AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1298740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298740 MtrunA17_Chr4g0058791 96.170 235 9 0 1 235 1 235 3.54e-169 467
Msa1298740 MtrunA17_Chr4g0058811 77.510 249 53 3 1 246 1 249 8.16e-140 393
Msa1298740 MtrunA17_Chr3g0131581 34.591 159 102 2 68 225 66 223 1.76e-26 103
Msa1298740 MtrunA17_Chr8g0385691 26.866 201 145 2 26 225 4 203 2.30e-24 97.8
Msa1298740 MtrunA17_Chr8g0385681 28.750 160 112 2 67 225 48 206 9.30e-23 93.6
Msa1298740 MtrunA17_Chr3g0115591 27.160 162 116 1 72 233 52 211 1.47e-21 91.7
Msa1298740 MtrunA17_Chr5g0425421 24.375 160 119 1 72 231 49 206 1.49e-14 72.0
Msa1298740 MtrunA17_Chr1g0155071 26.415 159 108 4 75 229 49 202 8.27e-14 69.7
Msa1298740 MtrunA17_Chr1g0161441 25.773 194 134 6 51 238 12 201 1.98e-13 68.2
Msa1298740 MtrunA17_Chr7g0254621 25.000 156 115 1 75 230 50 203 2.22e-13 68.6
Msa1298740 MtrunA17_Chr8g0373391 23.636 165 117 3 75 235 49 208 7.18e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298740 AT5G63060.1 58.929 224 87 2 24 246 31 250 3.88e-93 275
Msa1298740 AT5G63060.2 60.488 205 80 1 43 246 11 215 5.55e-89 263
Msa1298740 AT1G01630.1 25.595 168 125 0 68 235 49 216 2.04e-20 87.8
Msa1298740 AT4G08690.2 26.543 162 117 1 69 230 43 202 2.34e-17 80.1
Msa1298740 AT4G08690.1 26.543 162 117 1 69 230 43 202 2.34e-17 80.1
Msa1298740 AT4G08690.3 26.543 162 117 1 69 230 43 202 2.34e-17 80.1
Msa1298740 AT1G75170.2 25.641 156 113 2 75 229 50 203 2.00e-13 68.9
Msa1298740 AT1G75170.1 25.641 156 113 2 75 229 50 203 2.00e-13 68.9
Msa1298740 AT4G36640.1 26.923 156 111 2 75 229 47 200 2.39e-13 68.6
Msa1298740 AT4G36640.3 26.923 156 111 2 75 229 47 200 2.39e-13 68.6
Msa1298740 AT1G22180.2 26.220 164 119 1 72 235 49 210 7.34e-13 67.4
Msa1298740 AT1G22180.4 26.220 164 119 1 72 235 49 210 7.34e-13 67.4
Msa1298740 AT3G22410.1 24.194 186 139 2 46 230 8 192 9.00e-12 64.7
Msa1298740 AT1G05370.1 23.913 184 139 1 46 229 19 201 1.09e-11 64.7
Msa1298740 AT1G14820.3 25.490 204 139 7 40 237 3 199 2.70e-11 62.4
Msa1298740 AT1G22180.3 26.027 146 106 1 90 235 2 145 5.07e-11 61.6
Msa1298740 AT1G22180.1 26.027 146 106 1 90 235 2 145 5.07e-11 61.6

Find 117 sgRNAs with CRISPR-Local

Find 536 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGCACTGGAATGATTTA+AGG 0.133857 8_3:+59525039 None:intergenic
CTGCTGTGTTTAAGCCATTT+TGG 0.161420 8_3:-59531817 Msa1298740:CDS
GCAGCTCCGAACTACGAATT+TGG 0.209631 8_3:+59533261 None:intergenic
TCCAGTGCAAGTACAAAATT+TGG 0.213406 8_3:-59525028 Msa1298740:three_prime_UTR
AACAGTATCTCTTGTATTAC+TGG 0.242439 8_3:-59525101 Msa1298740:three_prime_UTR
GAACCACAAACTTGGTTCTA+AGG 0.250088 8_3:+59528511 None:intergenic
TTCAATATTGCCTCTATATA+TGG 0.250371 8_3:+59525234 None:intergenic
GTCTTCCAAGCAGACGAATT+TGG 0.270138 8_3:+59525208 None:intergenic
TCTTAAATACTTAACGTTCT+TGG 0.272685 8_3:-59526802 Msa1298740:intron
TATATGGTATTACTCTTAAA+AGG 0.280208 8_3:+59525250 None:intergenic
AACTTTCAATCTCTGAAGTT+TGG 0.282042 8_3:+59525524 None:intergenic
ATATTTGATCTCAGAGGTTT+TGG 0.288687 8_3:-59526840 Msa1298740:three_prime_UTR
ATATTTGATCTGAGAGGTTT+TGG 0.291482 8_3:-59532067 Msa1298740:CDS
CTCTTTGATTCCTACATACT+AGG 0.327480 8_3:+59525327 None:intergenic
TTCTTCATAAGCCGCCAAAA+TGG 0.332829 8_3:+59531803 None:intergenic
ATGATGAAGATATGATATTA+TGG 0.341339 8_3:-59528235 Msa1298740:three_prime_UTR
AGTTTGAGAGATATCTTTGA+TGG 0.355787 8_3:+59532435 None:intergenic
GGCTTGGTAAGCTGCCAAAT+TGG 0.365127 8_3:+59526545 None:intergenic
AGTCTTCCTGTTGGTAGAAA+TGG 0.370764 8_3:-59533026 Msa1298740:CDS
GTTAAAATCATATGCTTCTC+TGG 0.375363 8_3:-59526519 Msa1298740:intron
AGAGGAATTATGCAGGAGAT+AGG 0.377590 8_3:-59525308 Msa1298740:three_prime_UTR
ATTTCTCTTGTTCGCGAGTA+TGG 0.379385 8_3:-59524969 Msa1298740:three_prime_UTR
CATAAGAAGATACAAGGAAA+TGG 0.380318 8_3:+59525350 None:intergenic
TTGAAGAACCATGCTTGTAT+AGG 0.390813 8_3:-59525377 Msa1298740:three_prime_UTR
TGGATTGCATTTGGAGTTGA+AGG 0.404989 8_3:+59528475 None:intergenic
AAGTACCTTGCGTGAGTCAT+TGG 0.409730 8_3:+59528455 None:intergenic
GTTAAAATCACATGCGTCTC+AGG 0.410481 8_3:-59531777 Msa1298740:intron
AGTCTTCCCGTTGGTAGAAA+TGG 0.413730 8_3:-59528263 Msa1298740:three_prime_UTR
TTCGAACCAAATTCGTAGTT+CGG 0.417763 8_3:-59533267 Msa1298740:CDS
AGACTGTTTAGCATTTATCT+TGG 0.418163 8_3:-59525462 Msa1298740:three_prime_UTR
TCCCTACCATTTCTACCAAC+AGG 0.432057 8_3:+59533020 None:intergenic
GCATTGAGTAAGCTTCCAAC+TGG 0.432756 8_3:-59526882 Msa1298740:three_prime_UTR
CAAAGATTAATATGTGGATC+TGG 0.433208 8_3:-59525434 Msa1298740:three_prime_UTR
GTTAAAGATGTTGCTCAAAC+CGG 0.436945 8_3:-59527342 Msa1298740:three_prime_UTR
AAAATACTTGCTCCTCATAT+CGG 0.437705 8_3:+59525167 None:intergenic
ATCCCTTAGAACCAAGTTTG+TGG 0.438222 8_3:-59528514 Msa1298740:three_prime_UTR
CAAATTGGTTTAAACACAAA+AGG 0.442517 8_3:+59526560 None:intergenic
TACAATGGCTTTAGTCAACT+TGG 0.445382 8_3:+59528172 None:intergenic
AAGAGTAATACCATATATAG+AGG 0.447537 8_3:-59525244 Msa1298740:three_prime_UTR
TGTTTATGCGATCCGATATG+AGG 0.450751 8_3:-59525179 Msa1298740:three_prime_UTR
TCCCTACCATTTCTACCAAC+GGG 0.451381 8_3:+59528257 None:intergenic
GTGAGTCATTGGATTGCATT+TGG 0.453042 8_3:+59528466 None:intergenic
AAGAACCAAATTCGTCTGCT+TGG 0.455339 8_3:-59525213 Msa1298740:three_prime_UTR
AATTCGTCTGCTTGGAAGAC+AGG 0.455469 8_3:-59525205 Msa1298740:three_prime_UTR
CTTGTATTACTGGTGCAAAA+TGG 0.459072 8_3:-59525091 Msa1298740:three_prime_UTR
ATCTAGAAAGTCATGAATAT+AGG 0.466876 8_3:+59527314 None:intergenic
ATAAGAAGATACAAGGAAAT+GGG 0.467633 8_3:+59525351 None:intergenic
ATAAAATCTCTGTATTAAGT+TGG 0.476734 8_3:-59524918 Msa1298740:three_prime_UTR
GATAGGGAAATTATATTAGT+GGG 0.481882 8_3:-59525291 Msa1298740:three_prime_UTR
AGATAGGGAAATTATATTAG+TGG 0.482836 8_3:-59525292 Msa1298740:three_prime_UTR
CACAACCTTTGATCATCTGC+AGG 0.483883 8_3:+59532151 None:intergenic
TAATACTTGCGACAATCGAT+TGG 0.487517 8_3:+59531853 None:intergenic
TAAGCTTCCCACTGGGGAAG+AGG 0.489767 8_3:-59532101 Msa1298740:CDS
GACTTTCAAAGATTAATATG+TGG 0.491544 8_3:-59525440 Msa1298740:three_prime_UTR
TTTCAATCTCTGAAGTTTGG+TGG 0.495937 8_3:+59525527 None:intergenic
ATTGTCGCAAGTATTATTTG+TGG 0.503131 8_3:-59531846 Msa1298740:CDS
CAAAATGGCTTAAACACAGC+AGG 0.505889 8_3:+59531818 None:intergenic
TGAAGAAAGACGAGGAAGAG+TGG 0.506217 8_3:+59528536 None:intergenic
GAGGAATTATGCAGGAGATA+GGG 0.510906 8_3:-59525307 Msa1298740:three_prime_UTR
AATACTTGCGACAATCGATT+GGG 0.510999 8_3:+59531854 None:intergenic
GAGCATAGATGCGGTGGGTG+TGG 0.511321 8_3:-59528627 Msa1298740:CDS
GTGAGTCGTTGGGTTGATGT+TGG 0.515876 8_3:+59533227 None:intergenic
CATAACTTCTCATCGTCCGC+AGG 0.519330 8_3:+59526924 None:intergenic
TCTTCTTATGCCTAGTATGT+AGG 0.521688 8_3:-59525337 Msa1298740:three_prime_UTR
TGAAGAAAGACGAGGAAGAG+TGG 0.522229 8_3:+59533300 None:intergenic
ACTGGGAAAGAACAGATACT+TGG 0.523097 8_3:-59526864 Msa1298740:three_prime_UTR
GTAGTTAATTCTGGAAGTGA+AGG 0.524383 8_3:-59528309 Msa1298740:intron
AGTACTTGAGACAGTCGCTT+CGG 0.526049 8_3:+59526596 None:intergenic
CTCTGCAGAGACGGTGAGGA+AGG 0.526947 8_3:-59525573 Msa1298740:three_prime_UTR
AACTACGAATTTGGTTCGAA+AGG 0.530813 8_3:+59533270 None:intergenic
AGAGCTTCGAACCACAAACT+TGG 0.531030 8_3:+59528503 None:intergenic
GCATTGAGTAAGCTTCCCAC+TGG 0.533695 8_3:-59532109 Msa1298740:CDS
GCTGCGACCACCACAAGCAC+AGG 0.533870 8_3:+59527279 None:intergenic
TCAACCCAACGACTCACAAA+AGG 0.535429 8_3:-59533221 Msa1298740:intron
AAGACTGAATTGAATGGCGC+TGG 0.535827 8_3:-59528580 Msa1298740:exon
GAAGAGAAGACTGAATTGAA+TGG 0.536940 8_3:-59528586 Msa1298740:exon
AGACGAGGAAGAGTGGTGGT+TGG 0.537822 8_3:+59533307 None:intergenic
AACCACAAACTTGGTTCTAA+GGG 0.538296 8_3:+59528512 None:intergenic
AGTATCTGTTCTTTCCCAGT+TGG 0.541349 8_3:+59526867 None:intergenic
TCCTGTTGGTAGAAATGGTA+GGG 0.541806 8_3:-59533021 Msa1298740:CDS
ATCCCTACCATTTCTACCAA+CGG 0.547504 8_3:+59528256 None:intergenic
CATTGAGTAAGCTTCCCACT+GGG 0.565906 8_3:-59532108 Msa1298740:CDS
ACTGTCTCAAGTACTATTTG+TGG 0.570730 8_3:-59526588 Msa1298740:three_prime_UTR
AGTATTTCCTCTTCCCCAGT+GGG 0.572654 8_3:+59532094 None:intergenic
TCCCGTTGGTAGAAATGGTA+GGG 0.573606 8_3:-59528258 Msa1298740:three_prime_UTR
GATGCTACCACCACAAGCAC+AGG 0.574890 8_3:+59532370 None:intergenic
TGGCTGTTACTATGATTCAG+AGG 0.584726 8_3:-59525008 Msa1298740:three_prime_UTR
GAATCAAAGAGGAATTATGC+AGG 0.588526 8_3:-59525315 Msa1298740:three_prime_UTR
AGGACCCTGCAGATGATCAA+AGG 0.591099 8_3:-59532156 Msa1298740:CDS
ACTAGGCATAAGAAGATACA+AGG 0.594414 8_3:+59525344 None:intergenic
CTTGGAATATTTGATCTCAG+AGG 0.594486 8_3:-59526846 Msa1298740:three_prime_UTR
TTCCCGTTGGTAGAAATGGT+AGG 0.597951 8_3:-59528259 Msa1298740:three_prime_UTR
CTTGCAATATTTGATCTGAG+AGG 0.598562 8_3:-59532073 Msa1298740:CDS
TAGTTCTGGAAGTGAAAGAG+AGG 0.601503 8_3:-59533067 Msa1298740:CDS
CTATGATTCAGAGGAGTACA+CGG 0.607451 8_3:-59524999 Msa1298740:three_prime_UTR
AGAAAGACGAGGAAGAGTGG+TGG 0.617480 8_3:+59533303 None:intergenic
ATAACTTCTCATCGTCCGCA+GGG 0.626723 8_3:+59526925 None:intergenic
GAACACTATAGTCTTCCTGT+TGG 0.630578 8_3:-59533035 Msa1298740:CDS
CATTGAGTAAGCTTCCAACT+GGG 0.632302 8_3:-59526881 Msa1298740:three_prime_UTR
CAATGACAGACCTGTGCTTG+TGG 0.634407 8_3:-59527289 Msa1298740:three_prime_UTR
AAGTATTTCCTCTTCCCCAG+TGG 0.636610 8_3:+59532093 None:intergenic
GAATACTATAGTCTTCCCGT+TGG 0.641212 8_3:-59528272 Msa1298740:three_prime_UTR
TTCCTGTTGGTAGAAATGGT+AGG 0.641255 8_3:-59533022 Msa1298740:CDS
CAACAACAGACCTGTGCTTG+TGG 0.643089 8_3:-59532380 Msa1298740:CDS
TTTGCTCTGCAGAGACGGTG+AGG 0.644052 8_3:-59525577 Msa1298740:three_prime_UTR
ATGGGATGCCTATACAAGCA+TGG 0.645803 8_3:+59525369 None:intergenic
CTAGTATGTAGGAATCAAAG+AGG 0.658964 8_3:-59525326 Msa1298740:three_prime_UTR
GCAATCCAATGACTCACGCA+AGG 0.664895 8_3:-59528460 Msa1298740:intron
ATGACGAAGATATGATACAA+TGG 0.666407 8_3:-59532998 Msa1298740:CDS
TGACAGACCTGTGCTTGTGG+TGG 0.674493 8_3:-59527286 Msa1298740:three_prime_UTR
ACAACCTTTGATCATCTGCA+GGG 0.675302 8_3:+59532152 None:intergenic
GAAATTGTTGAAGAAAGACG+AGG 0.676515 8_3:+59533292 None:intergenic
AGAAAGACGAGGAAGAGTGG+TGG 0.678032 8_3:+59528539 None:intergenic
GTCACAGGCACAGGACCCTG+CGG 0.691722 8_3:-59526940 Msa1298740:intron
CTAAGGGATGAAGAAAGACG+AGG 0.703850 8_3:+59528528 None:intergenic
CAACAGACCTGTGCTTGTGG+TGG 0.714957 8_3:-59532377 Msa1298740:CDS
ATTGAGTAAGCTTCCCACTG+GGG 0.730583 8_3:-59532107 Msa1298740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTAATATTTCTTTATTTT+TGG - chr8_3:59526334-59526353 Msa1298740:intron 10.0%
!!! GTTTATTGATTTTTTTTTTT+TGG - chr8_3:59527096-59527115 Msa1298740:intron 10.0%
!! ATGAAAAATTTATTAGATAA+AGG + chr8_3:59528397-59528416 None:intergenic 10.0%
!!! AAATTTTTCATATTTTTGTT+TGG - chr8_3:59528406-59528425 Msa1298740:intron 10.0%
!! TTATAAATTAAAGTAAAATG+TGG - chr8_3:59529304-59529323 Msa1298740:intron 10.0%
!! TAATAAAAATCAATATTAAC+AGG + chr8_3:59530723-59530742 None:intergenic 10.0%
!! ATAAAATTTATAAACATAGA+GGG + chr8_3:59530800-59530819 None:intergenic 10.0%
!! GATATAAAGTAATTATAAAA+GGG + chr8_3:59531043-59531062 None:intergenic 10.0%
!! TGATATAAAGTAATTATAAA+AGG + chr8_3:59531044-59531063 None:intergenic 10.0%
!! ACCAATATAAATATAAATTT+GGG + chr8_3:59532449-59532468 None:intergenic 10.0%
!! AAATTTATATTTATATTGGT+GGG - chr8_3:59532449-59532468 Msa1298740:CDS 10.0%
!!! GTAAGTTGAATAATTTTTAT+TGG + chr8_3:59525088-59525107 None:intergenic 15.0%
!! ATATAAATATGATGAAAAGA+AGG + chr8_3:59525330-59525349 None:intergenic 15.0%
!!! AATTTATTAGATAAAGGTTT+TGG + chr8_3:59528391-59528410 None:intergenic 15.0%
!!! AAGGAATAAATTTTAACATA+TGG - chr8_3:59528442-59528461 Msa1298740:intron 15.0%
!!! AGGAATAAATTTTAACATAT+GGG - chr8_3:59528443-59528462 Msa1298740:intron 15.0%
!! AATCACTTATTTCAATAAAT+GGG + chr8_3:59528595-59528614 None:intergenic 15.0%
!! AAATCACTTATTTCAATAAA+TGG + chr8_3:59528596-59528615 None:intergenic 15.0%
!!! AAGAATAAATTTTAACTTTG+TGG - chr8_3:59529001-59529020 Msa1298740:intron 15.0%
!! AGCATTTAAAAATTAAAAGA+AGG - chr8_3:59529482-59529501 Msa1298740:intron 15.0%
!!! TAAGTTGAATAATTGTTATT+GGG + chr8_3:59529838-59529857 None:intergenic 15.0%
!! ATGAACATAAATTTATAAGT+GGG - chr8_3:59530505-59530524 Msa1298740:intron 15.0%
!! CATAAAATTTATAAACATAG+AGG + chr8_3:59530801-59530820 None:intergenic 15.0%
!! TTATAATTAATAATTTCTCC+TGG - chr8_3:59531184-59531203 Msa1298740:intron 15.0%
!! TATAATTAATAATTTCTCCT+GGG - chr8_3:59531185-59531204 Msa1298740:intron 15.0%
!! TATTAGTATATATTATGCTA+AGG - chr8_3:59532366-59532385 Msa1298740:CDS 15.0%
!! ATTAGTATATATTATGCTAA+GGG - chr8_3:59532367-59532386 Msa1298740:CDS 15.0%
!! TCCCAAATTTATATTTATAT+TGG - chr8_3:59532445-59532464 Msa1298740:CDS 15.0%
!! CACCAATATAAATATAAATT+TGG + chr8_3:59532450-59532469 None:intergenic 15.0%
!! CAAATTTATATTTATATTGG+TGG - chr8_3:59532448-59532467 Msa1298740:CDS 15.0%
!! AATTTATATTTATATTGGTG+GGG - chr8_3:59532450-59532469 Msa1298740:CDS 15.0%
!! TAAATATGATCAAATGTTTC+CGG + chr8_3:59525531-59525550 None:intergenic 20.0%
!! AATAATATGATAACCTACAA+GGG + chr8_3:59525611-59525630 None:intergenic 20.0%
!! ACATTCTACTTTATTAGAAA+TGG - chr8_3:59525743-59525762 Msa1298740:intron 20.0%
!!! AATTTAAAATCAGCATTTTC+CGG + chr8_3:59526198-59526217 None:intergenic 20.0%
!!! AAATGCTGATTTTAAATTCT+TGG - chr8_3:59526200-59526219 Msa1298740:intron 20.0%
!!! TTTTATTTCAAGCAATATCA+GGG + chr8_3:59526291-59526310 None:intergenic 20.0%
!! AAAACTTAAAGAAACTCTTA+GGG + chr8_3:59527325-59527344 None:intergenic 20.0%
!! TAAAACTTAAAGAAACTCTT+AGG + chr8_3:59527326-59527345 None:intergenic 20.0%
!!! TTCATATTTTTGTTTGGTAT+CGG - chr8_3:59528412-59528431 Msa1298740:intron 20.0%
!! GATGAATAAGAATAAAACTA+GGG + chr8_3:59528504-59528523 None:intergenic 20.0%
!! TATTTCAATAAATGGGAAAA+AGG + chr8_3:59528588-59528607 None:intergenic 20.0%
!!! CAAATTTGCTAAAAACAAAA+AGG + chr8_3:59528916-59528935 None:intergenic 20.0%
!!! ACATGACATTTTTACTAAAA+TGG - chr8_3:59529250-59529269 Msa1298740:intron 20.0%
!! TGCATAGTAAGTAATAATTA+AGG - chr8_3:59529343-59529362 Msa1298740:intron 20.0%
!! GCATAGTAAGTAATAATTAA+GGG - chr8_3:59529344-59529363 Msa1298740:intron 20.0%
!! CATAGTAAGTAATAATTAAG+GGG - chr8_3:59529345-59529364 Msa1298740:intron 20.0%
!!! TAGTTTAAAACCTTTTTTAG+AGG + chr8_3:59529559-59529578 None:intergenic 20.0%
!!! AAATCCAAATGATGATTTTA+AGG + chr8_3:59529589-59529608 None:intergenic 20.0%
!!! TAAAATCATCATTTGGATTT+TGG - chr8_3:59529589-59529608 Msa1298740:intron 20.0%
!!! GTAAGTTGAATAATTGTTAT+TGG + chr8_3:59529839-59529858 None:intergenic 20.0%
!!! TGATATTTTGTAGTTAATTC+TGG - chr8_3:59529920-59529939 Msa1298740:intron 20.0%
!! ATGATGAAGATATGATATTA+TGG - chr8_3:59530003-59530022 Msa1298740:intron 20.0%
!! TAAATATACATCTATAAGTG+AGG - chr8_3:59530308-59530327 Msa1298740:intron 20.0%
!! AAATATACATCTATAAGTGA+GGG - chr8_3:59530309-59530328 Msa1298740:intron 20.0%
!! CATGAACATAAATTTATAAG+TGG - chr8_3:59530504-59530523 Msa1298740:intron 20.0%
!! TGAACATAAATTTATAAGTG+GGG - chr8_3:59530506-59530525 Msa1298740:intron 20.0%
!!! ATCTTATAAGTTGGTATTAT+AGG - chr8_3:59530538-59530557 Msa1298740:intron 20.0%
!!! TCTTATAAGTTGGTATTATA+GGG - chr8_3:59530539-59530558 Msa1298740:intron 20.0%
!! GGAGACAAATATTAAAATTT+GGG + chr8_3:59530580-59530599 None:intergenic 20.0%
!! TGGAGACAAATATTAAAATT+TGG + chr8_3:59530581-59530600 None:intergenic 20.0%
!! AATCAAAGAGAATATAAATG+TGG - chr8_3:59531088-59531107 Msa1298740:intron 20.0%
!!! CAAATTTTTCAATTTTATGC+AGG - chr8_3:59531153-59531172 Msa1298740:intron 20.0%
!! TGTCATAGATCTTAAATTTA+AGG - chr8_3:59531242-59531261 Msa1298740:intron 20.0%
!! GTCATAGATCTTAAATTTAA+GGG - chr8_3:59531243-59531262 Msa1298740:intron 20.0%
!!! GAGTTCTAACTATAAATATT+TGG + chr8_3:59531481-59531500 None:intergenic 20.0%
!!! TTTTCTATATAAGAGAAAAC+AGG - chr8_3:59531770-59531789 Msa1298740:intron 20.0%
!! ATTTATATTTATATTGGTGG+GGG - chr8_3:59532451-59532470 Msa1298740:CDS 20.0%
!! CCTGTAAAAGAAAATAAAAA+TGG + chr8_3:59532635-59532654 None:intergenic 20.0%
!!! CCATTTTTATTTTCTTTTAC+AGG - chr8_3:59532632-59532651 Msa1298740:intron 20.0%
!! TATATGGTATTACTCTTAAA+AGG + chr8_3:59526982-59527001 None:intergenic 20.0%
!!! TTTCAGTTTATTGCTTTTTT+AGG - chr8_3:59533091-59533110 Msa1298740:intron 20.0%
!!! TTCAGTTTATTGCTTTTTTA+GGG - chr8_3:59533092-59533111 Msa1298740:intron 20.0%
!!! ACAGAGATTTTATATTTTGA+TGG + chr8_3:59533313-59533332 None:intergenic 20.0%
!! ATAAAATCTCTGTATTAAGT+TGG - chr8_3:59533320-59533339 Msa1298740:CDS 20.0%
! CAATAATATGATAACCTACA+AGG + chr8_3:59525612-59525631 None:intergenic 25.0%
! ATAAAATTTGCAAACATGGA+GGG + chr8_3:59525706-59525725 None:intergenic 25.0%
! GTACATAAAATTTGCAAACA+TGG + chr8_3:59525710-59525729 None:intergenic 25.0%
! ACAAAATCTACACTTACTTT+AGG + chr8_3:59525904-59525923 None:intergenic 25.0%
! AAGATATTAAGTCTTTCAGT+TGG - chr8_3:59525968-59525987 Msa1298740:intron 25.0%
! TATATTCATCCTGATTGTAA+TGG + chr8_3:59526048-59526067 None:intergenic 25.0%
!! TTTTAAATTCTTGGCATTCT+TGG - chr8_3:59526209-59526228 Msa1298740:intron 25.0%
!!! CTTTTATTTCAAGCAATATC+AGG + chr8_3:59526292-59526311 None:intergenic 25.0%
! ATACTATAAACAGACAATAC+TGG + chr8_3:59526532-59526551 None:intergenic 25.0%
! GTATGAATCATAAAAATGTC+AGG + chr8_3:59526669-59526688 None:intergenic 25.0%
!! ATTCTCATCACATTTTGAAT+CGG - chr8_3:59526698-59526717 Msa1298740:intron 25.0%
! CCTGTAAAAGAAAATGAAAA+TGG + chr8_3:59526781-59526800 None:intergenic 25.0%
!! CCATTTTCATTTTCTTTTAC+AGG - chr8_3:59526778-59526797 Msa1298740:intron 25.0%
!!! CAGAGATTGAAAGTTATTTT+TGG - chr8_3:59526865-59526884 Msa1298740:three_prime_UTR 25.0%
! AGATAAGGGAATCATATTAT+TGG - chr8_3:59526937-59526956 Msa1298740:intron 25.0%
! GATAAGGGAATCATATTATT+GGG - chr8_3:59526938-59526957 Msa1298740:intron 25.0%
! TTAAGAGTAATACCATATAG+AGG - chr8_3:59526983-59527002 Msa1298740:intron 25.0%
! AAACTTAAAGAAACTCTTAG+GGG + chr8_3:59527324-59527343 None:intergenic 25.0%
! GTTCTGATTCAAAGAAAATA+TGG - chr8_3:59527763-59527782 Msa1298740:intron 25.0%
! AGTAATTGACCAATTCTATA+AGG + chr8_3:59527842-59527861 None:intergenic 25.0%
! AATTGGTCAATTACTTGATA+AGG - chr8_3:59527847-59527866 Msa1298740:intron 25.0%
! ATTGGTCAATTACTTGATAA+GGG - chr8_3:59527848-59527867 Msa1298740:intron 25.0%
! CAAAGTATACTTCATTACAT+GGG + chr8_3:59528028-59528047 None:intergenic 25.0%
! TCAAAGTATACTTCATTACA+TGG + chr8_3:59528029-59528048 None:intergenic 25.0%
! TGTAATGAAGTATACTTTGA+TGG - chr8_3:59528029-59528048 Msa1298740:intron 25.0%
!!! ATTTTTTGTAGATACTGAAC+AGG - chr8_3:59528070-59528089 Msa1298740:intron 25.0%
! TCAATTGAGAAAATCAAACA+TGG - chr8_3:59528155-59528174 Msa1298740:intron 25.0%
! CAATTGAGAAAATCAAACAT+GGG - chr8_3:59528156-59528175 Msa1298740:intron 25.0%
! TCTATTTCAATTGCACATAA+AGG - chr8_3:59528311-59528330 Msa1298740:intron 25.0%
!!! TCATATTTTTGTTTGGTATC+GGG - chr8_3:59528413-59528432 Msa1298740:intron 25.0%
!! TAAGAATAAAACTAGGGTTT+TGG + chr8_3:59528498-59528517 None:intergenic 25.0%
! GGATGAATAAGAATAAAACT+AGG + chr8_3:59528505-59528524 None:intergenic 25.0%
! TATGACTATATTCAAATCTC+CGG + chr8_3:59528824-59528843 None:intergenic 25.0%
! TTGAATATAGTCATATGTGT+AGG - chr8_3:59528829-59528848 Msa1298740:intron 25.0%
! ATCCATGTTAATAGCATAAA+CGG + chr8_3:59528868-59528887 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + chr8_3:59529192-59529211 None:intergenic 25.0%
! TAAAGTAAAATGTGGTACTT+TGG - chr8_3:59529312-59529331 Msa1298740:intron 25.0%
!!! TTTTGATGTACCTCTAAAAA+AGG - chr8_3:59529546-59529565 Msa1298740:intron 25.0%
!! GAATAATTGTTATTGGGATA+TGG + chr8_3:59529832-59529851 None:intergenic 25.0%
! AAACTCTCTTAACATCTAAA+AGG - chr8_3:59529865-59529884 Msa1298740:intron 25.0%
! AACTCTCTTAACATCTAAAA+GGG - chr8_3:59529866-59529885 Msa1298740:intron 25.0%
! CTATAATTATGATGAGAAGA+AGG + chr8_3:59530093-59530112 None:intergenic 25.0%
!! ATTTAGAGTTTGCTTTATTG+AGG - chr8_3:59530143-59530162 Msa1298740:intron 25.0%
!! ACCATGATAAAATTTGAGTT+GGG + chr8_3:59530377-59530396 None:intergenic 25.0%
! TACCATGATAAAATTTGAGT+TGG + chr8_3:59530378-59530397 None:intergenic 25.0%
! AAAGATTATTCAAGATCCAT+TGG - chr8_3:59530400-59530419 Msa1298740:intron 25.0%
! AAGATTATTCAAGATCCATT+GGG - chr8_3:59530401-59530420 Msa1298740:intron 25.0%
! GAACATAAATTTATAAGTGG+GGG - chr8_3:59530507-59530526 Msa1298740:intron 25.0%
! TAATACCAACTTATAAGATG+AGG + chr8_3:59530537-59530556 None:intergenic 25.0%
! ATGAAAGTAATCAAATGTGT+CGG + chr8_3:59530624-59530643 None:intergenic 25.0%
! CCATTTCTAATAATGTAGAA+GGG + chr8_3:59530837-59530856 None:intergenic 25.0%
! ATCTAGAAAGTCATGAATAT+AGG + chr8_3:59530927-59530946 None:intergenic 25.0%
! CACATAAATAATTATGTCAC+AGG - chr8_3:59531283-59531302 Msa1298740:intron 25.0%
!! ATGTGTTTTCTTAATTGAGA+AGG - chr8_3:59531334-59531353 Msa1298740:intron 25.0%
! TCTTAAATACTTAACGTTCT+TGG - chr8_3:59531436-59531455 Msa1298740:intron 25.0%
! TATTTATAGTTAGAACTCCA+CGG - chr8_3:59531483-59531502 Msa1298740:intron 25.0%
! TCTAACATGTTTCTTTACTT+TGG - chr8_3:59531591-59531610 Msa1298740:intron 25.0%
! CTAACATGTTTCTTTACTTT+GGG - chr8_3:59531592-59531611 Msa1298740:intron 25.0%
!! CAAATTGGTTTAAACACAAA+AGG + chr8_3:59531681-59531700 None:intergenic 25.0%
!! CTTTTGTGTTTAAACCAATT+TGG - chr8_3:59531679-59531698 Msa1298740:intron 25.0%
!!! GAAGCATATGATTTTAACAT+CGG + chr8_3:59531717-59531736 None:intergenic 25.0%
! AAAGTCAAACATAACAAGTA+GGG + chr8_3:59531879-59531898 None:intergenic 25.0%
! AAAAGTCAAACATAACAAGT+AGG + chr8_3:59531880-59531899 None:intergenic 25.0%
! TTGTTTGATGAAGTTATTCA+TGG - chr8_3:59531961-59531980 Msa1298740:intron 25.0%
! TTTATATTTATATTGGTGGG+GGG - chr8_3:59532452-59532471 Msa1298740:CDS 25.0%
! AAAAAGATTGGAGTGATATA+AGG + chr8_3:59532491-59532510 None:intergenic 25.0%
!!! CAGAGATTGAAAGTTATTTT+TGG - chr8_3:59526865-59526884 Msa1298740:three_prime_UTR 25.0%
! GACTTTCAAAGATTAATATG+TGG - chr8_3:59532798-59532817 Msa1298740:intron 25.0%
! ATAAGAAGATACAAGGAAAT+GGG + chr8_3:59532890-59532909 None:intergenic 25.0%
! AGATAGGGAAATTATATTAG+TGG - chr8_3:59532946-59532965 Msa1298740:CDS 25.0%
! GATAGGGAAATTATATTAGT+GGG - chr8_3:59532947-59532966 Msa1298740:CDS 25.0%
! AAGAGTAATACCATATATAG+AGG - chr8_3:59532994-59533013 Msa1298740:CDS 25.0%
! TTCAATATTGCCTCTATATA+TGG + chr8_3:59533007-59533026 None:intergenic 25.0%
! GAAAATTTTGCAGTTAGTTC+TGG - chr8_3:59525157-59525176 Msa1298740:three_prime_UTR 30.0%
ATGACGAAGATATGATACAA+TGG - chr8_3:59525240-59525259 Msa1298740:three_prime_UTR 30.0%
TGATGAAAAGAAGGATACAA+TGG + chr8_3:59525321-59525340 None:intergenic 30.0%
CTTTGTTGAGAAAATGAAAC+CGG - chr8_3:59525377-59525396 Msa1298740:three_prime_UTR 30.0%
! GAAAATTAGAGCTCATTTTC+CGG + chr8_3:59525399-59525418 None:intergenic 30.0%
CATAAAATTTGCAAACATGG+AGG + chr8_3:59525707-59525726 None:intergenic 30.0%
AGTTTGAGAGATATCTTTGA+TGG + chr8_3:59525806-59525825 None:intergenic 30.0%
! GTGTGTTTTCTTAATTGAGA+AGG - chr8_3:59526107-59526126 Msa1298740:intron 30.0%
! ATATTTGATCTGAGAGGTTT+TGG - chr8_3:59526171-59526190 Msa1298740:intron 30.0%
ATTGTCGCAAGTATTATTTG+TGG - chr8_3:59526392-59526411 Msa1298740:intron 30.0%
TGTCTGTTTATAGTATGCTA+AGG - chr8_3:59526536-59526555 Msa1298740:three_prime_UTR 30.0%
GTCTGTTTATAGTATGCTAA+GGG - chr8_3:59526537-59526556 Msa1298740:three_prime_UTR 30.0%
CACCAATGTAACACATTAAT+CGG + chr8_3:59526633-59526652 None:intergenic 30.0%
GATTAATGTGTTACATTGGT+GGG - chr8_3:59526632-59526651 Msa1298740:intron 30.0%
ATGTGATGAGAATGTTATAG+AGG + chr8_3:59526691-59526710 None:intergenic 30.0%
! TTCTCATCACATTTTGAATC+GGG - chr8_3:59526699-59526718 Msa1298740:intron 30.0%
CAAAAATCAAACGATCATGT+AGG - chr8_3:59526724-59526743 Msa1298740:intron 30.0%
!! AACTTTCAATCTCTGAAGTT+TGG + chr8_3:59526860-59526879 None:intergenic 30.0%
TATGAAAATTGCTGTCATTG+AGG - chr8_3:59526892-59526911 Msa1298740:three_prime_UTR 30.0%
ATACCATATAGAGGCAATAT+TGG - chr8_3:59526992-59527011 Msa1298740:intron 30.0%
AAATACCTCTTGTATAAGTG+TGG - chr8_3:59527143-59527162 Msa1298740:intron 30.0%
TGTATAAGTGTGGTACAAAA+TGG - chr8_3:59527153-59527172 Msa1298740:intron 30.0%
GTTATACATTGAATACACAC+TGG + chr8_3:59527204-59527223 None:intergenic 30.0%
AACAGTGATATCAGAGTTAT+TGG - chr8_3:59527417-59527436 Msa1298740:intron 30.0%
!! TCAGAAGTATTGTTTGTTCT+TGG - chr8_3:59527804-59527823 Msa1298740:intron 30.0%
!! CAGAAGTATTGTTTGTTCTT+GGG - chr8_3:59527805-59527824 Msa1298740:intron 30.0%
AAACAACTCAAAGTGTATGA+TGG - chr8_3:59527893-59527912 Msa1298740:intron 30.0%
ACCTATGCCAATAAGAAATT+AGG - chr8_3:59527940-59527959 Msa1298740:intron 30.0%
CCTATGCCAATAAGAAATTA+GGG - chr8_3:59527941-59527960 Msa1298740:intron 30.0%
ATAGCTCCCTAATTTCTTAT+TGG + chr8_3:59527950-59527969 None:intergenic 30.0%
TTAAGTCTTGCCTTGTATTT+GGG + chr8_3:59528265-59528284 None:intergenic 30.0%
TTTAAGTCTTGCCTTGTATT+TGG + chr8_3:59528266-59528285 None:intergenic 30.0%
AATACAAGGCAAGACTTAAA+AGG - chr8_3:59528266-59528285 Msa1298740:three_prime_UTR 30.0%
CAAGACTTAAAAGGTCATAT+CGG - chr8_3:59528275-59528294 Msa1298740:three_prime_UTR 30.0%
AAAAAGGAAAACGAGTTAGA+GGG + chr8_3:59528572-59528591 None:intergenic 30.0%
! AACTTTGTGGTAAGTCTTAT+TGG - chr8_3:59529014-59529033 Msa1298740:intron 30.0%
TTAACTGTTCTCAGGAAAAA+TGG + chr8_3:59529103-59529122 None:intergenic 30.0%
!! TAATAATTAAGGGGTACTGT+TGG - chr8_3:59529354-59529373 Msa1298740:intron 30.0%
!! AATAATTAAGGGGTACTGTT+GGG - chr8_3:59529355-59529374 Msa1298740:intron 30.0%
AATAGTGCATTGAAAACTGA+AGG - chr8_3:59529389-59529408 Msa1298740:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8_3:59529444-59529463 Msa1298740:intron 30.0%
ACGACCTTAAAATCATCATT+TGG - chr8_3:59529582-59529601 Msa1298740:intron 30.0%
AGACACTTAACAACAAACAT+TGG + chr8_3:59530267-59530286 None:intergenic 30.0%
CTAACTCAACCAAACAATAT+CGG + chr8_3:59530353-59530372 None:intergenic 30.0%
! ACCCAACTCAAATTTTATCA+TGG - chr8_3:59530373-59530392 Msa1298740:intron 30.0%
TATAACCGATCTCTATGTAT+CGG - chr8_3:59530651-59530670 Msa1298740:intron 30.0%
ATTTATAAACATAGAGGGTC+TGG + chr8_3:59530795-59530814 None:intergenic 30.0%
CCCTTCTACATTATTAGAAA+TGG - chr8_3:59530834-59530853 Msa1298740:intron 30.0%
GCCATTTCTAATAATGTAGA+AGG + chr8_3:59530838-59530857 None:intergenic 30.0%
TTTCCTAAAGTAAGTGTAGA+AGG - chr8_3:59525898-59525917 Msa1298740:intron 30.0%
TAACCTTCTACACTTACTTT+AGG + chr8_3:59530995-59531014 None:intergenic 30.0%
ATGAAACCAAAACTTTCTCT+AGG - chr8_3:59531119-59531138 Msa1298740:intron 30.0%
! ATATTTGATCTCAGAGGTTT+TGG - chr8_3:59531398-59531417 Msa1298740:intron 30.0%
TCATGAACACAAATCAAGTT+AGG + chr8_3:59531517-59531536 None:intergenic 30.0%
ATTACCTTGCTGGAAATAAA+TGG - chr8_3:59531542-59531561 Msa1298740:intron 30.0%
!! ATATGATTTTAACATCGGCT+TGG + chr8_3:59531712-59531731 None:intergenic 30.0%
GTTAAAATCATATGCTTCTC+TGG - chr8_3:59531719-59531738 Msa1298740:intron 30.0%
! GACTTTTGCGTTTTTAATCA+TGG - chr8_3:59531893-59531912 Msa1298740:intron 30.0%
CAAGTATACTCAAGATATTG+AGG - chr8_3:59531921-59531940 Msa1298740:intron 30.0%
AGATATTGAGGTTGTTAAGA+TGG - chr8_3:59531933-59531952 Msa1298740:intron 30.0%
AGTATATATTATGCTAAGGG+TGG - chr8_3:59532370-59532389 Msa1298740:CDS 30.0%
GTATATATTATGCTAAGGGT+GGG - chr8_3:59532371-59532390 Msa1298740:CDS 30.0%
TATATATTATGCTAAGGGTG+GGG - chr8_3:59532372-59532391 Msa1298740:CDS 30.0%
GGGATATAAAGTTAACTTAG+TGG + chr8_3:59532429-59532448 None:intergenic 30.0%
! TCACCTTATAACTCCTATTT+TGG - chr8_3:59532533-59532552 Msa1298740:intron 30.0%
ATGCCAAAATAGGAGTTATA+AGG + chr8_3:59532539-59532558 None:intergenic 30.0%
CAACAATCTTATGCCAAAAT+AGG + chr8_3:59532549-59532568 None:intergenic 30.0%
!!! CTATTTTGGCATAAGATTGT+TGG - chr8_3:59532547-59532566 Msa1298740:intron 30.0%
!! AACTTTCAATCTCTGAAGTT+TGG + chr8_3:59526860-59526879 None:intergenic 30.0%
AGACTGTTTAGCATTTATCT+TGG - chr8_3:59532776-59532795 Msa1298740:intron 30.0%
CAAAGATTAATATGTGGATC+TGG - chr8_3:59532804-59532823 Msa1298740:intron 30.0%
! CAACTCATAAGAATTTTGAG+AGG - chr8_3:59532833-59532852 Msa1298740:intron 30.0%
CATAAGAAGATACAAGGAAA+TGG + chr8_3:59532891-59532910 None:intergenic 30.0%
AAAATACTTGCTCCTCATAT+CGG + chr8_3:59533074-59533093 None:intergenic 30.0%
AACAGTATCTCTTGTATTAC+TGG - chr8_3:59533137-59533156 Msa1298740:intron 30.0%
GAAATTGTTGAAGAAAGACG+AGG + chr8_3:59524949-59524968 None:intergenic 35.0%
! AACTACGAATTTGGTTCGAA+AGG + chr8_3:59524971-59524990 None:intergenic 35.0%
TTCGAACCAAATTCGTAGTT+CGG - chr8_3:59524971-59524990 Msa1298740:three_prime_UTR 35.0%
TTGCTTAAGTAGGTGATAAC+TGG + chr8_3:59525678-59525697 None:intergenic 35.0%
TGAACATGTCCATTACAATC+AGG - chr8_3:59526036-59526055 Msa1298740:intron 35.0%
AGGATGAATATATATGCCAC+AGG - chr8_3:59526056-59526075 Msa1298740:intron 35.0%
AATATATATGCCACAGGAAC+AGG - chr8_3:59526062-59526081 Msa1298740:intron 35.0%
CTTGCAATATTTGATCTGAG+AGG - chr8_3:59526165-59526184 Msa1298740:intron 35.0%
AATACTTGCGACAATCGATT+GGG + chr8_3:59526387-59526406 None:intergenic 35.0%
TAATACTTGCGACAATCGAT+TGG + chr8_3:59526388-59526407 None:intergenic 35.0%
TGTTTATAGTATGCTAAGGG+TGG - chr8_3:59526540-59526559 Msa1298740:three_prime_UTR 35.0%
GTGAAGTAATAAAGAGATCG+AGG + chr8_3:59526575-59526594 None:intergenic 35.0%
CTCCGATTAATGTGTTACAT+TGG - chr8_3:59526628-59526647 Msa1298740:intron 35.0%
CGATTAATGTGTTACATTGG+TGG - chr8_3:59526631-59526650 Msa1298740:intron 35.0%
!! TTTCAATCTCTGAAGTTTGG+TGG + chr8_3:59526857-59526876 None:intergenic 35.0%
GAGGAATCAAAGAAGAACTA+TGG - chr8_3:59526911-59526930 Msa1298740:three_prime_UTR 35.0%
GAATCAAAGAAGAACTATGG+TGG - chr8_3:59526914-59526933 Msa1298740:three_prime_UTR 35.0%
! AAGAACTATGGTGGAGATAA+GGG - chr8_3:59526923-59526942 Msa1298740:three_prime_UTR 35.0%
TCTCCAATATTGCCTCTATA+TGG + chr8_3:59526998-59527017 None:intergenic 35.0%
TGTTTATGCGATCTAGTCTA+AGG - chr8_3:59527055-59527074 Msa1298740:intron 35.0%
TTGTACCACACTTATACAAG+AGG + chr8_3:59527151-59527170 None:intergenic 35.0%
TCACTCAGTTGGATCAATTT+AGG + chr8_3:59527352-59527371 None:intergenic 35.0%
TCACTCAATTGGATCAACTT+AGG + chr8_3:59527505-59527524 None:intergenic 35.0%
TTGGAGTTAGGTCAAATTTG+TGG - chr8_3:59527601-59527620 Msa1298740:intron 35.0%
! ACAAATTTTCCTTCCAGTCA+TGG + chr8_3:59527660-59527679 None:intergenic 35.0%
! TCACTTACTGAAGAAAGTGT+TGG - chr8_3:59527736-59527755 Msa1298740:intron 35.0%
GAAGTGTGACCTTATAGAAT+TGG - chr8_3:59527830-59527849 Msa1298740:intron 35.0%
CCCTAATTTCTTATTGGCAT+AGG + chr8_3:59527944-59527963 None:intergenic 35.0%
!! AAGGTGGATTAATGCTATGA+AGG - chr8_3:59528121-59528140 Msa1298740:intron 35.0%
! AGAAAGTGATTTGTGTGAAG+TGG - chr8_3:59528203-59528222 Msa1298740:three_prime_UTR 35.0%
!! TAAAACTAGGGTTTTGGTGA+CGG + chr8_3:59528492-59528511 None:intergenic 35.0%
TTCTTATTCATCCACCAAAG+AGG - chr8_3:59528512-59528531 Msa1298740:three_prime_UTR 35.0%
TCTTATTCATCCACCAAAGA+GGG - chr8_3:59528513-59528532 Msa1298740:three_prime_UTR 35.0%
AAAAGGAAAACGAGTTAGAG+GGG + chr8_3:59528571-59528590 None:intergenic 35.0%
GAAAAAGGAAAACGAGTTAG+AGG + chr8_3:59528573-59528592 None:intergenic 35.0%
! TTGTCTTTCTTGTTTCTCTC+AGG - chr8_3:59528698-59528717 Msa1298740:intron 35.0%
GTTTCTCTCAGGTATTTGAT+CGG - chr8_3:59528709-59528728 Msa1298740:intron 35.0%
! TGCCGTTTATGCTATTAACA+TGG - chr8_3:59528863-59528882 Msa1298740:intron 35.0%
TGAATTTGTGAACAGACTCA+CGG + chr8_3:59528892-59528911 None:intergenic 35.0%
GTCAAAATTAGAGGTTGGAT+GGG + chr8_3:59529078-59529097 None:intergenic 35.0%
! CATCCAACCTCTAATTTTGA+CGG - chr8_3:59529077-59529096 Msa1298740:intron 35.0%
AAAATGGCCGTCAAAATTAG+AGG + chr8_3:59529087-59529106 None:intergenic 35.0%
! CGTTTTTCTTAACTGTTCTC+AGG + chr8_3:59529111-59529130 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+AGG + chr8_3:59529188-59529207 None:intergenic 35.0%
AAATGGCCTTTGTTAACTAC+TGG - chr8_3:59529267-59529286 Msa1298740:intron 35.0%
AATGCACCAGTAGTTAACAA+AGG + chr8_3:59529276-59529295 None:intergenic 35.0%
GAAGAGAAGACTGAATTGAA+TGG - chr8_3:59529652-59529671 Msa1298740:intron 35.0%
!! AACCACAAACTTGGTTCTAA+GGG + chr8_3:59529729-59529748 None:intergenic 35.0%
! GTAGTTAATTCTGGAAGTGA+AGG - chr8_3:59529929-59529948 Msa1298740:intron 35.0%
!! TACAATGGCTTTAGTCAACT+TGG + chr8_3:59525306-59525325 None:intergenic 35.0%
TGATGAGAAGAAGGATACAA+TGG + chr8_3:59530084-59530103 None:intergenic 35.0%
! TAGAGTTTGCTTTATTGAGG+AGG - chr8_3:59530146-59530165 Msa1298740:intron 35.0%
ACTGGGAAATGAGTGAAAAT+TGG - chr8_3:59530173-59530192 Msa1298740:intron 35.0%
!!! GCATCAATTTTTAAGACCGA+AGG - chr8_3:59530236-59530255 Msa1298740:intron 35.0%
TGTTGTTAAGTGTCTCACTT+TGG - chr8_3:59530272-59530291 Msa1298740:intron 35.0%
GCAATCCTCATCTTATAAGT+TGG - chr8_3:59530529-59530548 Msa1298740:intron 35.0%
TGGTATTATAGGGTTGAGTT+AGG - chr8_3:59530549-59530568 Msa1298740:intron 35.0%
TGTAGTGTAACTCGTGTTAA+TGG + chr8_3:59530601-59530620 None:intergenic 35.0%
ACATAGAGATCGGTTATACA+AGG + chr8_3:59530649-59530668 None:intergenic 35.0%
ACATACCGATACATAGAGAT+CGG + chr8_3:59530659-59530678 None:intergenic 35.0%
GTTAAAGATGTTGCTCAAAC+CGG - chr8_3:59530896-59530915 Msa1298740:intron 35.0%
! GTCATGAATATAGGCTTTTC+CGG + chr8_3:59530918-59530937 None:intergenic 35.0%
! CCTTTACCTAGAGAAAGTTT+TGG + chr8_3:59531128-59531147 None:intergenic 35.0%
CCAAAACTTTCTCTAGGTAA+AGG - chr8_3:59531125-59531144 Msa1298740:intron 35.0%
TTAAGATCTATGACACACAC+TGG + chr8_3:59531237-59531256 None:intergenic 35.0%
AATAATTATGTCACAGGCAC+AGG - chr8_3:59531289-59531308 Msa1298740:intron 35.0%
CTTGGAATATTTGATCTCAG+AGG - chr8_3:59531392-59531411 Msa1298740:intron 35.0%
ACTGTCTCAAGTACTATTTG+TGG - chr8_3:59531650-59531669 Msa1298740:intron 35.0%
AAGTGTGGCTTATATATGTC+TGG - chr8_3:59531812-59531831 Msa1298740:CDS 35.0%
! TTGCGTTTTTAATCATGGCA+TGG - chr8_3:59531898-59531917 Msa1298740:intron 35.0%
TATTCAAATCGAGACGTCAT+TGG - chr8_3:59531988-59532007 Msa1298740:intron 35.0%
ATTCAAATCGAGACGTCATT+GGG - chr8_3:59531989-59532008 Msa1298740:intron 35.0%
AATTCACAAGGTGAATGGTA+TGG + chr8_3:59532075-59532094 None:intergenic 35.0%
ACTTGAACCTCAAATTCACA+AGG + chr8_3:59532087-59532106 None:intergenic 35.0%
!! TAAGGTGAATGAGTTGGTTT+GGG + chr8_3:59532521-59532540 None:intergenic 35.0%
!! ATAAGGTGAATGAGTTGGTT+TGG + chr8_3:59532522-59532541 None:intergenic 35.0%
GAGTTATAAGGTGAATGAGT+TGG + chr8_3:59532527-59532546 None:intergenic 35.0%
! ATTTTCAGCACTGTTTGACA+TGG - chr8_3:59532604-59532623 Msa1298740:intron 35.0%
!! TTTCAATCTCTGAAGTTTGG+TGG + chr8_3:59526857-59526876 None:intergenic 35.0%
TTGAAGAACCATGCTTGTAT+AGG - chr8_3:59532861-59532880 Msa1298740:intron 35.0%
ACTAGGCATAAGAAGATACA+AGG + chr8_3:59532897-59532916 None:intergenic 35.0%
TCTTCTTATGCCTAGTATGT+AGG - chr8_3:59532901-59532920 Msa1298740:intron 35.0%
CTCTTTGATTCCTACATACT+AGG + chr8_3:59532914-59532933 None:intergenic 35.0%
CTAGTATGTAGGAATCAAAG+AGG - chr8_3:59532912-59532931 Msa1298740:intron 35.0%
GAATCAAAGAGGAATTATGC+AGG - chr8_3:59532923-59532942 Msa1298740:intron 35.0%
CTTGTATTACTGGTGCAAAA+TGG - chr8_3:59533147-59533166 Msa1298740:intron 35.0%
ACTTGCACTGGAATGATTTA+AGG + chr8_3:59533202-59533221 None:intergenic 35.0%
TCCAGTGCAAGTACAAAATT+TGG - chr8_3:59533210-59533229 Msa1298740:intron 35.0%
! AGAACCTTTTGTGAGTCGTT+GGG + chr8_3:59525024-59525043 None:intergenic 40.0%
! AAGAACCTTTTGTGAGTCGT+TGG + chr8_3:59525025-59525044 None:intergenic 40.0%
!! TAGTTCTGGAAGTGAAAGAG+AGG - chr8_3:59525171-59525190 Msa1298740:three_prime_UTR 40.0%
GAACACTATAGTCTTCCTGT+TGG - chr8_3:59525203-59525222 Msa1298740:three_prime_UTR 40.0%
! AGTCTTCCTGTTGGTAGAAA+TGG - chr8_3:59525212-59525231 Msa1298740:three_prime_UTR 40.0%
! TTCCTGTTGGTAGAAATGGT+AGG - chr8_3:59525216-59525235 Msa1298740:three_prime_UTR 40.0%
! TCCTGTTGGTAGAAATGGTA+GGG - chr8_3:59525217-59525236 Msa1298740:three_prime_UTR 40.0%
TGATCAAATGTTTCCGGTGT+TGG + chr8_3:59525525-59525544 None:intergenic 40.0%
ATAACTGGAACTGGAAAAGG+TGG + chr8_3:59525663-59525682 None:intergenic 40.0%
GTGATAACTGGAACTGGAAA+AGG + chr8_3:59525666-59525685 None:intergenic 40.0%
AAGTAGGTGATAACTGGAAC+TGG + chr8_3:59525672-59525691 None:intergenic 40.0%
! GAAATGGCGTCAAGATTTTG+AGG - chr8_3:59525759-59525778 Msa1298740:intron 40.0%
TAGACATAGATTGTGCTGAG+TGG + chr8_3:59525996-59526015 None:intergenic 40.0%
ACAACCTTTGATCATCTGCA+GGG + chr8_3:59526089-59526108 None:intergenic 40.0%
CAAAATGGCTTAAACACAGC+AGG + chr8_3:59526423-59526442 None:intergenic 40.0%
! CTGCTGTGTTTAAGCCATTT+TGG - chr8_3:59526421-59526440 Msa1298740:intron 40.0%
!! CTGTGTTTAAGCCATTTTGG+CGG - chr8_3:59526424-59526443 Msa1298740:intron 40.0%
TTCTTCATAAGCCGCCAAAA+TGG + chr8_3:59526438-59526457 None:intergenic 40.0%
GTTAAAATCACATGCGTCTC+AGG - chr8_3:59526461-59526480 Msa1298740:intron 40.0%
!! TCAGCCTTGTTTGACATGAT+TGG - chr8_3:59526754-59526773 Msa1298740:intron 40.0%
TGGACCAATCATGTCAAACA+AGG + chr8_3:59526761-59526780 None:intergenic 40.0%
TTGCTCTGTAGAAACTCTCA+AGG - chr8_3:59526808-59526827 Msa1298740:three_prime_UTR 40.0%
! GAAGAACTATGGTGGAGATA+AGG - chr8_3:59526922-59526941 Msa1298740:three_prime_UTR 40.0%
GAGAGTCAAATTCATGTACC+TGG - chr8_3:59527014-59527033 Msa1298740:intron 40.0%
ACACATTACACATGTCTTCC+AGG + chr8_3:59527035-59527054 None:intergenic 40.0%
TTATGCGATCTAGTCTAAGG+AGG - chr8_3:59527058-59527077 Msa1298740:intron 40.0%
!! AGAGTTATTGGTTCCGATCA+TGG - chr8_3:59527429-59527448 Msa1298740:intron 40.0%
TTTGATCGAGATGCCATGAT+CGG + chr8_3:59527445-59527464 None:intergenic 40.0%
ATCATGGCATCTCGATCAAA+TGG - chr8_3:59527445-59527464 Msa1298740:intron 40.0%
TGGTCTCAAACTCACTCAAT+TGG + chr8_3:59527516-59527535 None:intergenic 40.0%
CTTCATATGCAAGCTTCGAT+TGG + chr8_3:59527536-59527555 None:intergenic 40.0%
CACAAAAACTGTGATGCTGA+TGG - chr8_3:59527563-59527582 Msa1298740:intron 40.0%
ATGGTAACCTCAAAAGACGT+TGG - chr8_3:59527582-59527601 Msa1298740:intron 40.0%
!!! CACTTTGAGTTGTTTTCCCT+CGG + chr8_3:59527888-59527907 None:intergenic 40.0%
TAGGGAGCTATAACATCTCA+AGG - chr8_3:59527959-59527978 Msa1298740:intron 40.0%
GACAAAAACTTCAGCCTCAA+AGG - chr8_3:59527981-59528000 Msa1298740:intron 40.0%
CACATTCTTTGTAGCCTTTG+AGG + chr8_3:59527998-59528017 None:intergenic 40.0%
! TGATGGTGAAGTAGTGCATT+TGG - chr8_3:59528046-59528065 Msa1298740:intron 40.0%
AATGTGCCATGAAAGACTCA+AGG - chr8_3:59528102-59528121 Msa1298740:intron 40.0%
AATCCACCTTGAGTCTTTCA+TGG + chr8_3:59528111-59528130 None:intergenic 40.0%
TGAAGTGGATGTGTAAAGTG+AGG - chr8_3:59528218-59528237 Msa1298740:three_prime_UTR 40.0%
! GTTTGGTATCGGGTAATCAA+AGG - chr8_3:59528423-59528442 Msa1298740:intron 40.0%
CTTATTCATCCACCAAAGAG+GGG - chr8_3:59528514-59528533 Msa1298740:three_prime_UTR 40.0%
GCAGATCCAATCAATGACTT+TGG - chr8_3:59528762-59528781 Msa1298740:intron 40.0%
ATGACGCCAAAGTCATTGAT+TGG + chr8_3:59528771-59528790 None:intergenic 40.0%
AAAATTAGAGGTTGGATGGG+AGG + chr8_3:59529075-59529094 None:intergenic 40.0%
CGTCAAAATTAGAGGTTGGA+TGG + chr8_3:59529079-59529098 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_3:59529448-59529467 Msa1298740:intron 40.0%
!!! TGGATTTTGGAGCATAGATG+CGG - chr8_3:59529602-59529621 Msa1298740:intron 40.0%
ATCCCTTAGAACCAAGTTTG+TGG - chr8_3:59529724-59529743 Msa1298740:intron 40.0%
!! GAACCACAAACTTGGTTCTA+AGG + chr8_3:59529730-59529749 None:intergenic 40.0%
! TGGATTGCATTTGGAGTTGA+AGG + chr8_3:59529766-59529785 None:intergenic 40.0%
GTGAGTCATTGGATTGCATT+TGG + chr8_3:59529775-59529794 None:intergenic 40.0%
GAATACTATAGTCTTCCCGT+TGG - chr8_3:59529966-59529985 Msa1298740:intron 40.0%
ATCCCTACCATTTCTACCAA+CGG + chr8_3:59525222-59525241 None:intergenic 40.0%
! AGTTTGCTTTATTGAGGAGG+TGG - chr8_3:59530149-59530168 Msa1298740:intron 40.0%
TTTATTGAGGAGGTGGAACT+GGG - chr8_3:59530156-59530175 Msa1298740:intron 40.0%
ACAAACATTGGACATGCCTT+CGG + chr8_3:59530255-59530274 None:intergenic 40.0%
!! AATATCGGCTTGTAAGGTGA+GGG + chr8_3:59530338-59530357 None:intergenic 40.0%
!! CCAAACAATATCGGCTTGTA+AGG + chr8_3:59530344-59530363 None:intergenic 40.0%
CCTTACAAGCCGATATTGTT+TGG - chr8_3:59530341-59530360 Msa1298740:intron 40.0%
GATCTGTCTCACTGAATCAT+AGG - chr8_3:59530688-59530707 Msa1298740:intron 40.0%
TGGTTGAGTAGGTGGAAATT+AGG + chr8_3:59530771-59530790 None:intergenic 40.0%
ATAAACATAGAGGGTCTGGT+TGG + chr8_3:59530791-59530810 None:intergenic 40.0%
! GAAATGGCGTCAAGATTTTG+AGG - chr8_3:59525759-59525778 Msa1298740:intron 40.0%
ACTTTCTCTAGGTAAAGGAC+AGG - chr8_3:59531130-59531149 Msa1298740:intron 40.0%
CATTGAGTAAGCTTCCAACT+GGG - chr8_3:59531357-59531376 Msa1298740:intron 40.0%
AGTATCTGTTCTTTCCCAGT+TGG + chr8_3:59531374-59531393 None:intergenic 40.0%
ACTGGGAAAGAACAGATACT+TGG - chr8_3:59531374-59531393 Msa1298740:intron 40.0%
TTATAGTTAGAACTCCACGG+TGG - chr8_3:59531486-59531505 Msa1298740:intron 40.0%
CATGAACTACATTACCTTGC+TGG - chr8_3:59531532-59531551 Msa1298740:intron 40.0%
GGAACCATTTATTTCCAGCA+AGG + chr8_3:59531549-59531568 None:intergenic 40.0%
AAGCCACACTTCAGTACAAA+GGG + chr8_3:59531803-59531822 None:intergenic 40.0%
TAAGCCACACTTCAGTACAA+AGG + chr8_3:59531804-59531823 None:intergenic 40.0%
TTCAAATCGAGACGTCATTG+GGG - chr8_3:59531990-59532009 Msa1298740:intron 40.0%
! ATGGTTGGCTACCAACATTA+GGG + chr8_3:59532056-59532075 None:intergenic 40.0%
! TATGGTTGGCTACCAACATT+AGG + chr8_3:59532057-59532076 None:intergenic 40.0%
CCTCAAATTCACAAGGTGAA+TGG + chr8_3:59532080-59532099 None:intergenic 40.0%
CCATTCACCTTGTGAATTTG+AGG - chr8_3:59532077-59532096 Msa1298740:CDS 40.0%
AGAACCTCCCTATTAAGATC+AGG - chr8_3:59532110-59532129 Msa1298740:CDS 40.0%
GGAACCACCTGATCTTAATA+GGG + chr8_3:59532120-59532139 None:intergenic 40.0%
TGGAACCACCTGATCTTAAT+AGG + chr8_3:59532121-59532140 None:intergenic 40.0%
! CACGAGTTCCTCTTTTCTTT+GGG - chr8_3:59532179-59532198 Msa1298740:intron 40.0%
!! AGTTCCTCTTTTCTTTGGGA+TGG - chr8_3:59532183-59532202 Msa1298740:intron 40.0%
TGGTTCGAGTGAAAGAGTTA+AGG + chr8_3:59532409-59532428 None:intergenic 40.0%
TTGGGGGAGAGAAAAAAGAT+TGG + chr8_3:59532503-59532522 None:intergenic 40.0%
!! AAGGTGAATGAGTTGGTTTG+GGG + chr8_3:59532520-59532539 None:intergenic 40.0%
! AAGATTTTGCTCTGCAGAGA+CGG - chr8_3:59532656-59532675 Msa1298740:intron 40.0%
AGAGGAATTATGCAGGAGAT+AGG - chr8_3:59532930-59532949 Msa1298740:intron 40.0%
GAGGAATTATGCAGGAGATA+GGG - chr8_3:59532931-59532950 Msa1298740:intron 40.0%
AAGAACCAAATTCGTCTGCT+TGG - chr8_3:59533025-59533044 Msa1298740:CDS 40.0%
TGTTTATGCGATCCGATATG+AGG - chr8_3:59533059-59533078 Msa1298740:CDS 40.0%
! GCCAAATTTTGTACTTGCAC+TGG + chr8_3:59533214-59533233 None:intergenic 40.0%
TGGCTGTTACTATGATTCAG+AGG - chr8_3:59533230-59533249 Msa1298740:CDS 40.0%
! CTATGATTCAGAGGAGTACA+CGG - chr8_3:59533239-59533258 Msa1298740:CDS 40.0%
ATTTCTCTTGTTCGCGAGTA+TGG - chr8_3:59533269-59533288 Msa1298740:CDS 40.0%
TGAAGAAAGACGAGGAAGAG+TGG + chr8_3:59524941-59524960 None:intergenic 45.0%
TCAACCCAACGACTCACAAA+AGG - chr8_3:59525017-59525036 Msa1298740:three_prime_UTR 45.0%
TCCCTACCATTTCTACCAAC+AGG + chr8_3:59525221-59525240 None:intergenic 45.0%
GCACCAACATTTCTGTCCAA+AGG - chr8_3:59525456-59525475 Msa1298740:three_prime_UTR 45.0%
ACGCCTTTGGACAGAAATGT+TGG + chr8_3:59525462-59525481 None:intergenic 45.0%
!! GAGGGTCTTGTTGCTTAAGT+AGG + chr8_3:59525688-59525707 None:intergenic 45.0%
CACAACCTTTGATCATCTGC+AGG + chr8_3:59526090-59526109 None:intergenic 45.0%
CATTGAGTAAGCTTCCCACT+GGG - chr8_3:59526130-59526149 Msa1298740:intron 45.0%
ATTGAGTAAGCTTCCCACTG+GGG - chr8_3:59526131-59526150 Msa1298740:intron 45.0%
AGTATTTCCTCTTCCCCAGT+GGG + chr8_3:59526147-59526166 None:intergenic 45.0%
AAGTATTTCCTCTTCCCCAG+TGG + chr8_3:59526148-59526167 None:intergenic 45.0%
!! TGATCTGAGAGGTTTTGGTC+CGG - chr8_3:59526176-59526195 Msa1298740:intron 45.0%
TGTTACATTGGTGGGAGAGT+TGG - chr8_3:59526640-59526659 Msa1298740:intron 45.0%
! CCTAACTCCAACGTCTTTTG+AGG + chr8_3:59527592-59527611 None:intergenic 45.0%
CCTCAAAAGACGTTGGAGTT+AGG - chr8_3:59527589-59527608 Msa1298740:intron 45.0%
TACAGTCTACACACCATGAC+TGG - chr8_3:59527644-59527663 Msa1298740:intron 45.0%
GGTTACAAGATGATCACCGA+GGG - chr8_3:59527869-59527888 Msa1298740:intron 45.0%
AAAGTGAGGCAGAATCCAAG+TGG - chr8_3:59528232-59528251 Msa1298740:three_prime_UTR 45.0%
TATTTGGGCACTCATCCACT+TGG + chr8_3:59528250-59528269 None:intergenic 45.0%
TGGATGAGTGCCCAAATACA+AGG - chr8_3:59528252-59528271 Msa1298740:three_prime_UTR 45.0%
CACCAAAGAGGGGTGATTTA+GGG - chr8_3:59528524-59528543 Msa1298740:three_prime_UTR 45.0%
! CGAGTTAGAGGGGTGATTTT+GGG + chr8_3:59528561-59528580 None:intergenic 45.0%
! ACGAGTTAGAGGGGTGATTT+TGG + chr8_3:59528562-59528581 None:intergenic 45.0%
ATCCGGAGACATGGTTATTC+CGG - chr8_3:59528802-59528821 Msa1298740:intron 45.0%
TGGCCGTCAAAATTAGAGGT+TGG + chr8_3:59529083-59529102 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_3:59529447-59529466 Msa1298740:intron 45.0%
!!! ATTTTGGAGCATAGATGCGG+TGG - chr8_3:59529605-59529624 Msa1298740:intron 45.0%
!!! TTTTGGAGCATAGATGCGGT+GGG - chr8_3:59529606-59529625 Msa1298740:intron 45.0%
AAGACTGAATTGAATGGCGC+TGG - chr8_3:59529658-59529677 Msa1298740:intron 45.0%
TGAAGAAAGACGAGGAAGAG+TGG + chr8_3:59524941-59524960 None:intergenic 45.0%
CTAAGGGATGAAGAAAGACG+AGG + chr8_3:59529713-59529732 None:intergenic 45.0%
AGAGCTTCGAACCACAAACT+TGG + chr8_3:59529738-59529757 None:intergenic 45.0%
AAGTACCTTGCGTGAGTCAT+TGG + chr8_3:59529786-59529805 None:intergenic 45.0%
! AGTCTTCCCGTTGGTAGAAA+TGG - chr8_3:59529975-59529994 Msa1298740:intron 45.0%
! TTCCCGTTGGTAGAAATGGT+AGG - chr8_3:59529979-59529998 Msa1298740:intron 45.0%
! TCCCGTTGGTAGAAATGGTA+GGG - chr8_3:59529980-59529999 Msa1298740:intron 45.0%
TCCCTACCATTTCTACCAAC+GGG + chr8_3:59525221-59525240 None:intergenic 45.0%
CTTTATTGAGGAGGTGGAAC+TGG - chr8_3:59530155-59530174 Msa1298740:intron 45.0%
!! CAATATCGGCTTGTAAGGTG+AGG + chr8_3:59530339-59530358 None:intergenic 45.0%
AATTGTGATGGCCTGATAGC+AGG + chr8_3:59530430-59530449 None:intergenic 45.0%
TGCTATCAGGCCATCACAAT+TGG - chr8_3:59530429-59530448 Msa1298740:intron 45.0%
GCTATCAGGCCATCACAATT+GGG - chr8_3:59530430-59530449 Msa1298740:intron 45.0%
! AGAAATGGACATCTGGAGTG+TGG + chr8_3:59530456-59530475 None:intergenic 45.0%
ACACTCCAGATGTCCATTTC+TGG - chr8_3:59530455-59530474 Msa1298740:intron 45.0%
CACTCCAGATGTCCATTTCT+GGG - chr8_3:59530456-59530475 Msa1298740:intron 45.0%
! ATGTCCATTTCTGGGAGTGA+AGG - chr8_3:59530464-59530483 Msa1298740:intron 45.0%
GAAATTAGGACTGGAACAGG+TGG + chr8_3:59530757-59530776 None:intergenic 45.0%
GTGGAAATTAGGACTGGAAC+AGG + chr8_3:59530760-59530779 None:intergenic 45.0%
GAGTAGGTGGAAATTAGGAC+TGG + chr8_3:59530766-59530785 None:intergenic 45.0%
! TGTTACTAATCAGAGTGCCC+AGG + chr8_3:59531205-59531224 None:intergenic 45.0%
GATCTATGACACACACTGGT+AGG + chr8_3:59531233-59531252 None:intergenic 45.0%
ATAACTTCTCATCGTCCGCA+GGG + chr8_3:59531316-59531335 None:intergenic 45.0%
GCATTGAGTAAGCTTCCAAC+TGG - chr8_3:59531356-59531375 Msa1298740:intron 45.0%
AGTACTTGAGACAGTCGCTT+CGG + chr8_3:59531645-59531664 None:intergenic 45.0%
CTTCCCTTTGTACTGAAGTG+TGG - chr8_3:59531797-59531816 Msa1298740:CDS 45.0%
! GGGCGAGAGTGTACATAATT+TGG + chr8_3:59531859-59531878 None:intergenic 45.0%
TCAAATCGAGACGTCATTGG+GGG - chr8_3:59531991-59532010 Msa1298740:intron 45.0%
CATTGGGGGTAGAGAGAAAT+AGG - chr8_3:59532005-59532024 Msa1298740:intron 45.0%
TGTTGGGGTAACCCTAATGT+TGG - chr8_3:59532042-59532061 Msa1298740:CDS 45.0%
CACAAGGTGAATGGTATGGT+TGG + chr8_3:59532071-59532090 None:intergenic 45.0%
ACCTCCCTATTAAGATCAGG+TGG - chr8_3:59532113-59532132 Msa1298740:CDS 45.0%
ACCACCTGATCTTAATAGGG+AGG + chr8_3:59532117-59532136 None:intergenic 45.0%
! TCTAGCTCACCTGATGATTC+TGG + chr8_3:59532146-59532165 None:intergenic 45.0%
GAAAAGAGGAACTCGTGGAT+AGG + chr8_3:59532176-59532195 None:intergenic 45.0%
CCAAAGAAAAGAGGAACTCG+TGG + chr8_3:59532181-59532200 None:intergenic 45.0%
! CCACGAGTTCCTCTTTTCTT+TGG - chr8_3:59532178-59532197 Msa1298740:intron 45.0%
CTTGCCATCCCAAAGAAAAG+AGG + chr8_3:59532190-59532209 None:intergenic 45.0%
!! AGGTGAATGAGTTGGTTTGG+GGG + chr8_3:59532519-59532538 None:intergenic 45.0%
ATGGGATGCCTATACAAGCA+TGG + chr8_3:59532872-59532891 None:intergenic 45.0%
GTCTTCCAAGCAGACGAATT+TGG + chr8_3:59533033-59533052 None:intergenic 45.0%
AATTCGTCTGCTTGGAAGAC+AGG - chr8_3:59533033-59533052 Msa1298740:CDS 45.0%
!! AAAAAACAAAATATATATAT+AGG - chr8_3:59529509-59529528 Msa1298740:intron 5.0%
AGAAAGACGAGGAAGAGTGG+TGG + chr8_3:59524938-59524957 None:intergenic 50.0%
GCAGCTCCGAACTACGAATT+TGG + chr8_3:59524980-59524999 None:intergenic 50.0%
!! GTGAGTCGTTGGGTTGATGT+TGG + chr8_3:59525014-59525033 None:intergenic 50.0%
CAACAACAGACCTGTGCTTG+TGG - chr8_3:59525858-59525877 Msa1298740:intron 50.0%
AGGACCCTGCAGATGATCAA+AGG - chr8_3:59526082-59526101 Msa1298740:intron 50.0%
GCATTGAGTAAGCTTCCCAC+TGG - chr8_3:59526129-59526148 Msa1298740:intron 50.0%
TGCGATCTAGTCTAAGGAGG+AGG - chr8_3:59527061-59527080 Msa1298740:intron 50.0%
CTCACACACACTCACTCAGT+TGG + chr8_3:59527363-59527382 None:intergenic 50.0%
GTCTACACACCATGACTGGA+AGG - chr8_3:59527648-59527667 Msa1298740:intron 50.0%
GGGTTACAAGATGATCACCG+AGG - chr8_3:59527868-59527887 Msa1298740:intron 50.0%
GTGCCATGAAAGACTCAAGG+TGG - chr8_3:59528105-59528124 Msa1298740:intron 50.0%
GTGACGGCTCACAAGAGAAA+GGG + chr8_3:59528476-59528495 None:intergenic 50.0%
CCTAAATCACCCCTCTTTGG+TGG + chr8_3:59528526-59528545 None:intergenic 50.0%
CCACCAAAGAGGGGTGATTT+AGG - chr8_3:59528523-59528542 Msa1298740:three_prime_UTR 50.0%
GACCCTAAATCACCCCTCTT+TGG + chr8_3:59528529-59528548 None:intergenic 50.0%
CTCCGGAATAACCATGTCTC+CGG + chr8_3:59528807-59528826 None:intergenic 50.0%
AGAAAGACGAGGAAGAGTGG+TGG + chr8_3:59524938-59524957 None:intergenic 50.0%
GCAATCCAATGACTCACGCA+AGG - chr8_3:59529778-59529797 Msa1298740:intron 50.0%
CACTCCCAGAAATGGACATC+TGG + chr8_3:59530463-59530482 None:intergenic 50.0%
TGTTCATGCCTACTCTCGAC+AGG + chr8_3:59530492-59530511 None:intergenic 50.0%
CAATGACAGACCTGTGCTTG+TGG - chr8_3:59530949-59530968 Msa1298740:intron 50.0%
CATAACTTCTCATCGTCCGC+AGG + chr8_3:59531317-59531336 None:intergenic 50.0%
TTCATGACGCTGTCAGCTCT+TGG + chr8_3:59531570-59531589 None:intergenic 50.0%
! GGCTTGGTAAGCTGCCAAAT+TGG + chr8_3:59531696-59531715 None:intergenic 50.0%
TGGGGGTAGAGAGAAATAGG+AGG - chr8_3:59532008-59532027 Msa1298740:intron 50.0%
AGGAGGTAACTGCTCACTGT+TGG - chr8_3:59532025-59532044 Msa1298740:intron 50.0%
GGAGGTAACTGCTCACTGTT+GGG - chr8_3:59532026-59532045 Msa1298740:intron 50.0%
GAGGTAACTGCTCACTGTTG+GGG - chr8_3:59532027-59532046 Msa1298740:intron 50.0%
GGTTCCATGCCAGAATCATC+AGG - chr8_3:59532134-59532153 Msa1298740:CDS 50.0%
CTCACCTGATGATTCTGGCA+TGG + chr8_3:59532141-59532160 None:intergenic 50.0%
AGACGAGGAAGAGTGGTGGT+TGG + chr8_3:59524934-59524953 None:intergenic 55.0%
ACACGTGTCAGACACGCCTT+TGG + chr8_3:59525475-59525494 None:intergenic 55.0%
CAACAGACCTGTGCTTGTGG+TGG - chr8_3:59525861-59525880 Msa1298740:intron 55.0%
GATGCTACCACCACAAGCAC+AGG + chr8_3:59525871-59525890 None:intergenic 55.0%
TAAGCTTCCCACTGGGGAAG+AGG - chr8_3:59526137-59526156 Msa1298740:intron 55.0%
! GGTGACGGCTCACAAGAGAA+AGG + chr8_3:59528477-59528496 None:intergenic 55.0%
CGTCATCCACGTTGCAGATC+CGG - chr8_3:59528785-59528804 Msa1298740:intron 55.0%
ATGTCTCCGGATCTGCAACG+TGG + chr8_3:59528794-59528813 None:intergenic 55.0%
ACGTTGCAGATCCGGAGACA+TGG - chr8_3:59528793-59528812 Msa1298740:intron 55.0%
TGTGATGGCCTGATAGCAGG+TGG + chr8_3:59530427-59530446 None:intergenic 55.0%
GGAGTGTGGCCCAATTGTGA+TGG + chr8_3:59530442-59530461 None:intergenic 55.0%
GGTGCCTTCACTCCCAGAAA+TGG + chr8_3:59530471-59530490 None:intergenic 55.0%
!! TGAAGGCACCTGTCGAGAGT+AGG - chr8_3:59530481-59530500 Msa1298740:intron 55.0%
! GGTCTGGTTGGTTGAGTAGG+TGG + chr8_3:59530779-59530798 None:intergenic 55.0%
! GAGGGTCTGGTTGGTTGAGT+AGG + chr8_3:59530782-59530801 None:intergenic 55.0%
TGACAGACCTGTGCTTGTGG+TGG - chr8_3:59530952-59530971 Msa1298740:intron 55.0%
CAAGTTAGGCAATGCCACCG+TGG + chr8_3:59531503-59531522 None:intergenic 55.0%
TTTGCTCTGCAGAGACGGTG+AGG - chr8_3:59532661-59532680 Msa1298740:intron 55.0%
GCGCGACACATGTCCAACAC+CGG - chr8_3:59525509-59525528 Msa1298740:three_prime_UTR 60.0%
GCGTCGTGTCAAGCCCTTGT+AGG - chr8_3:59525595-59525614 Msa1298740:intron 60.0%
TCTGCAGGGTCCTGTTCCTG+TGG + chr8_3:59526075-59526094 None:intergenic 60.0%
GAGCATAGATGCGGTGGGTG+TGG - chr8_3:59529611-59529630 Msa1298740:intron 60.0%
CCTGATAGCAGGTGGCCCAA+TGG + chr8_3:59530419-59530438 None:intergenic 60.0%
CCATTGGGCCACCTGCTATC+AGG - chr8_3:59530416-59530435 Msa1298740:intron 60.0%
CTCTGCAGAGACGGTGAGGA+AGG - chr8_3:59532665-59532684 Msa1298740:intron 60.0%
GCTGCGACCACCACAAGCAC+AGG + chr8_3:59530962-59530981 None:intergenic 65.0%
GTCACAGGCACAGGACCCTG+CGG - chr8_3:59531298-59531317 Msa1298740:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 59524910 59533350 59524910 ID=Msa1298740;Name=Msa1298740
chr8_3 mRNA 59524910 59533350 59524910 ID=Msa1298740-mRNA-1;Parent=Msa1298740;Name=Msa1298740-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.5|0.45|1|0.9|0.90|11|1402|253
chr8_3 exon 59524910 59525606 59524910 ID=Msa1298740-mRNA-1:exon:17276;Parent=Msa1298740-mRNA-1
chr8_3 exon 59526520 59526642 59526520 ID=Msa1298740-mRNA-1:exon:17275;Parent=Msa1298740-mRNA-1
chr8_3 exon 59526803 59526955 59526803 ID=Msa1298740-mRNA-1:exon:17274;Parent=Msa1298740-mRNA-1
chr8_3 exon 59527263 59527409 59527263 ID=Msa1298740-mRNA-1:exon:17273;Parent=Msa1298740-mRNA-1
chr8_3 exon 59528175 59528327 59528175 ID=Msa1298740-mRNA-1:exon:17272;Parent=Msa1298740-mRNA-1
chr8_3 exon 59528461 59528646 59528461 ID=Msa1298740-mRNA-1:exon:17271;Parent=Msa1298740-mRNA-1
chr8_3 exon 59531778 59531900 59531778 ID=Msa1298740-mRNA-1:exon:17270;Parent=Msa1298740-mRNA-1
chr8_3 exon 59532030 59532182 59532030 ID=Msa1298740-mRNA-1:exon:17269;Parent=Msa1298740-mRNA-1
chr8_3 exon 59532354 59532500 59532354 ID=Msa1298740-mRNA-1:exon:17268;Parent=Msa1298740-mRNA-1
chr8_3 exon 59532938 59533090 59532938 ID=Msa1298740-mRNA-1:exon:17267;Parent=Msa1298740-mRNA-1
chr8_3 exon 59533222 59533350 59533222 ID=Msa1298740-mRNA-1:exon:17266;Parent=Msa1298740-mRNA-1
chr8_3 CDS 59533222 59533350 59533222 ID=Msa1298740-mRNA-1:cds;Parent=Msa1298740-mRNA-1
chr8_3 CDS 59532938 59533090 59532938 ID=Msa1298740-mRNA-1:cds;Parent=Msa1298740-mRNA-1
chr8_3 CDS 59532354 59532500 59532354 ID=Msa1298740-mRNA-1:cds;Parent=Msa1298740-mRNA-1
chr8_3 CDS 59532030 59532182 59532030 ID=Msa1298740-mRNA-1:cds;Parent=Msa1298740-mRNA-1
chr8_3 CDS 59531778 59531900 59531778 ID=Msa1298740-mRNA-1:cds;Parent=Msa1298740-mRNA-1
chr8_3 CDS 59528590 59528646 59528590 ID=Msa1298740-mRNA-1:cds;Parent=Msa1298740-mRNA-1
chr8_3 three_prime_UTR 59528461 59528589 59528461 ID=Msa1298740-mRNA-1:three_prime_utr;Parent=Msa1298740-mRNA-1
chr8_3 three_prime_UTR 59528175 59528327 59528175 ID=Msa1298740-mRNA-1:three_prime_utr;Parent=Msa1298740-mRNA-1
chr8_3 three_prime_UTR 59527263 59527409 59527263 ID=Msa1298740-mRNA-1:three_prime_utr;Parent=Msa1298740-mRNA-1
chr8_3 three_prime_UTR 59526803 59526955 59526803 ID=Msa1298740-mRNA-1:three_prime_utr;Parent=Msa1298740-mRNA-1
chr8_3 three_prime_UTR 59526520 59526642 59526520 ID=Msa1298740-mRNA-1:three_prime_utr;Parent=Msa1298740-mRNA-1
chr8_3 three_prime_UTR 59524910 59525606 59524910 ID=Msa1298740-mRNA-1:three_prime_utr;Parent=Msa1298740-mRNA-1
Gene Sequence

>Msa1298740

ATGGCGTTGTTTCGTGTCAAACCAACCACCACTCTTCCTCGTCTTTCTTCAACAATTTCCTTTCGAACCAAATTCGTAGTTCGGAGCTGCAATCTTCAGTTCCAACATCAACCCAACGACTCACAAAAGTTAGTTCTGGAAGTGAAAGAGAGGCTTGAAAAAGAACACTATAGTCTTCCTGTTGGTAGAAATGGTAGGGATGACGAAGATATGATACAATGGTTTCTGAAAGATCGCAAGTTTGATGTTGAAGAAGCTGTTTCGAAGTTGACTAAAGCCATTAAATGGCGTCAAGATTTTGAGGTGTCTAAATTGACTGAAGAAGCCATCAAAGATATCTCTCAAACTGAAAAAGCATATTTACATGAATTTCTAGATATCAACAACAGACCTGTGCTTGTGGTGGTAGCATCAAAGCATTTTCCTAAAGAACAGGACCCTGCAGATGATCAAAGGTTGTGTGTTTTCTTAATTGAGAAGGCATTGAGTAAGCTTCCCACTGGGGAAGAGGAAATACTTGCAATATTTGATCTGAGAGGTTTTGGTCCGGAAAATGCTGATTTTAAATTCTTGGCATTCTTGTTTAATGTATTCTACAATTACTATCCCAATCGATTGTCGCAAGTATTATTTGTGGATGCTCCTGCTGTGTTTAAGCCATTTTGGCGGCTTATGAAGAAGTTGTTAAAATCACATGCGTCTCAGCATAGATGCGGTGGGTGTGGATACAGACAAGAAACTGAGAAGAGAAGACTGAATTGA

Protein sequence

>Msa1298740

MALFRVKPTTTLPRLSSTISFRTKFVVRSCNLQFQHQPNDSQKLVLEVKERLEKEHYSLPVGRNGRDDEDMIQWFLKDRKFDVEEAVSKLTKAIKWRQDFEVSKLTEEAIKDISQTEKAYLHEFLDINNRPVLVVVASKHFPKEQDPADDQRLCVFLIEKALSKLPTGEEEILAIFDLRGFGPENADFKFLAFLFNVFYNYYPNRLSQVLFVDAPAVFKPFWRLMKKLLKSHASQHRCGGCGYRQETEKRRLN*