353 Msa0786050:three_prime_UTR
TAGTCAAAATAATTATACCT+CGG 0.641562 5_2:-71439387 None:intergenic
AAAGCATCACCACTAACTGA+CGG 0.648166 5_2:-71440988 None:intergenic
TGAAACACAAGTTAGGAAGG+TGG 0.648646 5_2:+71438782 Msa0786050:CDS
CTTAAAATACATACCTGCAG+GGG 0.648727 5_2:-71441273 None:intergenic
ATTGTGTCTACACATTACTA+GGG 0.650834 5_2:+71443732 Msa0786050:three_prime_UTR
CTGTCTTCAAGGTATAACCC+AGG 0.653955 5_2:-71440942 None:intergenic
TGATAATATTCCTCTAGCAG+AGG 0.658265 5_2:+71439310 Msa0786050:CDS
TCATCAAGACAATTAAATGG+GGG 0.662481 5_2:+71439975 Msa0786050:three_prime_UTR
TAGGACTTTCTAAGGATTGG+GGG 0.662909 5_2:+71443502 Msa0786050:three_prime_UTR
AGTTTAATGAATCTGCATTG+GGG 0.663025 5_2:+71439129 Msa0786050:CDS
TATTTAAGGAGCAGTGAACA+CGG 0.663222 5_2:-71442090 None:intergenic
TATTTATGCATGTGATACCG+AGG 0.664126 5_2:+71439370 Msa0786050:CDS
TATCTATGAAGATATTCTGG+TGG 0.666805 5_2:+71439286 Msa0786050:CDS
GAAGGTAAGAAGGAAATGAA+CGG 0.666938 5_2:+71438906 Msa0786050:CDS
GCAACTATAAGAGAATTCCC+AGG 0.667170 5_2:-71443022 None:intergenic
AGTCATATTGGAAGGACCGA+CGG 0.667225 5_2:+71444679 Msa0786050:three_prime_UTR
ATATTACCAAAACATCGCAG+TGG 0.667297 5_2:-71445019 None:intergenic
AGAAACACCTGTAGATCATG+GGG 0.669984 5_2:+71439534 Msa0786050:three_prime_UTR
CAGGACGCTTGTCAGCTAGA+CGG 0.670750 5_2:+71442125 Msa0786050:three_prime_UTR
GTAGACACAATGGTACTCGC+GGG 0.671277 5_2:-71443720 None:intergenic
ACAGAAATGTACACAGCCAG+TGG 0.671557 5_2:+71440961 Msa0786050:three_prime_UTR
GGTACACCATCAAATTTCCA+CGG 0.671583 5_2:-71440269 None:intergenic
CTGGTGGTGATAATAGAGGA+TGG 0.674612 5_2:+71438859 Msa0786050:CDS
ACATGCTTCAGCATGTATGG+TGG 0.676051 5_2:+71439562 Msa0786050:three_prime_UTR
AGGACTTTCTAAGGATTGGG+GGG 0.677653 5_2:+71443503 Msa0786050:three_prime_UTR
GGAGAGAGAGTGAACCTGTG+GGG 0.680031 5_2:-71437268 None:intergenic
TCTCTGCAGATCTTCAACAG+GGG 0.684398 5_2:-71440153 None:intergenic
GTTAGAGGAAATGACAGCGG+AGG 0.684510 5_2:+71438734 Msa0786050:CDS
CTAGTAATGTGTAGACACAA+TGG 0.707274 5_2:-71443730 None:intergenic
TACCTTCAATAGAGGCACTG+GGG 0.710971 5_2:-71443324 None:intergenic
AATTTGTATCATAGCACACA+TGG 0.711745 5_2:-71444193 None:intergenic
ACTGAAAGAAAATTGGCTGG+TGG 0.735472 5_2:+71438843 Msa0786050:CDS
CATGTTAGAGGAAATGACAG+CGG 0.737032 5_2:+71438731 Msa0786050:CDS
CATTACTAGGGCGAGCCCGG+CGG 0.739989 5_2:+71443744 Msa0786050:three_prime_UTR
GTCCAAAGTTGACATCTGTG+GGG 0.760382 5_2:+71438613 Msa0786050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAATATGTGATTTTTA+TGG + chr5_2:71436693-71436712 Msa0786050:intron 10.0%
!!! TACAAATATCATTTTTTTTA+AGG + chr5_2:71436974-71436993 Msa0786050:intron 10.0%
!! TTATAATTATAATACATTCA+GGG - chr5_2:71437804-71437823 None:intergenic 10.0%
!! TTTATAATTATAATACATTC+AGG - chr5_2:71437805-71437824 None:intergenic 10.0%
!!! ATGTTTTTTTTTAAAAACAT+TGG + chr5_2:71438025-71438044 Msa0786050:intron 10.0%
!! AAAAAAAAAAAAGGAAAAAA+AGG - chr5_2:71440561-71440580 None:intergenic 10.0%
!!! AAAGATATAAAACTATTTTT+AGG + chr5_2:71442555-71442574 Msa0786050:intron 10.0%
!! GAATATATTAAAAGAAATAA+AGG - chr5_2:71442643-71442662 None:intergenic 10.0%
!!! ATATATAATTGATTTTCAAA+AGG + chr5_2:71442903-71442922 Msa0786050:intron 10.0%
!!! ATAACAAACTCTTATTTTAT+GGG - chr5_2:71436503-71436522 None:intergenic 15.0%
!!! TATAACAAACTCTTATTTTA+TGG - chr5_2:71436504-71436523 None:intergenic 15.0%
!!! TTTTAAAAGAGATTCTTTTT+AGG + chr5_2:71436527-71436546 Msa0786050:intron 15.0%
!!! ATCACATATTTTTTAAGAAT+AGG - chr5_2:71436688-71436707 None:intergenic 15.0%
!!! TATTGAGCAAATTATTTTAA+TGG + chr5_2:71437713-71437732 Msa0786050:intron 15.0%
!!! TATAACAATTTTCTTTTTTG+AGG - chr5_2:71438355-71438374 None:intergenic 15.0%
!! ATATCATACAATGAAAATAA+AGG - chr5_2:71438498-71438517 None:intergenic 15.0%
!! GAAAAAATTACTAAAGTTAA+TGG + chr5_2:71439161-71439180 Msa0786050:CDS 15.0%
!!! ATTGTAAAAATATTGATTCT+TGG + chr5_2:71440619-71440638 Msa0786050:intron 15.0%
!! TATATTTCAATTCAATATTG+CGG - chr5_2:71441617-71441636 None:intergenic 15.0%
!!! TTAAGTTTTATTATCATTTC+TGG + chr5_2:71441703-71441722 Msa0786050:intron 15.0%
!!! AAATTTTAATAGATAAGTGA+TGG - chr5_2:71441866-71441885 None:intergenic 15.0%
!!! ATTAGAACATTTCATTTTAA+TGG + chr5_2:71442194-71442213 Msa0786050:intron 15.0%
!!! ACTTTAATTTTAAAGAACAA+GGG - chr5_2:71442445-71442464 None:intergenic 15.0%
!!! AACTTTAATTTTAAAGAACA+AGG - chr5_2:71442446-71442465 None:intergenic 15.0%
!!! TGTTCTTTAAAATTAAAGTT+TGG + chr5_2:71442446-71442465 Msa0786050:intron 15.0%
!!! TTATTAACTGTTTTCTTAAA+GGG - chr5_2:71443977-71443996 None:intergenic 15.0%
!!! ATTATTAACTGTTTTCTTAA+AGG - chr5_2:71443978-71443997 None:intergenic 15.0%
!! AATATGATAGATTTATAAGT+GGG - chr5_2:71444019-71444038 None:intergenic 15.0%
!! TTCTAATAATAAAAAGTTGA+AGG + chr5_2:71444215-71444234 Msa0786050:three_prime_UTR 15.0%
!! TATAGAAACAATACAATTTA+AGG - chr5_2:71444972-71444991 None:intergenic 15.0%
!! AACATAAATGAAATCGTTAA+AGG + chr5_2:71436309-71436328 Msa0786050:intron 20.0%
!!! ATTTTATATTTTTTCTTGGG+AGG + chr5_2:71436425-71436444 Msa0786050:intron 20.0%
!! AAAAACAAAAATCACTTTAG+AGG + chr5_2:71436812-71436831 Msa0786050:intron 20.0%
!!! CATTTTTTTTAAGGATTACA+TGG + chr5_2:71436983-71437002 Msa0786050:intron 20.0%
!! TATTTAATATTTAAGCAGCA+AGG + chr5_2:71437075-71437094 Msa0786050:intron 20.0%
!! TAAAAAAGAATTTGAAGACA+CGG - chr5_2:71437328-71437347 None:intergenic 20.0%
!!! TATAAAGTTTGAGAATTTTG+AGG + chr5_2:71437542-71437561 Msa0786050:intron 20.0%
!!! ATAGTGTAAAACTTGTTATT+AGG + chr5_2:71437623-71437642 Msa0786050:intron 20.0%
!!! TAGTGTAAAACTTGTTATTA+GGG + chr5_2:71437624-71437643 Msa0786050:intron 20.0%
!!! TGAGCAATTTTTTTTTTTTG+AGG + chr5_2:71437686-71437705 Msa0786050:intron 20.0%
!!! GAGCAATTTTTTTTTTTTGA+GGG + chr5_2:71437687-71437706 Msa0786050:intron 20.0%
!!! CAAATTATTTTAATGGATAG+TGG + chr5_2:71437720-71437739 Msa0786050:intron 20.0%
!! AACATATTCAACTATCTAAA+TGG - chr5_2:71437765-71437784 None:intergenic 20.0%
!! ATTGTTTAAGGAACATTAAA+AGG - chr5_2:71437936-71437955 None:intergenic 20.0%
!! AAAGAAAATTGTTATATCTC+TGG + chr5_2:71438359-71438378 Msa0786050:intron 20.0%
!! TAGTCAAAATAATTATACCT+CGG - chr5_2:71439390-71439409 None:intergenic 20.0%
!! ATAGGATTAAGAATGTATAA+GGG - chr5_2:71439733-71439752 None:intergenic 20.0%
!! ATTCATCAAGACAATTAAAT+GGG + chr5_2:71439973-71439992 Msa0786050:three_prime_UTR 20.0%
!! AACTATATTTGGTAAGAAAA+AGG + chr5_2:71440091-71440110 Msa0786050:three_prime_UTR 20.0%
!! ATGATTTCTACAATGAATAT+TGG + chr5_2:71440312-71440331 Msa0786050:three_prime_UTR 20.0%
!!! GTTTTCTTGATAAATATTTC+AGG - chr5_2:71440651-71440670 None:intergenic 20.0%
!!! TTCATATCACGAAATTTTTT+GGG - chr5_2:71440913-71440932 None:intergenic 20.0%
!!! GTATGTATTTTAAGTGTTTT+TGG + chr5_2:71441282-71441301 Msa0786050:intron 20.0%
!!! GTTTTTGGTCTATTTAATTA+TGG + chr5_2:71441297-71441316 Msa0786050:intron 20.0%
!! CACGTATTTAAAAAAGAATA+TGG - chr5_2:71441553-71441572 None:intergenic 20.0%
!!! TTTATTATCATTTCTGGAAT+TGG + chr5_2:71441709-71441728 Msa0786050:intron 20.0%
!!! GTTGATTCTAAATTCTTAAT+TGG + chr5_2:71442312-71442331 Msa0786050:intron 20.0%
!!! AAAAGGAGATATTACATTTT+AGG - chr5_2:71442360-71442379 None:intergenic 20.0%
!! TTGTTAAACATACAATCATT+TGG + chr5_2:71442793-71442812 Msa0786050:intron 20.0%
!! GAATTCAACTTAAAATCATT+GGG - chr5_2:71442851-71442870 None:intergenic 20.0%
!! AGAATTCAACTTAAAATCAT+TGG - chr5_2:71442852-71442871 None:intergenic 20.0%
!! TGAATTCTGATATTCTTATT+TGG + chr5_2:71442864-71442883 Msa0786050:intron 20.0%
!!! GAATTCTGATATTCTTATTT+GGG + chr5_2:71442865-71442884 Msa0786050:intron 20.0%
!! AATAGAGAATGAACAAATTA+TGG - chr5_2:71443388-71443407 None:intergenic 20.0%
!!! TATTAACTGTTTTCTTAAAG+GGG - chr5_2:71443976-71443995 None:intergenic 20.0%
!! GAATATGATAGATTTATAAG+TGG - chr5_2:71444020-71444039 None:intergenic 20.0%
!! TGACGTTAAATACAATTAAA+CGG - chr5_2:71444093-71444112 None:intergenic 20.0%
!!! TACCTTATTAATTTTTGCTA+AGG + chr5_2:71444624-71444643 Msa0786050:intron 20.0%
!! AACCTTAGCAAAAATTAATA+AGG - chr5_2:71444629-71444648 None:intergenic 20.0%
!!! AAATTGTATTGTTTCTATAG+AGG + chr5_2:71444973-71444992 Msa0786050:three_prime_UTR 20.0%
!!! TTTTTACTGATTTAGATGAT+CGG + chr5_2:71445100-71445119 Msa0786050:three_prime_UTR 20.0%
!! ATTAGATACACATTCAAAAA+AGG - chr5_2:71445129-71445148 None:intergenic 20.0%
! TCTAAGAAAACGTAGTAAAA+AGG - chr5_2:71436616-71436635 None:intergenic 25.0%
! ATATGTAAAAGAGAACAACA+AGG - chr5_2:71436899-71436918 None:intergenic 25.0%
! GTACAAAAGTTGTACTAAAA+TGG + chr5_2:71436948-71436967 Msa0786050:intron 25.0%
! AAAAAAGAATTTGAAGACAC+GGG - chr5_2:71437327-71437346 None:intergenic 25.0%
! TGAAGAAAAGATGCAAAATT+TGG - chr5_2:71437354-71437373 None:intergenic 25.0%
!! ATTTTGCATCTTTTCTTCAT+TGG + chr5_2:71437355-71437374 Msa0786050:intron 25.0%
!! TTTTGCATCTTTTCTTCATT+GGG + chr5_2:71437356-71437375 Msa0786050:intron 25.0%
! GGGATTAATTATTGTTAATG+TGG + chr5_2:71437657-71437676 Msa0786050:intron 25.0%
! TTAGTCCTAAAATGTTTCTT+TGG + chr5_2:71438203-71438222 Msa0786050:intron 25.0%
!! ACTAACCAAAGAAACATTTT+AGG - chr5_2:71438211-71438230 None:intergenic 25.0%
! TATGTGTGGTAAAATAATAC+AGG - chr5_2:71438397-71438416 None:intergenic 25.0%
! TTAAATAAACACAGTAACAC+TGG + chr5_2:71438636-71438655 Msa0786050:CDS 25.0%
! AAATACGAGAGAAAAAGTAA+TGG + chr5_2:71438936-71438955 Msa0786050:CDS 25.0%
! GATAGGATTAAGAATGTATA+AGG - chr5_2:71439734-71439753 None:intergenic 25.0%
! GATTCATCAAGACAATTAAA+TGG + chr5_2:71439972-71439991 Msa0786050:three_prime_UTR 25.0%
! TTCATCAAGACAATTAAATG+GGG + chr5_2:71439974-71439993 Msa0786050:three_prime_UTR 25.0%
! TATTCTCTTGAAAAACTATC+AGG + chr5_2:71439999-71440018 Msa0786050:three_prime_UTR 25.0%
! GTGTCAATGAAAACTATATT+TGG + chr5_2:71440080-71440099 Msa0786050:three_prime_UTR 25.0%
! AAGAAAAAGGTGAAAAAAGA+TGG + chr5_2:71440104-71440123 Msa0786050:three_prime_UTR 25.0%
! TTCATTGTAGAAATCATACA+TGG - chr5_2:71440309-71440328 None:intergenic 25.0%
!!! CTTCATATCACGAAATTTTT+TGG - chr5_2:71440914-71440933 None:intergenic 25.0%
! CAAAAAATTTCGTGATATGA+AGG + chr5_2:71440912-71440931 Msa0786050:three_prime_UTR 25.0%
!!! CTCTATTTATTTTCACTACA+AGG - chr5_2:71441333-71441352 None:intergenic 25.0%
! AAAATATCATCAATTTCCTG+TGG - chr5_2:71441502-71441521 None:intergenic 25.0%
!! TTACCTGTTATGTTTTACTA+AGG + chr5_2:71441527-71441546 Msa0786050:intron 25.0%
!!! CTTTTTTAAATACGTGATGT+TGG + chr5_2:71441557-71441576 Msa0786050:intron 25.0%
! TTAGTTCATCATTGTCATAA+GGG - chr5_2:71441758-71441777 None:intergenic 25.0%
!! TTTAGTTCATCATTGTCATA+AGG - chr5_2:71441759-71441778 None:intergenic 25.0%
! TTCATAGTTTCTTTATGTCA+GGG + chr5_2:71441943-71441962 Msa0786050:intron 25.0%
! TTCTAAATTGCATGACTTAA+TGG + chr5_2:71442164-71442183 Msa0786050:intron 25.0%
! TCTAAATTGCATGACTTAAT+GGG + chr5_2:71442165-71442184 Msa0786050:intron 25.0%
!!! AGAACATTTCATTTTAATGG+TGG + chr5_2:71442197-71442216 Msa0786050:intron 25.0%
! GATTCTAAATTCTTAATTGG+TGG + chr5_2:71442315-71442334 Msa0786050:intron 25.0%
!! ATGTAATATCTCCTTTTAGT+AGG + chr5_2:71442363-71442382 Msa0786050:intron 25.0%
!! AATGGATTTACATGTCTAAT+AGG - chr5_2:71442396-71442415 None:intergenic 25.0%
! AAGAAACATCTAATCAAACT+TGG + chr5_2:71442673-71442692 Msa0786050:intron 25.0%
! GTATGTAAAATTGTATGAAG+AGG - chr5_2:71442725-71442744 None:intergenic 25.0%
! TGATTGTATGTTTAACAAAG+TGG - chr5_2:71442791-71442810 None:intergenic 25.0%
! AAACATACAATCATTTGGAT+TGG + chr5_2:71442798-71442817 Msa0786050:intron 25.0%
! TTAACTTCTCAATTGCATAT+GGG + chr5_2:71443469-71443488 Msa0786050:three_prime_UTR 25.0%
!! ATAGAAAAGAAGTTTTGCAA+TGG + chr5_2:71443675-71443694 Msa0786050:three_prime_UTR 25.0%
! TAGTCTATTCAAAAGAAGTA+AGG - chr5_2:71443847-71443866 None:intergenic 25.0%
! AATACAATCAGTTACATCTT+TGG + chr5_2:71443944-71443963 Msa0786050:intron 25.0%
! ATGATACAAATCTTTCTCTA+TGG + chr5_2:71444126-71444145 Msa0786050:intron 25.0%
! TGATACAAATCTTTCTCTAT+GGG + chr5_2:71444127-71444146 Msa0786050:intron 25.0%
!!! TTTTTCTTGCTCACTTTTAT+TGG + chr5_2:71444296-71444315 Msa0786050:intron 25.0%
! AATTGAAAGATAAGAGAAGT+TGG + chr5_2:71444338-71444357 Msa0786050:intron 25.0%
! TACAAAATGTTGCCAAATAT+TGG + chr5_2:71444460-71444479 Msa0786050:intron 25.0%
!! TTTGCTAAGGTTTTTGAATA+TGG + chr5_2:71444637-71444656 Msa0786050:intron 25.0%
! TTTATACATTCAGATAGCTT+TGG + chr5_2:71444859-71444878 Msa0786050:three_prime_UTR 25.0%
!!! TTTTACTGATTTAGATGATC+GGG + chr5_2:71445101-71445120 Msa0786050:three_prime_UTR 25.0%
! ATCAAGCAAAAAAACCATAT+CGG - chr5_2:71445173-71445192 None:intergenic 25.0%
!!! TTATATTTTTTCTTGGGAGG+AGG + chr5_2:71436428-71436447 Msa0786050:intron 30.0%
AGGGAATTTACCTAACAAAT+TGG + chr5_2:71436451-71436470 Msa0786050:intron 30.0%
! AAGTGAATCACCAATTTGTT+AGG - chr5_2:71436464-71436483 None:intergenic 30.0%
GAAAGAAAGAGAAAAAGAGA+AGG - chr5_2:71437292-71437311 None:intergenic 30.0%
! TCATTGGGTCTTTGAATTTT+TGG + chr5_2:71437371-71437390 Msa0786050:intron 30.0%
TGTTATTAGGGATGATATAC+TGG + chr5_2:71437636-71437655 Msa0786050:intron 30.0%
GTTATTAGGGATGATATACT+GGG + chr5_2:71437637-71437656 Msa0786050:intron 30.0%
GCAATACTCATTTGTAATGA+GGG - chr5_2:71437984-71438003 None:intergenic 30.0%
AGCAATACTCATTTGTAATG+AGG - chr5_2:71437985-71438004 None:intergenic 30.0%
AATTTCTTGAAAGATGACGT+AGG - chr5_2:71438117-71438136 None:intergenic 30.0%
TAATTTCTCATACAAGAGTC+CGG + chr5_2:71438668-71438687 Msa0786050:CDS 30.0%
! GATGGACTTTAGCAAAAAAT+AGG + chr5_2:71438877-71438896 Msa0786050:CDS 30.0%
! TCTAATAGATTTGCTTCCAT+TGG + chr5_2:71438969-71438988 Msa0786050:CDS 30.0%
ATGCAGATTCATTAAACTGA+TGG - chr5_2:71439127-71439146 None:intergenic 30.0%
TCAGTTTAATGAATCTGCAT+TGG + chr5_2:71439127-71439146 Msa0786050:CDS 30.0%
CAGTTTAATGAATCTGCATT+GGG + chr5_2:71439128-71439147 Msa0786050:CDS 30.0%
AGTTTAATGAATCTGCATTG+GGG + chr5_2:71439129-71439148 Msa0786050:CDS 30.0%
!! AGTTAATGGTGATGATGTTT+TGG + chr5_2:71439175-71439194 Msa0786050:CDS 30.0%
TCGTATCTATGAAGATATTC+TGG + chr5_2:71439283-71439302 Msa0786050:CDS 30.0%
TATCTATGAAGATATTCTGG+TGG + chr5_2:71439286-71439305 Msa0786050:CDS 30.0%
AGATGATCACAGTAAAATAC+CGG + chr5_2:71439342-71439361 Msa0786050:CDS 30.0%
! TTCTTGTTTGACATCTATCT+TGG - chr5_2:71439518-71439537 None:intergenic 30.0%
TTTCTGCTGTATGAATGATA+TGG + chr5_2:71439797-71439816 Msa0786050:intron 30.0%
TGTCATGTTATAGAGAACTA+TGG + chr5_2:71439897-71439916 Msa0786050:three_prime_UTR 30.0%
TATAGAGAACTATGGATTCA+AGG + chr5_2:71439905-71439924 Msa0786050:three_prime_UTR 30.0%
TCATCAAGACAATTAAATGG+GGG + chr5_2:71439975-71439994 Msa0786050:three_prime_UTR 30.0%
AACCATGAAAAGGATTTGAT+TGG + chr5_2:71440053-71440072 Msa0786050:three_prime_UTR 30.0%
! TACCAATCAAATCCTTTTCA+TGG - chr5_2:71440058-71440077 None:intergenic 30.0%
TGTCTAAAAGATAGCTCTTT+AGG - chr5_2:71440247-71440266 None:intergenic 30.0%
! TGTTGATAGATTCAGGAAAT+GGG + chr5_2:71440442-71440461 Msa0786050:three_prime_UTR 30.0%
TCAATCACTTCATCAACATT+GGG - chr5_2:71440874-71440893 None:intergenic 30.0%
TTCAATCACTTCATCAACAT+TGG - chr5_2:71440875-71440894 None:intergenic 30.0%
TCTTCCTCAAAATCATATTG+AGG + chr5_2:71441110-71441129 Msa0786050:three_prime_UTR 30.0%
! GAAACCTCAATATGATTTTG+AGG - chr5_2:71441117-71441136 None:intergenic 30.0%
!! AAAGTTGATAACTCTGCATA+TGG + chr5_2:71441138-71441157 Msa0786050:three_prime_UTR 30.0%
ACTTAAAATACATACCTGCA+GGG - chr5_2:71441277-71441296 None:intergenic 30.0%
! TTATTTTCACTACAAGGAAC+TGG - chr5_2:71441327-71441346 None:intergenic 30.0%
CTTCATAGTTTCTTTATGTC+AGG + chr5_2:71441942-71441961 Msa0786050:intron 30.0%
! TGTCTCTGTGTTGATATTTA+AGG - chr5_2:71442107-71442126 None:intergenic 30.0%
TTAAATATCAACACAGAGAC+AGG + chr5_2:71442106-71442125 Msa0786050:three_prime_UTR 30.0%
! TTTAGAATTACCTGCAGATT+TGG - chr5_2:71442151-71442170 None:intergenic 30.0%
AATAGTGCTTACAAAATTCC+AGG - chr5_2:71442233-71442252 None:intergenic 30.0%
TTTGTGCATGCATGTTTAAT+TGG + chr5_2:71442275-71442294 Msa0786050:intron 30.0%
TAGACATGTAAATCCATTCT+TGG + chr5_2:71442398-71442417 Msa0786050:intron 30.0%
AGACATGTAAATCCATTCTT+GGG + chr5_2:71442399-71442418 Msa0786050:intron 30.0%
GAAACTGCAGAAAATAAAAG+AGG + chr5_2:71442468-71442487 Msa0786050:intron 30.0%
AAAGAGGTCGAATAGTTATA+TGG + chr5_2:71442484-71442503 Msa0786050:intron 30.0%
AAGAGGTCGAATAGTTATAT+GGG + chr5_2:71442485-71442504 Msa0786050:intron 30.0%
!! CTAATCAAACTTGGTTTGTT+TGG + chr5_2:71442682-71442701 Msa0786050:intron 30.0%
AAAATTGTATGAAGAGGCTT+TGG - chr5_2:71442719-71442738 None:intergenic 30.0%
! TCTCTTATAGTTGCTGATTA+TGG + chr5_2:71443031-71443050 Msa0786050:three_prime_UTR 30.0%
GTTCATATCACATATCTGTT+TGG + chr5_2:71443067-71443086 Msa0786050:intron 30.0%
! TTTTGTTACAGCTTGAACTT+AGG + chr5_2:71443138-71443157 Msa0786050:intron 30.0%
CTTAACTTCTCAATTGCATA+TGG + chr5_2:71443468-71443487 Msa0786050:three_prime_UTR 30.0%
GACAACGAAATAATAAATCG+TGG - chr5_2:71443580-71443599 None:intergenic 30.0%
CGATTTATTATTTCGTTGTC+AGG + chr5_2:71443580-71443599 Msa0786050:intron 30.0%
ATTGTGTCTACACATTACTA+GGG + chr5_2:71443732-71443751 Msa0786050:three_prime_UTR 30.0%
! TTTCTGGTAAGTATTAGCTT+GGG - chr5_2:71443783-71443802 None:intergenic 30.0%
!! GAAATAGTCTGTTTTTCTTC+TGG - chr5_2:71443906-71443925 None:intergenic 30.0%
! AGACTATTTCTTACTAGACT+AGG + chr5_2:71443916-71443935 Msa0786050:intron 30.0%
TAGTTCAACTAGTGCTTTAT+AGG + chr5_2:71444059-71444078 Msa0786050:intron 30.0%
!! TCTGATTTGTTAAATGCAAC+AGG + chr5_2:71444152-71444171 Msa0786050:intron 30.0%
!! CTGATTTGTTAAATGCAACA+GGG + chr5_2:71444153-71444172 Msa0786050:intron 30.0%
AATTTGTATCATAGCACACA+TGG - chr5_2:71444196-71444215 None:intergenic 30.0%
AATAAAAAGTTGAAGGAGCT+TGG + chr5_2:71444222-71444241 Msa0786050:three_prime_UTR 30.0%
AGCAAGAAAAATGAGCAATA+AGG - chr5_2:71444287-71444306 None:intergenic 30.0%
! TAACAATATTGGTGGTTGTA+TGG - chr5_2:71444364-71444383 None:intergenic 30.0%
ATAGCAATAGCACCAATATT+TGG - chr5_2:71444475-71444494 None:intergenic 30.0%
AGAATATTCTTGCCATAGAA+GGG - chr5_2:71444752-71444771 None:intergenic 30.0%
AAGAATATTCTTGCCATAGA+AGG - chr5_2:71444753-71444772 None:intergenic 30.0%
AAATTGGTACTCTGCAAAAT+AGG + chr5_2:71444808-71444827 Msa0786050:three_prime_UTR 30.0%
GTATACTACATGACTGTATT+TGG + chr5_2:71444830-71444849 Msa0786050:three_prime_UTR 30.0%
!! GTATTGTTTCTATAGAGGTT+TGG + chr5_2:71444978-71444997 Msa0786050:three_prime_UTR 30.0%
TCTAAATCAGTAAAAAGCCT+AGG - chr5_2:71445096-71445115 None:intergenic 30.0%
! ATGTTGTACATGTTTTCAAC+CGG - chr5_2:71445222-71445241 None:intergenic 30.0%
CTTTGCACATACATATTGAT+TGG + chr5_2:71445254-71445273 Msa0786050:three_prime_UTR 30.0%
! TAGTGACTATTTAGAGTGTT+TGG + chr5_2:71445281-71445300 Msa0786050:three_prime_UTR 30.0%
TAAAGCAAGTGACACTTACA+TGG - chr5_2:71436275-71436294 None:intergenic 35.0%
! GAACATAATGCTGATTACAG+TGG + chr5_2:71437499-71437518 Msa0786050:intron 35.0%
AAGAACTAACAAGTGCACTT+AGG + chr5_2:71437823-71437842 Msa0786050:intron 35.0%
AGAACTAACAAGTGCACTTA+GGG + chr5_2:71437824-71437843 Msa0786050:intron 35.0%
GGTTGTAACATTTCTCAACT+CGG - chr5_2:71438096-71438115 None:intergenic 35.0%
! TCGTTGAATGTGTCTTTTGT+TGG + chr5_2:71438175-71438194 Msa0786050:intron 35.0%
GTATCTTCTGATTGTGAGTT+TGG + chr5_2:71438248-71438267 Msa0786050:intron 35.0%
ACTAACACAAGACACATTCA+AGG + chr5_2:71438282-71438301 Msa0786050:intron 35.0%
CTTTGTTCTCTAAATGTGTG+AGG - chr5_2:71438323-71438342 None:intergenic 35.0%
TGTTATATCTCTGGTACATG+TGG + chr5_2:71438368-71438387 Msa0786050:intron 35.0%
CACACATACACAGTTATAGA+GGG + chr5_2:71438409-71438428 Msa0786050:intron 35.0%
!!! AGAGGGAGTTTTTTCTTATC+TGG + chr5_2:71438426-71438445 Msa0786050:intron 35.0%
! TTTTCTTATCTGGTGCATTG+CGG + chr5_2:71438436-71438455 Msa0786050:intron 35.0%
TTCATAAATGTAACGCGAAC+CGG - chr5_2:71438690-71438709 None:intergenic 35.0%
!! ATTCCTCTGAAACACAAGTT+AGG + chr5_2:71438775-71438794 Msa0786050:CDS 35.0%
AACAGCCACTGAAAGAAAAT+TGG + chr5_2:71438836-71438855 Msa0786050:CDS 35.0%
! GCAAAAAATAGGTTAGCTGA+AGG + chr5_2:71438888-71438907 Msa0786050:CDS 35.0%
GAAGGTAAGAAGGAAATGAA+CGG + chr5_2:71438906-71438925 Msa0786050:CDS 35.0%
! ATAGATTTGCTTCCATTGGT+CGG + chr5_2:71438973-71438992 Msa0786050:CDS 35.0%
!! GTTTACAGATTCTGAAACTG+TGG + chr5_2:71439100-71439119 Msa0786050:CDS 35.0%
!! TAATGGTGATGATGTTTTGG+AGG + chr5_2:71439178-71439197 Msa0786050:CDS 35.0%
TGATAATATTCCTCTAGCAG+AGG + chr5_2:71439310-71439329 Msa0786050:CDS 35.0%
CACATGCATAAATAAGATGC+CGG - chr5_2:71439364-71439383 None:intergenic 35.0%
TATTTATGCATGTGATACCG+AGG + chr5_2:71439370-71439389 Msa0786050:CDS 35.0%
! GACTATTTTCACTTGTGTGT+CGG + chr5_2:71439405-71439424 Msa0786050:three_prime_UTR 35.0%
AAGAAACACCTGTAGATCAT+GGG + chr5_2:71439533-71439552 Msa0786050:three_prime_UTR 35.0%
ATAACATGCTTCAGCATGTA+TGG + chr5_2:71439559-71439578 Msa0786050:three_prime_UTR 35.0%
AGACGGAAAATCTTGTATCT+GGG + chr5_2:71439603-71439622 Msa0786050:three_prime_UTR 35.0%
CTGTATGAATGATATGGCTT+TGG + chr5_2:71439803-71439822 Msa0786050:intron 35.0%
AACTATGGATTCAAGGTTTC+TGG + chr5_2:71439912-71439931 Msa0786050:three_prime_UTR 35.0%
AAAACTATCAGGCGACAAAA+AGG + chr5_2:71440010-71440029 Msa0786050:three_prime_UTR 35.0%
GTGAAAAAAGATGGATCTGA+GGG + chr5_2:71440113-71440132 Msa0786050:three_prime_UTR 35.0%
AAGGCAGAATAACATATCCA+AGG - chr5_2:71440191-71440210 None:intergenic 35.0%
!! CAAAGTGCTTTTAGCATCTA+AGG - chr5_2:71440210-71440229 None:intergenic 35.0%
! GTATCTTGAAGGCATAGAAA+AGG + chr5_2:71440394-71440413 Msa0786050:three_prime_UTR 35.0%
! AGATAGCTGTTGATAGATTC+AGG + chr5_2:71440435-71440454 Msa0786050:three_prime_UTR 35.0%
! CTGTTGATAGATTCAGGAAA+TGG + chr5_2:71440441-71440460 Msa0786050:three_prime_UTR 35.0%
ACATTCATATACTTGGCATC+GGG - chr5_2:71440482-71440501 None:intergenic 35.0%
GACATTCATATACTTGGCAT+CGG - chr5_2:71440483-71440502 None:intergenic 35.0%
GATGCCAAGTATATGAATGT+CGG + chr5_2:71440482-71440501 Msa0786050:three_prime_UTR 35.0%
! TGTTGATTGAGAAGGAGAAA+AGG + chr5_2:71440737-71440756 Msa0786050:intron 35.0%
ACTTTGAATATTCGCTCAGT+TGG - chr5_2:71440850-71440869 None:intergenic 35.0%
! GTTGATGAAGTGATTGAAGA+AGG + chr5_2:71440877-71440896 Msa0786050:three_prime_UTR 35.0%
AGTGATTGAAGAAGGAAAGA+AGG + chr5_2:71440885-71440904 Msa0786050:three_prime_UTR 35.0%
TGTGTACATTTCTGTCTTCA+AGG - chr5_2:71440956-71440975 None:intergenic 35.0%
! AGTTAGTGGTGATGCTTTAA+AGG + chr5_2:71440993-71441012 Msa0786050:three_prime_UTR 35.0%
GTTCATCATCATCATCATCA+TGG - chr5_2:71441083-71441102 None:intergenic 35.0%
! GATGATGATGATGATGAACA+TGG + chr5_2:71441084-71441103 Msa0786050:three_prime_UTR 35.0%
CTTAAAATACATACCTGCAG+GGG - chr5_2:71441276-71441295 None:intergenic 35.0%
CACTTAAAATACATACCTGC+AGG - chr5_2:71441278-71441297 None:intergenic 35.0%
! CGCACATCTATAATTTGTGA+AGG + chr5_2:71441379-71441398 Msa0786050:intron 35.0%
CAAGATCACCAAACTTCAAA+TGG - chr5_2:71441411-71441430 None:intergenic 35.0%
CTTTCATATATCTTGTCCAC+AGG + chr5_2:71441483-71441502 Msa0786050:intron 35.0%
! TGGCCTTAGTAAAACATAAC+AGG - chr5_2:71441533-71441552 None:intergenic 35.0%
ACAAACTTGAAGTCTCTGAA+TGG - chr5_2:71441658-71441677 None:intergenic 35.0%
ATTCAGATAAGCTGTTTGCA+AGG - chr5_2:71441817-71441836 None:intergenic 35.0%
AATAGATAAGTGATGGCACA+TGG - chr5_2:71441859-71441878 None:intergenic 35.0%
TATTTAAGGAGCAGTGAACA+CGG - chr5_2:71442093-71442112 None:intergenic 35.0%
TAGGAACAACTCCTACTAAA+AGG - chr5_2:71442377-71442396 None:intergenic 35.0%
AAGAACAAGGGAAGAAAGAA+TGG - chr5_2:71442433-71442452 None:intergenic 35.0%
! TTCAACTTCAAAGTGCTCTT+TGG + chr5_2:71442518-71442537 Msa0786050:intron 35.0%
!! ACTCGAGTTGAAATGTTACA+TGG - chr5_2:71442584-71442603 None:intergenic 35.0%
!! ATTTCAACTCGAGTTGATTC+TGG + chr5_2:71442590-71442609 Msa0786050:intron 35.0%
GACATTGTAAATTTGAGAGG+AGG - chr5_2:71442619-71442638 None:intergenic 35.0%
GGAGACATTGTAAATTTGAG+AGG - chr5_2:71442622-71442641 None:intergenic 35.0%
CATAATGTAGCCCAACTTTA+GGG - chr5_2:71442825-71442844 None:intergenic 35.0%
GAATTAGAATCAACCTGCTT+TGG + chr5_2:71442958-71442977 Msa0786050:intron 35.0%
!!! ATGCTTGACGGATTTTGTAT+CGG - chr5_2:71442991-71443010 None:intergenic 35.0%
! TATAGTTGCTGATTATGGAC+AGG + chr5_2:71443036-71443055 Msa0786050:three_prime_UTR 35.0%
!!! ATGATGGAAGCTTTTAAAGC+CGG + chr5_2:71443191-71443210 Msa0786050:three_prime_UTR 35.0%
TATTCATTGCAGTCCTTGAA+TGG - chr5_2:71443226-71443245 None:intergenic 35.0%
TCAACTGCTTCACGAATATA+TGG - chr5_2:71443254-71443273 None:intergenic 35.0%
! GAAGGTATAGCTCGAATTAT+CGG + chr5_2:71443340-71443359 Msa0786050:intron 35.0%
!! TATTTTTGCCCCTCCATTTT+AGG + chr5_2:71443410-71443429 Msa0786050:intron 35.0%
AAATGCATCCTAAAATGGAG+GGG - chr5_2:71443421-71443440 None:intergenic 35.0%
CAAATGCATCCTAAAATGGA+GGG - chr5_2:71443422-71443441 None:intergenic 35.0%
GAACCAAATGCATCCTAAAA+TGG - chr5_2:71443426-71443445 None:intergenic 35.0%
! AGTAGGACTTTCTAAGGATT+GGG + chr5_2:71443500-71443519 Msa0786050:three_prime_UTR 35.0%
! GTTCACATGTTTTCTCTTTC+AGG + chr5_2:71443607-71443626 Msa0786050:intron 35.0%
CTAAGAAAACAGTTGACCTT+TGG + chr5_2:71443645-71443664 Msa0786050:three_prime_UTR 35.0%
! CTTTTCTATCGTTGTACCAA+AGG - chr5_2:71443664-71443683 None:intergenic 35.0%
CTAGTAATGTGTAGACACAA+TGG - chr5_2:71443733-71443752 None:intergenic 35.0%
CATTGTGTCTACACATTACT+AGG + chr5_2:71443731-71443750 Msa0786050:three_prime_UTR 35.0%
! CTTTCTGGTAAGTATTAGCT+TGG - chr5_2:71443784-71443803 None:intergenic 35.0%
CAAGCTAATACTTACCAGAA+AGG + chr5_2:71443782-71443801 Msa0786050:three_prime_UTR 35.0%
CCACCAATATTGTTAGATAG+CGG + chr5_2:71444369-71444388 Msa0786050:intron 35.0%
! GTTTTTGAATATGGCAAAGC+AGG + chr5_2:71444646-71444665 Msa0786050:intron 35.0%
GGTTCATGATGAAGTCATAT+TGG + chr5_2:71444667-71444686 Msa0786050:intron 35.0%
CATGATGAAGTCATATTGGA+AGG + chr5_2:71444671-71444690 Msa0786050:three_prime_UTR 35.0%
CTCTGGTGCTTCTATATTTA+AGG + chr5_2:71444924-71444943 Msa0786050:three_prime_UTR 35.0%
ATATTACCAAAACATCGCAG+TGG - chr5_2:71445022-71445041 None:intergenic 35.0%
AAGCCTATCACTCTTAACTT+AGG + chr5_2:71445044-71445063 Msa0786050:three_prime_UTR 35.0%
TTAACTTAGGACGAAGCAAA+AGG + chr5_2:71445057-71445076 Msa0786050:three_prime_UTR 35.0%
ATGTAAGTATGTATGACTCC+CGG + chr5_2:71445200-71445219 Msa0786050:three_prime_UTR 35.0%
! TGTTGTACATGTTTTCAACC+GGG - chr5_2:71445221-71445240 None:intergenic 35.0%
!!! TATTTTTTCTTGGGAGGAGG+AGG + chr5_2:71436431-71436450 Msa0786050:intron 40.0%
!!! ATTTTTTCTTGGGAGGAGGA+GGG + chr5_2:71436432-71436451 Msa0786050:intron 40.0%
! GCAATATGGTCTTAACGAAG+TGG - chr5_2:71437176-71437195 None:intergenic 40.0%
AAGATAAGGAGAGGGAGAAA+GGG - chr5_2:71437222-71437241 None:intergenic 40.0%
AGAGCAAGAAGATAAGGAGA+GGG - chr5_2:71437230-71437249 None:intergenic 40.0%
AAGAGCAAGAAGATAAGGAG+AGG - chr5_2:71437231-71437250 None:intergenic 40.0%
GAGAGAAGAGCAAGAAGATA+AGG - chr5_2:71437236-71437255 None:intergenic 40.0%
ACATTCAGGGACTACAATGA+CGG - chr5_2:71437791-71437810 None:intergenic 40.0%
GTTCCTTAAACAATGCCCTT+AGG + chr5_2:71437942-71437961 Msa0786050:intron 40.0%
!! TGTCCTAAGGGCATTGTTTA+AGG - chr5_2:71437948-71437967 None:intergenic 40.0%
CATGCTAACAAGTGTCCTAA+GGG - chr5_2:71437960-71437979 None:intergenic 40.0%
TCATGCTAACAAGTGTCCTA+AGG - chr5_2:71437961-71437980 None:intergenic 40.0%
! CAAATTTTCAACCCGTTTGC+CGG + chr5_2:71438049-71438068 Msa0786050:intron 40.0%
CCTCTATAACTGTGTATGTG+TGG - chr5_2:71438411-71438430 None:intergenic 40.0%
CCACACATACACAGTTATAG+AGG + chr5_2:71438408-71438427 Msa0786050:intron 40.0%
GAACTGCAGAAGAAAGATCA+AGG + chr5_2:71438518-71438537 Msa0786050:intron 40.0%
TGTCCAAAGTTGACATCTGT+GGG + chr5_2:71438612-71438631 Msa0786050:CDS 40.0%
CATGTTAGAGGAAATGACAG+CGG + chr5_2:71438731-71438750 Msa0786050:CDS 40.0%
! CTTCCTAACTTGTGTTTCAG+AGG - chr5_2:71438781-71438800 None:intergenic 40.0%
!! CTCTGAAACACAAGTTAGGA+AGG + chr5_2:71438779-71438798 Msa0786050:CDS 40.0%
TGAAACACAAGTTAGGAAGG+TGG + chr5_2:71438782-71438801 Msa0786050:CDS 40.0%
! TTTTCTTTCAGTGGCTGTTG+TGG - chr5_2:71438835-71438854 None:intergenic 40.0%
! ACCAGCCAATTTTCTTTCAG+TGG - chr5_2:71438844-71438863 None:intergenic 40.0%
ACTGAAAGAAAATTGGCTGG+TGG + chr5_2:71438843-71438862 Msa0786050:CDS 40.0%
! TAGGTTAGCTGAAGGTAAGA+AGG + chr5_2:71438896-71438915 Msa0786050:CDS 40.0%
GTTAGCAATCTTGTACAGCA+AGG + chr5_2:71439020-71439039 Msa0786050:CDS 40.0%
AATCTTGTACAGCAAGGTCA+TGG + chr5_2:71439026-71439045 Msa0786050:CDS 40.0%
TGATGCGACGTTTGATAGAA+AGG + chr5_2:71439220-71439239 Msa0786050:CDS 40.0%
TAATATTCCTCTAGCAGAGG+AGG + chr5_2:71439313-71439332 Msa0786050:CDS 40.0%
GCTGATCTCATTCTCTTCAA+AGG + chr5_2:71439489-71439508 Msa0786050:three_prime_UTR 40.0%
CAAGAAACACCTGTAGATCA+TGG + chr5_2:71439532-71439551 Msa0786050:three_prime_UTR 40.0%
AGAAACACCTGTAGATCATG+GGG + chr5_2:71439534-71439553 Msa0786050:three_prime_UTR 40.0%
GAGACGGAAAATCTTGTATC+TGG + chr5_2:71439602-71439621 Msa0786050:three_prime_UTR 40.0%
AAGTTCACCTTCATGATCGA+AGG - chr5_2:71439691-71439710 None:intergenic 40.0%
CTGCTTGTGCTGTAATTCTA+TGG + chr5_2:71439774-71439793 Msa0786050:intron 40.0%
TCATGCTGATACAATGCACA+TGG + chr5_2:71439938-71439957 Msa0786050:three_prime_UTR 40.0%
AAAAGGTCATGTCAAGGTCT+CGG + chr5_2:71440027-71440046 Msa0786050:three_prime_UTR 40.0%
GTCTCGGTTTAACCATGAAA+AGG + chr5_2:71440043-71440062 Msa0786050:three_prime_UTR 40.0%
GGTGAAAAAAGATGGATCTG+AGG + chr5_2:71440112-71440131 Msa0786050:three_prime_UTR 40.0%
GGTACACCATCAAATTTCCA+CGG - chr5_2:71440272-71440291 None:intergenic 40.0%
!! TTTGATGGTGTACCAGTTTC+TGG + chr5_2:71440278-71440297 Msa0786050:three_prime_UTR 40.0%
!! TTGATGGTGTACCAGTTTCT+GGG + chr5_2:71440279-71440298 Msa0786050:three_prime_UTR 40.0%
! TACATGGTTTTCCCAGAAAC+TGG - chr5_2:71440293-71440312 None:intergenic 40.0%
AATGAATATTGGCGCCCATT+TGG + chr5_2:71440323-71440342 Msa0786050:three_prime_UTR 40.0%
ATGAATATTGGCGCCCATTT+GGG + chr5_2:71440324-71440343 Msa0786050:three_prime_UTR 40.0%
AGCTATCTCTTGCTCTACTT+TGG - chr5_2:71440423-71440442 None:intergenic 40.0%
GCTTCCGACATTCATATACT+TGG - chr5_2:71440489-71440508 None:intergenic 40.0%
!! TTTTTGGTGGTACCTTGAAC+AGG + chr5_2:71440531-71440550 Msa0786050:three_prime_UTR 40.0%
! AAAAAAGGTGCACCTGTTCA+AGG - chr5_2:71440546-71440565 None:intergenic 40.0%
!! TGCATGTGTGTTGATTGAGA+AGG + chr5_2:71440729-71440748 Msa0786050:intron 40.0%
! AAAGCATCACCACTAACTGA+CGG - chr5_2:71440991-71441010 None:intergenic 40.0%
!! AGCCTTTTCTGCTTTTCCAA+CGG + chr5_2:71441164-71441183 Msa0786050:three_prime_UTR 40.0%
! CTTTTCCAACGGAGAAAGAA+GGG + chr5_2:71441175-71441194 Msa0786050:three_prime_UTR 40.0%
CACATAAAGCAGCAATTGCA+TGG - chr5_2:71441212-71441231 None:intergenic 40.0%
ACTATGAAGCTACGTAGAAC+AGG - chr5_2:71441931-71441950 None:intergenic 40.0%
!! AGCACTTTGAAGTTGAAGCA+TGG - chr5_2:71442515-71442534 None:intergenic 40.0%
! CGAGTTGAAATGTTACATGG+AGG - chr5_2:71442581-71442600 None:intergenic 40.0%
! TTTGGATTGGACCCTAAAGT+TGG + chr5_2:71442811-71442830 Msa0786050:intron 40.0%
! TTGGATTGGACCCTAAAGTT+GGG + chr5_2:71442812-71442831 Msa0786050:intron 40.0%
GCATAATGTAGCCCAACTTT+AGG - chr5_2:71442826-71442845 None:intergenic 40.0%
! TATCGGTCTTTTTCCAAAGC+AGG - chr5_2:71442974-71442993 None:intergenic 40.0%
GCAACTATAAGAGAATTCCC+AGG - chr5_2:71443025-71443044 None:intergenic 40.0%
ACAGCTTGAACTTAGGATTC+TGG + chr5_2:71443145-71443164 Msa0786050:intron 40.0%
TTCCATCATGCTCTTACAGT+TGG - chr5_2:71443180-71443199 None:intergenic 40.0%
TCGTGAAGCAGTTGAGAAAA+AGG + chr5_2:71443259-71443278 Msa0786050:three_prime_UTR 40.0%
!! AAAAGGAAGTGCTTCTTGAG+TGG + chr5_2:71443276-71443295 Msa0786050:three_prime_UTR 40.0%
!! ATACCTTCAATAGAGGCACT+GGG - chr5_2:71443328-71443347 None:intergenic 40.0%
! TATACCTTCAATAGAGGCAC+TGG - chr5_2:71443329-71443348 None:intergenic 40.0%
TCGAGCTATACCTTCAATAG+AGG - chr5_2:71443335-71443354 None:intergenic 40.0%
CCAAATGCATCCTAAAATGG+AGG - chr5_2:71443423-71443442 None:intergenic 40.0%
!!! CCTCCATTTTAGGATGCATT+TGG + chr5_2:71443420-71443439 Msa0786050:intron 40.0%
!! AGGATGCATTTGGTTCTGAA+AGG + chr5_2:71443430-71443449 Msa0786050:intron 40.0%
CAATCCTTAGAAAGTCCTAC+TGG - chr5_2:71443501-71443520 None:intergenic 40.0%
! CAGTAGGACTTTCTAAGGAT+TGG + chr5_2:71443499-71443518 Msa0786050:three_prime_UTR 40.0%
! GTAGGACTTTCTAAGGATTG+GGG + chr5_2:71443501-71443520 Msa0786050:three_prime_UTR 40.0%
! TAGGACTTTCTAAGGATTGG+GGG + chr5_2:71443502-71443521 Msa0786050:three_prime_UTR 40.0%
! AGAAGTTTTGCAATGGCAAG+AGG + chr5_2:71443682-71443701 Msa0786050:three_prime_UTR 40.0%
! TATTAGCTTGGGCCATCAAA+GGG - chr5_2:71443772-71443791 None:intergenic 40.0%
AAAAGTTGAAGGAGCTTGGA+TGG + chr5_2:71444226-71444245 Msa0786050:three_prime_UTR 40.0%
TGGATGGAAGTTACTTCTAC+AGG + chr5_2:71444242-71444261 Msa0786050:three_prime_UTR 40.0%
CCGCTATCTAACAATATTGG+TGG - chr5_2:71444372-71444391 None:intergenic 40.0%
GCACCGCTATCTAACAATAT+TGG - chr5_2:71444375-71444394 None:intergenic 40.0%
! AATTTTCGCTCGCTAAGTTG+TGG - chr5_2:71444405-71444424 None:intergenic 40.0%
TCGCACATTGTGGAAAATAG+TGG - chr5_2:71444528-71444547 None:intergenic 40.0%
ATGTTGTCAATCGCACATTG+TGG - chr5_2:71444538-71444557 None:intergenic 40.0%
TAATCTTGACCATGCATGTG+TGG - chr5_2:71444567-71444586 None:intergenic 40.0%
ATTCTTGCCATAGAAGGGTT+TGG - chr5_2:71444747-71444766 None:intergenic 40.0%
ATGCCAAGTGTGCTCAAAAT+TGG + chr5_2:71444792-71444811 Msa0786050:three_prime_UTR 40.0%
! GTACCAATTTTGAGCACACT+TGG - chr5_2:71444798-71444817 None:intergenic 40.0%
!! TTCAGATAGCTTTGGATGCA+AGG + chr5_2:71444867-71444886 Msa0786050:three_prime_UTR 40.0%
CTTGTGATTGCAATCACGAA+CGG - chr5_2:71444895-71444914 None:intergenic 40.0%
TTCGTGATTGCAATCACAAG+AGG + chr5_2:71444895-71444914 Msa0786050:three_prime_UTR 40.0%
TCGCAGTGGAAAAACTACAA+GGG - chr5_2:71445008-71445027 None:intergenic 40.0%
ATCGCAGTGGAAAAACTACA+AGG - chr5_2:71445009-71445028 None:intergenic 40.0%
! GTTTTTCCACTGCGATGTTT+TGG + chr5_2:71445013-71445032 Msa0786050:three_prime_UTR 40.0%
CGTCCTAAGTTAAGAGTGAT+AGG - chr5_2:71445050-71445069 None:intergenic 40.0%
! TCTTGCATCATGTACCGATA+TGG + chr5_2:71445156-71445175 Msa0786050:three_prime_UTR 40.0%
TGCGTCTTCTGCAACTTCAA+TGG - chr5_2:71437131-71437150 None:intergenic 45.0%
AGTTGCAGAAGACGCAACAA+TGG + chr5_2:71437135-71437154 Msa0786050:CDS 45.0%
!! TAACGAAGTGGACTGTGTAG+TGG - chr5_2:71437164-71437183 None:intergenic 45.0%
GAAGATAAGGAGAGGGAGAA+AGG - chr5_2:71437223-71437242 None:intergenic 45.0%
!! TGCACTTAGGGCATTGTTCA+AGG + chr5_2:71437836-71437855 Msa0786050:intron 45.0%
GCAATCCAGATTGCTAGCAA+TGG + chr5_2:71438540-71438559 Msa0786050:CDS 45.0%
!! TATGCGCACTGCTATTTCGA+AGG - chr5_2:71438566-71438585 None:intergenic 45.0%
GTGTCCAAAGTTGACATCTG+TGG + chr5_2:71438611-71438630 Msa0786050:CDS 45.0%
GTCCAAAGTTGACATCTGTG+GGG + chr5_2:71438613-71438632 Msa0786050:CDS 45.0%
AACCCCACAGATGTCAACTT+TGG - chr5_2:71438618-71438637 None:intergenic 45.0%
TGCATCAGCTAGCATGTTAG+AGG + chr5_2:71438719-71438738 Msa0786050:CDS 45.0%
ACAAGTTAGGAAGGTGGATG+TGG + chr5_2:71438788-71438807 Msa0786050:CDS 45.0%
GTGGAAAGTTCAGGATTGCA+AGG - chr5_2:71438816-71438835 None:intergenic 45.0%
GCCACTGAAAGAAAATTGGC+TGG + chr5_2:71438840-71438859 Msa0786050:CDS 45.0%
! TTGGCTGGTGGTGATAATAG+AGG + chr5_2:71438855-71438874 Msa0786050:CDS 45.0%
! CTGGTGGTGATAATAGAGGA+TGG + chr5_2:71438859-71438878 Msa0786050:CDS 45.0%
TCGGAGACAAGGTTCTTCTA+CGG + chr5_2:71438992-71439011 Msa0786050:CDS 45.0%
!!! TGTTTTGGAGGAAACTGCGA+TGG + chr5_2:71439190-71439209 Msa0786050:CDS 45.0%
!!! GTCCTGAAGTTTTGACTGGT+CGG - chr5_2:71439255-71439274 None:intergenic 45.0%
!! GTCTGTCCTGAAGTTTTGAC+TGG - chr5_2:71439259-71439278 None:intergenic 45.0%
TTAACAACCTCCTCTGCTAG+AGG - chr5_2:71439323-71439342 None:intergenic 45.0%
GTTATCTCCCCATGATCTAC+AGG - chr5_2:71439544-71439563 None:intergenic 45.0%
ACATGCTTCAGCATGTATGG+TGG + chr5_2:71439562-71439581 Msa0786050:three_prime_UTR 45.0%
!! CCAGATGCAGATTTTGGAGA+CGG + chr5_2:71439586-71439605 Msa0786050:three_prime_UTR 45.0%
ATCTGGGTAGATGTGCTTGA+TGG + chr5_2:71439619-71439638 Msa0786050:three_prime_UTR 45.0%
!!! TGCATTTTGAGGCGAGTGAT+AGG - chr5_2:71439751-71439770 None:intergenic 45.0%
! ACAAGCAGTGCTGCATTTTG+AGG - chr5_2:71439762-71439781 None:intergenic 45.0%
GAGTCACTGATGCATTGTGT+AGG + chr5_2:71439851-71439870 Msa0786050:intron 45.0%
ACTGATGCATTGTGTAGGTC+TGG + chr5_2:71439856-71439875 Msa0786050:intron 45.0%
CTGATACAATGCACATGGCA+CGG + chr5_2:71439943-71439962 Msa0786050:three_prime_UTR 45.0%
AATGCACATGGCACGGTTAT+GGG + chr5_2:71439950-71439969 Msa0786050:three_prime_UTR 45.0%
GCGACAAAAAGGTCATGTCA+AGG + chr5_2:71440021-71440040 Msa0786050:three_prime_UTR 45.0%
TCTCTGCAGATCTTCAACAG+GGG - chr5_2:71440156-71440175 None:intergenic 45.0%
CTCTCTGCAGATCTTCAACA+GGG - chr5_2:71440157-71440176 None:intergenic 45.0%
TCTCTCTGCAGATCTTCAAC+AGG - chr5_2:71440158-71440177 None:intergenic 45.0%
! GCTATCTTTTAGACATGCCG+TGG + chr5_2:71440252-71440271 Msa0786050:three_prime_UTR 45.0%
GACATGCCGTGGAAATTTGA+TGG + chr5_2:71440263-71440282 Msa0786050:three_prime_UTR 45.0%
TGAATATTGGCGCCCATTTG+GGG + chr5_2:71440325-71440344 Msa0786050:three_prime_UTR 45.0%
GGACTAGAATCTCCCCAAAT+GGG - chr5_2:71440340-71440359 None:intergenic 45.0%
TCTAGTCCGAATGGAATCTG+AGG + chr5_2:71440352-71440371 Msa0786050:three_prime_UTR 45.0%
CTAGTCCGAATGGAATCTGA+GGG + chr5_2:71440353-71440372 Msa0786050:three_prime_UTR 45.0%
GCATTCCCTCAGATTCCATT+CGG - chr5_2:71440361-71440380 None:intergenic 45.0%
CTGAGGGAATGCTAGTTGAT+CGG + chr5_2:71440369-71440388 Msa0786050:three_prime_UTR 45.0%
TGAGGGAATGCTAGTTGATC+GGG + chr5_2:71440370-71440389 Msa0786050:three_prime_UTR 45.0%
!! GTTGATCGGGAGTATCTTGA+AGG + chr5_2:71440383-71440402 Msa0786050:three_prime_UTR 45.0%
GATTCAGGAAATGGGCATGT+AGG + chr5_2:71440450-71440469 Msa0786050:three_prime_UTR 45.0%
!! CTCAGTTGGAAGTGCTAGAT+TGG - chr5_2:71440836-71440855 None:intergenic 45.0%
ACAGAAATGTACACAGCCAG+TGG + chr5_2:71440961-71440980 Msa0786050:three_prime_UTR 45.0%
AAATGTACACAGCCAGTGGT+TGG + chr5_2:71440965-71440984 Msa0786050:three_prime_UTR 45.0%
!! TGGTGATGCTTTAAAGGTCC+TGG + chr5_2:71440999-71441018 Msa0786050:three_prime_UTR 45.0%
CTCCGTTGGAAAAGCAGAAA+AGG - chr5_2:71441169-71441188 None:intergenic 45.0%
! GCTTTTCCAACGGAGAAAGA+AGG + chr5_2:71441174-71441193 Msa0786050:three_prime_UTR 45.0%
GAATTTCATTCTACCCCTGC+AGG + chr5_2:71441260-71441279 Msa0786050:three_prime_UTR 45.0%
! GGTGTCTGCCATTTGAAGTT+TGG + chr5_2:71441400-71441419 Msa0786050:intron 45.0%
TAAGTGATGGCACATGGTCT+CGG - chr5_2:71441853-71441872 None:intergenic 45.0%
CAAGGGAAGAAAGAATGGAG+TGG - chr5_2:71442428-71442447 None:intergenic 45.0%
! AAAGTGCTCTTTGGTGACTG+AGG + chr5_2:71442527-71442546 Msa0786050:intron 45.0%
! TGCCAACTGTAAGAGCATGA+TGG + chr5_2:71443175-71443194 Msa0786050:three_prime_UTR 45.0%
!!! ATGGAAGCTTTTAAAGCCGG+TGG + chr5_2:71443194-71443213 Msa0786050:three_prime_UTR 45.0%
CCTTGAATGGAAATCTCCAC+CGG - chr5_2:71443213-71443232 None:intergenic 45.0%
GTTTATCTTCACCAGGCTGA+GGG - chr5_2:71443304-71443323 None:intergenic 45.0%
!! TACCTTCAATAGAGGCACTG+GGG - chr5_2:71443327-71443346 None:intergenic 45.0%
GACTCCAGTAGGACTTTCTA+AGG + chr5_2:71443494-71443513 Msa0786050:three_prime_UTR 45.0%
! AGGACTTTCTAAGGATTGGG+GGG + chr5_2:71443503-71443522 Msa0786050:three_prime_UTR 45.0%
TGTAGACACAATGGTACTCG+CGG - chr5_2:71443724-71443743 None:intergenic 45.0%
! GTATTAGCTTGGGCCATCAA+AGG - chr5_2:71443773-71443792 None:intergenic 45.0%
CTCGTTCAATGTGACCTTTC+TGG - chr5_2:71443799-71443818 None:intergenic 45.0%
TGCTATTAATACGCCAGTGC+AGG + chr5_2:71443820-71443839 Msa0786050:three_prime_UTR 45.0%
AAAGAAGTAAGGACCTGCAC+TGG - chr5_2:71443836-71443855 None:intergenic 45.0%
CATTGACAACCACACATGCA+TGG + chr5_2:71444555-71444574 Msa0786050:intron 45.0%
AGTCATATTGGAAGGACCGA+CGG + chr5_2:71444679-71444698 Msa0786050:three_prime_UTR 45.0%
GGACATGCACTCAACAACTA+TGG - chr5_2:71444726-71444745 None:intergenic 45.0%
TGCATGTCCAAACCCTTCTA+TGG + chr5_2:71444737-71444756 Msa0786050:three_prime_UTR 45.0%
AAGCAAAAGGCGAAAACCAG+TGG + chr5_2:71445070-71445089 Msa0786050:three_prime_UTR 45.0%
!!! TTATATTTTATATTTTTTCT+TGG + chr5_2:71436421-71436440 Msa0786050:intron 5.0%
!!! TATATTTTATATTTTTTCTT+GGG + chr5_2:71436422-71436441 Msa0786050:intron 5.0%
!!! TATATAATTGTATATTTTTT+AGG + chr5_2:71437013-71437032 Msa0786050:intron 5.0%
!!! ATATAATTGTATATTTTTTA+GGG + chr5_2:71437014-71437033 Msa0786050:intron 5.0%
!! GATTAAAAAAAAAAAAAAAA+AGG - chr5_2:71440570-71440589 None:intergenic 5.0%
TGCAGAAGACGCAACAATGG+AGG + chr5_2:71437138-71437157 Msa0786050:CDS 50.0%
CGGCAGCATAAAGGGCAATA+TGG - chr5_2:71437190-71437209 None:intergenic 50.0%
GAGAGAGACGGCAGCATAAA+GGG - chr5_2:71437198-71437217 None:intergenic 50.0%
AGTGAACCTGTGGGGAGTAA+GGG - chr5_2:71437263-71437282 None:intergenic 50.0%
AGGAGAGAGAGTGAACCTGT+GGG - chr5_2:71437272-71437291 None:intergenic 50.0%
AAGGAGAGAGAGTGAACCTG+TGG - chr5_2:71437273-71437292 None:intergenic 50.0%
AACCCGTTTGCCGGAAAACT+CGG + chr5_2:71438058-71438077 Msa0786050:intron 50.0%
! TTCCCGAGTTTTCCGGCAAA+CGG - chr5_2:71438064-71438083 None:intergenic 50.0%
TTTGCCGGAAAACTCGGGAA+GGG + chr5_2:71438064-71438083 Msa0786050:intron 50.0%
! TCTACCCTTCCCGAGTTTTC+CGG - chr5_2:71438071-71438090 None:intergenic 50.0%
GAAGGCCATTGCTAGCAATC+TGG - chr5_2:71438548-71438567 None:intergenic 50.0%
GTTAGAGGAAATGACAGCGG+AGG + chr5_2:71438734-71438753 Msa0786050:CDS 50.0%
GTGGCTGTTGTGGAAAGTTC+AGG - chr5_2:71438825-71438844 None:intergenic 50.0%
AGAACCTTGTCTCCGACCAA+TGG - chr5_2:71438988-71439007 None:intergenic 50.0%
CACCGACCAGTCAAAACTTC+AGG + chr5_2:71439250-71439269 Msa0786050:CDS 50.0%
! GGTGGTCCAGATGCAGATTT+TGG + chr5_2:71439580-71439599 Msa0786050:three_prime_UTR 50.0%
CCGTCTCCAAAATCTGCATC+TGG - chr5_2:71439589-71439608 None:intergenic 50.0%
TGGGTAGATGTGCTTGATGG+TGG + chr5_2:71439622-71439641 Msa0786050:three_prime_UTR 50.0%
!! GTAGATGTGCTTGATGGTGG+AGG + chr5_2:71439625-71439644 Msa0786050:three_prime_UTR 50.0%
CAGCGATCCTTCGATCATGA+AGG + chr5_2:71439681-71439700 Msa0786050:three_prime_UTR 50.0%
CAATGCACATGGCACGGTTA+TGG + chr5_2:71439949-71439968 Msa0786050:three_prime_UTR 50.0%
CAGATCTTCAACAGGGGCAA+TGG - chr5_2:71440150-71440169 None:intergenic 50.0%
! CGGACTAGAATCTCCCCAAA+TGG - chr5_2:71440341-71440360 None:intergenic 50.0%
TGGGGAGATTCTAGTCCGAA+TGG + chr5_2:71440343-71440362 Msa0786050:three_prime_UTR 50.0%
AGGTACCACCAAAAAGCAGC+TGG - chr5_2:71440526-71440545 None:intergenic 50.0%
!! GATGCTTTAAAGGTCCTGGC+TGG + chr5_2:71441003-71441022 Msa0786050:three_prime_UTR 50.0%
CAGACGAAATGTTTCCAGCC+AGG - chr5_2:71441020-71441039 None:intergenic 50.0%
TCTCTCCCTTCTTTCTCCGT+TGG - chr5_2:71441183-71441202 None:intergenic 50.0%
AAGTGATGGCACATGGTCTC+GGG - chr5_2:71441852-71441871 None:intergenic 50.0%
AATGGTGGTAGTTGCGAACC+TGG + chr5_2:71442212-71442231 Msa0786050:intron 50.0%
GGGAAGAAAGAATGGAGTGG+AGG - chr5_2:71442425-71442444 None:intergenic 50.0%
GCGCAGCAATGAATGCTTGA+CGG - chr5_2:71443003-71443022 None:intergenic 50.0%
AAGCATTCATTGCTGCGCCT+GGG + chr5_2:71443005-71443024 Msa0786050:three_prime_UTR 50.0%
CCGGTGGAGATTTCCATTCA+AGG + chr5_2:71443210-71443229 Msa0786050:three_prime_UTR 50.0%
GGTTTATCTTCACCAGGCTG+AGG - chr5_2:71443305-71443324 None:intergenic 50.0%
ACTGGGGGTTTATCTTCACC+AGG - chr5_2:71443311-71443330 None:intergenic 50.0%
!! ACCTTCAATAGAGGCACTGG+GGG - chr5_2:71443326-71443345 None:intergenic 50.0%
GCATATGGGAAGACTCCAGT+AGG + chr5_2:71443483-71443502 Msa0786050:three_prime_UTR 50.0%
GTAGACACAATGGTACTCGC+GGG - chr5_2:71443723-71443742 None:intergenic 50.0%
TTTCGCTCGCTAAGTTGTGG+TGG - chr5_2:71444402-71444421 None:intergenic 50.0%
ATCACAAGAGGCTGCTACTC+TGG + chr5_2:71444907-71444926 Msa0786050:three_prime_UTR 50.0%
CAGTAAAAAGCCTAGGCCAC+TGG - chr5_2:71445089-71445108 None:intergenic 50.0%
CGAGAGAGACGGCAGCATAA+AGG - chr5_2:71437199-71437218 None:intergenic 55.0%
TCGTTTCCCTTACTCCCCAC+AGG + chr5_2:71437254-71437273 Msa0786050:CDS 55.0%
GAGTGAACCTGTGGGGAGTA+AGG - chr5_2:71437264-71437283 None:intergenic 55.0%
GGAGAGAGAGTGAACCTGTG+GGG - chr5_2:71437271-71437290 None:intergenic 55.0%
ACCCGTTTGCCGGAAAACTC+GGG + chr5_2:71438059-71438078 Msa0786050:intron 55.0%
! TCCCGAGTTTTCCGGCAAAC+GGG - chr5_2:71438063-71438082 None:intergenic 55.0%
GTTTGCCGGAAAACTCGGGA+AGG + chr5_2:71438063-71438082 Msa0786050:intron 55.0%
GGAAAACTCGGGAAGGGTAG+AGG + chr5_2:71438070-71438089 Msa0786050:intron 55.0%
GGAAATGACAGCGGAGGAAG+AGG + chr5_2:71438740-71438759 Msa0786050:CDS 55.0%
GCTTCCATTGGTCGGAGACA+AGG + chr5_2:71438981-71439000 Msa0786050:CDS 55.0%
AGAGAGATGAGCGCGTACCT+TGG + chr5_2:71440171-71440190 Msa0786050:three_prime_UTR 55.0%
!!! CAGTTGCGCCAGCTGCTTTT+TGG + chr5_2:71440515-71440534 Msa0786050:three_prime_UTR 55.0%
!!! TTGCGCCAGCTGCTTTTTGG+TGG + chr5_2:71440518-71440537 Msa0786050:three_prime_UTR 55.0%
ACTAACTGACGGCCAACCAC+TGG - chr5_2:71440980-71440999 None:intergenic 55.0%
! AGTGGTTGGCCGTCAGTTAG+TGG + chr5_2:71440979-71440998 Msa0786050:three_prime_UTR 55.0%
CAGGACGCTTGTCAGCTAGA+CGG + chr5_2:71442125-71442144 Msa0786050:three_prime_UTR 55.0%
AGCTAGACGGCCAAATCTGC+AGG + chr5_2:71442138-71442157 Msa0786050:three_prime_UTR 55.0%
ATGGAGTGGAGGCCCAAGAA+TGG - chr5_2:71442414-71442433 None:intergenic 55.0%
CAAGCATTCATTGCTGCGCC+TGG + chr5_2:71443004-71443023 Msa0786050:three_prime_UTR 55.0%
ACCCCCAGTGCCTCTATTGA+AGG + chr5_2:71443322-71443341 Msa0786050:three_prime_UTR 55.0%
ACACATTACTAGGGCGAGCC+CGG + chr5_2:71443741-71443760 Msa0786050:three_prime_UTR 55.0%
ATTGGAAGGACCGACGGAGT+CGG + chr5_2:71444685-71444704 Msa0786050:three_prime_UTR 55.0%
AAGGCGAAAACCAGTGGCCT+AGG + chr5_2:71445076-71445095 Msa0786050:three_prime_UTR 55.0%
GGGAGAAAGGGCGAGAGAGA+CGG - chr5_2:71437210-71437229 None:intergenic 60.0%
CTTGAGTGGCACCCTCAGCC+TGG + chr5_2:71443290-71443309 Msa0786050:three_prime_UTR 65.0%
CATTACTAGGGCGAGCCCGG+CGG + chr5_2:71443744-71443763 Msa0786050:three_prime_UTR 65.0%
AGCCCGGCGGTTCCCTTTGA+TGG + chr5_2:71443757-71443776 Msa0786050:three_prime_UTR 65.0%
GGCCATCAAAGGGAACCGCC+GGG - chr5_2:71443762-71443781 None:intergenic 65.0%
GGGCCATCAAAGGGAACCGC+CGG - chr5_2:71443763-71443782 None:intergenic 65.0%
! GCAACCTCAGCCGACTCCGT+CGG - chr5_2:71444698-71444717 None:intergenic 65.0%
AGGACCGACGGAGTCGGCTG+AGG + chr5_2:71444691-71444710 Msa0786050:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 71436247 71445378 71436247 ID=Msa0786050;Name=Msa0786050
chr5_2 mRNA 71436247 71445378 71436247 ID=Msa0786050-mRNA-1;Parent=Msa0786050;Name=Msa0786050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.83|0.76|0.84|0.91|0.76|13|2933|357
chr5_2 exon 71436247 71436275 71436247 ID=Msa0786050-mRNA-1:exon:21511;Parent=Msa0786050-mRNA-1
chr5_2 exon 71437090 71437096 71437090 ID=Msa0786050-mRNA-1:exon:21512;Parent=Msa0786050-mRNA-1
chr5_2 exon 71437109 71437275 71437109 ID=Msa0786050-mRNA-1:exon:21513;Parent=Msa0786050-mRNA-1
chr5_2 exon 71438527 71439702 71438527 ID=Msa0786050-mRNA-1:exon:21514;Parent=Msa0786050-mRNA-1
chr5_2 exon 71439873 71440552 71439873 ID=Msa0786050-mRNA-1:exon:21515;Parent=Msa0786050-mRNA-1
chr5_2 exon 71440825 71441290 71440825 ID=Msa0786050-mRNA-1:exon:21516;Parent=Msa0786050-mRNA-1
chr5_2 exon 71442073 71442159 71442073 ID=Msa0786050-mRNA-1:exon:21517;Parent=Msa0786050-mRNA-1
chr5_2 exon 71442965 71443057 71442965 ID=Msa0786050-mRNA-1:exon:21518;Parent=Msa0786050-mRNA-1
chr5_2 exon 71443149 71443343 71443149 ID=Msa0786050-mRNA-1:exon:21519;Parent=Msa0786050-mRNA-1
chr5_2 exon 71443432 71443524 71443432 ID=Msa0786050-mRNA-1:exon:21520;Parent=Msa0786050-mRNA-1
chr5_2 exon 71443629 71443841 71443629 ID=Msa0786050-mRNA-1:exon:21521;Parent=Msa0786050-mRNA-1
chr5_2 exon 71444174 71444263 71444174 ID=Msa0786050-mRNA-1:exon:21522;Parent=Msa0786050-mRNA-1
chr5_2 exon 71444668 71445378 71444668 ID=Msa0786050-mRNA-1:exon:21523;Parent=Msa0786050-mRNA-1
chr5_2 CDS 71436247 71436275 71436247 ID=Msa0786050-mRNA-1:cds;Parent=Msa0786050-mRNA-1
chr5_2 CDS 71437090 71437096 71437090 ID=Msa0786050-mRNA-1:cds;Parent=Msa0786050-mRNA-1
chr5_2 CDS 71437109 71437275 71437109 ID=Msa0786050-mRNA-1:cds;Parent=Msa0786050-mRNA-1
chr5_2 CDS 71438527 71439397 71438527 ID=Msa0786050-mRNA-1:cds;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71439398 71439702 71439398 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71439873 71440552 71439873 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71440825 71441290 71440825 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71442073 71442159 71442073 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71442965 71443057 71442965 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71443149 71443343 71443149 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71443432 71443524 71443432 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71443629 71443841 71443629 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71444174 71444263 71444174 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
chr5_2 three_prime_UTR 71444668 71445378 71444668 ID=Msa0786050-mRNA-1:three_prime_utr;Parent=Msa0786050-mRNA-1
Gene Sequence

>Msa0786050

ATGGAAGAAGAATACTCATTTGACTCCATCAGCAAGAATAGAAGAAGCGAAGAAGCCATTGAAGTTGCAGAAGACGCAACAATGGAGGCCACTACACAGTCCACTTCGTTAAGACCATATTGCCCTTTATGCTGCCGTCTCTCTCGCCCTTTCTCCCTCTCCTTATCTTCTTGCTCTTCTCTCGTTTCCCTTACTCCCCACAGAAGAAAGATCAAGGCAATCCAGATTGCTAGCAATGGCCTTCGAAATAGCAGTGCGCATAATAATTGTGTTAGAGCAGATTTATTGTGTCCAAAGTTGACATCTGTGGGGTTAAATAAACACAGTAACACTGGATACAAACATAATTTCTCATACAAGAGTCCGGTTCGCGTTACATTTATGAAGTTTTCAAATGCATCAGCTAGCATGTTAGAGGAAATGACAGCGGAGGAAGAGGTGAATTCTTCGCATTCCTCTGAAACACAAGTTAGGAAGGTGGATGTGGCTCCTTGCAATCCTGAACTTTCCACAACAGCCACTGAAAGAAAATTGGCTGGTGGTGATAATAGAGGATGGACTTTAGCAAAAAATAGGTTAGCTGAAGGTAAGAAGGAAATGAACGGCACAAACAAATACGAGAGAAAAAGTAATGGCTCTCATGTATCTAATAGATTTGCTTCCATTGGTCGGAGACAAGGTTCTTCTACGGATGTTGTTAGCAATCTTGTACAGCAAGGTCATGGTGAACATGTCTCATCTTCTGTTCAATATTCTGTATTAAACAATTCAAAGATGTTTACAGATTCTGAAACTGTGGTCCATCAGTTTAATGAATCTGCATTGGGGATCAGTGAAGAAAAAATTACTAAAGTTAATGGTGATGATGTTTTGGAGGAAACTGCGATGGACTCAACTGATGCGACGTTTGATAGAAAGGCTCGTCGCACCGACCAGTCAAAACTTCAGGACAGACTCTGTCGTATCTATGAAGATATTCTGGTGGTTGATAATATTCCTCTAGCAGAGGAGGTTGTTAAGATGATCACAGTAAAATACCGGCATCTTATTTATGCATGTGATACCGAGGTATAA
Protein sequence

>Msa0786050

MEEEYSFDSISKNRRSEEAIEVAEDATMEATTQSTSLRPYCPLCCRLSRPFSLSLSSCSSLVSLTPHRRKIKAIQIASNGLRNSSAHNNCVRADLLCPKLTSVGLNKHSNTGYKHNFSYKSPVRVTFMKFSNASASMLEEMTAEEEVNSSHSSETQVRKVDVAPCNPELSTTATERKLAGGDNRGWTLAKNRLAEGKKEMNGTNKYERKSNGSHVSNRFASIGRRQGSSTDVVSNLVQQGHGEHVSSSVQYSVLNNSKMFTDSETVVHQFNESALGISEEKITKVNGDDVLEETAMDSTDATFDRKARRTDQSKLQDRLCRIYEDILVVDNIPLAEEVVKMITVKYRHLIYACDTEV*