AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0383570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0383570 MtrunA17_Chr3g0140091 96.286 350 10 1 1 347 1 350 0.0 691
Msa0383570 MtrunA17_Chr4g0019621 93.927 247 10 1 101 347 7 248 5.22e-169 470
Msa0383570 MtrunA17_Chr4g0019621 47.500 120 58 1 89 208 125 239 8.71e-28 108
Msa0383570 MtrunA17_Chr8g0390251 65.706 347 100 4 15 347 6 347 1.34e-164 463
Msa0383570 MtrunA17_Chr6g0486631 63.582 335 109 4 23 347 17 348 1.65e-151 430
Msa0383570 MtrunA17_Chr2g0288571 66.431 283 91 1 69 347 5 287 2.82e-138 394
Msa0383570 MtrunA17_Chr4g0075021 61.957 276 101 1 76 347 7 282 5.67e-129 370
Msa0383570 MtrunA17_Chr4g0075001 60.000 250 96 1 102 347 16 265 1.05e-110 323
Msa0383570 MtrunA17_Chr4g0075001 41.085 129 72 1 86 210 130 258 1.75e-26 105
Msa0383570 MtrunA17_Chr4g0028391 30.263 152 71 6 88 210 79 224 2.00e-13 68.9
Msa0383570 MtrunA17_Chr4g0028391 28.000 150 77 5 216 338 77 222 2.27e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0383570 AT1G67280.1 66.571 347 104 4 9 347 8 350 1.00e-165 466
Msa0383570 AT1G67280.2 78.544 261 56 0 87 347 2 262 1.11e-152 430
Msa0383570 AT1G11840.6 68.421 285 85 2 67 347 39 322 2.51e-139 398
Msa0383570 AT1G11840.4 69.424 278 81 1 74 347 6 283 6.34e-139 395
Msa0383570 AT1G11840.1 69.424 278 81 1 74 347 6 283 6.34e-139 395
Msa0383570 AT1G11840.3 69.424 278 81 1 74 347 6 283 6.34e-139 395
Msa0383570 AT1G11840.2 69.424 278 81 1 74 347 6 283 6.34e-139 395
Msa0383570 AT1G11840.5 68.203 217 69 0 74 290 6 222 4.59e-107 313
Msa0383570 AT1G11840.5 48.387 124 64 0 216 339 18 141 1.44e-33 124
Msa0383570 AT1G08110.3 28.767 146 77 4 88 208 30 173 5.58e-12 64.3
Msa0383570 AT1G08110.2 28.767 146 77 4 88 208 30 173 5.58e-12 64.3
Msa0383570 AT1G08110.1 28.767 146 77 4 88 208 30 173 5.58e-12 64.3
Msa0383570 AT1G08110.4 28.767 146 77 4 88 208 80 223 9.17e-12 64.7

Find 142 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATCTTCTATTATCATTT+TGG 0.140017 3_1:+86478740 None:intergenic
TGTCAAGATGTTTGCTTCTT+TGG 0.173797 3_1:-86475990 Msa0383570:three_prime_UTR
TGGTTATAGGTTTGAGCTTT+TGG 0.209102 3_1:-86477803 Msa0383570:CDS
TATGACATTGGAACTGGTTT+TGG 0.261238 3_1:-86478162 Msa0383570:CDS
CAGACCAAAACTTGGTTAAC+TGG 0.278238 3_1:-86478765 Msa0383570:CDS
AGACCCCGATGGTTGGAAAT+TGG 0.279957 3_1:-86477056 Msa0383570:intron
CAATATTAATTCAAATTTGC+AGG 0.290334 3_1:+86476231 Msa0383560:CDS
TATTGACATTTAAAATAGTA+TGG 0.294426 3_1:-86476176 Msa0383570:three_prime_UTR
TAGAAATGAACTCAGTTTGT+AGG 0.306605 3_1:-86475816 Msa0383570:three_prime_UTR
TTGAAGATCCTAGTGGTTAT+AGG 0.311803 3_1:-86477816 Msa0383570:CDS
TGTATACAAGGTTGGAGATT+TGG 0.312497 3_1:-86478710 Msa0383570:CDS
TTAAGGTATGGCCTATAAAA+TGG 0.322149 3_1:+86476484 Msa0383560:intron
ATAAAATACAATGAACTAAA+TGG 0.322295 3_1:+86475874 Msa0383560:intron
AGTAAGTTCAACTGTAAAAC+TGG 0.328366 3_1:+86478331 None:intergenic
GCATTTGAATATTTGTCTTC+CGG 0.337717 3_1:+86478380 None:intergenic
CGTAAACTGATTTAAACATT+TGG 0.346945 3_1:-86476137 Msa0383570:three_prime_UTR
GGACCCAGTTAACCAAGTTT+TGG 0.356947 3_1:+86478761 None:intergenic
CTCTTTCATCTTCTCACCAC+TGG 0.372795 3_1:-86479018 Msa0383570:CDS
CCTCCTTCATATATAGTGAT+TGG 0.373150 3_1:+86476766 None:intergenic
CGAAGCATCACTTTGCATAA+GGG 0.378451 3_1:+86477760 None:intergenic
GTGTTTGAACAGATTGCTAT+AGG 0.380967 3_1:-86477187 Msa0383570:intron
CTTCTCACCACTGGTGGTAT+TGG 0.382640 3_1:-86479009 Msa0383570:intron
TCGAAGCATCACTTTGCATA+AGG 0.390181 3_1:+86477759 None:intergenic
GCACTGGACTGTGTCTTTAG+AGG 0.393135 3_1:+86476013 Msa0383560:CDS
CGCGGCAATTCAACATGTAC+TGG 0.395036 3_1:-86476670 Msa0383570:three_prime_UTR
TGTAGCAGATGGTAACATTA+AGG 0.398859 3_1:+86479101 None:intergenic
TGCTACTTTGAAGGCACGTC+TGG 0.412837 3_1:+86475913 Msa0383560:intron
TGTTACTGTAAGCAATGTTA+AGG 0.421038 3_1:+86476467 Msa0383560:intron
GGACAAACAGTTCTGGTTAG+AGG 0.430777 3_1:+86476643 Msa0383560:CDS
GATAACTATGACATTGGAAC+TGG 0.436005 3_1:-86478168 Msa0383570:CDS
ACTGTAAAACTGGAATCTTC+AGG 0.439492 3_1:+86478341 None:intergenic
CGTGAACCTGGACCCTTACC+TGG 0.440286 3_1:-86477106 Msa0383570:CDS
CTTCTCAAACGTACAAGAAA+AGG 0.445894 3_1:+86476043 Msa0383560:CDS
GCGAGGAGCTGCTACTTTGA+AGG 0.446885 3_1:+86475904 Msa0383560:intron
GCACGTCTGGAGAAAGGGCT+TGG 0.450167 3_1:+86475926 Msa0383560:CDS
TCCCAATTACTCGGTGGAAA+AGG 0.451032 3_1:-86478841 Msa0383570:CDS
GTAAAGAGGACAAACAGTTC+TGG 0.451439 3_1:+86476636 Msa0383560:CDS
GATAGACAACCCTGAGGAAA+AGG 0.451770 3_1:-86477564 Msa0383570:intron
ACTAACTATGACAAAGGAAA+TGG 0.452864 3_1:-86477332 Msa0383570:CDS
CAGTACACAGTAGCCAAGTT+GGG 0.453964 3_1:-86477410 Msa0383570:CDS
TTTCCCTTCCGGGCCAAGCT+GGG 0.455831 3_1:-86476538 Msa0383570:three_prime_UTR
GTCTAAGCAAACAACAATCT+TGG 0.456339 3_1:+86477075 None:intergenic
AGAACAGGACCATTAGCTTC+AGG 0.460964 3_1:+86477380 None:intergenic
ACAGTAGCCAAGTTGGGATA+TGG 0.468535 3_1:-86477404 Msa0383570:CDS
TAGGAGATCCAAGACATGTT+TGG 0.469553 3_1:-86479209 Msa0383570:five_prime_UTR
CATACCAATTTCCAACCATC+GGG 0.472722 3_1:+86477052 None:intergenic
GGAGTGGATAACTATGACAT+TGG 0.474181 3_1:-86478174 Msa0383570:CDS
CTTTACAATATCTACTGTCT+TGG 0.481456 3_1:+86477906 None:intergenic
AGCTTGGCCCGGAAGGGAAA+AGG 0.486161 3_1:+86476541 Msa0383560:CDS
GCGAAGATTATCCGTGAACC+TGG 0.488185 3_1:-86477118 Msa0383570:CDS
CAATAACAGGAGTTCTTCAC+TGG 0.490229 3_1:+86476194 Msa0383560:intron
TTGAAGGCACGTCTGGAGAA+AGG 0.490313 3_1:+86475920 Msa0383560:intron
GTTAAGAAAACGTGATATAC+CGG 0.490695 3_1:-86478399 Msa0383570:CDS
AGCAAACATCTTGACAGCAC+TGG 0.491176 3_1:+86475997 Msa0383560:CDS
TAGATATTGTAAAGGCGAAA+GGG 0.492189 3_1:-86477897 Msa0383570:CDS
TCAGTACACAGTAGCCAAGT+TGG 0.494157 3_1:-86477411 Msa0383570:intron
ATTTCTACATGTTGTATACA+AGG 0.495236 3_1:-86478722 Msa0383570:CDS
CTTGGTGTTGATACCAGGTA+AGG 0.496690 3_1:+86477093 None:intergenic
TGCCCAACCAGACCAAAACT+TGG 0.500203 3_1:-86478773 Msa0383570:CDS
CAGGTAAGGGTCCAGGTTCA+CGG 0.500509 3_1:+86477107 None:intergenic
CTACATGTTGTATACAAGGT+TGG 0.505014 3_1:-86478718 Msa0383570:CDS
CCTCCAATCACTATATATGA+AGG 0.505451 3_1:-86476769 Msa0383570:three_prime_UTR
TTCTTCACTAAACTTATAGT+AGG 0.505475 3_1:-86476841 Msa0383570:three_prime_UTR
GGATATGGTCCTGAAGCTAA+TGG 0.505691 3_1:-86477389 Msa0383570:CDS
TTGTTAATTTCAAAGGCTGT+TGG 0.505802 3_1:-86477605 Msa0383570:intron
ATTAAGTATGAGCAATGTAA+TGG 0.507216 3_1:+86475773 Msa0383560:intron
TGAAGGCACGTCTGGAGAAA+GGG 0.507302 3_1:+86475921 Msa0383560:intron
ATATCCCAGCTTGGCCCGGA+AGG 0.509324 3_1:+86476534 Msa0383560:CDS
CCTCAGGGTTGTCTATCTTG+TGG 0.510152 3_1:+86477570 None:intergenic
TTCTTAACAGCTTCATGCCA+AGG 0.512814 3_1:+86478414 None:intergenic
ACACCCGACCAAACATGTCT+TGG 0.515413 3_1:+86479201 None:intergenic
TTGCATAAGGGTTCGCGAGT+AGG 0.520825 3_1:+86477772 None:intergenic
TTATACGTCAGTTCTAGAAC+AGG 0.522234 3_1:+86477365 None:intergenic
GATCCAAGACATGTTTGGTC+GGG 0.522515 3_1:-86479204 Msa0383570:five_prime_UTR
TTGATACCAGGTAAGGGTCC+AGG 0.528793 3_1:+86477100 None:intergenic
AGCGATATCCCAGCTTGGCC+CGG 0.529305 3_1:+86476530 Msa0383560:CDS
CCACCGAGTAATTGGGATTG+TGG 0.531788 3_1:+86478847 None:intergenic
TTTCATCTTCTCACCACTGG+TGG 0.535528 3_1:-86479015 Msa0383570:CDS
CAAGACAGTAGATATTGTAA+AGG 0.536229 3_1:-86477905 Msa0383570:CDS
CCATACCAATTTCCAACCAT+CGG 0.536613 3_1:+86477051 None:intergenic
ATTTGAATGCGGAAGTAAAG+AGG 0.536918 3_1:+86476622 Msa0383560:CDS
GACAAACAGTTCTGGTTAGA+GGG 0.540714 3_1:+86476644 Msa0383560:CDS
CCGCACTTCTCCTCAACAGT+TGG 0.540993 3_1:-86475962 Msa0383570:three_prime_UTR
TCACTATATATGAAGGAGGA+AGG 0.541579 3_1:-86476762 Msa0383570:three_prime_UTR
AGATTCTACACTGAATGCCT+TGG 0.547114 3_1:-86478431 Msa0383570:CDS
CCTTCATATATAGTGATTGG+AGG 0.550530 3_1:+86476769 None:intergenic
GGTCTTAATGTTGTAGCAGA+TGG 0.550784 3_1:+86479090 None:intergenic
TAAGTTTAGTGAAGAAGTGT+AGG 0.554352 3_1:+86476848 None:intergenic
ACAATCTTGGTGTTGATACC+AGG 0.558211 3_1:+86477088 None:intergenic
TTCAGGACCATATCCCAACT+TGG 0.559056 3_1:+86477397 None:intergenic
GTAGATATTGTAAAGGCGAA+AGG 0.560029 3_1:-86477898 Msa0383570:CDS
TTTGCTTAGACCCCGATGGT+TGG 0.562504 3_1:-86477063 Msa0383570:CDS
CTGTAAGCAATGTTAAGGTA+TGG 0.565960 3_1:+86476472 Msa0383560:intron
AGAATTGTTCAAATTAGCAA+AGG 0.569445 3_1:-86478815 Msa0383570:CDS
GGAAAGGTTACAAGAGAACC+AGG 0.573831 3_1:-86477874 Msa0383570:CDS
TAAACTTATAGTAGGCTACT+AGG 0.574564 3_1:-86476833 Msa0383570:three_prime_UTR
CACTATATATGAAGGAGGAA+GGG 0.574918 3_1:-86476761 Msa0383570:three_prime_UTR
CTACCACAATCCCAATTACT+CGG 0.578082 3_1:-86478850 Msa0383570:CDS
AACTAAATGGCAGCATTGCG+AGG 0.578223 3_1:+86475887 Msa0383560:intron
AGAAGGCTATGACACGATCA+TGG 0.580029 3_1:+86477728 None:intergenic
CAAAGGAAATGGCTATGCAC+AGG 0.585145 3_1:-86477321 Msa0383570:intron
TTCAGTATGTTACATTGGCG+CGG 0.587089 3_1:-86476688 Msa0383570:three_prime_UTR
AGAGAACCAGGGTCTGTCAA+AGG 0.592272 3_1:-86477862 Msa0383570:CDS
AGATCCAAGACATGTTTGGT+CGG 0.592886 3_1:-86479205 Msa0383570:five_prime_UTR
ACTAACTGCAGCATTAACAT+AGG 0.596084 3_1:-86479175 Msa0383570:five_prime_UTR
TGTGCAGCGATATCCCAGCT+TGG 0.596256 3_1:+86476525 Msa0383560:CDS
CTTCATATATAGTGATTGGA+GGG 0.597313 3_1:+86476770 None:intergenic
TATCCCAGCTTGGCCCGGAA+GGG 0.598830 3_1:+86476535 Msa0383560:CDS
AGACCAAAACTTGGTTAACT+GGG 0.599796 3_1:-86478764 Msa0383570:CDS
GAGCTACCTTTGACAGACCC+TGG 0.602880 3_1:+86477856 None:intergenic
AAAATGGCAGATATAGTCAC+CGG 0.606175 3_1:+86476500 Msa0383560:CDS
GGCGTCACTAACTATGACAA+AGG 0.608980 3_1:-86477338 Msa0383570:CDS
AGATATTGTAAAGGCGAAAG+GGG 0.617229 3_1:-86477896 Msa0383570:CDS
TGAACAGATTGCTATAGGCA+CGG 0.617304 3_1:-86477182 Msa0383570:intron
TGGGATATCGCTGCACACTC+CGG 0.618172 3_1:-86476519 Msa0383570:three_prime_UTR
CTGGACTGTGTCTTTAGAGG+AGG 0.632407 3_1:+86476016 Msa0383560:CDS
GCAGAAGCAATCAAATCATG+TGG 0.633710 3_1:-86477142 Msa0383570:CDS
CCAATCACTATATATGAAGG+AGG 0.636230 3_1:-86476766 Msa0383570:three_prime_UTR
CTAGAACTGACGTATAACTA+CGG 0.638025 3_1:-86477359 Msa0383570:CDS
TACTACGATTCCAACTGTTG+AGG 0.640288 3_1:+86475952 Msa0383560:CDS
GTTGTTTGCTTAGACCCCGA+TGG 0.640817 3_1:-86477067 Msa0383570:CDS
TTGGTGTTGATACCAGGTAA+GGG 0.642110 3_1:+86477094 None:intergenic
GATATTGTAAAGGCGAAAGG+GGG 0.643425 3_1:-86477895 Msa0383570:CDS
TGAAGTCATTGTTACAAACA+TGG 0.646911 3_1:-86476084 Msa0383570:three_prime_UTR
AGCTCAAACCTATAACCACT+AGG 0.647923 3_1:+86477808 None:intergenic
CCAATGGTTGCATAGTAACG+TGG 0.664075 3_1:-86479245 None:intergenic
AGATTAATAGAATTTGAATG+CGG 0.671794 3_1:+86476611 Msa0383560:CDS
GGAAGGGAAAAGGAAGACAA+CGG 0.672432 3_1:+86476551 Msa0383560:CDS
GAACTGGAGTGACAATAGCA+TGG 0.672640 3_1:-86476883 Msa0383570:exon
TGCAAAGTGATGCTTCGAGT+AGG 0.675317 3_1:-86477754 Msa0383570:CDS
ATAACCACTAGGATCTTCAA+CGG 0.678581 3_1:+86477819 None:intergenic
GAGATTACCAATACCACCAG+TGG 0.692240 3_1:+86479002 None:intergenic
ATTCTTCGTGAAGATGACGA+TGG 0.699995 3_1:+86479045 None:intergenic
ACGTGGCACTATAATAACGT+AGG 0.702044 3_1:-86479228 Msa0383570:five_prime_UTR
CCACAATCCCAATTACTCGG+TGG 0.710692 3_1:-86478847 Msa0383570:CDS
CCAACTGTTGAGGAGAAGTG+CGG 0.712451 3_1:+86475962 Msa0383560:CDS
GCTTCCGTTGAAGATCCTAG+TGG 0.716192 3_1:-86477823 Msa0383570:CDS
GGTGATTGCAGATTATGGAG+TGG 0.722660 3_1:-86478190 Msa0383570:intron
GTGATGCTACAACTACAACA+AGG 0.730518 3_1:+86479069 None:intergenic
ATACCAATTTCCAACCATCG+GGG 0.766717 3_1:+86477053 None:intergenic
GAAAGGTTACAAGAGAACCA+GGG 0.783522 3_1:-86477873 Msa0383570:CDS
CCACAAGATAGACAACCCTG+AGG 0.800561 3_1:-86477570 Msa0383570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTTTTATGATTTTTACA+TGG - chr3_1:86477752-86477771 Msa0383570:CDS 15.0%
!! TAACATACTGAAAAATAATA+AGG + chr3_1:86478314-86478333 None:intergenic 15.0%
!!! TATTGACATTTAAAATAGTA+TGG - chr3_1:86478834-86478853 Msa0383570:CDS 15.0%
!! ATAAAATACAATGAACTAAA+TGG + chr3_1:86479139-86479158 None:intergenic 15.0%
!!! GAAATCTTCTATTATCATTT+TGG + chr3_1:86476273-86476292 Msa0383560:intron 20.0%
!! TAAGCTATTTATACTAATAG+AGG + chr3_1:86476375-86476394 Msa0383560:CDS 20.0%
!!! AAATATTCAAATGCTTTTCT+TGG - chr3_1:86476639-86476658 Msa0383570:three_prime_UTR 20.0%
!!! TAATGCTACTTTTTTTTTTC+CGG - chr3_1:86476720-86476739 Msa0383570:three_prime_UTR 20.0%
!! TTCAATGTTCATCATAATAA+GGG + chr3_1:86476993-86477012 None:intergenic 20.0%
!! ATTCAATGTTCATCATAATA+AGG + chr3_1:86476994-86477013 None:intergenic 20.0%
!! AGTTAATGTAATTGTTATGA+TGG - chr3_1:86477325-86477344 Msa0383570:CDS 20.0%
!! AACATATTACATCAAATACA+AGG + chr3_1:86477994-86478013 None:intergenic 20.0%
!!! GATTTTTCTGAAAAAATTGT+TGG + chr3_1:86478203-86478222 None:intergenic 20.0%
!!! TATTTTTCAGTATGTTACAT+TGG - chr3_1:86478317-86478336 Msa0383570:intron 20.0%
!! AGATTAATAGAATTTGAATG+CGG + chr3_1:86478402-86478421 None:intergenic 20.0%
!!! AAGTTTTGTATACTGAAATT+TGG - chr3_1:86478579-86478598 Msa0383570:intron 20.0%
!! CAATATTAATTCAAATTTGC+AGG + chr3_1:86478782-86478801 None:intergenic 20.0%
!!! CTATTTTAAATGTCAATAAC+AGG + chr3_1:86478832-86478851 None:intergenic 20.0%
! AGAATTGTTCAAATTAGCAA+AGG - chr3_1:86476195-86476214 Msa0383570:three_prime_UTR 25.0%
! ATTTCTACATGTTGTATACA+AGG - chr3_1:86476288-86476307 Msa0383570:intron 25.0%
!! AGTATGTTCTACTTCAATTT+TGG - chr3_1:86476335-86476354 Msa0383570:intron 25.0%
!! ATGCATAATAATGATTTTGC+CGG + chr3_1:86476742-86476761 None:intergenic 25.0%
! TATGATGAACATTGAATGAA+AGG - chr3_1:86476997-86477016 Msa0383570:intron 25.0%
!! TCTTTTTCTATTTTCAGAAG+AGG - chr3_1:86477722-86477741 Msa0383570:CDS 25.0%
!! CTTTTTCTATTTTCAGAAGA+GGG - chr3_1:86477723-86477742 Msa0383570:CDS 25.0%
! ACTTATTTATTACTTCTTGC+AGG - chr3_1:86478075-86478094 Msa0383570:intron 25.0%
!!! TGATAATGTTGATTTTCTGA+AGG - chr3_1:86478105-86478124 Msa0383570:intron 25.0%
! TTCTTCACTAAACTTATAGT+AGG - chr3_1:86478169-86478188 Msa0383570:CDS 25.0%
!!! AATATGCTTGCTTTTCATTT+TGG - chr3_1:86478635-86478654 Msa0383570:intron 25.0%
!!! TGTGATTTGTTAATGAATGT+AGG - chr3_1:86478738-86478757 Msa0383570:CDS 25.0%
!! CGTAAACTGATTTAAACATT+TGG - chr3_1:86478873-86478892 Msa0383570:intron 25.0%
!! AAATGAAAGCTTTGAGAATG+AGG + chr3_1:86476050-86476069 Msa0383560:intron 30.0%
TAAACACTTGTGAGTTTGAT+TGG + chr3_1:86476508-86476527 Msa0383560:CDS 30.0%
GTTAAGAAAACGTGATATAC+CGG - chr3_1:86476611-86476630 Msa0383570:three_prime_UTR 30.0%
GCATTTGAATATTTGTCTTC+CGG + chr3_1:86476633-86476652 Msa0383560:CDS 30.0%
! TCAAATGCTTTTCTTGGATA+CGG - chr3_1:86476645-86476664 Msa0383570:three_prime_UTR 30.0%
AGTAAGTTCAACTGTAAAAC+TGG + chr3_1:86476682-86476701 Msa0383560:CDS 30.0%
CTTTACAATATCTACTGTCT+TGG + chr3_1:86477107-86477126 None:intergenic 30.0%
CAAGACAGTAGATATTGTAA+AGG - chr3_1:86477105-86477124 Msa0383570:CDS 30.0%
TAGATATTGTAAAGGCGAAA+GGG - chr3_1:86477113-86477132 Msa0383570:CDS 30.0%
!!! TACACTCACTTTTTCATAGA+AGG + chr3_1:86477302-86477321 None:intergenic 30.0%
CTTGTCGTTGTTAATTTCAA+AGG - chr3_1:86477398-86477417 Msa0383570:CDS 30.0%
TTGTTAATTTCAAAGGCTGT+TGG - chr3_1:86477405-86477424 Msa0383570:CDS 30.0%
TCAATCAAAATAGTAATCCC+AGG + chr3_1:86477518-86477537 None:intergenic 30.0%
ACTAACTATGACAAAGGAAA+TGG - chr3_1:86477678-86477697 Msa0383570:intron 30.0%
! TAAGTTTAGTGAAGAAGTGT+AGG + chr3_1:86478165-86478184 None:intergenic 30.0%
TAAACTTATAGTAGGCTACT+AGG - chr3_1:86478177-86478196 Msa0383570:CDS 30.0%
CTTCATATATAGTGATTGGA+GGG + chr3_1:86478243-86478262 None:intergenic 30.0%
!!! GACTATATCTGCCATTTTAT+AGG - chr3_1:86478515-86478534 Msa0383570:intron 30.0%
TTAAGGTATGGCCTATAAAA+TGG + chr3_1:86478529-86478548 None:intergenic 30.0%
TGTTACTGTAAGCAATGTTA+AGG + chr3_1:86478546-86478565 None:intergenic 30.0%
TGAAGTCATTGTTACAAACA+TGG - chr3_1:86478926-86478945 Msa0383570:intron 30.0%
TAGAAATGAACTCAGTTTGT+AGG - chr3_1:86479194-86479213 Msa0383570:five_prime_UTR 30.0%
ACTAACTGCAGCATTAACAT+AGG - chr3_1:86475835-86475854 Msa0383570:three_prime_UTR 35.0%
TGTAGCAGATGGTAACATTA+AGG + chr3_1:86475912-86475931 Msa0383560:intron 35.0%
GCTGCATTTGGTTATTCATT+TGG - chr3_1:86476128-86476147 Msa0383570:three_prime_UTR 35.0%
AGACCAAAACTTGGTTAACT+GGG - chr3_1:86476246-86476265 Msa0383570:three_prime_UTR 35.0%
CTACATGTTGTATACAAGGT+TGG - chr3_1:86476292-86476311 Msa0383570:intron 35.0%
TGTATACAAGGTTGGAGATT+TGG - chr3_1:86476300-86476319 Msa0383570:intron 35.0%
AGTTTGATTGGAAGAGCTTA+TGG + chr3_1:86476496-86476515 Msa0383560:CDS 35.0%
CTCACAAGTGTTTATGTAAG+TGG - chr3_1:86476514-86476533 Msa0383570:three_prime_UTR 35.0%
! CAAATGCTTTTCTTGGATAC+GGG - chr3_1:86476646-86476665 Msa0383570:three_prime_UTR 35.0%
ACTGTAAAACTGGAATCTTC+AGG + chr3_1:86476672-86476691 Msa0383560:CDS 35.0%
CGAAATAGCAACTATGATGA+GGG + chr3_1:86476799-86476818 None:intergenic 35.0%
!! TCATCATAGTTGCTATTTCG+CGG - chr3_1:86476799-86476818 Msa0383570:three_prime_UTR 35.0%
GATAACTATGACATTGGAAC+TGG - chr3_1:86476842-86476861 Msa0383570:three_prime_UTR 35.0%
!! TATGACATTGGAACTGGTTT+TGG - chr3_1:86476848-86476867 Msa0383570:three_prime_UTR 35.0%
GTAGATATTGTAAAGGCGAA+AGG - chr3_1:86477112-86477131 Msa0383570:CDS 35.0%
AGATATTGTAAAGGCGAAAG+GGG - chr3_1:86477114-86477133 Msa0383570:CDS 35.0%
ATAACCACTAGGATCTTCAA+CGG + chr3_1:86477194-86477213 None:intergenic 35.0%
TTGAAGATCCTAGTGGTTAT+AGG - chr3_1:86477194-86477213 Msa0383570:intron 35.0%
! TGGTTATAGGTTTGAGCTTT+TGG - chr3_1:86477207-86477226 Msa0383570:intron 35.0%
! TAGTTGTTACCTTTTCCTCA+GGG + chr3_1:86477458-86477477 None:intergenic 35.0%
GAAAAGGTAACAACTACTTG+TGG - chr3_1:86477462-86477481 Msa0383570:intron 35.0%
GTGGTTATTAATCAGATGCA+TGG - chr3_1:86477481-86477500 Msa0383570:intron 35.0%
AAATAGTAATCCCAGGAACA+CGG + chr3_1:86477511-86477530 None:intergenic 35.0%
!! TTATACGTCAGTTCTAGAAC+AGG + chr3_1:86477648-86477667 None:intergenic 35.0%
CTAGAACTGACGTATAACTA+CGG - chr3_1:86477651-86477670 Msa0383570:intron 35.0%
CATGCATTATACATTCATGG+AGG + chr3_1:86477779-86477798 None:intergenic 35.0%
CGACATGCATTATACATTCA+TGG + chr3_1:86477782-86477801 None:intergenic 35.0%
GTGTTTGAACAGATTGCTAT+AGG - chr3_1:86477823-86477842 Msa0383570:CDS 35.0%
GTCTAAGCAAACAACAATCT+TGG + chr3_1:86477938-86477957 None:intergenic 35.0%
!!! TGTTGATTTTCTGAAGGAAC+TGG - chr3_1:86478111-86478130 Msa0383570:intron 35.0%
CCTTCATATATAGTGATTGG+AGG + chr3_1:86478244-86478263 None:intergenic 35.0%
CCTCCAATCACTATATATGA+AGG - chr3_1:86478241-86478260 Msa0383570:intron 35.0%
CCTCCTTCATATATAGTGAT+TGG + chr3_1:86478247-86478266 None:intergenic 35.0%
CCAATCACTATATATGAAGG+AGG - chr3_1:86478244-86478263 Msa0383570:intron 35.0%
TCACTATATATGAAGGAGGA+AGG - chr3_1:86478248-86478267 Msa0383570:intron 35.0%
CACTATATATGAAGGAGGAA+GGG - chr3_1:86478249-86478268 Msa0383570:intron 35.0%
ATTTGAATGCGGAAGTAAAG+AGG + chr3_1:86478391-86478410 None:intergenic 35.0%
!! GGCAAAAAGAGAGCATATTT+TGG + chr3_1:86478441-86478460 None:intergenic 35.0%
AAAATGGCAGATATAGTCAC+CGG + chr3_1:86478513-86478532 None:intergenic 35.0%
CTGTAAGCAATGTTAAGGTA+TGG + chr3_1:86478541-86478560 None:intergenic 35.0%
ATGAAAAGCAAGCATATTGC+AGG + chr3_1:86478633-86478652 None:intergenic 35.0%
CTATTCAACACAATGACTAC+AGG + chr3_1:86478667-86478686 None:intergenic 35.0%
ACAAATCACACACGAGTTAT+TGG + chr3_1:86478728-86478747 None:intergenic 35.0%
CTTCTCAAACGTACAAGAAA+AGG + chr3_1:86478970-86478989 None:intergenic 35.0%
TGTCAAGATGTTTGCTTCTT+TGG - chr3_1:86479020-86479039 Msa0383570:CDS 35.0%
ACGTGGCACTATAATAACGT+AGG - chr3_1:86475782-86475801 Msa0383570:three_prime_UTR 40.0%
TAGGAGATCCAAGACATGTT+TGG - chr3_1:86475801-86475820 Msa0383570:three_prime_UTR 40.0%
AGATCCAAGACATGTTTGGT+CGG - chr3_1:86475805-86475824 Msa0383570:three_prime_UTR 40.0%
GGTCTTAATGTTGTAGCAGA+TGG + chr3_1:86475923-86475942 Msa0383560:intron 40.0%
GTGATGCTACAACTACAACA+AGG + chr3_1:86475944-86475963 Msa0383560:CDS 40.0%
ATTCTTCGTGAAGATGACGA+TGG + chr3_1:86475968-86475987 Msa0383560:CDS 40.0%
!! TGAAAGCTTTGAGAATGAGG+TGG + chr3_1:86476047-86476066 Msa0383560:intron 40.0%
CTACCACAATCCCAATTACT+CGG - chr3_1:86476160-86476179 Msa0383570:three_prime_UTR 40.0%
! TCCTTTTCCACCGAGTAATT+GGG + chr3_1:86476173-86476192 Msa0383560:intron 40.0%
! ATCCTTTTCCACCGAGTAAT+TGG + chr3_1:86476174-86476193 Msa0383560:intron 40.0%
!! AACCAAGTTTTGGTCTGGTT+GGG + chr3_1:86476242-86476261 Msa0383560:intron 40.0%
!! TAACCAAGTTTTGGTCTGGT+TGG + chr3_1:86476243-86476262 Msa0383560:intron 40.0%
!! CAGTTAACCAAGTTTTGGTC+TGG + chr3_1:86476247-86476266 Msa0383560:intron 40.0%
CAGACCAAAACTTGGTTAAC+TGG - chr3_1:86476245-86476264 Msa0383570:three_prime_UTR 40.0%
AGATTCTACACTGAATGCCT+TGG - chr3_1:86476579-86476598 Msa0383570:three_prime_UTR 40.0%
TTCTTAACAGCTTCATGCCA+AGG + chr3_1:86476599-86476618 Msa0383560:CDS 40.0%
! GAGGGAGAATTTTGTGTAAG+TGG + chr3_1:86476781-86476800 None:intergenic 40.0%
GCGAAATAGCAACTATGATG+AGG + chr3_1:86476800-86476819 None:intergenic 40.0%
GGAGTGGATAACTATGACAT+TGG - chr3_1:86476836-86476855 Msa0383570:three_prime_UTR 40.0%
!!! GGAACTGGTTTTGGTCATTT+TGG - chr3_1:86476857-86476876 Msa0383570:three_prime_UTR 40.0%
! GTTTTATACTGCGCTTTTGC+AGG - chr3_1:86477078-86477097 Msa0383570:CDS 40.0%
GATATTGTAAAGGCGAAAGG+GGG - chr3_1:86477115-86477134 Msa0383570:CDS 40.0%
GAAAGGTTACAAGAGAACCA+GGG - chr3_1:86477137-86477156 Msa0383570:CDS 40.0%
AGCTCAAACCTATAACCACT+AGG + chr3_1:86477205-86477224 None:intergenic 40.0%
! CGAAGCATCACTTTGCATAA+GGG + chr3_1:86477253-86477272 None:intergenic 40.0%
! TCGAAGCATCACTTTGCATA+AGG + chr3_1:86477254-86477273 None:intergenic 40.0%
TAGATGCAAACACATGCAAG+AGG - chr3_1:86477363-86477382 Msa0383570:CDS 40.0%
! GTAGTTGTTACCTTTTCCTC+AGG + chr3_1:86477459-86477478 None:intergenic 40.0%
TGAACAGATTGCTATAGGCA+CGG - chr3_1:86477828-86477847 Msa0383570:CDS 40.0%
GCAGAAGCAATCAAATCATG+TGG - chr3_1:86477868-86477887 Msa0383570:CDS 40.0%
!! TTGGTGTTGATACCAGGTAA+GGG + chr3_1:86477919-86477938 None:intergenic 40.0%
!! ACAATCTTGGTGTTGATACC+AGG + chr3_1:86477925-86477944 None:intergenic 40.0%
ATACCAATTTCCAACCATCG+GGG + chr3_1:86477960-86477979 None:intergenic 40.0%
CATACCAATTTCCAACCATC+GGG + chr3_1:86477961-86477980 None:intergenic 40.0%
CCATACCAATTTCCAACCAT+CGG + chr3_1:86477962-86477981 None:intergenic 40.0%
GATACAGAGGTTAACACAGT+AGG + chr3_1:86478029-86478048 None:intergenic 40.0%
AAACAATGAGCGAGATACAG+AGG + chr3_1:86478042-86478061 None:intergenic 40.0%
TTCAGTATGTTACATTGGCG+CGG - chr3_1:86478322-86478341 Msa0383570:intron 40.0%
! GACAAACAGTTCTGGTTAGA+GGG + chr3_1:86478369-86478388 None:intergenic 40.0%
GTAAAGAGGACAAACAGTTC+TGG + chr3_1:86478377-86478396 None:intergenic 40.0%
CAATAACAGGAGTTCTTCAC+TGG + chr3_1:86478819-86478838 None:intergenic 40.0%
TACTACGATTCCAACTGTTG+AGG + chr3_1:86479061-86479080 None:intergenic 40.0%
GATCCAAGACATGTTTGGTC+GGG - chr3_1:86475806-86475825 Msa0383570:three_prime_UTR 45.0%
CTCTTTCATCTTCTCACCAC+TGG - chr3_1:86475992-86476011 Msa0383570:three_prime_UTR 45.0%
TTTCATCTTCTCACCACTGG+TGG - chr3_1:86475995-86476014 Msa0383570:three_prime_UTR 45.0%
GAGATTACCAATACCACCAG+TGG + chr3_1:86476011-86476030 Msa0383560:CDS 45.0%
! TCCCAATTACTCGGTGGAAA+AGG - chr3_1:86476169-86476188 Msa0383570:three_prime_UTR 45.0%
! GGACCCAGTTAACCAAGTTT+TGG + chr3_1:86476252-86476271 Msa0383560:intron 45.0%
TTCGCGGTGATTGCAGATTA+TGG - chr3_1:86476815-86476834 Msa0383570:three_prime_UTR 45.0%
GGTGATTGCAGATTATGGAG+TGG - chr3_1:86476820-86476839 Msa0383570:three_prime_UTR 45.0%
GGAAAGGTTACAAGAGAACC+AGG - chr3_1:86477136-86477155 Msa0383570:CDS 45.0%
TGCAAAGTGATGCTTCGAGT+AGG - chr3_1:86477256-86477275 Msa0383570:intron 45.0%
AGAAGGCTATGACACGATCA+TGG + chr3_1:86477285-86477304 None:intergenic 45.0%
GATAGACAACCCTGAGGAAA+AGG - chr3_1:86477446-86477465 Msa0383570:intron 45.0%
TCAGTACACAGTAGCCAAGT+TGG - chr3_1:86477599-86477618 Msa0383570:intron 45.0%
CAGTACACAGTAGCCAAGTT+GGG - chr3_1:86477600-86477619 Msa0383570:intron 45.0%
! ACAGTAGCCAAGTTGGGATA+TGG - chr3_1:86477606-86477625 Msa0383570:intron 45.0%
TTCAGGACCATATCCCAACT+TGG + chr3_1:86477616-86477635 None:intergenic 45.0%
GGATATGGTCCTGAAGCTAA+TGG - chr3_1:86477621-86477640 Msa0383570:intron 45.0%
! AGAACAGGACCATTAGCTTC+AGG + chr3_1:86477633-86477652 None:intergenic 45.0%
GGCGTCACTAACTATGACAA+AGG - chr3_1:86477672-86477691 Msa0383570:intron 45.0%
CAAAGGAAATGGCTATGCAC+AGG - chr3_1:86477689-86477708 Msa0383570:intron 45.0%
!! CTTGGTGTTGATACCAGGTA+AGG + chr3_1:86477920-86477939 None:intergenic 45.0%
CCGATGGTTGGAAATTGGTA+TGG - chr3_1:86477959-86477978 Msa0383570:intron 45.0%
GAACTGGAGTGACAATAGCA+TGG - chr3_1:86478127-86478146 Msa0383570:intron 45.0%
! GGACAAACAGTTCTGGTTAG+AGG + chr3_1:86478370-86478389 None:intergenic 45.0%
GGAAGGGAAAAGGAAGACAA+CGG + chr3_1:86478462-86478481 None:intergenic 45.0%
! GTTGTCTTCCTTTTCCCTTC+CGG - chr3_1:86478461-86478480 Msa0383570:intron 45.0%
! TTGTCTTCCTTTTCCCTTCC+GGG - chr3_1:86478462-86478481 Msa0383570:intron 45.0%
AGCAAACATCTTGACAGCAC+TGG + chr3_1:86479016-86479035 None:intergenic 45.0%
AACTAAATGGCAGCATTGCG+AGG + chr3_1:86479126-86479145 None:intergenic 45.0%
ACACCCGACCAAACATGTCT+TGG + chr3_1:86475812-86475831 Msa0383560:intron 50.0%
CTTCTCACCACTGGTGGTAT+TGG - chr3_1:86476001-86476020 Msa0383570:three_prime_UTR 50.0%
TCTTCTGCTGCTGCTGCATT+TGG - chr3_1:86476116-86476135 Msa0383570:three_prime_UTR 50.0%
CCACCGAGTAATTGGGATTG+TGG + chr3_1:86476166-86476185 Msa0383560:intron 50.0%
CCACAATCCCAATTACTCGG+TGG - chr3_1:86476163-86476182 Msa0383570:three_prime_UTR 50.0%
TGCCCAACCAGACCAAAACT+TGG - chr3_1:86476237-86476256 Msa0383570:three_prime_UTR 50.0%
TGTAAAGGCGAAAGGGGGAA+AGG - chr3_1:86477120-86477139 Msa0383570:CDS 50.0%
AGAGAACCAGGGTCTGTCAA+AGG - chr3_1:86477148-86477167 Msa0383570:CDS 50.0%
GCTTCCGTTGAAGATCCTAG+TGG - chr3_1:86477187-86477206 Msa0383570:intron 50.0%
TTGCATAAGGGTTCGCGAGT+AGG + chr3_1:86477241-86477260 None:intergenic 50.0%
CCTCAGGGTTGTCTATCTTG+TGG + chr3_1:86477443-86477462 None:intergenic 50.0%
CCACAAGATAGACAACCCTG+AGG - chr3_1:86477440-86477459 Msa0383570:intron 50.0%
GCGAAGATTATCCGTGAACC+TGG - chr3_1:86477892-86477911 Msa0383570:CDS 50.0%
TTGATACCAGGTAAGGGTCC+AGG + chr3_1:86477913-86477932 None:intergenic 50.0%
GTTGTTTGCTTAGACCCCGA+TGG - chr3_1:86477943-86477962 Msa0383570:intron 50.0%
TTTGCTTAGACCCCGATGGT+TGG - chr3_1:86477947-86477966 Msa0383570:intron 50.0%
AGACCCCGATGGTTGGAAAT+TGG - chr3_1:86477954-86477973 Msa0383570:intron 50.0%
CGCGGCAATTCAACATGTAC+TGG - chr3_1:86478340-86478359 Msa0383570:CDS 50.0%
! CTGGACTGTGTCTTTAGAGG+AGG + chr3_1:86478997-86479016 None:intergenic 50.0%
GCACTGGACTGTGTCTTTAG+AGG + chr3_1:86479000-86479019 None:intergenic 50.0%
CCAACTGTTGAGGAGAAGTG+CGG + chr3_1:86479051-86479070 None:intergenic 50.0%
! TGAAGGCACGTCTGGAGAAA+GGG + chr3_1:86479092-86479111 None:intergenic 50.0%
! TTGAAGGCACGTCTGGAGAA+AGG + chr3_1:86479093-86479112 None:intergenic 50.0%
!! TGCTACTTTGAAGGCACGTC+TGG + chr3_1:86479100-86479119 None:intergenic 50.0%
GAGCTACCTTTGACAGACCC+TGG + chr3_1:86477157-86477176 None:intergenic 55.0%
TGCATGGCTATCCGTGTTCC+TGG - chr3_1:86477497-86477516 Msa0383570:intron 55.0%
GCATGGCTATCCGTGTTCCT+GGG - chr3_1:86477498-86477517 Msa0383570:intron 55.0%
CAGGTAAGGGTCCAGGTTCA+CGG + chr3_1:86477906-86477925 None:intergenic 55.0%
TGTGCAGCGATATCCCAGCT+TGG + chr3_1:86478488-86478507 None:intergenic 55.0%
TGGGATATCGCTGCACACTC+CGG - chr3_1:86478491-86478510 Msa0383570:intron 55.0%
CCGCACTTCTCCTCAACAGT+TGG - chr3_1:86479048-86479067 Msa0383570:CDS 55.0%
!! GCGAGGAGCTGCTACTTTGA+AGG + chr3_1:86479109-86479128 None:intergenic 55.0%
CGTGAACCTGGACCCTTACC+TGG - chr3_1:86477904-86477923 Msa0383570:CDS 60.0%
AGCTTGGCCCGGAAGGGAAA+AGG + chr3_1:86478472-86478491 None:intergenic 60.0%
! TTTTCCCTTCCGGGCCAAGC+TGG - chr3_1:86478471-86478490 Msa0383570:intron 60.0%
TTTCCCTTCCGGGCCAAGCT+GGG - chr3_1:86478472-86478491 Msa0383570:intron 60.0%
TATCCCAGCTTGGCCCGGAA+GGG + chr3_1:86478478-86478497 None:intergenic 60.0%
ATATCCCAGCTTGGCCCGGA+AGG + chr3_1:86478479-86478498 None:intergenic 60.0%
AGCGATATCCCAGCTTGGCC+CGG + chr3_1:86478483-86478502 None:intergenic 60.0%
GCACGTCTGGAGAAAGGGCT+TGG + chr3_1:86479087-86479106 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 86475778 86479254 86475778 ID=Msa0383570;Name=Msa0383570
chr3_1 mRNA 86475778 86479254 86475778 ID=Msa0383570-mRNA-1;Parent=Msa0383570;Name=Msa0383570-mRNA-1;_AED=0.24;_eAED=0.24;_QI=121|1|1|1|0.88|0.8|10|933|347
chr3_1 exon 86475778 86476272 86475778 ID=Msa0383570-mRNA-1:exon:22892;Parent=Msa0383570-mRNA-1
chr3_1 exon 86476456 86476935 86476456 ID=Msa0383570-mRNA-1:exon:22891;Parent=Msa0383570-mRNA-1
chr3_1 exon 86477057 86477197 86477057 ID=Msa0383570-mRNA-1:exon:22890;Parent=Msa0383570-mRNA-1
chr3_1 exon 86477322 86477429 86477322 ID=Msa0383570-mRNA-1:exon:22889;Parent=Msa0383570-mRNA-1
chr3_1 exon 86477565 86477612 86477565 ID=Msa0383570-mRNA-1:exon:22888;Parent=Msa0383570-mRNA-1
chr3_1 exon 86477720 86477932 86477720 ID=Msa0383570-mRNA-1:exon:22887;Parent=Msa0383570-mRNA-1
chr3_1 exon 86478137 86478201 86478137 ID=Msa0383570-mRNA-1:exon:22886;Parent=Msa0383570-mRNA-1
chr3_1 exon 86478327 86478451 86478327 ID=Msa0383570-mRNA-1:exon:22885;Parent=Msa0383570-mRNA-1
chr3_1 exon 86478697 86478874 86478697 ID=Msa0383570-mRNA-1:exon:22884;Parent=Msa0383570-mRNA-1
chr3_1 exon 86479010 86479254 86479010 ID=Msa0383570-mRNA-1:exon:22883;Parent=Msa0383570-mRNA-1
chr3_1 five_prime_UTR 86479134 86479254 86479134 ID=Msa0383570-mRNA-1:five_prime_utr;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86479010 86479133 86479010 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86478697 86478874 86478697 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86478327 86478451 86478327 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86478137 86478201 86478137 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86477720 86477932 86477720 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86477565 86477612 86477565 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86477322 86477429 86477322 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86477057 86477197 86477057 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 CDS 86476894 86476935 86476894 ID=Msa0383570-mRNA-1:cds;Parent=Msa0383570-mRNA-1
chr3_1 three_prime_UTR 86476456 86476893 86476456 ID=Msa0383570-mRNA-1:three_prime_utr;Parent=Msa0383570-mRNA-1
chr3_1 three_prime_UTR 86475778 86476272 86475778 ID=Msa0383570-mRNA-1:three_prime_utr;Parent=Msa0383570-mRNA-1
Gene Sequence

>Msa0383570

ATGATCTCATCCTTAATGTTACCATCTGCTACAACATTAAGACCTTGTTGTAGTTGTAGCATCACTCCATCGTCATCTTCACGAAGAATTGCTCTCTTTCATCTTCTCACCACTGGTGGTATTGCTCTACCACAATCCCAATTACTCGGTGGAAAAGGATCAGAATTGTTCAAATTAGCAAAGGCTAATGCTGCAGTAAATCTTGCCCAACCAGACCAAAACTTGGTTAACTGGGTCCAAAATGATAATAGAAGATTTCTACATGTTGTATACAAGGTTGGAGATTTGGACAAGACTATAAAATTCTACACTGAATGCCTTGGCATGAAGCTGTTAAGAAAACGTGATATACCGGAAGACAAATATTCAAATGCTTTTCTTGGATACGGGCCTGAAGATTCCAGTTTTACAGTTGAACTTACTTATAATTATGGAGTGGATAACTATGACATTGGAACTGGTTTTGGTCATTTTGGTATTATAGCTGAAGATGTTTCCAAGACAGTAGATATTGTAAAGGCGAAAGGGGGAAAGGTTACAAGAGAACCAGGGTCTGTCAAAGGTAGCTCTATAGTAACTGCTTCCGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTGGAGAAAAGACCTACTCGCGAACCCTTATGCAAAGTGATGCTTCGAGTAGGCGACCATGATCGTGTCATAGCCTTCTATGAAAAAGCTGTTGGCATGAAACTTCTCCACAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCCAAGTTGGGATATGGTCCTGAAGCTAATGGTCCTGTTCTAGAACTGACGTATAACTACGGCGTCACTAACTATGACAAAGGAAATGGCTATGCACAGATTGCTATAGGCACGGATGATGTCTATAAGACTGCAGAAGCAATCAAATCATGTGGAGCGAAGATTATCCGTGAACCTGGACCCTTACCTGGTATCAACACCAAGATTGTTGTTTGCTTAGACCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAACTGGAGTGA

Protein sequence

>Msa0383570

MISSLMLPSATTLRPCCSCSITPSSSSRRIALFHLLTTGGIALPQSQLLGGKGSELFKLAKANAAVNLAQPDQNLVNWVQNDNRRFLHVVYKVGDLDKTIKFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEDSSFTVELTYNYGVDNYDIGTGFGHFGIIAEDVSKTVDIVKAKGGKVTREPGSVKGSSIVTASVEDPSGYRFELLEKRPTREPLCKVMLRVGDHDRVIAFYEKAVGMKLLHKIDNPEEKYTVAKLGYGPEANGPVLELTYNYGVTNYDKGNGYAQIAIGTDDVYKTAEAIKSCGAKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE*