AlfalfaGEDB | Msa1028830

M. sativa cultivar zhongmu-4 / Msa1028830

KEGG: K13947
GO: GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0009555 GO:0009914 GO:0009926 GO:0009966 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0022857 GO:0023051 GO:0032501 GO:0032502 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046907 GO:0048229 GO:0048583 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0060918 GO:0060919 GO:0065007 GO:0065008 GO:0071944 GO:0080161 GO:0080162
PFAM: PF03547.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028830	XP_003624144.1	98.898	363	4	0	1	363	1	363	0.0	726

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028830	sp\|Q9FFD0\|PIN5_ARATH	69.146	363	100	2	1	363	1	351	0.0	510

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028830	Q673E6	98.898	363	4	0	1	363	1	363	0.0	726

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0610850	Msa1028830	0.836298	1.015921e-56	-8.615850e-47
Msa0622520	Msa1028830	0.916283	2.144875e-85	-8.615850e-47
Msa0651340	Msa1028830	0.844077	9.450345e-59	-8.615850e-47
Msa0693560	Msa1028830	0.849709	2.716811e-60	-8.615850e-47
Msa0722660	Msa1028830	0.804278	2.332212e-49	-8.615850e-47
Msa0223500	Msa1028830	0.814705	1.344598e-51	-8.615850e-47
Msa0477070	Msa1028830	0.813097	3.040784e-51	-8.615850e-47
Msa1018210	Msa1028830	0.802092	6.610994e-49	-8.615850e-47
Msa1028830	Msa1067950	0.915293	6.995555e-85	-8.615850e-47
Msa1028830	Msa1113300	0.907623	4.150637e-81	-8.615850e-47
Msa1028830	Msa1130800	0.802272	6.068696e-49	-8.615850e-47
Msa1028830	Msa1307110	0.818464	1.933627e-52	-8.615850e-47
Msa0259670	Msa1028830	0.824166	9.350697e-54	-8.615850e-47
Msa0264580	Msa1028830	0.820284	7.439670e-53	-8.615850e-47
Msa0295030	Msa1028830	0.819407	1.180156e-52	-8.615850e-47
Msa0339970	Msa1028830	0.819702	1.010857e-52	-8.615850e-47
Msa0341490	Msa1028830	0.800134	1.661679e-48	-8.615850e-47
Msa0362440	Msa1028830	0.802053	6.734143e-49	-8.615850e-47
Msa0493640	Msa1028830	0.801004	1.104705e-48	-8.615850e-47
Msa0521440	Msa1028830	0.804456	2.141901e-49	-8.615850e-47
Msa0578890	Msa1028830	0.843634	1.242184e-58	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028830	MtrunA17_Chr7g0249141	98.898	363	4	0	1	363	1	363	0.0	726
Msa1028830	MtrunA17_Chr7g0216571	39.722	360	210	2	1	359	12	365	3.42e-94	285
Msa1028830	MtrunA17_Chr6g0452821	38.781	361	218	2	1	360	1	359	6.14e-90	274
Msa1028830	MtrunA17_Chr7g0255941	48.876	178	86	1	187	359	412	589	5.08e-54	187
Msa1028830	MtrunA17_Chr7g0255941	46.193	197	94	2	1	188	1	194	1.12e-49	175
Msa1028830	MtrunA17_Chr4g0071571	45.408	196	95	2	169	359	435	623	1.83e-52	183
Msa1028830	MtrunA17_Chr4g0071571	49.359	156	78	1	1	155	1	156	8.20e-48	171
Msa1028830	MtrunA17_Chr4g0044181	49.412	170	81	1	195	359	488	657	4.52e-52	183
Msa1028830	MtrunA17_Chr4g0044181	51.613	155	75	0	1	155	1	155	2.25e-48	173
Msa1028830	MtrunA17_Chr1g0160461	52.632	152	72	0	208	359	468	619	1.68e-51	181
Msa1028830	MtrunA17_Chr1g0160461	51.613	155	75	0	1	155	1	155	1.79e-47	170
Msa1028830	MtrunA17_Chr6g0478431	42.381	210	112	2	159	359	393	602	4.52e-51	179
Msa1028830	MtrunA17_Chr6g0478431	52.903	155	73	0	1	155	1	155	1.22e-49	175
Msa1028830	MtrunA17_Chr4g0071551	43.655	197	100	4	1	188	1	195	4.59e-51	169
Msa1028830	MtrunA17_Chr8g0393111	50.000	156	77	1	1	155	1	156	5.36e-45	162
Msa1028830	MtrunA17_Chr8g0393111	40.541	185	81	3	175	331	334	517	5.16e-38	143
Msa1028830	MtrunA17_Chr1g0159341	48.235	170	83	1	195	359	356	525	1.80e-44	160
Msa1028830	MtrunA17_Chr1g0159341	47.742	155	81	0	1	155	1	155	6.04e-42	153
Msa1028830	MtrunA17_Chr2g0298971	45.806	155	84	0	1	155	1	155	1.25e-42	155
Msa1028830	MtrunA17_Chr2g0298971	36.967	211	99	3	164	340	307	517	7.78e-35	134
Msa1028830	MtrunA17_Chr4g0071561	43.860	171	90	2	169	337	150	316	5.36e-39	141

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1028830	AT5G16530.1	69.146	363	100	2	1	363	1	351	0.0	510
Msa1028830	AT5G16530.2	68.235	340	96	2	1	340	1	328	2.16e-167	470
Msa1028830	AT5G15100.1	36.729	373	218	4	1	361	1	367	2.63e-84	260
Msa1028830	AT5G57090.2	47.027	185	92	2	180	359	362	545	5.78e-55	189
Msa1028830	AT5G57090.2	57.407	54	23	0	102	155	2	55	3.77e-11	64.7
Msa1028830	AT5G57090.1	47.027	185	92	2	180	359	462	645	3.96e-54	189
Msa1028830	AT5G57090.1	51.613	155	75	0	1	155	1	155	7.30e-49	174
Msa1028830	AT2G01420.2	50.000	168	79	1	197	359	447	614	9.00e-53	184
Msa1028830	AT2G01420.2	53.548	155	72	0	1	155	1	155	9.62e-51	179
Msa1028830	AT2G01420.1	50.000	168	79	1	197	359	443	610	9.70e-53	184
Msa1028830	AT2G01420.1	53.548	155	72	0	1	155	1	155	1.10e-50	179
Msa1028830	AT2G01420.3	53.548	155	72	0	1	155	1	155	3.33e-51	178
Msa1028830	AT2G01420.3	42.254	71	36	1	197	262	447	517	2.45e-11	65.5
Msa1028830	AT1G73590.1	45.024	211	97	4	168	359	410	620	1.99e-50	178
Msa1028830	AT1G73590.1	52.258	155	74	0	1	155	1	155	1.55e-48	173
Msa1028830	AT1G70940.1	53.548	155	72	0	1	155	1	155	6.06e-50	177
Msa1028830	AT1G70940.1	50.299	167	78	1	198	359	472	638	6.46e-49	174
Msa1028830	AT1G23080.2	52.903	155	73	0	1	155	1	155	1.09e-49	174
Msa1028830	AT1G23080.2	37.634	93	51	2	175	262	426	516	2.21e-11	65.5
Msa1028830	AT1G23080.3	46.842	190	94	2	175	359	426	613	1.38e-49	176
Msa1028830	AT1G23080.3	52.903	155	73	0	1	155	1	155	3.31e-49	175
Msa1028830	AT1G23080.4	46.842	190	94	2	175	359	426	613	1.38e-49	176
Msa1028830	AT1G23080.4	52.903	155	73	0	1	155	1	155	3.31e-49	175
Msa1028830	AT1G23080.1	46.842	190	94	2	175	359	430	617	1.38e-49	176
Msa1028830	AT1G23080.1	52.903	155	73	0	1	155	1	155	3.35e-49	175
Msa1028830	AT1G77110.1	46.237	186	93	2	179	359	385	568	7.30e-48	171
Msa1028830	AT1G77110.1	47.097	155	82	0	1	155	1	155	4.24e-40	149
Msa1028830	AT1G77110.2	47.097	155	82	0	1	155	1	155	3.89e-40	149
Msa1028830	AT1G77110.2	43.976	166	86	2	179	339	385	548	1.26e-38	145

Find 94 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATGATGCATTTGGATTAC+TGG	0.173929	7_1:-62021223	None:intergenic
ATGACACAACCATAGGAATT+TGG	0.178760	7_1:-62019772	None:intergenic
ATATACATGCAGGTGGAATT+TGG	0.222555	7_1:+62019990	Msa1028830:intron
AATAAGAAGTTCATCTTAAA+AGG	0.233267	7_1:-62019316	None:intergenic
CCTTGAAACCATCGATGTTT+TGG	0.234481	7_1:+62021329	Msa1028830:three_prime_UTR
AAGATGAACTTCTTATTTAT+AGG	0.235002	7_1:+62019322	Msa1028830:CDS
CATGGGCTTTCATATCTAAT+AGG	0.262952	7_1:+62019803	Msa1028830:CDS
TTTACGAATTGCCATAATTC+AGG	0.275399	7_1:+62020370	Msa1028830:CDS
AAAATAAATAACCTGAATTA+TGG	0.285827	7_1:-62020381	None:intergenic
AAACTTAAGGGTTAAAGTTA+AGG	0.291947	7_1:+62021157	Msa1028830:three_prime_UTR
TGTCGCGGTGATTGCCCTTT+GGG	0.292221	7_1:+62019372	Msa1028830:CDS
GGGCACTGCCATGTTTAGTA+TGG	0.309953	7_1:+62020065	Msa1028830:CDS
CGGTTGTTCAAGCTATTATA+TGG	0.310821	7_1:+62019536	Msa1028830:CDS
CTAACAAATTCTCTTGTTGT+TGG	0.319301	7_1:+62019454	Msa1028830:CDS
AATTCCTATGGTTGTGTCAT+TGG	0.321480	7_1:+62019775	Msa1028830:CDS
GTAGCAAAGTAAGTTATTCT+TGG	0.331589	7_1:+62019404	Msa1028830:CDS
GCTATTAGTGCCTTCATTGT+AGG	0.342105	7_1:+62020332	Msa1028830:CDS
CACTTTGCTTCTATTTGTGT+TGG	0.343196	7_1:+62019561	Msa1028830:CDS
GCATATATCCATGATGCATT+TGG	0.343553	7_1:-62021231	None:intergenic
TGACACAACCATAGGAATTT+GGG	0.351513	7_1:-62019771	None:intergenic
ATATGTGTTGTGCAAGAAAT+TGG	0.354441	7_1:+62019053	Msa1028830:five_prime_UTR
GTTGTGTCATTGGCATTTCA+TGG	0.356642	7_1:+62019785	Msa1028830:CDS
GGACCAAGTCTGACTGTATT+TGG	0.359187	7_1:+62020272	Msa1028830:CDS
GGTCTCGACAGGGTGATCTT+TGG	0.371878	7_1:+62021052	Msa1028830:intron
TTGTCGCGGTGATTGCCCTT+TGG	0.372998	7_1:+62019371	Msa1028830:CDS
GCCACACACGCTTCATCAAT+TGG	0.381628	7_1:-62019732	None:intergenic
GAATTTGGAATTGCCAAGTA+TGG	0.381720	7_1:+62020005	Msa1028830:CDS
AACTTAAGGGTTAAAGTTAA+GGG	0.386120	7_1:+62021158	Msa1028830:three_prime_UTR
AGTAGCCTACTACGCAATAT+TGG	0.386249	7_1:+62021099	Msa1028830:CDS
CCAAAACATCGATGGTTTCA+AGG	0.387063	7_1:-62021329	None:intergenic
GTGTTGGAGTTTAGAAGAAC+GGG	0.402783	7_1:+62019577	Msa1028830:CDS
AAGTCTGACTGTATTTGGTT+TGG	0.414306	7_1:+62020277	Msa1028830:CDS
AAACTCCAATATTGCGTAGT+AGG	0.415626	7_1:-62021104	None:intergenic
GGATCTTGTGGTTCAAGCTT+CGG	0.440986	7_1:+62019516	Msa1028830:CDS
CGCTTCATCAATTGGAAGAA+AGG	0.444864	7_1:-62019724	None:intergenic
ATCATGTCAAAGGCTGGAAC+GGG	0.450270	7_1:+62020045	Msa1028830:CDS
TATGATTTCTGTTAGGTAGT+TGG	0.454013	7_1:+62021276	Msa1028830:three_prime_UTR
TTACTAATGCTACTAGCCTT+CGG	0.463777	7_1:-62019628	None:intergenic
GAAACCTATGTATGGACCTA+TGG	0.475019	7_1:+62019489	Msa1028830:CDS
CCAATGGTGAAACCTATGTA+TGG	0.489658	7_1:+62019481	Msa1028830:CDS
GTTTAGAAGAACGGGAATAG+AGG	0.490862	7_1:+62019585	Msa1028830:CDS
ATAGCAAACCCAAATTCCTA+TGG	0.491172	7_1:+62019763	Msa1028830:CDS
ATGAAGGATGTGATGGATTG+TGG	0.492604	7_1:-62020857	None:intergenic
TTTGCACTAATATTAGGCTA+TGG	0.493851	7_1:+62019181	Msa1028830:CDS
TGTGTTGGAGTTTAGAAGAA+CGG	0.506228	7_1:+62019576	Msa1028830:CDS
CCAGTAATCCAAATGCATCA+TGG	0.515621	7_1:+62021223	Msa1028830:three_prime_UTR
GGAATTGCCAAGTATGGTAG+AGG	0.516261	7_1:+62020011	Msa1028830:CDS
TTGTGTCATTGGCATTTCAT+GGG	0.516530	7_1:+62019786	Msa1028830:CDS
ATAGACCCCTCTACCATACT+TGG	0.519190	7_1:-62020018	None:intergenic
GCTACTACACTTAGCCCAAA+GGG	0.523271	7_1:-62019386	None:intergenic
ATATTGATCATGTCAAAGGC+TGG	0.526511	7_1:+62020039	Msa1028830:CDS
ACCTATGGGTGTGGATCTTG+TGG	0.536177	7_1:+62019504	Msa1028830:CDS
GATCATGTCAAAGGCTGGAA+CGG	0.541123	7_1:+62020044	Msa1028830:CDS
GCACTAATAGCCATTGCTGC+TGG	0.549589	7_1:-62020320	None:intergenic
CCATACATAGGTTTCACCAT+TGG	0.550223	7_1:-62019481	None:intergenic
CATTGCTGGACCAGCAGCAA+TGG	0.551223	7_1:+62020310	Msa1028830:CDS
ACCACGCAATCCTACAATGA+AGG	0.552435	7_1:-62020342	None:intergenic
TATTAGGCTATGGTTCTGTA+AGG	0.555934	7_1:+62019191	Msa1028830:CDS
ACTTAAGGGTTAAAGTTAAG+GGG	0.563964	7_1:+62021159	Msa1028830:three_prime_UTR
GTCTATATTGATCATGTCAA+AGG	0.570735	7_1:+62020035	Msa1028830:CDS
GCGTAGTAGGCTACTAAGAT+CGG	0.570919	7_1:-62021091	None:intergenic
TTTAGAAGAACGGGAATAGA+GGG	0.575235	7_1:+62019586	Msa1028830:CDS
TGCTACTACACTTAGCCCAA+AGG	0.578291	7_1:-62019387	None:intergenic
GCTATGGTTCTGTAAGGTGG+TGG	0.583525	7_1:+62019197	Msa1028830:CDS
AGGTGAAGAAAGTAAAGATG+TGG	0.584615	7_1:+62019663	Msa1028830:CDS
GAATTGCCAAGTATGGTAGA+GGG	0.589216	7_1:+62020012	Msa1028830:CDS
TGTGTTGTGCAAGAAATTGG+AGG	0.589694	7_1:+62019056	Msa1028830:five_prime_UTR
GGCACTGCCATGTTTAGTAT+GGG	0.590296	7_1:+62020066	Msa1028830:CDS
GTGAACTCGAAGGCGAAGAG+TGG	0.590300	7_1:-62019280	None:intergenic
GCCTTCATTGTAGGATTGCG+TGG	0.596381	7_1:+62020341	Msa1028830:CDS
TCCAATTGATGAAGCGTGTG+TGG	0.597137	7_1:+62019731	Msa1028830:CDS
CAAGAGAAAGTGATTTCGTG+TGG	0.600700	7_1:+62020251	Msa1028830:CDS
AATATTAGTGCAAAATAGAG+TGG	0.603576	7_1:-62019172	None:intergenic
TCTTGTTGTTGGAATACCAA+TGG	0.606269	7_1:+62019465	Msa1028830:CDS
AAACCTATGTATGGACCTAT+GGG	0.609473	7_1:+62019490	Msa1028830:CDS
CTTAAGGGTTAAAGTTAAGG+GGG	0.611299	7_1:+62021160	Msa1028830:three_prime_UTR
ATTAGTAATGTGACATGTGA+AGG	0.611957	7_1:+62019643	Msa1028830:CDS
CGTCAGAACCAAAACATCGA+TGG	0.613145	7_1:-62021337	None:intergenic
TAGGCTATGGTTCTGTAAGG+TGG	0.613388	7_1:+62019194	Msa1028830:CDS
GTACAAAGTTATTGTAGCAG+TGG	0.621495	7_1:+62019147	Msa1028830:CDS
AAACCAAATACAGTCAGACT+TGG	0.623723	7_1:-62020275	None:intergenic
TATGTATGGACCTATGGGTG+TGG	0.625106	7_1:+62019495	Msa1028830:CDS
ATCAAAGTTAATCATTGTCG+CGG	0.626681	7_1:+62019357	Msa1028830:CDS
TATAAGCACTTTGAAACCGA+AGG	0.636999	7_1:+62019612	Msa1028830:CDS
ACCACAAGATCCACACCCAT+AGG	0.638060	7_1:-62019505	None:intergenic
AAGCTTACCCATACTAAACA+TGG	0.644081	7_1:-62020073	None:intergenic
GAACTTCTTATTTATAGGCG+CGG	0.645236	7_1:+62019327	Msa1028830:CDS
AATGCCAATGACACAACCAT+AGG	0.648775	7_1:-62019779	None:intergenic
TTACGCAGTGCTAAGAACCT+CGG	0.657922	7_1:-62020906	None:intergenic
ACACCCATAGGTCCATACAT+AGG	0.661152	7_1:-62019493	None:intergenic
AGAATACGAACTGCATGCCG+AGG	0.669759	7_1:+62020889	Msa1028830:CDS
AATTGCCAAGTATGGTAGAG+GGG	0.692420	7_1:+62020013	Msa1028830:CDS
GATGTGCGCGGTGAACTCGA+AGG	0.703238	7_1:-62019290	None:intergenic
CTTAAAAGGATCGATGTGCG+CGG	0.711568	7_1:-62019302	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAACTAAAAAAAAATGATT+GGG	+	chr7_1:62019113-62019132	Msa1028830:exon	10.0%
!!	TCAAAAAAAAAATATCTAAT+AGG	+	chr7_1:62019835-62019854	Msa1028830:intron	10.0%
!!!	ATTATATTTTTATGTCTATT+CGG	+	chr7_1:62020820-62020839	Msa1028830:intron	10.0%
!!!	TATATTAATTTTCAAATGTT+TGG	+	chr7_1:62021031-62021050	Msa1028830:intron	10.0%
!!	AAAACTAAAAAAAAATGATT+GGG	+	chr7_1:62019113-62019132	Msa1028830:exon	10.0%
!!	TCAAAAAAAAAATATCTAAT+AGG	+	chr7_1:62019835-62019854	Msa1028830:intron	10.0%
!!!	ATTATATTTTTATGTCTATT+CGG	+	chr7_1:62020820-62020839	Msa1028830:intron	10.0%
!!!	TATATTAATTTTCAAATGTT+TGG	+	chr7_1:62021031-62021050	Msa1028830:intron	10.0%
!!	GAAAACTAAAAAAAAATGAT+TGG	+	chr7_1:62019112-62019131	Msa1028830:exon	15.0%
!!	TATTATTATTAAACATGGTT+AGG	+	chr7_1:62020150-62020169	Msa1028830:intron	15.0%
!!	ATTATTATTAAACATGGTTA+GGG	+	chr7_1:62020151-62020170	Msa1028830:intron	15.0%
!!	AAAATAAATAACCTGAATTA+TGG	-	chr7_1:62020384-62020403	None:intergenic	15.0%
!!!	AATATTTTGTGTGTTTTTAA+AGG	+	chr7_1:62020770-62020789	Msa1028830:intron	15.0%
!!	CATAAAAATATAATTAGATG+AGG	-	chr7_1:62020814-62020833	None:intergenic	15.0%
!!	GAAAACTAAAAAAAAATGAT+TGG	+	chr7_1:62019112-62019131	Msa1028830:exon	15.0%
!!	TATTATTATTAAACATGGTT+AGG	+	chr7_1:62020150-62020169	Msa1028830:intron	15.0%
!!	ATTATTATTAAACATGGTTA+GGG	+	chr7_1:62020151-62020170	Msa1028830:intron	15.0%
!!	AAAATAAATAACCTGAATTA+TGG	-	chr7_1:62020384-62020403	None:intergenic	15.0%
!!!	AATATTTTGTGTGTTTTTAA+AGG	+	chr7_1:62020770-62020789	Msa1028830:intron	15.0%
!!	CATAAAAATATAATTAGATG+AGG	-	chr7_1:62020814-62020833	None:intergenic	15.0%
!!	AATAAGAAGTTCATCTTAAA+AGG	-	chr7_1:62019319-62019338	None:intergenic	20.0%
!!!	AAGATGAACTTCTTATTTAT+AGG	+	chr7_1:62019322-62019341	Msa1028830:CDS	20.0%
!!!	ATACCATTTTTGAAACTTAA+GGG	+	chr7_1:62021145-62021164	Msa1028830:three_prime_UTR	20.0%
!!	AATAAGAAGTTCATCTTAAA+AGG	-	chr7_1:62019319-62019338	None:intergenic	20.0%
!!!	AAGATGAACTTCTTATTTAT+AGG	+	chr7_1:62019322-62019341	Msa1028830:CDS	20.0%
!!!	ATACCATTTTTGAAACTTAA+GGG	+	chr7_1:62021145-62021164	Msa1028830:three_prime_UTR	20.0%
!!	TAGTTTTCTTTTCTTTTGTG+TGG	-	chr7_1:62019100-62019119	None:intergenic	25.0%
!	ACTAAAAAAAAATGATTGGG+TGG	+	chr7_1:62019116-62019135	Msa1028830:exon	25.0%
!	CTAAAAAAAAATGATTGGGT+GGG	+	chr7_1:62019117-62019136	Msa1028830:exon	25.0%
!	AATATTAGTGCAAAATAGAG+TGG	-	chr7_1:62019175-62019194	None:intergenic	25.0%
!!	CTCTATTTTGCACTAATATT+AGG	+	chr7_1:62019175-62019194	Msa1028830:CDS	25.0%
!!	GATTTTGTCTATGCTATAAA+TGG	-	chr7_1:62020467-62020486	None:intergenic	25.0%
!	TTGTCTTTACTAGAAAAAAG+AGG	-	chr7_1:62020489-62020508	None:intergenic	25.0%
!!!	TATTTTTTTACTCCCACAAA+TGG	+	chr7_1:62020718-62020737	Msa1028830:intron	25.0%
!!!	ATTTTTTTACTCCCACAAAT+GGG	+	chr7_1:62020719-62020738	Msa1028830:intron	25.0%
!	GTATTCTTTAGCAAAAATGA+AGG	-	chr7_1:62020876-62020895	None:intergenic	25.0%
!!!	GATACCATTTTTGAAACTTA+AGG	+	chr7_1:62021144-62021163	Msa1028830:three_prime_UTR	25.0%
!	TAACCCTTAAGTTTCAAAAA+TGG	-	chr7_1:62021151-62021170	None:intergenic	25.0%
!	AAACTTAAGGGTTAAAGTTA+AGG	+	chr7_1:62021157-62021176	Msa1028830:three_prime_UTR	25.0%
!	AACTTAAGGGTTAAAGTTAA+GGG	+	chr7_1:62021158-62021177	Msa1028830:three_prime_UTR	25.0%
!!!	TTTTGACTATGATTTCTGTT+AGG	+	chr7_1:62021269-62021288	Msa1028830:three_prime_UTR	25.0%
!!	TAGTTTTCTTTTCTTTTGTG+TGG	-	chr7_1:62019100-62019119	None:intergenic	25.0%
!	ACTAAAAAAAAATGATTGGG+TGG	+	chr7_1:62019116-62019135	Msa1028830:exon	25.0%
!	CTAAAAAAAAATGATTGGGT+GGG	+	chr7_1:62019117-62019136	Msa1028830:exon	25.0%
!	AATATTAGTGCAAAATAGAG+TGG	-	chr7_1:62019175-62019194	None:intergenic	25.0%
!!	CTCTATTTTGCACTAATATT+AGG	+	chr7_1:62019175-62019194	Msa1028830:CDS	25.0%
!!	GATTTTGTCTATGCTATAAA+TGG	-	chr7_1:62020467-62020486	None:intergenic	25.0%
!	TTGTCTTTACTAGAAAAAAG+AGG	-	chr7_1:62020489-62020508	None:intergenic	25.0%
!!!	TATTTTTTTACTCCCACAAA+TGG	+	chr7_1:62020718-62020737	Msa1028830:intron	25.0%
!!!	ATTTTTTTACTCCCACAAAT+GGG	+	chr7_1:62020719-62020738	Msa1028830:intron	25.0%
!	GTATTCTTTAGCAAAAATGA+AGG	-	chr7_1:62020876-62020895	None:intergenic	25.0%
!!!	GATACCATTTTTGAAACTTA+AGG	+	chr7_1:62021144-62021163	Msa1028830:three_prime_UTR	25.0%
!	TAACCCTTAAGTTTCAAAAA+TGG	-	chr7_1:62021151-62021170	None:intergenic	25.0%
!	AAACTTAAGGGTTAAAGTTA+AGG	+	chr7_1:62021157-62021176	Msa1028830:three_prime_UTR	25.0%
!	AACTTAAGGGTTAAAGTTAA+GGG	+	chr7_1:62021158-62021177	Msa1028830:three_prime_UTR	25.0%
!!!	TTTTGACTATGATTTCTGTT+AGG	+	chr7_1:62021269-62021288	Msa1028830:three_prime_UTR	25.0%
	ATATGTGTTGTGCAAGAAAT+TGG	+	chr7_1:62019053-62019072	Msa1028830:five_prime_UTR	30.0%
	TTTGCACTAATATTAGGCTA+TGG	+	chr7_1:62019181-62019200	Msa1028830:CDS	30.0%
	ATCAAAGTTAATCATTGTCG+CGG	+	chr7_1:62019357-62019376	Msa1028830:CDS	30.0%
	GTAGCAAAGTAAGTTATTCT+TGG	+	chr7_1:62019404-62019423	Msa1028830:CDS	30.0%
!	CTAACAAATTCTCTTGTTGT+TGG	+	chr7_1:62019454-62019473	Msa1028830:CDS	30.0%
	ATTAGTAATGTGACATGTGA+AGG	+	chr7_1:62019643-62019662	Msa1028830:CDS	30.0%
	TCTCACATATATATACATGC+AGG	+	chr7_1:62019980-62019999	Msa1028830:intron	30.0%
	GTCTATATTGATCATGTCAA+AGG	+	chr7_1:62020035-62020054	Msa1028830:CDS	30.0%
!	TATATGTGATGTGTTGATAC+AGG	+	chr7_1:62020212-62020231	Msa1028830:intron	30.0%
!	TGTTGATACAGGTATTTTCA+TGG	+	chr7_1:62020223-62020242	Msa1028830:intron	30.0%
!!!	TTGGTTTTAAAGTTCATTGC+TGG	+	chr7_1:62020296-62020315	Msa1028830:CDS	30.0%
	TTTACGAATTGCCATAATTC+AGG	+	chr7_1:62020370-62020389	Msa1028830:CDS	30.0%
!	TTTTGGCAAAAACAAAAGAG+AGG	-	chr7_1:62020515-62020534	None:intergenic	30.0%
!!!	ATAGTTTTTGGCAATGGAAA+TGG	-	chr7_1:62020539-62020558	None:intergenic	30.0%
!!!	TCACAAATAGTTTTTGGCAA+TGG	-	chr7_1:62020545-62020564	None:intergenic	30.0%
!	AATCATATGAGTGATTTGGA+TGG	-	chr7_1:62020604-62020623	None:intergenic	30.0%
	GTTGAATCATATGAGTGATT+TGG	-	chr7_1:62020608-62020627	None:intergenic	30.0%
	TAAAATATTAGCCAACGAAC+GGG	-	chr7_1:62020691-62020710	None:intergenic	30.0%
	CTAAAATATTAGCCAACGAA+CGG	-	chr7_1:62020692-62020711	None:intergenic	30.0%
!!	TTGTGTGTTTTTAAAGGCTT+CGG	+	chr7_1:62020776-62020795	Msa1028830:intron	30.0%
	ACTTAAGGGTTAAAGTTAAG+GGG	+	chr7_1:62021159-62021178	Msa1028830:three_prime_UTR	30.0%
	TATGATTTCTGTTAGGTAGT+TGG	+	chr7_1:62021276-62021295	Msa1028830:three_prime_UTR	30.0%
	AGCTTATTAGCTATAAGCAA+AGG	-	chr7_1:62019033-62019052	None:intergenic	30.0%
	ATATGTGTTGTGCAAGAAAT+TGG	+	chr7_1:62019053-62019072	Msa1028830:five_prime_UTR	30.0%
	TTTGCACTAATATTAGGCTA+TGG	+	chr7_1:62019181-62019200	Msa1028830:CDS	30.0%
	ATCAAAGTTAATCATTGTCG+CGG	+	chr7_1:62019357-62019376	Msa1028830:CDS	30.0%
	GTAGCAAAGTAAGTTATTCT+TGG	+	chr7_1:62019404-62019423	Msa1028830:CDS	30.0%
!	CTAACAAATTCTCTTGTTGT+TGG	+	chr7_1:62019454-62019473	Msa1028830:CDS	30.0%
	ATTAGTAATGTGACATGTGA+AGG	+	chr7_1:62019643-62019662	Msa1028830:CDS	30.0%
	TCTCACATATATATACATGC+AGG	+	chr7_1:62019980-62019999	Msa1028830:intron	30.0%
	GTCTATATTGATCATGTCAA+AGG	+	chr7_1:62020035-62020054	Msa1028830:CDS	30.0%
!	TATATGTGATGTGTTGATAC+AGG	+	chr7_1:62020212-62020231	Msa1028830:intron	30.0%
!	TGTTGATACAGGTATTTTCA+TGG	+	chr7_1:62020223-62020242	Msa1028830:intron	30.0%
!!!	TTGGTTTTAAAGTTCATTGC+TGG	+	chr7_1:62020296-62020315	Msa1028830:CDS	30.0%
	TTTACGAATTGCCATAATTC+AGG	+	chr7_1:62020370-62020389	Msa1028830:CDS	30.0%
!	TTTTGGCAAAAACAAAAGAG+AGG	-	chr7_1:62020515-62020534	None:intergenic	30.0%
!!!	ATAGTTTTTGGCAATGGAAA+TGG	-	chr7_1:62020539-62020558	None:intergenic	30.0%
!!!	TCACAAATAGTTTTTGGCAA+TGG	-	chr7_1:62020545-62020564	None:intergenic	30.0%
!	AATCATATGAGTGATTTGGA+TGG	-	chr7_1:62020604-62020623	None:intergenic	30.0%
	GTTGAATCATATGAGTGATT+TGG	-	chr7_1:62020608-62020627	None:intergenic	30.0%
	TAAAATATTAGCCAACGAAC+GGG	-	chr7_1:62020691-62020710	None:intergenic	30.0%
	CTAAAATATTAGCCAACGAA+CGG	-	chr7_1:62020692-62020711	None:intergenic	30.0%
!!	TTGTGTGTTTTTAAAGGCTT+CGG	+	chr7_1:62020776-62020795	Msa1028830:intron	30.0%
	ACTTAAGGGTTAAAGTTAAG+GGG	+	chr7_1:62021159-62021178	Msa1028830:three_prime_UTR	30.0%
	TATGATTTCTGTTAGGTAGT+TGG	+	chr7_1:62021276-62021295	Msa1028830:three_prime_UTR	30.0%
	GTACAAAGTTATTGTAGCAG+TGG	+	chr7_1:62019147-62019166	Msa1028830:CDS	35.0%
!	TATTAGGCTATGGTTCTGTA+AGG	+	chr7_1:62019191-62019210	Msa1028830:CDS	35.0%
!	GAACTTCTTATTTATAGGCG+CGG	+	chr7_1:62019327-62019346	Msa1028830:CDS	35.0%
!!	TCTTGTTGTTGGAATACCAA+TGG	+	chr7_1:62019465-62019484	Msa1028830:CDS	35.0%
	AAACCTATGTATGGACCTAT+GGG	+	chr7_1:62019490-62019509	Msa1028830:CDS	35.0%
	CGGTTGTTCAAGCTATTATA+TGG	+	chr7_1:62019536-62019555	Msa1028830:CDS	35.0%
	CACTTTGCTTCTATTTGTGT+TGG	+	chr7_1:62019561-62019580	Msa1028830:CDS	35.0%
	TGTGTTGGAGTTTAGAAGAA+CGG	+	chr7_1:62019576-62019595	Msa1028830:CDS	35.0%
	TTTAGAAGAACGGGAATAGA+GGG	+	chr7_1:62019586-62019605	Msa1028830:CDS	35.0%
!!	TATAAGCACTTTGAAACCGA+AGG	+	chr7_1:62019612-62019631	Msa1028830:CDS	35.0%
!!	TTACTAATGCTACTAGCCTT+CGG	-	chr7_1:62019631-62019650	None:intergenic	35.0%
	AGGTGAAGAAAGTAAAGATG+TGG	+	chr7_1:62019663-62019682	Msa1028830:CDS	35.0%
	ATAGCAAACCCAAATTCCTA+TGG	+	chr7_1:62019763-62019782	Msa1028830:CDS	35.0%
	TGACACAACCATAGGAATTT+GGG	-	chr7_1:62019774-62019793	None:intergenic	35.0%
	ATGACACAACCATAGGAATT+TGG	-	chr7_1:62019775-62019794	None:intergenic	35.0%
	AATTCCTATGGTTGTGTCAT+TGG	+	chr7_1:62019775-62019794	Msa1028830:CDS	35.0%
!	TTGTGTCATTGGCATTTCAT+GGG	+	chr7_1:62019786-62019805	Msa1028830:CDS	35.0%
	CATGGGCTTTCATATCTAAT+AGG	+	chr7_1:62019803-62019822	Msa1028830:CDS	35.0%
	ATGTGTGATTAAGTGTGATG+TGG	+	chr7_1:62019957-62019976	Msa1028830:intron	35.0%
	CACATATATATACATGCAGG+TGG	+	chr7_1:62019983-62020002	Msa1028830:intron	35.0%
	ATATACATGCAGGTGGAATT+TGG	+	chr7_1:62019990-62020009	Msa1028830:intron	35.0%
!	GAATTTGGAATTGCCAAGTA+TGG	+	chr7_1:62020005-62020024	Msa1028830:CDS	35.0%
	ATATTGATCATGTCAAAGGC+TGG	+	chr7_1:62020039-62020058	Msa1028830:CDS	35.0%
	AAGCTTACCCATACTAAACA+TGG	-	chr7_1:62020076-62020095	None:intergenic	35.0%
	AAACCAAATACAGTCAGACT+TGG	-	chr7_1:62020278-62020297	None:intergenic	35.0%
	AAGTCTGACTGTATTTGGTT+TGG	+	chr7_1:62020277-62020296	Msa1028830:CDS	35.0%
!	TTGGCAATGGAAATGGTTTT+TGG	-	chr7_1:62020532-62020551	None:intergenic	35.0%
!	CGAGCTTCACAAATAGTTTT+TGG	-	chr7_1:62020551-62020570	None:intergenic	35.0%
!	TATGAGTGATTTGGATGGTA+CGG	-	chr7_1:62020599-62020618	None:intergenic	35.0%
	AAACTCCTAGCATCACTAAA+TGG	+	chr7_1:62020664-62020683	Msa1028830:intron	35.0%
!!	CGTTCGTTGGCTAATATTTT+AGG	+	chr7_1:62020690-62020709	Msa1028830:intron	35.0%
!!	CGTTGGCTAATATTTTAGGA+TGG	+	chr7_1:62020694-62020713	Msa1028830:intron	35.0%
!!!	TTTTTATGTCTATTCGGTGC+AGG	+	chr7_1:62020826-62020845	Msa1028830:intron	35.0%
	AGCAAAAATGAAGGATGTGA+TGG	-	chr7_1:62020867-62020886	None:intergenic	35.0%
	AAACTCCAATATTGCGTAGT+AGG	-	chr7_1:62021107-62021126	None:intergenic	35.0%
	CTTAAGGGTTAAAGTTAAGG+GGG	+	chr7_1:62021160-62021179	Msa1028830:three_prime_UTR	35.0%
	GCATATATCCATGATGCATT+TGG	-	chr7_1:62021234-62021253	None:intergenic	35.0%
	GTACAAAGTTATTGTAGCAG+TGG	+	chr7_1:62019147-62019166	Msa1028830:CDS	35.0%
!	TATTAGGCTATGGTTCTGTA+AGG	+	chr7_1:62019191-62019210	Msa1028830:CDS	35.0%
!	GAACTTCTTATTTATAGGCG+CGG	+	chr7_1:62019327-62019346	Msa1028830:CDS	35.0%
!!	TCTTGTTGTTGGAATACCAA+TGG	+	chr7_1:62019465-62019484	Msa1028830:CDS	35.0%
	AAACCTATGTATGGACCTAT+GGG	+	chr7_1:62019490-62019509	Msa1028830:CDS	35.0%
	CGGTTGTTCAAGCTATTATA+TGG	+	chr7_1:62019536-62019555	Msa1028830:CDS	35.0%
	CACTTTGCTTCTATTTGTGT+TGG	+	chr7_1:62019561-62019580	Msa1028830:CDS	35.0%
	TGTGTTGGAGTTTAGAAGAA+CGG	+	chr7_1:62019576-62019595	Msa1028830:CDS	35.0%
	TTTAGAAGAACGGGAATAGA+GGG	+	chr7_1:62019586-62019605	Msa1028830:CDS	35.0%
!!	TATAAGCACTTTGAAACCGA+AGG	+	chr7_1:62019612-62019631	Msa1028830:CDS	35.0%
!!	TTACTAATGCTACTAGCCTT+CGG	-	chr7_1:62019631-62019650	None:intergenic	35.0%
	AGGTGAAGAAAGTAAAGATG+TGG	+	chr7_1:62019663-62019682	Msa1028830:CDS	35.0%
	ATAGCAAACCCAAATTCCTA+TGG	+	chr7_1:62019763-62019782	Msa1028830:CDS	35.0%
	TGACACAACCATAGGAATTT+GGG	-	chr7_1:62019774-62019793	None:intergenic	35.0%
	ATGACACAACCATAGGAATT+TGG	-	chr7_1:62019775-62019794	None:intergenic	35.0%
	AATTCCTATGGTTGTGTCAT+TGG	+	chr7_1:62019775-62019794	Msa1028830:CDS	35.0%
!	TTGTGTCATTGGCATTTCAT+GGG	+	chr7_1:62019786-62019805	Msa1028830:CDS	35.0%
	CATGGGCTTTCATATCTAAT+AGG	+	chr7_1:62019803-62019822	Msa1028830:CDS	35.0%
	ATGTGTGATTAAGTGTGATG+TGG	+	chr7_1:62019957-62019976	Msa1028830:intron	35.0%
	CACATATATATACATGCAGG+TGG	+	chr7_1:62019983-62020002	Msa1028830:intron	35.0%
	ATATACATGCAGGTGGAATT+TGG	+	chr7_1:62019990-62020009	Msa1028830:intron	35.0%
!	GAATTTGGAATTGCCAAGTA+TGG	+	chr7_1:62020005-62020024	Msa1028830:CDS	35.0%
	ATATTGATCATGTCAAAGGC+TGG	+	chr7_1:62020039-62020058	Msa1028830:CDS	35.0%
	AAGCTTACCCATACTAAACA+TGG	-	chr7_1:62020076-62020095	None:intergenic	35.0%
	AAACCAAATACAGTCAGACT+TGG	-	chr7_1:62020278-62020297	None:intergenic	35.0%
	AAGTCTGACTGTATTTGGTT+TGG	+	chr7_1:62020277-62020296	Msa1028830:CDS	35.0%
!	TTGGCAATGGAAATGGTTTT+TGG	-	chr7_1:62020532-62020551	None:intergenic	35.0%
!	CGAGCTTCACAAATAGTTTT+TGG	-	chr7_1:62020551-62020570	None:intergenic	35.0%
!	TATGAGTGATTTGGATGGTA+CGG	-	chr7_1:62020599-62020618	None:intergenic	35.0%
	AAACTCCTAGCATCACTAAA+TGG	+	chr7_1:62020664-62020683	Msa1028830:intron	35.0%
!!	CGTTCGTTGGCTAATATTTT+AGG	+	chr7_1:62020690-62020709	Msa1028830:intron	35.0%
!!	CGTTGGCTAATATTTTAGGA+TGG	+	chr7_1:62020694-62020713	Msa1028830:intron	35.0%
!!!	TTTTTATGTCTATTCGGTGC+AGG	+	chr7_1:62020826-62020845	Msa1028830:intron	35.0%
	AGCAAAAATGAAGGATGTGA+TGG	-	chr7_1:62020867-62020886	None:intergenic	35.0%
	AAACTCCAATATTGCGTAGT+AGG	-	chr7_1:62021107-62021126	None:intergenic	35.0%
	CTTAAGGGTTAAAGTTAAGG+GGG	+	chr7_1:62021160-62021179	Msa1028830:three_prime_UTR	35.0%
	GCATATATCCATGATGCATT+TGG	-	chr7_1:62021234-62021253	None:intergenic	35.0%
	TGTGTTGTGCAAGAAATTGG+AGG	+	chr7_1:62019056-62019075	Msa1028830:five_prime_UTR	40.0%
	CCATACATAGGTTTCACCAT+TGG	-	chr7_1:62019484-62019503	None:intergenic	40.0%
	CCAATGGTGAAACCTATGTA+TGG	+	chr7_1:62019481-62019500	Msa1028830:CDS	40.0%
	GAAACCTATGTATGGACCTA+TGG	+	chr7_1:62019489-62019508	Msa1028830:CDS	40.0%
	GTGTTGGAGTTTAGAAGAAC+GGG	+	chr7_1:62019577-62019596	Msa1028830:CDS	40.0%
	GTTTAGAAGAACGGGAATAG+AGG	+	chr7_1:62019585-62019604	Msa1028830:CDS	40.0%
	CGCTTCATCAATTGGAAGAA+AGG	-	chr7_1:62019727-62019746	None:intergenic	40.0%
	AATGCCAATGACACAACCAT+AGG	-	chr7_1:62019782-62019801	None:intergenic	40.0%
!	GTTGTGTCATTGGCATTTCA+TGG	+	chr7_1:62019785-62019804	Msa1028830:CDS	40.0%
	GAATTGCCAAGTATGGTAGA+GGG	+	chr7_1:62020012-62020031	Msa1028830:CDS	40.0%
	AATTGCCAAGTATGGTAGAG+GGG	+	chr7_1:62020013-62020032	Msa1028830:CDS	40.0%
	CAAGAGAAAGTGATTTCGTG+TGG	+	chr7_1:62020251-62020270	Msa1028830:CDS	40.0%
	GCTATTAGTGCCTTCATTGT+AGG	+	chr7_1:62020332-62020351	Msa1028830:CDS	40.0%
!!	ATGAAGGATGTGATGGATTG+TGG	-	chr7_1:62020860-62020879	None:intergenic	40.0%
	TTCAAATGTTTGGTCTCGAC+AGG	+	chr7_1:62021041-62021060	Msa1028830:intron	40.0%
	TCAAATGTTTGGTCTCGACA+GGG	+	chr7_1:62021042-62021061	Msa1028830:intron	40.0%
	AGTAGCCTACTACGCAATAT+TGG	+	chr7_1:62021099-62021118	Msa1028830:CDS	40.0%
	CCATGATGCATTTGGATTAC+TGG	-	chr7_1:62021226-62021245	None:intergenic	40.0%
	CCAGTAATCCAAATGCATCA+TGG	+	chr7_1:62021223-62021242	Msa1028830:three_prime_UTR	40.0%
	CCAAAACATCGATGGTTTCA+AGG	-	chr7_1:62021332-62021351	None:intergenic	40.0%
!	CCTTGAAACCATCGATGTTT+TGG	+	chr7_1:62021329-62021348	Msa1028830:three_prime_UTR	40.0%
	TGTGTTGTGCAAGAAATTGG+AGG	+	chr7_1:62019056-62019075	Msa1028830:five_prime_UTR	40.0%
	CCATACATAGGTTTCACCAT+TGG	-	chr7_1:62019484-62019503	None:intergenic	40.0%
	CCAATGGTGAAACCTATGTA+TGG	+	chr7_1:62019481-62019500	Msa1028830:CDS	40.0%
	GAAACCTATGTATGGACCTA+TGG	+	chr7_1:62019489-62019508	Msa1028830:CDS	40.0%
	GTGTTGGAGTTTAGAAGAAC+GGG	+	chr7_1:62019577-62019596	Msa1028830:CDS	40.0%
	GTTTAGAAGAACGGGAATAG+AGG	+	chr7_1:62019585-62019604	Msa1028830:CDS	40.0%
	CGCTTCATCAATTGGAAGAA+AGG	-	chr7_1:62019727-62019746	None:intergenic	40.0%
	AATGCCAATGACACAACCAT+AGG	-	chr7_1:62019782-62019801	None:intergenic	40.0%
!	GTTGTGTCATTGGCATTTCA+TGG	+	chr7_1:62019785-62019804	Msa1028830:CDS	40.0%
	GAATTGCCAAGTATGGTAGA+GGG	+	chr7_1:62020012-62020031	Msa1028830:CDS	40.0%
	AATTGCCAAGTATGGTAGAG+GGG	+	chr7_1:62020013-62020032	Msa1028830:CDS	40.0%
	CAAGAGAAAGTGATTTCGTG+TGG	+	chr7_1:62020251-62020270	Msa1028830:CDS	40.0%
	GCTATTAGTGCCTTCATTGT+AGG	+	chr7_1:62020332-62020351	Msa1028830:CDS	40.0%
!!	ATGAAGGATGTGATGGATTG+TGG	-	chr7_1:62020860-62020879	None:intergenic	40.0%
	TTCAAATGTTTGGTCTCGAC+AGG	+	chr7_1:62021041-62021060	Msa1028830:intron	40.0%
	TCAAATGTTTGGTCTCGACA+GGG	+	chr7_1:62021042-62021061	Msa1028830:intron	40.0%
	AGTAGCCTACTACGCAATAT+TGG	+	chr7_1:62021099-62021118	Msa1028830:CDS	40.0%
	CCATGATGCATTTGGATTAC+TGG	-	chr7_1:62021226-62021245	None:intergenic	40.0%
	CCAGTAATCCAAATGCATCA+TGG	+	chr7_1:62021223-62021242	Msa1028830:three_prime_UTR	40.0%
	CCAAAACATCGATGGTTTCA+AGG	-	chr7_1:62021332-62021351	None:intergenic	40.0%
!	CCTTGAAACCATCGATGTTT+TGG	+	chr7_1:62021329-62021348	Msa1028830:three_prime_UTR	40.0%
!	TAGGCTATGGTTCTGTAAGG+TGG	+	chr7_1:62019194-62019213	Msa1028830:CDS	45.0%
	CTTAAAAGGATCGATGTGCG+CGG	-	chr7_1:62019305-62019324	None:intergenic	45.0%
	GCTACTACACTTAGCCCAAA+GGG	-	chr7_1:62019389-62019408	None:intergenic	45.0%
	TGCTACTACACTTAGCCCAA+AGG	-	chr7_1:62019390-62019409	None:intergenic	45.0%
	ACACCCATAGGTCCATACAT+AGG	-	chr7_1:62019496-62019515	None:intergenic	45.0%
	TATGTATGGACCTATGGGTG+TGG	+	chr7_1:62019495-62019514	Msa1028830:CDS	45.0%
	GGATCTTGTGGTTCAAGCTT+CGG	+	chr7_1:62019516-62019535	Msa1028830:CDS	45.0%
	TCCAATTGATGAAGCGTGTG+TGG	+	chr7_1:62019731-62019750	Msa1028830:CDS	45.0%
	GGAATTGCCAAGTATGGTAG+AGG	+	chr7_1:62020011-62020030	Msa1028830:CDS	45.0%
	ATAGACCCCTCTACCATACT+TGG	-	chr7_1:62020021-62020040	None:intergenic	45.0%
	GATCATGTCAAAGGCTGGAA+CGG	+	chr7_1:62020044-62020063	Msa1028830:CDS	45.0%
	ATCATGTCAAAGGCTGGAAC+GGG	+	chr7_1:62020045-62020064	Msa1028830:CDS	45.0%
	GGCACTGCCATGTTTAGTAT+GGG	+	chr7_1:62020066-62020085	Msa1028830:CDS	45.0%
	GGACCAAGTCTGACTGTATT+TGG	+	chr7_1:62020272-62020291	Msa1028830:CDS	45.0%
	ACCACGCAATCCTACAATGA+AGG	-	chr7_1:62020345-62020364	None:intergenic	45.0%
	GAAACGCTTTGCCCATTTGT+GGG	-	chr7_1:62020733-62020752	None:intergenic	45.0%
	TGAAACGCTTTGCCCATTTG+TGG	-	chr7_1:62020734-62020753	None:intergenic	45.0%
	TTACGCAGTGCTAAGAACCT+CGG	-	chr7_1:62020909-62020928	None:intergenic	45.0%
	GCGTAGTAGGCTACTAAGAT+CGG	-	chr7_1:62021094-62021113	None:intergenic	45.0%
	CGTCAGAACCAAAACATCGA+TGG	-	chr7_1:62021340-62021359	None:intergenic	45.0%
!	TAGGCTATGGTTCTGTAAGG+TGG	+	chr7_1:62019194-62019213	Msa1028830:CDS	45.0%
	CTTAAAAGGATCGATGTGCG+CGG	-	chr7_1:62019305-62019324	None:intergenic	45.0%
	GCTACTACACTTAGCCCAAA+GGG	-	chr7_1:62019389-62019408	None:intergenic	45.0%
	TGCTACTACACTTAGCCCAA+AGG	-	chr7_1:62019390-62019409	None:intergenic	45.0%
	ACACCCATAGGTCCATACAT+AGG	-	chr7_1:62019496-62019515	None:intergenic	45.0%
	TATGTATGGACCTATGGGTG+TGG	+	chr7_1:62019495-62019514	Msa1028830:CDS	45.0%
	GGATCTTGTGGTTCAAGCTT+CGG	+	chr7_1:62019516-62019535	Msa1028830:CDS	45.0%
	TCCAATTGATGAAGCGTGTG+TGG	+	chr7_1:62019731-62019750	Msa1028830:CDS	45.0%
	GGAATTGCCAAGTATGGTAG+AGG	+	chr7_1:62020011-62020030	Msa1028830:CDS	45.0%
	ATAGACCCCTCTACCATACT+TGG	-	chr7_1:62020021-62020040	None:intergenic	45.0%
	GATCATGTCAAAGGCTGGAA+CGG	+	chr7_1:62020044-62020063	Msa1028830:CDS	45.0%
	ATCATGTCAAAGGCTGGAAC+GGG	+	chr7_1:62020045-62020064	Msa1028830:CDS	45.0%
	GGCACTGCCATGTTTAGTAT+GGG	+	chr7_1:62020066-62020085	Msa1028830:CDS	45.0%
	GGACCAAGTCTGACTGTATT+TGG	+	chr7_1:62020272-62020291	Msa1028830:CDS	45.0%
	ACCACGCAATCCTACAATGA+AGG	-	chr7_1:62020345-62020364	None:intergenic	45.0%
	GAAACGCTTTGCCCATTTGT+GGG	-	chr7_1:62020733-62020752	None:intergenic	45.0%
	TGAAACGCTTTGCCCATTTG+TGG	-	chr7_1:62020734-62020753	None:intergenic	45.0%
	TTACGCAGTGCTAAGAACCT+CGG	-	chr7_1:62020909-62020928	None:intergenic	45.0%
	GCGTAGTAGGCTACTAAGAT+CGG	-	chr7_1:62021094-62021113	None:intergenic	45.0%
	CGTCAGAACCAAAACATCGA+TGG	-	chr7_1:62021340-62021359	None:intergenic	45.0%
!!	ATTATTATTATTATTAAACA+TGG	+	chr7_1:62020145-62020164	Msa1028830:intron	5.0%
!!	ATTATTATTATTATTAAACA+TGG	+	chr7_1:62020145-62020164	Msa1028830:intron	5.0%
!	GCTATGGTTCTGTAAGGTGG+TGG	+	chr7_1:62019197-62019216	Msa1028830:CDS	50.0%
	ACCTATGGGTGTGGATCTTG+TGG	+	chr7_1:62019504-62019523	Msa1028830:CDS	50.0%
	ACCACAAGATCCACACCCAT+AGG	-	chr7_1:62019508-62019527	None:intergenic	50.0%
	GCCACACACGCTTCATCAAT+TGG	-	chr7_1:62019735-62019754	None:intergenic	50.0%
!	GGGCACTGCCATGTTTAGTA+TGG	+	chr7_1:62020065-62020084	Msa1028830:CDS	50.0%
	GCACTAATAGCCATTGCTGC+TGG	-	chr7_1:62020323-62020342	None:intergenic	50.0%
	GCCTTCATTGTAGGATTGCG+TGG	+	chr7_1:62020341-62020360	Msa1028830:CDS	50.0%
	CGGGTCCATTTAGTGATGCT+AGG	-	chr7_1:62020672-62020691	None:intergenic	50.0%
	CACTAAATGGACCCGTTCGT+TGG	+	chr7_1:62020677-62020696	Msa1028830:intron	50.0%
	AGAATACGAACTGCATGCCG+AGG	+	chr7_1:62020889-62020908	Msa1028830:CDS	50.0%
!	GCTATGGTTCTGTAAGGTGG+TGG	+	chr7_1:62019197-62019216	Msa1028830:CDS	50.0%
	ACCTATGGGTGTGGATCTTG+TGG	+	chr7_1:62019504-62019523	Msa1028830:CDS	50.0%
	ACCACAAGATCCACACCCAT+AGG	-	chr7_1:62019508-62019527	None:intergenic	50.0%
	GCCACACACGCTTCATCAAT+TGG	-	chr7_1:62019735-62019754	None:intergenic	50.0%
!	GGGCACTGCCATGTTTAGTA+TGG	+	chr7_1:62020065-62020084	Msa1028830:CDS	50.0%
	GCACTAATAGCCATTGCTGC+TGG	-	chr7_1:62020323-62020342	None:intergenic	50.0%
	GCCTTCATTGTAGGATTGCG+TGG	+	chr7_1:62020341-62020360	Msa1028830:CDS	50.0%
	CGGGTCCATTTAGTGATGCT+AGG	-	chr7_1:62020672-62020691	None:intergenic	50.0%
	CACTAAATGGACCCGTTCGT+TGG	+	chr7_1:62020677-62020696	Msa1028830:intron	50.0%
	AGAATACGAACTGCATGCCG+AGG	+	chr7_1:62020889-62020908	Msa1028830:CDS	50.0%
	GTGAACTCGAAGGCGAAGAG+TGG	-	chr7_1:62019283-62019302	None:intergenic	55.0%
	TTGTCGCGGTGATTGCCCTT+TGG	+	chr7_1:62019371-62019390	Msa1028830:CDS	55.0%
	TGTCGCGGTGATTGCCCTTT+GGG	+	chr7_1:62019372-62019391	Msa1028830:CDS	55.0%
	CATTGCTGGACCAGCAGCAA+TGG	+	chr7_1:62020310-62020329	Msa1028830:CDS	55.0%
	GGTCTCGACAGGGTGATCTT+TGG	+	chr7_1:62021052-62021071	Msa1028830:intron	55.0%
	GTGAACTCGAAGGCGAAGAG+TGG	-	chr7_1:62019283-62019302	None:intergenic	55.0%
	TTGTCGCGGTGATTGCCCTT+TGG	+	chr7_1:62019371-62019390	Msa1028830:CDS	55.0%
	TGTCGCGGTGATTGCCCTTT+GGG	+	chr7_1:62019372-62019391	Msa1028830:CDS	55.0%
	CATTGCTGGACCAGCAGCAA+TGG	+	chr7_1:62020310-62020329	Msa1028830:CDS	55.0%
	GGTCTCGACAGGGTGATCTT+TGG	+	chr7_1:62021052-62021071	Msa1028830:intron	55.0%
	GATGTGCGCGGTGAACTCGA+AGG	-	chr7_1:62019293-62019312	None:intergenic	60.0%
	GATGTGCGCGGTGAACTCGA+AGG	-	chr7_1:62019293-62019312	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	62019031	62021413	62019031	ID=Msa1028830;Name=Msa1028830
chr7_1	mRNA	62019031	62021413	62019031	ID=Msa1028830-mRNA-1;Parent=Msa1028830;Name=Msa1028830-mRNA-1;_AED=0.06;_eAED=0.06;_QI=96\|1\|1\|1\|1\|1\|5\|278\|363
chr7_1	exon	62019031	62019824	62019031	ID=Msa1028830-mRNA-1:exon:13146;Parent=Msa1028830-mRNA-1
chr7_1	exon	62020002	62020087	62020002	ID=Msa1028830-mRNA-1:exon:13147;Parent=Msa1028830-mRNA-1
chr7_1	exon	62020234	62020391	62020234	ID=Msa1028830-mRNA-1:exon:13148;Parent=Msa1028830-mRNA-1
chr7_1	exon	62020848	62020924	62020848	ID=Msa1028830-mRNA-1:exon:13149;Parent=Msa1028830-mRNA-1
chr7_1	exon	62021063	62021413	62021063	ID=Msa1028830-mRNA-1:exon:13150;Parent=Msa1028830-mRNA-1
chr7_1	five_prime_UTR	62019031	62019126	62019031	ID=Msa1028830-mRNA-1:five_prime_utr;Parent=Msa1028830-mRNA-1
chr7_1	CDS	62019127	62019824	62019127	ID=Msa1028830-mRNA-1:cds;Parent=Msa1028830-mRNA-1
chr7_1	CDS	62020002	62020087	62020002	ID=Msa1028830-mRNA-1:cds;Parent=Msa1028830-mRNA-1
chr7_1	CDS	62020234	62020391	62020234	ID=Msa1028830-mRNA-1:cds;Parent=Msa1028830-mRNA-1
chr7_1	CDS	62020848	62020924	62020848	ID=Msa1028830-mRNA-1:cds;Parent=Msa1028830-mRNA-1
chr7_1	CDS	62021063	62021135	62021063	ID=Msa1028830-mRNA-1:cds;Parent=Msa1028830-mRNA-1
chr7_1	three_prime_UTR	62021136	62021413	62021136	ID=Msa1028830-mRNA-1:three_prime_utr;Parent=Msa1028830-mRNA-1

Gene Sequence

>Msa1028830

ATGATTGGGTGGGAAGACGTGTACAAAGTTATTGTAGCAGTGGTGCCACTCTATTTTGCACTAATATTAGGCTATGGTTCTGTAAGGTGGTGGAAAATTTTCACAAGAGAACAATGTGATGCAATAAACAAACTAGTTTGTTACTTCACATTGCCACTCTTCGCCTTCGAGTTCACCGCGCACATCGATCCTTTTAAGATGAACTTCTTATTTATAGGCGCGGACACTCTATCAAAGTTAATCATTGTCGCGGTGATTGCCCTTTGGGCTAAGTGTAGTAGCAAAGTAAGTTATTCTTGGTCTATAACAAGTTTCTCTTTGTGTACTCTAACAAATTCTCTTGTTGTTGGAATACCAATGGTGAAACCTATGTATGGACCTATGGGTGTGGATCTTGTGGTTCAAGCTTCGGTTGTTCAAGCTATTATATGGCTCACTTTGCTTCTATTTGTGTTGGAGTTTAGAAGAACGGGAATAGAGGGCACTATAAGCACTTTGAAACCGAAGGCTAGTAGCATTAGTAATGTGACATGTGAAGGTGAAGAAAGTAAAGATGTGGAAGCAAATAACATAGTAGAATATACAAGTAGTAAGCTTCCTTTCTTCCAATTGATGAAGCGTGTGTGGCTCAAATTTATAGCAAACCCAAATTCCTATGGTTGTGTCATTGGCATTTCATGGGCTTTCATATCTAATAGGTGGAATTTGGAATTGCCAAGTATGGTAGAGGGGTCTATATTGATCATGTCAAAGGCTGGAACGGGCACTGCCATGTTTAGTATGGGTATTTTCATGGCACTTCAAGAGAAAGTGATTTCGTGTGGACCAAGTCTGACTGTATTTGGTTTGGTTTTAAAGTTCATTGCTGGACCAGCAGCAATGGCTATTAGTGCCTTCATTGTAGGATTGCGTGGTGACGTTTTACGAATTGCCATAATTCAGGCAGCAGTTCCACAATCCATCACATCCTTCATTTTTGCTAAAGAATACGAACTGCATGCCGAGGTTCTTAGCACTGCGGTGATCTTTGGAATGATTGTTTCACTACCGATCTTAGTAGCCTACTACGCAATATTGGAGTTTGTTCATTGA

Protein sequence

>Msa1028830

MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTAHIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPMVKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFRRTGIEGTISTLKPKASSISNVTCEGEESKDVEANNIVEYTSSKLPFFQLMKRVWLKFIANPNSYGCVIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLSTAVIFGMIVSLPILVAYYAILEFVH*