Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450130 | sp|Q9M2Z5|FBL53_ARATH | 68.562 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 1.37e-151 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450130 | A0A396JYJ5 | 99.344 | 305 | 2 | 0 | 1 | 305 | 58 | 362 | 0.0 | 621 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015370 | Msa1450130 | -0.807859 | 4.113177e-50 | -8.615850e-47 |
| Msa0018870 | Msa1450130 | -0.842987 | 1.847844e-58 | -8.615850e-47 |
| Msa0027540 | Msa1450130 | -0.815784 | 7.740433e-52 | -8.615850e-47 |
| Msa0032040 | Msa1450130 | -0.806505 | 7.964061e-50 | -8.615850e-47 |
| Msa0036580 | Msa1450130 | 0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0038350 | Msa1450130 | 0.815500 | 8.957170e-52 | -8.615850e-47 |
| Msa0039270 | Msa1450130 | 0.874047 | 9.163838e-68 | -8.615850e-47 |
| Msa0043240 | Msa1450130 | 0.820331 | 7.258119e-53 | -8.615850e-47 |
| Msa0043960 | Msa1450130 | 0.812004 | 5.271815e-51 | -8.615850e-47 |
| Msa0049990 | Msa1450130 | -0.801564 | 8.485204e-49 | -8.615850e-47 |
| Msa0072910 | Msa1450130 | -0.801195 | 1.009617e-48 | -8.615850e-47 |
| Msa0075310 | Msa1450130 | -0.819343 | 1.220456e-52 | -8.615850e-47 |
| Msa0090620 | Msa1450130 | 0.825709 | 4.043612e-54 | -8.615850e-47 |
| Msa0092660 | Msa1450130 | -0.802686 | 4.987117e-49 | -8.615850e-47 |
| Msa1344940 | Msa1450130 | -0.825402 | 4.781308e-54 | -8.615850e-47 |
| Msa1352290 | Msa1450130 | -0.835723 | 1.421415e-56 | -8.615850e-47 |
| Msa1361090 | Msa1450130 | -0.819488 | 1.131418e-52 | -8.615850e-47 |
| Msa1367600 | Msa1450130 | -0.804796 | 1.819242e-49 | -8.615850e-47 |
| Msa1368730 | Msa1450130 | -0.839695 | 1.358533e-57 | -8.615850e-47 |
| Msa1369900 | Msa1450130 | -0.827854 | 1.242701e-54 | -8.615850e-47 |
| Msa1373910 | Msa1450130 | -0.801209 | 1.003013e-48 | -8.615850e-47 |
| Msa1374810 | Msa1450130 | -0.838427 | 2.895177e-57 | -8.615850e-47 |
| Msa1375630 | Msa1450130 | -0.802109 | 6.556609e-49 | -8.615850e-47 |
| Msa1376530 | Msa1450130 | -0.803993 | 2.673462e-49 | -8.615850e-47 |
| Msa1376640 | Msa1450130 | -0.817773 | 2.771288e-52 | -8.615850e-47 |
| Msa1379250 | Msa1450130 | 0.819483 | 1.134100e-52 | -8.615850e-47 |
| Msa1400700 | Msa1450130 | 0.869823 | 2.320218e-66 | -8.615850e-47 |
| Msa1404370 | Msa1450130 | -0.805086 | 1.581597e-49 | -8.615850e-47 |
| Msa1407210 | Msa1450130 | 0.829915 | 3.939534e-55 | -8.615850e-47 |
| Msa1407710 | Msa1450130 | -0.828809 | 7.311691e-55 | -8.615850e-47 |
| Msa1408190 | Msa1450130 | -0.800779 | 1.227926e-48 | -8.615850e-47 |
| Msa1410170 | Msa1450130 | -0.816090 | 6.614051e-52 | -8.615850e-47 |
| Msa1423550 | Msa1450130 | -0.824368 | 8.381796e-54 | -8.615850e-47 |
| Msa1428420 | Msa1450130 | -0.802055 | 6.726838e-49 | -8.615850e-47 |
| Msa1428990 | Msa1450130 | -0.821458 | 3.995110e-53 | -8.615850e-47 |
| Msa1442300 | Msa1450130 | -0.812098 | 5.029935e-51 | -8.615850e-47 |
| Msa1448990 | Msa1450130 | -0.801867 | 7.351509e-49 | -8.615850e-47 |
| Msa1449600 | Msa1450130 | -0.812210 | 4.754588e-51 | -8.615850e-47 |
| Msa1450130 | Msa1451840 | -0.835373 | 1.742404e-56 | -8.615850e-47 |
| Msa0604700 | Msa1450130 | -0.804605 | 1.993510e-49 | -8.615850e-47 |
| Msa0607300 | Msa1450130 | -0.806448 | 8.184106e-50 | -8.615850e-47 |
| Msa0660880 | Msa1450130 | 0.816013 | 6.880567e-52 | -8.615850e-47 |
| Msa0690350 | Msa1450130 | -0.802884 | 4.538505e-49 | -8.615850e-47 |
| Msa0703760 | Msa1450130 | -0.813278 | 2.775072e-51 | -8.615850e-47 |
| Msa0707780 | Msa1450130 | -0.837495 | 5.025339e-57 | -8.615850e-47 |
| Msa0716600 | Msa1450130 | 0.827336 | 1.655053e-54 | -8.615850e-47 |
| Msa0730180 | Msa1450130 | -0.832004 | 1.210187e-55 | -8.615850e-47 |
| Msa0733000 | Msa1450130 | -0.804227 | 2.389919e-49 | -8.615850e-47 |
| Msa0747500 | Msa1450130 | 0.805160 | 1.526303e-49 | -8.615850e-47 |
| Msa0757990 | Msa1450130 | 0.832851 | 7.465389e-56 | -8.615850e-47 |
| Msa0758000 | Msa1450130 | 0.815549 | 8.734479e-52 | -8.615850e-47 |
| Msa0770430 | Msa1450130 | -0.802253 | 6.123606e-49 | -8.615850e-47 |
| Msa0797220 | Msa1450130 | -0.826641 | 2.426945e-54 | -8.615850e-47 |
| Msa0799290 | Msa1450130 | 0.811258 | 7.660821e-51 | -8.615850e-47 |
| Msa0837510 | Msa1450130 | 0.808484 | 3.027174e-50 | -8.615850e-47 |
| Msa0121080 | Msa1450130 | -0.804200 | 2.421904e-49 | -8.615850e-47 |
| Msa0123170 | Msa1450130 | -0.812389 | 4.346316e-51 | -8.615850e-47 |
| Msa0125230 | Msa1450130 | -0.807034 | 6.156466e-50 | -8.615850e-47 |
| Msa0129270 | Msa1450130 | 0.808614 | 2.840149e-50 | -8.615850e-47 |
| Msa0131390 | Msa1450130 | -0.819993 | 8.673944e-53 | -8.615850e-47 |
| Msa0139050 | Msa1450130 | -0.806577 | 7.689792e-50 | -8.615850e-47 |
| Msa0147990 | Msa1450130 | -0.831097 | 2.025005e-55 | -8.615850e-47 |
| Msa0149500 | Msa1450130 | -0.806036 | 9.995140e-50 | -8.615850e-47 |
| Msa0168100 | Msa1450130 | -0.808673 | 2.758646e-50 | -8.615850e-47 |
| Msa0177490 | Msa1450130 | -0.820960 | 5.202887e-53 | -8.615850e-47 |
| Msa0182310 | Msa1450130 | 0.815272 | 1.006636e-51 | -8.615850e-47 |
| Msa0184320 | Msa1450130 | 0.803448 | 3.469568e-49 | -8.615850e-47 |
| Msa0194570 | Msa1450130 | -0.803131 | 4.036394e-49 | -8.615850e-47 |
| Msa0197900 | Msa1450130 | -0.810332 | 1.215007e-50 | -8.615850e-47 |
| Msa0207000 | Msa1450130 | -0.804802 | 1.813740e-49 | -8.615850e-47 |
| Msa0213650 | Msa1450130 | -0.808650 | 2.791101e-50 | -8.615850e-47 |
| Msa0217470 | Msa1450130 | -0.805951 | 1.041895e-49 | -8.615850e-47 |
| Msa0222070 | Msa1450130 | -0.805105 | 1.567650e-49 | -8.615850e-47 |
| Msa0222120 | Msa1450130 | -0.809105 | 2.230192e-50 | -8.615850e-47 |
| Msa0223390 | Msa1450130 | -0.803828 | 2.893804e-49 | -8.615850e-47 |
| Msa0224960 | Msa1450130 | -0.841122 | 5.753998e-58 | -8.615850e-47 |
| Msa0225010 | Msa1450130 | -0.839672 | 1.377132e-57 | -8.615850e-47 |
| Msa0227290 | Msa1450130 | -0.817384 | 3.391891e-52 | -8.615850e-47 |
| Msa1226600 | Msa1450130 | -0.800184 | 1.623533e-48 | -8.615850e-47 |
| Msa1229050 | Msa1450130 | -0.810251 | 1.264568e-50 | -8.615850e-47 |
| Msa1233770 | Msa1450130 | -0.816263 | 6.050762e-52 | -8.615850e-47 |
| Msa1243860 | Msa1450130 | -0.812946 | 3.281733e-51 | -8.615850e-47 |
| Msa1257030 | Msa1450130 | 0.810828 | 9.493234e-51 | -8.615850e-47 |
| Msa1258770 | Msa1450130 | -0.819970 | 8.781676e-53 | -8.615850e-47 |
| Msa1258940 | Msa1450130 | -0.800292 | 1.543544e-48 | -8.615850e-47 |
| Msa1266710 | Msa1450130 | 0.829336 | 5.449649e-55 | -8.615850e-47 |
| Msa1271490 | Msa1450130 | -0.809952 | 1.467341e-50 | -8.615850e-47 |
| Msa1271510 | Msa1450130 | -0.812447 | 4.220812e-51 | -8.615850e-47 |
| Msa1276080 | Msa1450130 | -0.820871 | 5.455291e-53 | -8.615850e-47 |
| Msa1279340 | Msa1450130 | -0.812665 | 3.782449e-51 | -8.615850e-47 |
| Msa1280020 | Msa1450130 | -0.800685 | 1.283734e-48 | -8.615850e-47 |
| Msa1298740 | Msa1450130 | -0.859866 | 3.074379e-63 | -8.615850e-47 |
| Msa1309360 | Msa1450130 | -0.807243 | 5.558436e-50 | -8.615850e-47 |
| Msa1319440 | Msa1450130 | -0.805819 | 1.110152e-49 | -8.615850e-47 |
| Msa1325980 | Msa1450130 | -0.824830 | 6.525781e-54 | -8.615850e-47 |
| Msa1326000 | Msa1450130 | -0.803384 | 3.577142e-49 | -8.615850e-47 |
| Msa1329290 | Msa1450130 | -0.801494 | 8.768246e-49 | -8.615850e-47 |
| Msa1330280 | Msa1450130 | -0.813522 | 2.453607e-51 | -8.615850e-47 |
| Msa0370180 | Msa1450130 | -0.814632 | 1.395887e-51 | -8.615850e-47 |
| Msa0378390 | Msa1450130 | 0.804918 | 1.715395e-49 | -8.615850e-47 |
| Msa0380310 | Msa1450130 | -0.807748 | 4.344516e-50 | -8.615850e-47 |
| Msa0380360 | Msa1450130 | -0.820529 | 6.538232e-53 | -8.615850e-47 |
| Msa0380420 | Msa1450130 | -0.801826 | 7.497435e-49 | -8.615850e-47 |
| Msa0382500 | Msa1450130 | -0.817637 | 2.974172e-52 | -8.615850e-47 |
| Msa0383570 | Msa1450130 | -0.813286 | 2.764846e-51 | -8.615850e-47 |
| Msa0386390 | Msa1450130 | -0.816886 | 4.387776e-52 | -8.615850e-47 |
| Msa0396970 | Msa1450130 | -0.811731 | 6.045510e-51 | -8.615850e-47 |
| Msa0397000 | Msa1450130 | -0.804317 | 2.289345e-49 | -8.615850e-47 |
| Msa0421100 | Msa1450130 | -0.817191 | 3.747689e-52 | -8.615850e-47 |
| Msa0423360 | Msa1450130 | 0.826621 | 2.453961e-54 | -8.615850e-47 |
| Msa0427590 | Msa1450130 | -0.823628 | 1.250496e-53 | -8.615850e-47 |
| Msa0427740 | Msa1450130 | 0.816486 | 5.395425e-52 | -8.615850e-47 |
| Msa0427970 | Msa1450130 | 0.819221 | 1.301220e-52 | -8.615850e-47 |
| Msa0432390 | Msa1450130 | -0.832933 | 7.123732e-56 | -8.615850e-47 |
| Msa0432680 | Msa1450130 | -0.807870 | 4.092341e-50 | -8.615850e-47 |
| Msa0434630 | Msa1450130 | -0.814608 | 1.412851e-51 | -8.615850e-47 |
| Msa0446480 | Msa1450130 | -0.815816 | 7.614234e-52 | -8.615850e-47 |
| Msa0458790 | Msa1450130 | -0.806959 | 6.386299e-50 | -8.615850e-47 |
| Msa0475740 | Msa1450130 | -0.814060 | 1.866728e-51 | -8.615850e-47 |
| Msa0479790 | Msa1450130 | -0.817220 | 3.692531e-52 | -8.615850e-47 |
| Msa0482020 | Msa1450130 | -0.810968 | 8.854189e-51 | -8.615850e-47 |
| Msa1000470 | Msa1450130 | -0.814437 | 1.541677e-51 | -8.615850e-47 |
| Msa1001780 | Msa1450130 | -0.800839 | 1.194033e-48 | -8.615850e-47 |
| Msa1008320 | Msa1450130 | 0.811932 | 5.467569e-51 | -8.615850e-47 |
| Msa1011210 | Msa1450130 | -0.814012 | 1.913074e-51 | -8.615850e-47 |
| Msa1028460 | Msa1450130 | -0.825204 | 5.325515e-54 | -8.615850e-47 |
| Msa1037060 | Msa1450130 | 0.862598 | 4.523713e-64 | -8.615850e-47 |
| Msa1038320 | Msa1450130 | -0.810141 | 1.335667e-50 | -8.615850e-47 |
| Msa1067430 | Msa1450130 | -0.800895 | 1.162826e-48 | -8.615850e-47 |
| Msa1077940 | Msa1450130 | 0.854585 | 1.115847e-61 | -8.615850e-47 |
| Msa1081850 | Msa1450130 | -0.806536 | 7.844602e-50 | -8.615850e-47 |
| Msa1103110 | Msa1450130 | -0.804550 | 2.047159e-49 | -8.615850e-47 |
| Msa0258670 | Msa1450130 | 0.810255 | 1.262210e-50 | -8.615850e-47 |
| Msa0263620 | Msa1450130 | -0.809167 | 2.162803e-50 | -8.615850e-47 |
| Msa0280140 | Msa1450130 | -0.804584 | 2.013994e-49 | -8.615850e-47 |
| Msa0285740 | Msa1450130 | -0.819501 | 1.123490e-52 | -8.615850e-47 |
| Msa0301460 | Msa1450130 | -0.809586 | 1.758255e-50 | -8.615850e-47 |
| Msa0312780 | Msa1450130 | -0.800165 | 1.638196e-48 | -8.615850e-47 |
| Msa0314790 | Msa1450130 | -0.809556 | 1.784930e-50 | -8.615850e-47 |
| Msa0320540 | Msa1450130 | -0.806541 | 7.824485e-50 | -8.615850e-47 |
| Msa0335890 | Msa1450130 | 0.824680 | 7.079809e-54 | -8.615850e-47 |
| Msa0336270 | Msa1450130 | -0.802268 | 6.081733e-49 | -8.615850e-47 |
| Msa0339860 | Msa1450130 | -0.800074 | 1.709367e-48 | -8.615850e-47 |
| Msa0344070 | Msa1450130 | -0.819735 | 9.934443e-53 | -8.615850e-47 |
| Msa0352200 | Msa1450130 | -0.810531 | 1.100456e-50 | -8.615850e-47 |
| Msa0362840 | Msa1450130 | -0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa1107970 | Msa1450130 | -0.808839 | 2.542957e-50 | -8.615850e-47 |
| Msa1126910 | Msa1450130 | -0.804742 | 1.866331e-49 | -8.615850e-47 |
| Msa1164800 | Msa1450130 | 0.860304 | 2.268341e-63 | -8.615850e-47 |
| Msa1166180 | Msa1450130 | -0.818199 | 2.220674e-52 | -8.615850e-47 |
| Msa1166280 | Msa1450130 | -0.822667 | 2.095284e-53 | -8.615850e-47 |
| Msa1183390 | Msa1450130 | -0.810114 | 1.354105e-50 | -8.615850e-47 |
| Msa1206630 | Msa1450130 | 0.818936 | 1.510745e-52 | -8.615850e-47 |
| Msa1209390 | Msa1450130 | -0.813953 | 1.971825e-51 | -8.615850e-47 |
| Msa1209650 | Msa1450130 | -0.818377 | 2.022998e-52 | -8.615850e-47 |
| Msa1214900 | Msa1450130 | -0.820327 | 7.274350e-53 | -8.615850e-47 |
| Msa1219780 | Msa1450130 | 0.825439 | 4.684245e-54 | -8.615850e-47 |
| Msa1221570 | Msa1450130 | 0.844776 | 6.131907e-59 | -8.615850e-47 |
| Msa1222030 | Msa1450130 | 0.834308 | 3.230390e-56 | -8.615850e-47 |
| Msa0484240 | Msa1450130 | 0.804091 | 2.550611e-49 | -8.615850e-47 |
| Msa0498320 | Msa1450130 | -0.819942 | 8.910099e-53 | -8.615850e-47 |
| Msa0518160 | Msa1450130 | -0.830424 | 2.960242e-55 | -8.615850e-47 |
| Msa0518570 | Msa1450130 | 0.818556 | 1.842729e-52 | -8.615850e-47 |
| Msa0524050 | Msa1450130 | -0.824065 | 9.875534e-54 | -8.615850e-47 |
| Msa0524120 | Msa1450130 | -0.815209 | 1.039599e-51 | -8.615850e-47 |
| Msa0524510 | Msa1450130 | -0.814704 | 1.345554e-51 | -8.615850e-47 |
| Msa0526640 | Msa1450130 | 0.833247 | 5.952081e-56 | -8.615850e-47 |
| Msa0534380 | Msa1450130 | -0.801032 | 1.090096e-48 | -8.615850e-47 |
| Msa0542040 | Msa1450130 | -0.804762 | 1.849236e-49 | -8.615850e-47 |
| Msa0546380 | Msa1450130 | -0.815483 | 9.034005e-52 | -8.615850e-47 |
| Msa0554170 | Msa1450130 | -0.802365 | 5.808429e-49 | -8.615850e-47 |
| Msa0567290 | Msa1450130 | -0.808148 | 3.571201e-50 | -8.615850e-47 |
| Msa0574170 | Msa1450130 | -0.837219 | 5.913415e-57 | -8.615850e-47 |
| Msa0576420 | Msa1450130 | -0.840933 | 6.449260e-58 | -8.615850e-47 |
| Msa0583930 | Msa1450130 | -0.831812 | 1.349962e-55 | -8.615850e-47 |
| Msa0583940 | Msa1450130 | -0.824911 | 6.244015e-54 | -8.615850e-47 |
| Msa0855020 | Msa1450130 | -0.814252 | 1.693994e-51 | -8.615850e-47 |
| Msa0864150 | Msa1450130 | -0.800921 | 1.148415e-48 | -8.615850e-47 |
| Msa0901140 | Msa1450130 | -0.819637 | 1.046141e-52 | -8.615850e-47 |
| Msa0925160 | Msa1450130 | -0.813651 | 2.298054e-51 | -8.615850e-47 |
| Msa0951060 | Msa1450130 | 0.810356 | 1.200646e-50 | -8.615850e-47 |
| Msa0955260 | Msa1450130 | -0.820767 | 5.764142e-53 | -8.615850e-47 |
| Msa0975910 | Msa1450130 | -0.800260 | 1.566863e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450130 | MtrunA17_Chr1g0203471 | 99.344 | 305 | 2 | 0 | 1 | 305 | 58 | 362 | 0.0 | 621 |
| Msa1450130 | MtrunA17_Chr1g0203481 | 91.475 | 305 | 26 | 0 | 1 | 305 | 1 | 305 | 0.0 | 572 |
| Msa1450130 | MtrunA17_Chr4g0055171 | 48.136 | 295 | 140 | 2 | 12 | 305 | 21 | 303 | 1.72e-97 | 289 |
| Msa1450130 | MtrunA17_Chr1g0203501 | 59.649 | 171 | 65 | 1 | 139 | 305 | 2 | 172 | 4.06e-65 | 202 |
| Msa1450130 | MtrunA17_Chr4g0019981 | 55.952 | 168 | 72 | 2 | 140 | 305 | 1 | 168 | 8.15e-60 | 188 |
| Msa1450130 | MtrunA17_Chr7g0246541 | 34.122 | 296 | 174 | 5 | 17 | 304 | 13 | 295 | 4.70e-44 | 152 |
| Msa1450130 | MtrunA17_Chr1g0159411 | 32.313 | 294 | 193 | 4 | 12 | 304 | 13 | 301 | 8.51e-41 | 144 |
| Msa1450130 | MtrunA17_Chr4g0019991 | 49.038 | 104 | 53 | 0 | 17 | 120 | 25 | 128 | 8.22e-28 | 104 |
| Msa1450130 | MtrunA17_Chr1g0203491 | 48.624 | 109 | 56 | 0 | 12 | 120 | 21 | 129 | 1.76e-27 | 103 |
| Msa1450130 | MtrunA17_Chr7g0245491 | 30.270 | 185 | 125 | 1 | 120 | 304 | 12 | 192 | 6.78e-25 | 99.0 |
| Msa1450130 | MtrunA17_Chr7g0245471 | 31.892 | 185 | 122 | 1 | 120 | 304 | 3 | 183 | 2.78e-24 | 97.1 |
| Msa1450130 | MtrunA17_Chr7g0245461 | 40.367 | 109 | 64 | 1 | 12 | 120 | 13 | 120 | 1.05e-20 | 85.9 |
| Msa1450130 | MtrunA17_Chr7g0245481 | 36.522 | 115 | 72 | 1 | 6 | 120 | 7 | 120 | 2.08e-17 | 76.6 |
| Msa1450130 | MtrunA17_Chr2g0285661 | 29.289 | 239 | 143 | 7 | 4 | 233 | 18 | 239 | 6.69e-17 | 79.7 |
| Msa1450130 | MtrunA17_Chr2g0285641 | 28.151 | 238 | 143 | 7 | 6 | 233 | 23 | 242 | 1.52e-16 | 79.0 |
| Msa1450130 | MtrunA17_Chr8g0382941 | 26.050 | 238 | 157 | 5 | 3 | 232 | 15 | 241 | 3.13e-16 | 77.8 |
| Msa1450130 | MtrunA17_Chr2g0285671 | 27.530 | 247 | 145 | 6 | 4 | 233 | 17 | 246 | 8.96e-14 | 70.9 |
| Msa1450130 | MtrunA17_Chr3g0119481 | 27.193 | 228 | 144 | 5 | 11 | 232 | 13 | 224 | 4.06e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450130 | AT3G48880.2 | 68.562 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 1.40e-152 | 429 |
| Msa1450130 | AT3G48880.1 | 68.562 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 1.40e-152 | 429 |
| Msa1450130 | AT3G48880.3 | 68.562 | 299 | 92 | 2 | 9 | 305 | 11 | 309 | 1.40e-152 | 429 |
| Msa1450130 | AT4G11580.1 | 29.532 | 342 | 188 | 11 | 1 | 303 | 4 | 331 | 8.95e-33 | 124 |
Find 108 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCTTGGTCTCTTGAATT+TGG | 0.151821 | tig0032798:-24717 | Msa1450130:five_prime_UTR |
| TTAAAAGTTCGTATATTTAT+AGG | 0.195021 | tig0032798:+22127 | Msa1450130:intergenic |
| AGGCTCAAGACTCTCAATTT+TGG | 0.223803 | tig0032798:+23199 | Msa1450130:intergenic |
| TTCTTTCACCGAAACTTTAT+AGG | 0.224796 | tig0032798:-22650 | Msa1450130:three_prime_UTR |
| ACAAGTATGAGGAAGGATTT+TGG | 0.237709 | tig0032798:-22925 | Msa1450130:CDS |
| GCAATTTCCTCTAGAAAATA+TGG | 0.237803 | tig0032798:+23304 | Msa1450130:intergenic |
| AGTTCAGAAATGAAAATCTT+TGG | 0.258183 | tig0032798:+22260 | Msa1450130:intergenic |
| CTTGCTGTGATCCACTTCTT+TGG | 0.265127 | tig0032798:-24052 | Msa1450130:CDS |
| CTTCAGTGAACTCAAGATTA+TGG | 0.275898 | tig0032798:-23266 | Msa1450130:CDS |
| GTCCACCCCTTCCACCATTT+TGG | 0.276226 | tig0032798:+22357 | Msa1450130:intergenic |
| TCAAGGAAATCTTCAATAAT+CGG | 0.286560 | tig0032798:+23934 | Msa1450130:intergenic |
| GTTACACTTCTAATGATAAC+AGG | 0.289734 | tig0032798:-22168 | Msa1450130:three_prime_UTR |
| AAATTTGAATGATTACAAAT+TGG | 0.309677 | tig0032798:-22783 | Msa1450130:three_prime_UTR |
| GGGATGAATTGTGCAACTTT+TGG | 0.327736 | tig0032798:+22281 | Msa1450130:intergenic |
| ATTGGAGTTTGTCACCAAAA+TGG | 0.333519 | tig0032798:-22371 | Msa1450130:three_prime_UTR |
| GTGTTGTTGTGCCCTTTAAA+AGG | 0.338855 | tig0032798:-22761 | Msa1450130:three_prime_UTR |
| CGCGCAATCGAGAAGCCTTC+TGG | 0.341689 | tig0032798:+23023 | Msa1450130:intergenic |
| TCTTAAGAATTTCAGAAAAC+AGG | 0.359870 | tig0032798:-24212 | Msa1450130:five_prime_UTR |
| ACGTAAACAAAAGGCTCTAA+TGG | 0.360702 | tig0032798:+23984 | Msa1450130:intergenic |
| GACATATTCGAGTTAACTTC+TGG | 0.361591 | tig0032798:-24107 | Msa1450130:CDS |
| TATATCACATTGCATTCTAA+TGG | 0.362218 | tig0032798:-23104 | Msa1450130:CDS |
| GTTCAGAAATGAAAATCTTT+GGG | 0.376508 | tig0032798:+22261 | Msa1450130:intergenic |
| CTCAAGTTTGATTGATTTGA+GGG | 0.378530 | tig0032798:-22546 | Msa1450130:three_prime_UTR |
| CACTCACGTACAAGTTGAAA+TGG | 0.379756 | tig0032798:+23877 | Msa1450130:intergenic |
| TCTCAAGTTTGATTGATTTG+AGG | 0.380177 | tig0032798:-22547 | Msa1450130:three_prime_UTR |
| AAACTGTTCCTATAAAGTTT+CGG | 0.383190 | tig0032798:+22642 | Msa1450130:intergenic |
| GCATGGAGAATGCCTTGAAC+AGG | 0.383226 | tig0032798:-22306 | Msa1450130:three_prime_UTR |
| TTCGGTGTTCAACGCTATAT+AGG | 0.386217 | tig0032798:-23177 | Msa1450130:CDS |
| CACGAGGAGATGGGAGGATC+TGG | 0.389695 | tig0032798:-24165 | Msa1450130:CDS |
| GTGCTTGAAACTTGTATTAG+TGG | 0.393883 | tig0032798:-22576 | Msa1450130:three_prime_UTR |
| AAATCAAACAAAACAACTCT+TGG | 0.398497 | tig0032798:+24743 | Msa1450130:intergenic |
| GGATCTGGACACAGATATAT+TGG | 0.398991 | tig0032798:-24150 | Msa1450130:CDS |
| TTCAGTGAACTCAAGATTAT+GGG | 0.400982 | tig0032798:-23265 | Msa1450130:CDS |
| AAGTTTCAAGCACAAATATT+CGG | 0.403757 | tig0032798:+22586 | Msa1450130:intergenic |
| AATCAAACAAAACAACTCTT+GGG | 0.413390 | tig0032798:+24744 | Msa1450130:intergenic |
| CTTGGGGACTAAAGAAATCA+TGG | 0.422199 | tig0032798:+24761 | Msa1450130:intergenic |
| TGTGCAAGGCAATCCGTTGC+TGG | 0.424432 | tig0032798:-23369 | Msa1450130:CDS |
| ACTCATTCTGCTCAGATTCA+AGG | 0.426417 | tig0032798:+23917 | Msa1450130:intergenic |
| AATTGAGAGTCTTGAGCCTT+CGG | 0.435748 | tig0032798:-23195 | Msa1450130:CDS |
| CAAGGAAATCTTCAATAATC+GGG | 0.435917 | tig0032798:+23935 | Msa1450130:intergenic |
| GAACTGATGAAGGGATAGTT+AGG | 0.442152 | tig0032798:-22952 | Msa1450130:CDS |
| AACGACTGGTTCTTCCGGCT+TGG | 0.442940 | tig0032798:-23414 | Msa1450130:CDS |
| TTGTTTCGAACACGAGGAGA+TGG | 0.448455 | tig0032798:-24175 | Msa1450130:CDS |
| GCTCAAACGACTGGTTCTTC+CGG | 0.448751 | tig0032798:-23419 | Msa1450130:CDS |
| AGTTAGGTGGTACAAGTATG+AGG | 0.451024 | tig0032798:-22936 | Msa1450130:CDS |
| TGGAACAGAATTAAAAGAAC+AGG | 0.456792 | tig0032798:-23394 | Msa1450130:CDS |
| TTGCTCATGTTTGTAGCGCA+TGG | 0.458078 | tig0032798:-24082 | Msa1450130:CDS |
| TCGGTGTTCAACGCTATATA+GGG | 0.478065 | tig0032798:-23176 | Msa1450130:CDS |
| AACAGAGAATAACGGCGATC+TGG | 0.478367 | tig0032798:-22870 | Msa1450130:three_prime_UTR |
| TATTCTCTGTTTAAAGTGCA+AGG | 0.494057 | tig0032798:+22882 | Msa1450130:intergenic |
| ATTTCAGAAAACAGGCGTAA+TGG | 0.497325 | tig0032798:-24204 | Msa1450130:exon |
| CTTCATCAGTTCTTGTACGT+TGG | 0.501934 | tig0032798:+22963 | Msa1450130:intergenic |
| CTAAATGTTCTAAGCTGTCT+AGG | 0.503752 | tig0032798:+23137 | Msa1450130:intergenic |
| AACGGCGATCTGGTATGGTC+TGG | 0.515550 | tig0032798:-22860 | Msa1450130:three_prime_UTR |
| CGTTCATCAACGTAAACAAA+AGG | 0.517545 | tig0032798:+23975 | Msa1450130:intergenic |
| AGAATAACGGCGATCTGGTA+TGG | 0.517681 | tig0032798:-22865 | Msa1450130:three_prime_UTR |
| GGTTGATCAGAGGAAGTTGG+TGG | 0.522886 | tig0032798:-24696 | Msa1450130:intron |
| GAACCAGTCGTTTGAGCTGT+GGG | 0.524995 | tig0032798:+23425 | Msa1450130:intergenic |
| TGTTTCGAACACGAGGAGAT+GGG | 0.527745 | tig0032798:-24174 | Msa1450130:CDS |
| GCACTTTAAACAGAGAATAA+CGG | 0.527779 | tig0032798:-22878 | Msa1450130:exon |
| AAACACTGGACATGGATCCT+AGG | 0.531617 | tig0032798:-22216 | Msa1450130:three_prime_UTR |
| TGTTTGTAGCGCATGGCGCA+TGG | 0.531694 | tig0032798:-24075 | Msa1450130:CDS |
| TTTGGTTGATCAGAGGAAGT+TGG | 0.535065 | tig0032798:-24699 | Msa1450130:five_prime_UTR |
| ATTCTCTGTTTAAAGTGCAA+GGG | 0.539339 | tig0032798:+22883 | Msa1450130:intergenic |
| TGATTCTACTATTCGCCAGA+AGG | 0.543301 | tig0032798:-23038 | Msa1450130:CDS |
| AGGTGGTACAAGTATGAGGA+AGG | 0.544931 | tig0032798:-22932 | Msa1450130:CDS |
| AATCCGTTGCTGGAAAGAGC+TGG | 0.549877 | tig0032798:-23359 | Msa1450130:CDS |
| CAACGTACAAGAACTGATGA+AGG | 0.552652 | tig0032798:-22962 | Msa1450130:CDS |
| TGTCACCAAAATGGTGGAAG+GGG | 0.554141 | tig0032798:-22362 | Msa1450130:three_prime_UTR |
| TCATATTATGTCCAATGCCT+AGG | 0.558998 | tig0032798:+22199 | Msa1450130:intergenic |
| AGAACCAGTCGTTTGAGCTG+TGG | 0.570755 | tig0032798:+23424 | Msa1450130:intergenic |
| GTAAATGCTAAAACTCAAGA+AGG | 0.571323 | tig0032798:+22505 | Msa1450130:intergenic |
| GCGCGAATTTATCACATGCA+TGG | 0.572175 | tig0032798:-23005 | Msa1450130:CDS |
| ACTCCAGCTCTTTCCAGCAA+CGG | 0.573617 | tig0032798:+23356 | Msa1450130:intergenic |
| TGGACATGGATCCTAGGCAT+TGG | 0.573850 | tig0032798:-22210 | Msa1450130:three_prime_UTR |
| CACCAAAATGGTGGAAGGGG+TGG | 0.578783 | tig0032798:-22359 | Msa1450130:three_prime_UTR |
| TCAAGCGTCTTCCAAAGAAG+TGG | 0.580522 | tig0032798:+24041 | Msa1450130:intergenic |
| CATGGAGAATGCCTTGAACA+GGG | 0.582421 | tig0032798:-22305 | Msa1450130:three_prime_UTR |
| TTGTCACCAAAATGGTGGAA+GGG | 0.586547 | tig0032798:-22363 | Msa1450130:three_prime_UTR |
| TTTGTCACCAAAATGGTGGA+AGG | 0.586600 | tig0032798:-22364 | Msa1450130:three_prime_UTR |
| TTTCCTCTAGAAAATATGGC+GGG | 0.587537 | tig0032798:+23308 | Msa1450130:intergenic |
| GGAGTTTGTCACCAAAATGG+TGG | 0.595934 | tig0032798:-22368 | Msa1450130:three_prime_UTR |
| GGACTAAAGAAATCATGGGT+TGG | 0.597039 | tig0032798:+24766 | Msa1450130:intergenic |
| AATCAAAGGCATAACATGCA+AGG | 0.597892 | tig0032798:-22615 | Msa1450130:three_prime_UTR |
| TCTTGAATTTGGTTGATCAG+AGG | 0.602357 | tig0032798:-24706 | Msa1450130:five_prime_UTR |
| TATGGCGGGTTTGCTATACT+AGG | 0.604329 | tig0032798:+23322 | Msa1450130:intergenic |
| GTGCCCACAGCTCAAACGAC+TGG | 0.606234 | tig0032798:-23428 | Msa1450130:CDS |
| TTAGCATTTACAATAATCTG+TGG | 0.609520 | tig0032798:-22493 | Msa1450130:intron |
| TAAGAAGAATTTCAGCACCA+AGG | 0.610819 | tig0032798:+24230 | Msa1450130:intergenic |
| ATGGAGAATGCCTTGAACAG+GGG | 0.612411 | tig0032798:-22304 | Msa1450130:three_prime_UTR |
| AGAGACACAAACACTGGACA+TGG | 0.614078 | tig0032798:-22224 | Msa1450130:three_prime_UTR |
| TATATAGCGTTGAACACCGA+AGG | 0.621770 | tig0032798:+23179 | Msa1450130:intergenic |
| TCAAGAAGGATTGTATGTGA+AGG | 0.623357 | tig0032798:+22519 | Msa1450130:intergenic |
| TAAAAGAACAGGAATGTGCA+AGG | 0.624054 | tig0032798:-23383 | Msa1450130:CDS |
| AGTTGACATACACTGCTGAA+AGG | 0.630322 | tig0032798:-23848 | Msa1450130:intron |
| AAGACGTTGTTTCGAACACG+AGG | 0.632817 | tig0032798:-24181 | Msa1450130:CDS |
| TTGGGGACTAAAGAAATCAT+GGG | 0.634520 | tig0032798:+24762 | Msa1450130:intergenic |
| TCAAGTTTGATTGATTTGAG+GGG | 0.635870 | tig0032798:-22545 | Msa1450130:three_prime_UTR |
| ATCAAACAAAACAACTCTTG+GGG | 0.638711 | tig0032798:+24745 | Msa1450130:intergenic |
| AAGGCATAACATGCAAGGTG+AGG | 0.650786 | tig0032798:-22610 | Msa1450130:three_prime_UTR |
| TCAGTGAACTCAAGATTATG+GGG | 0.652634 | tig0032798:-23264 | Msa1450130:CDS |
| TTCGAACACGAGGAGATGGG+AGG | 0.657865 | tig0032798:-24171 | Msa1450130:CDS |
| AACGTACAAGAACTGATGAA+GGG | 0.659917 | tig0032798:-22961 | Msa1450130:CDS |
| CTGATGAAGGGATAGTTAGG+TGG | 0.665188 | tig0032798:-22949 | Msa1450130:CDS |
| ATTTCCTCTAGAAAATATGG+CGG | 0.666839 | tig0032798:+23307 | Msa1450130:intergenic |
| TTACACTTCTAATGATAACA+GGG | 0.680263 | tig0032798:-22167 | Msa1450130:three_prime_UTR |
| GAAGCAAAGAAGATGTCACA+TGG | 0.687775 | tig0032798:+23241 | Msa1450130:intergenic |
| ACGTGTAGAGACACAAACAC+TGG | 0.698553 | tig0032798:-22230 | Msa1450130:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAGAATTTTTTGTATT+AGG | - | tig0032798:22451-22470 | Msa1450130:intron | 10.0% |
| !!! | CTCTAAATATATTTTAAAGT+TGG | + | tig0032798:23244-23263 | Msa1450130:intergenic | 15.0% |
| !! | AATATATTTAGAGAGATTAA+TGG | - | tig0032798:23251-23270 | Msa1450130:CDS | 15.0% |
| !!! | TTATTTTTGAAAAGATAATG+CGG | - | tig0032798:23525-23544 | Msa1450130:intron | 15.0% |
| !!! | TTGATAATTTTTTTATGTTG+AGG | + | tig0032798:23997-24016 | Msa1450130:intergenic | 15.0% |
| !! | AAATTTGAATGATTACAAAT+TGG | - | tig0032798:24278-24297 | Msa1450130:intron | 15.0% |
| !! | TTAAAAGTTCGTATATTTAT+AGG | + | tig0032798:24937-24956 | Msa1450130:intergenic | 15.0% |
| !!! | TTGTTTGATTTTTCATATCT+TGG | - | tig0032798:22330-22349 | Msa1450130:three_prime_UTR | 20.0% |
| !!! | ACCACTTATTGTTTTTTTTT+TGG | - | tig0032798:22399-22418 | Msa1450130:intron | 20.0% |
| !! | TCCAAAAAAAAAACAATAAG+TGG | + | tig0032798:22403-22422 | Msa1450130:intergenic | 20.0% |
| !!! | TAGAATTTTTTGTATTAGGA+AGG | - | tig0032798:22455-22474 | Msa1450130:intron | 20.0% |
| !!! | AACTTTAACAGTGTTTTTTT+TGG | - | tig0032798:22563-22582 | Msa1450130:three_prime_UTR | 20.0% |
| !!! | ATTTGTTAATCTCTTAACTT+TGG | - | tig0032798:22675-22694 | Msa1450130:three_prime_UTR | 20.0% |
| !! | TTAAACATAAACCTAAAAAC+TGG | + | tig0032798:22773-22792 | Msa1450130:intergenic | 20.0% |
| !!! | CTTACTTTTTGTCTTAAATT+TGG | - | tig0032798:22794-22813 | Msa1450130:three_prime_UTR | 20.0% |
| !!! | TTTGACGGTTTTTAAATAAA+AGG | + | tig0032798:23356-23375 | Msa1450130:intergenic | 20.0% |
| !!! | TAATTTTTTTATGTTGAGGA+GGG | + | tig0032798:23993-24012 | Msa1450130:intergenic | 20.0% |
| !!! | ATAATTTTTTTATGTTGAGG+AGG | + | tig0032798:23994-24013 | Msa1450130:intergenic | 20.0% |
| !!! | TTTAACAAACTCCTTTTAAA+GGG | + | tig0032798:24314-24333 | Msa1450130:intergenic | 20.0% |
| !!! | ATTTAACAAACTCCTTTTAA+AGG | + | tig0032798:24315-24334 | Msa1450130:intergenic | 20.0% |
| !!! | TTGTATAGAATTGTTATTGA+AGG | - | tig0032798:24646-24665 | Msa1450130:intron | 20.0% |
| !!! | TGTATAGAATTGTTATTGAA+GGG | - | tig0032798:24647-24666 | Msa1450130:intron | 20.0% |
| ! | AATCAAACAAAACAACTCTT+GGG | + | tig0032798:22320-22339 | Msa0198820:intergenic | 25.0% |
| ! | AAATCAAACAAAACAACTCT+TGG | + | tig0032798:22321-22340 | Msa0198820:intergenic | 25.0% |
| !! | TTTTGTATTAGGAAGGATAA+TGG | - | tig0032798:22462-22481 | Msa1450130:intron | 25.0% |
| !!! | TGTTTTTTTTGGAGAGTTTA+TGG | - | tig0032798:22574-22593 | Msa1450130:three_prime_UTR | 25.0% |
| !! | GTTTTACCCTTTGTTAAATT+CGG | - | tig0032798:22712-22731 | Msa1450130:three_prime_UTR | 25.0% |
| !!! | GTCTTAAATTTGGTTTTTGT+AGG | - | tig0032798:22804-22823 | Msa1450130:three_prime_UTR | 25.0% |
| ! | TCTTAAGAATTTCAGAAAAC+AGG | - | tig0032798:22849-22868 | Msa1450130:three_prime_UTR | 25.0% |
| ! | TCAAGGAAATCTTCAATAAT+CGG | + | tig0032798:23130-23149 | Msa1450130:intergenic | 25.0% |
| !!! | TATGCAGTTATTTGTTATGT+TGG | + | tig0032798:23329-23348 | Msa1450130:intergenic | 25.0% |
| ! | TATATCACATTGCATTCTAA+TGG | - | tig0032798:23957-23976 | Msa1450130:CDS | 25.0% |
| !!! | AATTTTTTTATGTTGAGGAG+GGG | + | tig0032798:23992-24011 | Msa1450130:intergenic | 25.0% |
| !!! | TTTTGTGCTCTAAATTTAGT+TGG | - | tig0032798:24364-24383 | Msa1450130:intron | 25.0% |
| ! | AAACTGTTCCTATAAAGTTT+CGG | + | tig0032798:24422-24441 | Msa1450130:intergenic | 25.0% |
| ! | AAGTTTCAAGCACAAATATT+CGG | + | tig0032798:24478-24497 | Msa1450130:intergenic | 25.0% |
| ! | TTAGCATTTACAATAATCTG+TGG | - | tig0032798:24568-24587 | Msa1450130:intron | 25.0% |
| !! | GTATAGAATTGTTATTGAAG+GGG | - | tig0032798:24648-24667 | Msa1450130:intron | 25.0% |
| !! | TATAGAATTGTTATTGAAGG+GGG | - | tig0032798:24649-24668 | Msa1450130:intron | 25.0% |
| ! | GTTCAGAAATGAAAATCTTT+GGG | + | tig0032798:24803-24822 | Msa1450130:intergenic | 25.0% |
| ! | AGTTCAGAAATGAAAATCTT+TGG | + | tig0032798:24804-24823 | Msa1450130:intergenic | 25.0% |
| !! | AGATTTTCATTTCTGAACTA+TGG | - | tig0032798:24805-24824 | Msa1450130:five_prime_UTR | 25.0% |
| ! | TTACACTTCTAATGATAACA+GGG | - | tig0032798:24894-24913 | Msa1450130:five_prime_UTR | 25.0% |
| ATCAAACAAAACAACTCTTG+GGG | + | tig0032798:22319-22338 | Msa0198820:intergenic | 30.0% | |
| ATATCTTGGTCTCTTGAATT+TGG | - | tig0032798:22344-22363 | Msa1450130:three_prime_UTR | 30.0% | |
| !! | TTAGGAAGGATAATGGAATT+TGG | - | tig0032798:22469-22488 | Msa1450130:intron | 30.0% |
| ! | CGTTTTCCGAATTTAACAAA+GGG | + | tig0032798:22721-22740 | Msa1450130:intergenic | 30.0% |
| ! | ACGTTTTCCGAATTTAACAA+AGG | + | tig0032798:22722-22741 | Msa1450130:intergenic | 30.0% |
| CAAGGAAATCTTCAATAATC+GGG | + | tig0032798:23129-23148 | Msa1450130:intergenic | 30.0% | |
| ! | TTATGTTGGTGAGTTCTAAT+TGG | + | tig0032798:23315-23334 | Msa1450130:intergenic | 30.0% |
| ! | GACGGTTTTTAAATAAAAGG+CGG | + | tig0032798:23353-23372 | Msa1450130:intergenic | 30.0% |
| CTAGATTGAAGAATTGTGAT+CGG | - | tig0032798:23385-23404 | Msa1450130:CDS | 30.0% | |
| ! | GATTCAAGTTATGAGATTGA+CGG | + | tig0032798:23458-23477 | Msa1450130:intergenic | 30.0% |
| TTATTAGCACTCCTTCAAAA+TGG | - | tig0032798:23561-23580 | Msa1450130:intron | 30.0% | |
| ! | CATTGTACTATCCATTTTGA+AGG | + | tig0032798:23575-23594 | Msa1450130:intergenic | 30.0% |
| TGGAACAGAATTAAAAGAAC+AGG | - | tig0032798:23667-23686 | Msa1450130:intron | 30.0% | |
| ! | ATTTCCTCTAGAAAATATGG+CGG | + | tig0032798:23757-23776 | Msa1450130:intergenic | 30.0% |
| ! | GCAATTTCCTCTAGAAAATA+TGG | + | tig0032798:23760-23779 | Msa1450130:intergenic | 30.0% |
| TTCAGTGAACTCAAGATTAT+GGG | - | tig0032798:23796-23815 | Msa1450130:intron | 30.0% | |
| !!! | ATTTTTTTATGTTGAGGAGG+GGG | + | tig0032798:23991-24010 | Msa1450130:intergenic | 30.0% |
| ! | ATTCTCTGTTTAAAGTGCAA+GGG | + | tig0032798:24181-24200 | Msa1450130:intergenic | 30.0% |
| ! | TATTCTCTGTTTAAAGTGCA+AGG | + | tig0032798:24182-24201 | Msa1450130:intergenic | 30.0% |
| GCACTTTAAACAGAGAATAA+CGG | - | tig0032798:24183-24202 | Msa1450130:CDS | 30.0% | |
| TTCTTTCACCGAAACTTTAT+AGG | - | tig0032798:24411-24430 | Msa1450130:intron | 30.0% | |
| !!! | GGAACAGTTTTGAAAATCAA+AGG | - | tig0032798:24432-24451 | Msa1450130:intron | 30.0% |
| !! | TCTCAAGTTTGATTGATTTG+AGG | - | tig0032798:24514-24533 | Msa1450130:intron | 30.0% |
| !! | CTCAAGTTTGATTGATTTGA+GGG | - | tig0032798:24515-24534 | Msa1450130:intron | 30.0% |
| !! | TCAAGTTTGATTGATTTGAG+GGG | - | tig0032798:24516-24535 | Msa1450130:intron | 30.0% |
| GTAAATGCTAAAACTCAAGA+AGG | + | tig0032798:24559-24578 | Msa1450130:intergenic | 30.0% | |
| AACAATTCTATACAAGACAG+TGG | + | tig0032798:24641-24660 | Msa1450130:intergenic | 30.0% | |
| !!! | TTGTGTTTTAGGAGCATAAT+TGG | - | tig0032798:24672-24691 | Msa1450130:intron | 30.0% |
| ! | CTTTTCTTTGTAAACAAGCA+TGG | - | tig0032798:24738-24757 | Msa1450130:five_prime_UTR | 30.0% |
| GTTACACTTCTAATGATAAC+AGG | - | tig0032798:24893-24912 | Msa1450130:five_prime_UTR | 30.0% | |
| TTGGGGACTAAAGAAATCAT+GGG | + | tig0032798:22302-22321 | Msa0198820:intergenic | 35.0% | |
| TCTTGAATTTGGTTGATCAG+AGG | - | tig0032798:22355-22374 | Msa1450130:three_prime_UTR | 35.0% | |
| ! | ATGCTTCTACTCCAGTTTTT+AGG | - | tig0032798:22759-22778 | Msa1450130:three_prime_UTR | 35.0% |
| TAAGAAGAATTTCAGCACCA+AGG | + | tig0032798:22834-22853 | Msa1450130:intergenic | 35.0% | |
| ATTTCAGAAAACAGGCGTAA+TGG | - | tig0032798:22857-22876 | Msa1450130:three_prime_UTR | 35.0% | |
| ! | GACATATTCGAGTTAACTTC+TGG | - | tig0032798:22954-22973 | Msa1450130:CDS | 35.0% |
| ! | ACGTAAACAAAAGGCTCTAA+TGG | + | tig0032798:23080-23099 | Msa1450130:intergenic | 35.0% |
| CGTTCATCAACGTAAACAAA+AGG | + | tig0032798:23089-23108 | Msa1450130:intergenic | 35.0% | |
| AGTGTAAAACAACTTTCCAC+TGG | + | tig0032798:23287-23306 | Msa1450130:intergenic | 35.0% | |
| ATCTAGCGAATCATGTTTGA+CGG | + | tig0032798:23371-23390 | Msa1450130:intergenic | 35.0% | |
| ! | AAGAATTGTGATCGGTTCAT+CGG | - | tig0032798:23393-23412 | Msa1450130:CDS | 35.0% |
| ! | AGGGGTGAGATTAGTTATTT+AGG | + | tig0032798:23605-23624 | Msa1450130:intergenic | 35.0% |
| !! | CTTTTAATTCTGTTCCAAGC+CGG | + | tig0032798:23664-23683 | Msa1450130:intergenic | 35.0% |
| TAAAAGAACAGGAATGTGCA+AGG | - | tig0032798:23678-23697 | Msa1450130:intron | 35.0% | |
| ! | TTTCCTCTAGAAAATATGGC+GGG | + | tig0032798:23756-23775 | Msa1450130:intergenic | 35.0% |
| CTTCAGTGAACTCAAGATTA+TGG | - | tig0032798:23795-23814 | Msa1450130:intron | 35.0% | |
| TCAGTGAACTCAAGATTATG+GGG | - | tig0032798:23797-23816 | Msa1450130:intron | 35.0% | |
| ! | CTAAATGTTCTAAGCTGTCT+AGG | + | tig0032798:23927-23946 | Msa1450130:intergenic | 35.0% |
| !!! | TTTTTTTATGTTGAGGAGGG+GGG | + | tig0032798:23990-24009 | Msa1450130:intergenic | 35.0% |
| AACGTACAAGAACTGATGAA+GGG | - | tig0032798:24100-24119 | Msa1450130:CDS | 35.0% | |
| ! | ACAAGTATGAGGAAGGATTT+TGG | - | tig0032798:24136-24155 | Msa1450130:CDS | 35.0% |
| !! | AGGATTTTGGAAAGAAGATG+AGG | - | tig0032798:24149-24168 | Msa1450130:CDS | 35.0% |
| ! | GTCTGGTTGTTGAACATTTT+CGG | - | tig0032798:24218-24237 | Msa1450130:five_prime_UTR | 35.0% |
| ! | AATCAAAGGCATAACATGCA+AGG | - | tig0032798:24446-24465 | Msa1450130:intron | 35.0% |
| GTGCTTGAAACTTGTATTAG+TGG | - | tig0032798:24485-24504 | Msa1450130:intron | 35.0% | |
| TCAAGAAGGATTGTATGTGA+AGG | + | tig0032798:24545-24564 | Msa1450130:intergenic | 35.0% | |
| ATTGGAGTTTGTCACCAAAA+TGG | - | tig0032798:24690-24709 | Msa1450130:intron | 35.0% | |
| TCATATTATGTCCAATGCCT+AGG | + | tig0032798:24865-24884 | Msa1450130:intergenic | 35.0% | |
| GGACTAAAGAAATCATGGGT+TGG | + | tig0032798:22298-22317 | Msa0198820:intergenic | 40.0% | |
| CTTGGGGACTAAAGAAATCA+TGG | + | tig0032798:22303-22322 | Msa0198820:intergenic | 40.0% | |
| TTTGGTTGATCAGAGGAAGT+TGG | - | tig0032798:22362-22381 | Msa1450130:three_prime_UTR | 40.0% | |
| GGATCTGGACACAGATATAT+TGG | - | tig0032798:22911-22930 | Msa1450130:CDS | 40.0% | |
| ACTCATTCTGCTCAGATTCA+AGG | + | tig0032798:23147-23166 | Msa1450130:intergenic | 40.0% | |
| ! | CACTCACGTACAAGTTGAAA+TGG | + | tig0032798:23187-23206 | Msa1450130:intergenic | 40.0% |
| AGTTGACATACACTGCTGAA+AGG | - | tig0032798:23213-23232 | Msa1450130:CDS | 40.0% | |
| CTACGAAACATCGTACGAAA+AGG | + | tig0032798:23487-23506 | Msa1450130:intergenic | 40.0% | |
| ! | CTTTTCGTACGATGTTTCGT+AGG | - | tig0032798:23485-23504 | Msa1450130:intron | 40.0% |
| !! | AGGAGTGCTAATAACTAGCA+AGG | + | tig0032798:23555-23574 | Msa1450130:intergenic | 40.0% |
| ! | AAACCCGCCATATTTTCTAG+AGG | - | tig0032798:23750-23769 | Msa1450130:intron | 40.0% |
| GAAGCAAAGAAGATGTCACA+TGG | + | tig0032798:23823-23842 | Msa1450130:intergenic | 40.0% | |
| ! | AGGCTCAAGACTCTCAATTT+TGG | + | tig0032798:23865-23884 | Msa1450130:intergenic | 40.0% |
| AATTGAGAGTCTTGAGCCTT+CGG | - | tig0032798:23866-23885 | Msa1450130:CDS | 40.0% | |
| ! | TATATAGCGTTGAACACCGA+AGG | + | tig0032798:23885-23904 | Msa1450130:intergenic | 40.0% |
| !! | TTCGGTGTTCAACGCTATAT+AGG | - | tig0032798:23884-23903 | Msa1450130:CDS | 40.0% |
| ! | TCGGTGTTCAACGCTATATA+GGG | - | tig0032798:23885-23904 | Msa1450130:CDS | 40.0% |
| TGATTCTACTATTCGCCAGA+AGG | - | tig0032798:24023-24042 | Msa1450130:CDS | 40.0% | |
| CTTCATCAGTTCTTGTACGT+TGG | + | tig0032798:24101-24120 | Msa1450130:intergenic | 40.0% | |
| CAACGTACAAGAACTGATGA+AGG | - | tig0032798:24099-24118 | Msa1450130:CDS | 40.0% | |
| GAACTGATGAAGGGATAGTT+AGG | - | tig0032798:24109-24128 | Msa1450130:CDS | 40.0% | |
| AGTTAGGTGGTACAAGTATG+AGG | - | tig0032798:24125-24144 | Msa1450130:CDS | 40.0% | |
| ! | GTGTTGTTGTGCCCTTTAAA+AGG | - | tig0032798:24300-24319 | Msa1450130:intron | 40.0% |
| ! | ATTGAAGGGGGTTGTGTTTT+AGG | - | tig0032798:24661-24680 | Msa1450130:intron | 40.0% |
| ! | TTTGTCACCAAAATGGTGGA+AGG | - | tig0032798:24697-24716 | Msa1450130:five_prime_UTR | 40.0% |
| ! | TTGTCACCAAAATGGTGGAA+GGG | - | tig0032798:24698-24717 | Msa1450130:five_prime_UTR | 40.0% |
| ! | GGGATGAATTGTGCAACTTT+TGG | + | tig0032798:24783-24802 | Msa1450130:intergenic | 40.0% |
| ! | TGGTTTTTGTAGGCGTTCCT+TGG | - | tig0032798:22814-22833 | Msa1450130:three_prime_UTR | 45.0% |
| ! | AAGACGTTGTTTCGAACACG+AGG | - | tig0032798:22880-22899 | Msa1450130:exon | 45.0% |
| TTGTTTCGAACACGAGGAGA+TGG | - | tig0032798:22886-22905 | Msa1450130:exon | 45.0% | |
| TGTTTCGAACACGAGGAGAT+GGG | - | tig0032798:22887-22906 | Msa1450130:exon | 45.0% | |
| TTGCTCATGTTTGTAGCGCA+TGG | - | tig0032798:22979-22998 | Msa1450130:CDS | 45.0% | |
| ! | CTTGCTGTGATCCACTTCTT+TGG | - | tig0032798:23009-23028 | Msa1450130:CDS | 45.0% |
| TCAAGCGTCTTCCAAAGAAG+TGG | + | tig0032798:23023-23042 | Msa1450130:intergenic | 45.0% | |
| ! | TAATGGATATGCACTGCCAG+TGG | - | tig0032798:23268-23287 | Msa1450130:CDS | 45.0% |
| CGAAACATCGTACGAAAAGG+TGG | + | tig0032798:23484-23503 | Msa1450130:intergenic | 45.0% | |
| !! | TATGGCGGGTTTGCTATACT+AGG | + | tig0032798:23742-23761 | Msa1450130:intergenic | 45.0% |
| GCGCGAATTTATCACATGCA+TGG | - | tig0032798:24056-24075 | Msa1450130:CDS | 45.0% | |
| CTGATGAAGGGATAGTTAGG+TGG | - | tig0032798:24112-24131 | Msa1450130:CDS | 45.0% | |
| AGGTGGTACAAGTATGAGGA+AGG | - | tig0032798:24129-24148 | Msa1450130:CDS | 45.0% | |
| AACAGAGAATAACGGCGATC+TGG | - | tig0032798:24191-24210 | Msa1450130:exon | 45.0% | |
| AGAATAACGGCGATCTGGTA+TGG | - | tig0032798:24196-24215 | Msa1450130:exon | 45.0% | |
| AAGGCATAACATGCAAGGTG+AGG | - | tig0032798:24451-24470 | Msa1450130:intron | 45.0% | |
| GGAGTTTGTCACCAAAATGG+TGG | - | tig0032798:24693-24712 | Msa1450130:intron | 45.0% | |
| ! | TGTCACCAAAATGGTGGAAG+GGG | - | tig0032798:24699-24718 | Msa1450130:five_prime_UTR | 45.0% |
| CATGGAGAATGCCTTGAACA+GGG | - | tig0032798:24756-24775 | Msa1450130:five_prime_UTR | 45.0% | |
| ATGGAGAATGCCTTGAACAG+GGG | - | tig0032798:24757-24776 | Msa1450130:five_prime_UTR | 45.0% | |
| ACGTGTAGAGACACAAACAC+TGG | - | tig0032798:24831-24850 | Msa1450130:five_prime_UTR | 45.0% | |
| AGAGACACAAACACTGGACA+TGG | - | tig0032798:24837-24856 | Msa1450130:five_prime_UTR | 45.0% | |
| AAACACTGGACATGGATCCT+AGG | - | tig0032798:24845-24864 | Msa1450130:five_prime_UTR | 45.0% | |
| GGTTGATCAGAGGAAGTTGG+TGG | - | tig0032798:22365-22384 | Msa1450130:three_prime_UTR | 50.0% | |
| CTAATCTCACCCCTTGTTGC+AGG | - | tig0032798:23611-23630 | Msa1450130:intron | 50.0% | |
| GAACCAGTCGTTTGAGCTGT+GGG | + | tig0032798:23639-23658 | Msa1450130:intergenic | 50.0% | |
| AGAACCAGTCGTTTGAGCTG+TGG | + | tig0032798:23640-23659 | Msa1450130:intergenic | 50.0% | |
| ! | GCTCAAACGACTGGTTCTTC+CGG | - | tig0032798:23642-23661 | Msa1450130:intron | 50.0% |
| AATCCGTTGCTGGAAAGAGC+TGG | - | tig0032798:23702-23721 | Msa1450130:intron | 50.0% | |
| ACTCCAGCTCTTTCCAGCAA+CGG | + | tig0032798:23708-23727 | Msa1450130:intergenic | 50.0% | |
| GCATGGAGAATGCCTTGAAC+AGG | - | tig0032798:24755-24774 | Msa1450130:five_prime_UTR | 50.0% | |
| ! | CAACTTTTGGCCCCTGTTCA+AGG | + | tig0032798:24770-24789 | Msa1450130:intergenic | 50.0% |
| TGGACATGGATCCTAGGCAT+TGG | - | tig0032798:24851-24870 | Msa1450130:five_prime_UTR | 50.0% | |
| TTCGAACACGAGGAGATGGG+AGG | - | tig0032798:22890-22909 | Msa1450130:exon | 55.0% | |
| TGTTTGTAGCGCATGGCGCA+TGG | - | tig0032798:22986-23005 | Msa1450130:CDS | 55.0% | |
| ! | AACGACTGGTTCTTCCGGCT+TGG | - | tig0032798:23647-23666 | Msa1450130:intron | 55.0% |
| TGTGCAAGGCAATCCGTTGC+TGG | - | tig0032798:23692-23711 | Msa1450130:intron | 55.0% | |
| AACGGCGATCTGGTATGGTC+TGG | - | tig0032798:24201-24220 | Msa1450130:exon | 55.0% | |
| ! | CACCAAAATGGTGGAAGGGG+TGG | - | tig0032798:24702-24721 | Msa1450130:five_prime_UTR | 55.0% |
| ! | GTCCACCCCTTCCACCATTT+TGG | + | tig0032798:24707-24726 | Msa1450130:intergenic | 55.0% |
| CACGAGGAGATGGGAGGATC+TGG | - | tig0032798:22896-22915 | Msa1450130:CDS | 60.0% | |
| CTGTGGGCACCTGCAACAAG+GGG | + | tig0032798:23623-23642 | Msa1450130:intergenic | 60.0% | |
| GCTGTGGGCACCTGCAACAA+GGG | + | tig0032798:23624-23643 | Msa1450130:intergenic | 60.0% | |
| AGCTGTGGGCACCTGCAACA+AGG | + | tig0032798:23625-23644 | Msa1450130:intergenic | 60.0% | |
| GTGCCCACAGCTCAAACGAC+TGG | - | tig0032798:23633-23652 | Msa1450130:intron | 60.0% | |
| CGCGCAATCGAGAAGCCTTC+TGG | + | tig0032798:24041-24060 | Msa1450130:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032798 | gene | 22121 | 24962 | 22121 | ID=Msa1450130;Name=Msa1450130 |
| tig0032798 | mRNA | 22121 | 24962 | 22121 | ID=Msa1450130-mRNA-1;Parent=Msa1450130;Name=Msa1450130-mRNA-1;_AED=0.32;_eAED=0.32;_QI=316|1|1|1|0.33|0|4|678|305 |
| tig0032798 | exon | 22121 | 22400 | 22121 | ID=Msa1450130-mRNA-1:exon:17290;Parent=Msa1450130-mRNA-1 |
| tig0032798 | exon | 22494 | 23450 | 22494 | ID=Msa1450130-mRNA-1:exon:17289;Parent=Msa1450130-mRNA-1 |
| tig0032798 | exon | 23849 | 24257 | 23849 | ID=Msa1450130-mRNA-1:exon:17288;Parent=Msa1450130-mRNA-1 |
| tig0032798 | exon | 24697 | 24962 | 24697 | ID=Msa1450130-mRNA-1:exon:17287;Parent=Msa1450130-mRNA-1 |
| tig0032798 | five_prime_UTR | 24697 | 24962 | 24697 | ID=Msa1450130-mRNA-1:five_prime_utr;Parent=Msa1450130-mRNA-1 |
| tig0032798 | five_prime_UTR | 24208 | 24257 | 24208 | ID=Msa1450130-mRNA-1:five_prime_utr;Parent=Msa1450130-mRNA-1 |
| tig0032798 | CDS | 23849 | 24207 | 23849 | ID=Msa1450130-mRNA-1:cds;Parent=Msa1450130-mRNA-1 |
| tig0032798 | CDS | 22892 | 23450 | 22892 | ID=Msa1450130-mRNA-1:cds;Parent=Msa1450130-mRNA-1 |
| tig0032798 | three_prime_UTR | 22494 | 22891 | 22494 | ID=Msa1450130-mRNA-1:three_prime_utr;Parent=Msa1450130-mRNA-1 |
| tig0032798 | three_prime_UTR | 22121 | 22400 | 22121 | ID=Msa1450130-mRNA-1:three_prime_utr;Parent=Msa1450130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
